View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9656_low_63 (Length: 265)

Name: NF9656_low_63
Description: NF9656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9656_low_63
NF9656_low_63
[»] chr2 (38 HSPs)
chr2 (17-244)||(31770283-31770510)
chr2 (102-244)||(20148038-20148180)
chr2 (100-244)||(35491555-35491699)
chr2 (100-244)||(10364779-10364923)
chr2 (98-244)||(37312635-37312781)
chr2 (100-244)||(19471776-19471920)
chr2 (100-244)||(22493191-22493335)
chr2 (100-244)||(16581742-16581886)
chr2 (100-244)||(29906502-29906646)
chr2 (100-244)||(12968444-12968588)
chr2 (100-244)||(39799984-39800128)
chr2 (100-251)||(39393804-39393955)
chr2 (117-244)||(40678774-40678901)
chr2 (98-244)||(17796244-17796390)
chr2 (114-235)||(6976767-6976888)
chr2 (100-244)||(29067650-29067793)
chr2 (100-244)||(42241241-42241385)
chr2 (98-244)||(3937204-3937350)
chr2 (100-244)||(5420389-5420533)
chr2 (100-244)||(10360341-10360485)
chr2 (100-244)||(34521826-34521969)
chr2 (98-241)||(29111081-29111224)
chr2 (98-244)||(17424709-17424855)
chr2 (98-244)||(43982776-43982922)
chr2 (100-244)||(2919507-2919649)
chr2 (100-241)||(3941660-3941801)
chr2 (100-244)||(27130651-27130795)
chr2 (100-244)||(34638886-34639029)
chr2 (100-244)||(42119932-42120076)
chr2 (98-244)||(33403938-33404081)
chr2 (100-227)||(32734584-32734711)
chr2 (98-244)||(6901886-6902032)
chr2 (172-262)||(16706869-16706959)
chr2 (17-97)||(31773014-31773094)
chr2 (184-244)||(22001766-22001826)
chr2 (133-244)||(16253396-16253507)
chr2 (102-176)||(41499238-41499312)
chr2 (184-244)||(41499308-41499368)
[»] chr7 (34 HSPs)
chr7 (100-244)||(28979167-28979311)
chr7 (100-262)||(46862339-46862501)
chr7 (100-265)||(30360414-30360579)
chr7 (100-244)||(10522986-10523130)
chr7 (100-244)||(48270566-48270710)
chr7 (101-244)||(40588467-40588610)
chr7 (100-244)||(21187444-21187585)
chr7 (100-244)||(26603350-26603494)
chr7 (100-244)||(36393969-36394113)
chr7 (100-244)||(43351244-43351388)
chr7 (100-244)||(48220887-48221031)
chr7 (98-236)||(15338048-15338186)
chr7 (100-244)||(34140783-34140927)
chr7 (120-244)||(42735181-42735305)
chr7 (98-244)||(21650441-21650588)
chr7 (98-244)||(20564677-20564823)
chr7 (100-244)||(41048708-41048845)
chr7 (100-244)||(17183130-17183274)
chr7 (100-240)||(17839245-17839385)
chr7 (100-244)||(20378848-20378992)
chr7 (100-244)||(21614905-21615049)
chr7 (100-244)||(45363388-45363532)
chr7 (116-244)||(48315341-48315469)
chr7 (100-244)||(41217532-41217676)
chr7 (100-244)||(42682874-42683018)
chr7 (98-244)||(28114536-28114682)
chr7 (100-244)||(2356207-2356351)
chr7 (100-244)||(13916752-13916895)
chr7 (100-244)||(18237482-18237626)
chr7 (102-244)||(1642734-1642876)
chr7 (115-237)||(39477400-39477522)
chr7 (119-240)||(8726382-8726503)
chr7 (184-244)||(47268829-47268889)
chr7 (125-244)||(18146877-18146996)
[»] chr3 (63 HSPs)
chr3 (100-244)||(46414479-46414623)
chr3 (102-244)||(43569840-43569982)
chr3 (100-248)||(24702416-24702564)
chr3 (100-244)||(4004232-4004376)
chr3 (100-244)||(14631375-14631519)
chr3 (100-244)||(30192468-30192612)
chr3 (100-244)||(39417093-39417237)
chr3 (100-244)||(48087697-48087841)
chr3 (100-244)||(51013423-51013567)
chr3 (100-244)||(51015207-51015351)
chr3 (100-252)||(51695751-51695903)
chr3 (115-244)||(2428417-2428546)
chr3 (100-244)||(2268639-2268783)
chr3 (100-244)||(13896015-13896159)
chr3 (100-244)||(42382981-42383125)
chr3 (100-244)||(49273329-49273473)
chr3 (100-244)||(53826841-53826985)
chr3 (100-240)||(34472221-34472361)
chr3 (100-244)||(42382201-42382345)
chr3 (100-244)||(42950165-42950309)
chr3 (100-244)||(45100610-45100754)
chr3 (100-244)||(47760036-47760180)
chr3 (100-244)||(49218881-49219025)
chr3 (100-244)||(49610419-49610563)
chr3 (102-244)||(6754134-6754276)
chr3 (98-248)||(8633502-8633652)
chr3 (98-248)||(46402929-46403079)
chr3 (100-241)||(34647412-34647553)
chr3 (100-241)||(41803836-41803976)
chr3 (100-244)||(37281382-37281526)
chr3 (100-244)||(44927393-44927537)
chr3 (100-244)||(47065617-47065761)
chr3 (101-244)||(52569554-52569697)
chr3 (98-244)||(49140197-49140343)
chr3 (98-244)||(54390372-54390518)
chr3 (100-237)||(33449284-33449421)
chr3 (100-244)||(44835632-44835776)
chr3 (98-244)||(6464488-6464634)
chr3 (115-244)||(36134938-36135067)
chr3 (100-244)||(2647021-2647165)
chr3 (100-244)||(25576736-25576880)
chr3 (117-244)||(14265338-14265465)
chr3 (121-244)||(27186878-27187001)
chr3 (98-244)||(34049657-34049803)
chr3 (119-244)||(11378908-11379033)
chr3 (100-228)||(19453374-19453502)
chr3 (100-244)||(3495174-3495318)
chr3 (100-236)||(10053416-10053552)
chr3 (100-244)||(34693435-34693578)
chr3 (100-264)||(36721534-36721694)
chr3 (102-244)||(7246024-7246166)
chr3 (115-244)||(7954133-7954262)
chr3 (127-235)||(42328288-42328396)
chr3 (120-244)||(46346745-46346864)
chr3 (100-244)||(55207029-55207164)
chr3 (98-244)||(774481-774627)
chr3 (98-217)||(15636981-15637100)
chr3 (157-244)||(20378089-20378176)
chr3 (178-232)||(41577870-41577924)
chr3 (100-194)||(43477037-43477131)
chr3 (100-161)||(41577919-41577980)
chr3 (182-244)||(43476974-43477035)
chr3 (138-198)||(4095773-4095833)
[»] chr1 (56 HSPs)
chr1 (100-244)||(38046580-38046724)
chr1 (98-244)||(5765122-5765268)
chr1 (115-244)||(17372643-17372772)
chr1 (100-244)||(23342557-23342701)
chr1 (100-244)||(35184886-35185030)
chr1 (100-248)||(35526323-35526471)
chr1 (100-244)||(35587075-35587219)
chr1 (100-244)||(49396620-49396764)
chr1 (100-243)||(24270509-24270652)
chr1 (100-244)||(6435688-6435832)
chr1 (100-244)||(36909477-36909621)
chr1 (102-244)||(18842355-18842497)
chr1 (100-241)||(29435892-29436033)
chr1 (100-244)||(13635443-13635587)
chr1 (100-244)||(27035464-27035608)
chr1 (100-244)||(29762367-29762511)
chr1 (116-244)||(41780609-41780737)
chr1 (100-244)||(41875030-41875174)
chr1 (100-244)||(47488183-47488327)
chr1 (102-244)||(13283622-13283763)
chr1 (98-244)||(51269718-51269864)
chr1 (100-244)||(12791419-12791564)
chr1 (100-241)||(30309972-30310113)
chr1 (100-241)||(44597620-44597761)
chr1 (100-241)||(48215117-48215258)
chr1 (100-244)||(14173904-14174048)
chr1 (100-244)||(42571922-42572066)
chr1 (100-244)||(44337465-44337609)
chr1 (100-244)||(48568550-48568694)
chr1 (100-244)||(18169941-18170085)
chr1 (100-244)||(19160233-19160377)
chr1 (100-244)||(50068405-50068549)
chr1 (102-241)||(16532238-16532377)
chr1 (115-244)||(27486851-27486980)
chr1 (100-241)||(49427307-49427447)
chr1 (100-244)||(13972841-13972984)
chr1 (98-214)||(21484787-21484903)
chr1 (155-240)||(4209171-4209256)
chr1 (100-237)||(39224343-39224480)
chr1 (100-244)||(17696962-17697106)
chr1 (133-244)||(46181731-46181842)
chr1 (103-233)||(39857055-39857185)
chr1 (100-241)||(45689040-45689179)
chr1 (156-244)||(13148207-13148295)
chr1 (100-214)||(49599020-49599134)
chr1 (100-244)||(17686507-17686637)
chr1 (180-243)||(24364001-24364064)
chr1 (98-220)||(16098076-16098198)
chr1 (155-244)||(37778008-37778097)
chr1 (100-145)||(3658488-3658533)
chr1 (100-194)||(35576305-35576399)
chr1 (115-223)||(15471455-15471563)
chr1 (184-244)||(49926597-49926657)
chr1 (100-145)||(49263134-49263179)
chr1 (100-145)||(49926526-49926571)
chr1 (185-225)||(49263207-49263247)
[»] chr5 (32 HSPs)
chr5 (100-252)||(6793534-6793686)
chr5 (100-244)||(35565187-35565331)
chr5 (100-244)||(541783-541927)
chr5 (100-244)||(1400450-1400594)
chr5 (100-244)||(8537869-8538013)
chr5 (100-244)||(11346624-11346768)
chr5 (100-244)||(18308175-18308319)
chr5 (100-244)||(40009443-40009587)
chr5 (100-244)||(11027692-11027836)
chr5 (100-244)||(38854073-38854217)
chr5 (100-244)||(7377-7521)
chr5 (100-244)||(3458751-3458895)
chr5 (100-244)||(3601256-3601400)
chr5 (100-244)||(8576289-8576433)
chr5 (100-244)||(19400278-19400422)
chr5 (100-244)||(30709513-30709657)
chr5 (102-244)||(17366886-17367027)
chr5 (98-244)||(28880906-28881052)
chr5 (100-244)||(1971280-1971424)
chr5 (100-244)||(36350453-36350597)
chr5 (102-240)||(35927587-35927725)
chr5 (100-244)||(4724222-4724366)
chr5 (98-248)||(2599130-2599280)
chr5 (98-244)||(19036820-19036966)
chr5 (102-244)||(27661527-27661669)
chr5 (102-241)||(33370572-33370711)
chr5 (119-241)||(7082210-7082332)
chr5 (98-244)||(12742630-12742776)
chr5 (98-244)||(12805448-12805594)
chr5 (155-244)||(1691160-1691249)
chr5 (100-194)||(3169569-3169662)
chr5 (178-244)||(25498309-25498375)
[»] chr4 (56 HSPs)
chr4 (100-244)||(49423905-49424049)
chr4 (98-244)||(32938047-32938193)
chr4 (100-244)||(242563-242707)
chr4 (100-248)||(957602-957750)
chr4 (100-244)||(21169367-21169511)
chr4 (100-244)||(22436827-22436971)
chr4 (100-248)||(43889646-43889794)
chr4 (100-244)||(49792083-49792227)
chr4 (100-244)||(21017324-21017468)
chr4 (100-240)||(26591832-26591972)
chr4 (100-244)||(36776666-36776810)
chr4 (100-244)||(37866322-37866466)
chr4 (100-244)||(44560327-44560471)
chr4 (100-244)||(51428339-51428483)
chr4 (117-244)||(10312188-10312315)
chr4 (100-244)||(34153433-34153579)
chr4 (102-244)||(11288211-11288353)
chr4 (100-244)||(28082154-28082298)
chr4 (115-244)||(42886179-42886308)
chr4 (100-244)||(2772925-2773069)
chr4 (100-232)||(17211194-17211326)
chr4 (100-244)||(40353920-40354064)
chr4 (100-244)||(51027914-51028058)
chr4 (98-244)||(6177460-6177606)
chr4 (98-244)||(41794707-41794853)
chr4 (98-244)||(56138826-56138972)
chr4 (120-244)||(3393220-3393344)
chr4 (100-244)||(20779016-20779160)
chr4 (100-244)||(31824776-31824920)
chr4 (100-244)||(34529943-34530087)
chr4 (116-244)||(45939441-45939569)
chr4 (98-233)||(18412522-18412657)
chr4 (100-231)||(47657502-47657633)
chr4 (100-242)||(14330841-14330983)
chr4 (100-244)||(4785569-4785713)
chr4 (116-244)||(20901831-20901959)
chr4 (100-244)||(39588845-39588989)
chr4 (100-244)||(1226076-1226219)
chr4 (100-244)||(6282470-6282614)
chr4 (100-244)||(25762514-25762658)
chr4 (100-244)||(33163691-33163835)
chr4 (117-244)||(31324090-31324217)
chr4 (115-262)||(49063878-49064024)
chr4 (98-244)||(13866179-13866325)
chr4 (98-244)||(49094661-49094807)
chr4 (155-244)||(1042667-1042756)
chr4 (100-244)||(9489595-9489739)
chr4 (100-244)||(46816670-46816814)
chr4 (98-244)||(13850665-13850811)
chr4 (102-244)||(21412674-21412816)
chr4 (98-244)||(24606668-24606814)
chr4 (158-244)||(55794524-55794610)
chr4 (98-244)||(49817789-49817935)
chr4 (206-244)||(13181549-13181587)
chr4 (187-241)||(21711479-21711533)
chr4 (100-141)||(55796762-55796803)
[»] chr8 (27 HSPs)
chr8 (100-241)||(26484506-26484647)
chr8 (100-244)||(18440439-18440583)
chr8 (100-244)||(33799695-33799839)
chr8 (100-244)||(19242306-19242450)
chr8 (100-244)||(19315490-19315634)
chr8 (100-240)||(34614883-34615023)
chr8 (98-244)||(485400-485546)
chr8 (98-244)||(16575618-16575764)
chr8 (102-244)||(41857120-41857262)
chr8 (100-241)||(38034069-38034210)
chr8 (100-244)||(15032468-15032612)
chr8 (100-248)||(24861265-24861413)
chr8 (100-244)||(28706286-28706430)
chr8 (100-244)||(41363582-41363726)
chr8 (100-244)||(42603380-42603524)
chr8 (100-244)||(26452251-26452395)
chr8 (100-244)||(41275320-41275464)
chr8 (100-244)||(44943225-44943368)
chr8 (115-241)||(43693066-43693192)
chr8 (100-244)||(22548189-22548333)
chr8 (100-244)||(40702286-40702430)
chr8 (100-241)||(40415186-40415327)
chr8 (100-233)||(43638821-43638953)
chr8 (100-244)||(2416841-2416985)
chr8 (98-244)||(31171958-31172104)
chr8 (101-244)||(42169105-42169248)
chr8 (100-241)||(40414540-40414680)
[»] scaffold0589 (1 HSPs)
scaffold0589 (100-244)||(2185-2329)
[»] chr6 (18 HSPs)
chr6 (102-244)||(34803043-34803185)
chr6 (100-244)||(22305716-22305860)
chr6 (98-244)||(27640100-27640246)
chr6 (98-244)||(6205404-6205550)
chr6 (100-244)||(12396696-12396840)
chr6 (100-244)||(13402453-13402597)
chr6 (100-244)||(29108060-29108204)
chr6 (100-244)||(32027773-32027917)
chr6 (100-244)||(32037832-32037976)
chr6 (100-251)||(14114954-14115101)
chr6 (155-244)||(3765921-3766010)
chr6 (100-228)||(29066489-29066617)
chr6 (100-228)||(29075502-29075630)
chr6 (115-244)||(801086-801215)
chr6 (98-244)||(11692371-11692517)
chr6 (100-228)||(29110473-29110602)
chr6 (155-244)||(35060168-35060257)
chr6 (100-150)||(35058880-35058930)
[»] scaffold0176 (1 HSPs)
scaffold0176 (100-244)||(1708-1852)
[»] scaffold0181 (1 HSPs)
scaffold0181 (98-244)||(24823-24969)
[»] scaffold0004 (1 HSPs)
scaffold0004 (98-233)||(63905-64039)
[»] scaffold0192 (1 HSPs)
scaffold0192 (178-244)||(18117-18183)


Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 31770510 - 31770283
Alignment:
Q  17 atgtttcaatgtgataagtgcatcatgcatcttaatgagaataaatggcatagttaaattgaactcttgcaataaatcactactgaatgatactctttcc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||    
T  31770510 atgtttcaatgtgataagtgcatcatgcatcttaatgagaataaatggcatagttaaattgaactcttgcaataaatcactattgaatgatactctcccc 31770411  T
Q  117 tcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctc 216  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31770410 tcgtcgaacgttggacgtttataccgaacatattacatcctccttgtgtctatggggttggctccttggttgaattcattcatttcattcttgagacctc 31770311  T
Q  217 ttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||||||||||||||||||    
T  31770310 ttaacgttacaccaaggcaccgaacctt 31770283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 20148180 - 20148038
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    ||||||| |||  |||||| |||||||||| ||||||||||||||||||||| ||||||| |||||  ||||||| ||||||||||||||||||||||||    
T  20148180 aatgatattctcccctcgttgagcgttggacgtttataccgaacatatttcaccctccttgtgtctccggggttgactccttggttgaattcattcattt 20148081  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||| |||||||||||||||||||| ||||||||||||||||||    
T  20148080 catccttgagacctcttaacgttataccaaggcaccgaacctt 20148038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 35491699 - 35491555
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  35491699 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 35491600  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  35491599 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 35491555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 10364779 - 10364923
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  10364779 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 10364878  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||||||||||||||||    
T  10364879 tttatccttgagacctcttaacgttacaccaaggcaccgaacctt 10364923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 37312635 - 37312781
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||  ||||||||||||||||| ||||||||||||| | || |||||||||| |||||  ||||||| ||||||||||||||||| ||    
T  37312635 actgaatgataatctcccctcgtcgagcgttggacgtttataccgaacgtgttccatcctccttgtgtctcgggggttgactccttggttgaattcagtc 37312734  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||||| |||||||||||||||| ||||||||||||||||||||||    
T  37312735 agttcatccttgagacctcttaacattacaccaaggcaccgaacctt 37312781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 19471776 - 19471920
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||| | |||     
T  19471776 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaatttagtcag 19471875  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||    
T  19471876 ttcatccttgagacctcttaacgttacacaaaggcaccgaacctt 19471920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 22493335 - 22493191
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| |||| || |||||||  |||| |||||||| |||||||||||||||||||||     
T  22493335 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctccttgcgtctctggggttgactccttggttgaattcattcag 22493236  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || ||  ||||||||||||||||||||| ||||||||||||||||    
T  22493235 ttgatctttgagacctcttaacgttacatcaaggcaccgaacctt 22493191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 16581886 - 16581742
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||| ||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  16581886 tgaatgatactctcccctcgtcgagcattggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 16581787  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||    
T  16581786 ttcatccttcagacctcttaatgttacaccaaggcaccgaacctt 16581742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 29906646 - 29906502
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  || |||||||||||||| ||||||||||||| |||| || |||||||   ||| |||||||| |||||||||||||||||||||     
T  29906646 tgaatgatactctccccacgtcgagcgttggacgtttataccgaacgtattccaccctccttgcatctctggggttgactccttggttgaattcattcag 29906547  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| ||||||||||||||||    
T  29906546 ttgatccttgagacctcttaacgttacatcaaggcaccgaacctt 29906502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 12968444 - 12968588
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||| ||||| ||||||||||||| |||| || ||||||| ||||| |||||||| |||||||||||||||||||||     
T  12968444 tgaatgatactctcccctcgtcgagcattggacgtttataccgaacgtattccaccctccttgtgtctctggggttgactccttggttgaattcattcag 12968543  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||| |||||||||||||||||| |||||||  |||||||    
T  12968544 ttgatccttaagacctcttaacgttacatcaaggcattgaacctt 12968588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 39799984 - 39800128
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||| ||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  39799984 tgaatgatactctccccttgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactccttggttgaattcagtcag 39800083  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||||||||||||||||    
T  39800084 tttatccttgagacctcttaacgttacaccaaggcaccgaacctt 39800128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 100 - 251
Target Start/End: Complemental strand, 39393955 - 39393804
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| ||||||||||||  | || || ||||||| ||||| || ||||| ||||||||||||||||| |||     
T  39393955 tgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttacaccctccttgtgtctctgaggttgactccttggttgaattcagtcag 39393856  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaacttc 251  Q
    || || |||||||| |||||||||||||||||||||||||||||| ||||||    
T  39393855 ttgatccttgagacttcttaacgttacaccaaggcaccgaaccttcaacttc 39393804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 244
Target Start/End: Original strand, 40678774 - 40678901
Alignment:
Q  117 tcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctc 216  Q
    |||||||| |||||| |||||||||||||   || || ||||||| ||||| |||||||| ||||||||||||||||| ||| ||||| |||||||||||    
T  40678774 tcgtcgagtgttggacgtttataccgaacgcgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctc 40678873  T
Q  217 ttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||||||||||||||||||    
T  40678874 ttaacgttacaccaaggcaccgaacctt 40678901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 17796244 - 17796390
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||   |||||||||||||||||||||||||  ||| | || || ||||| | |||||  ||||||| |||| | |||||||||||||    
T  17796244 actgaatgatactctccactcgtcgagcgttggatgtttatacttaacgtgttccaccctccctgtgtctccggggttgactccctagttgaattcattc 17796343  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||    
T  17796344 agttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 17796390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 6976888 - 6976767
Alignment:
Q  114 tcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagac 213  Q
    |||||||||||||||||| ||||||||||||||| || || ||||||| ||||| ||| |||| ||||||| ||||||||| ||| ||||| ||||||||    
T  6976888 tcctcgtcgagcgttggacgtttataccgaacatgttccaccctccttgtgtctctggagttgactccttgtttgaattcagtcagttcatccttgagac 6976789  T
Q  214 ctcttaacgttacaccaaggca 235  Q
    ||||||||||||||||||||||    
T  6976788 ctcttaacgttacaccaaggca 6976767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 29067793 - 29067650
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||| ||||||||||||| |||     
T  29067793 tgaatgatattctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactc-ttggttgaattcagtcag 29067695  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  29067694 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 29067650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 42241241 - 42241385
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  ||||||||||||||||| ||||||||||||  | ||||| ||||||| ||||| |||||||| ||||||||||||||||| | |     
T  42241241 tgaatgataccctcccctcgtcgagcgttggacgtttataccgaatgtgtttcaccctccttgtgtctctggggttgactccttggttgaattcagtgag 42241340  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||| ||||||||||||||||||| |||||||||||||||    
T  42241341 tttatcctttagacctcttaacgttacactaaggcaccgaacctt 42241385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 3937204 - 3937350
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| ||    
T  3937204 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtc 3937303  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  3937304 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 3937350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 5420533 - 5420389
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||| ||||| | || || ||||||| |||||  ||||||| ||| ||||||||||||| |||     
T  5420533 tgaatgatactctcccctcgtcgagcgttggacgtttatatcgaacgtgttccaccctccttgtgtctccggggttgactcattggttgaattcagtcag 5420434  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||||| |||||||||||| | ||||||    
T  5420433 ttcatccttgagacctcttaacgatacaccaaggcatcaaacctt 5420389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 10360341 - 10360485
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| |||||||| |||| | || || ||||||| ||| |  ||||||| ||||||||||||||||| |||     
T  10360341 tgaatgatactctcccctcgtcgagcgttggacgtttatacagaacgtgttccaccctccttgtgtttccggggttgactccttggttgaattcagtcag 10360440  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||  ||||||||||||||||||| ||||||||| ||||||||    
T  10360441 ttcatctttgagacctcttaacgttataccaaggcatcgaacctt 10360485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 34521826 - 34521969
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||| ||||||| || ||||||||||||| | ||||| ||||||| ||||| |||| ||| ||||||||||||||||| | |     
T  34521826 tgaatgatactctcccctcgttgagcgtttgacgtttataccgaacgtgtttcaccctccttgtgtctctggg-ttgactccttggttgaattcagttag 34521924  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||    
T  34521925 ttcatccttgagacctcttaatgttacaccaaggcgccgaacctt 34521969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 29111224 - 29111081
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  ||||||||||||||||| |||||||| |||| | || || ||||||| ||||| |||||||| |||| || | || |||||||    
T  29111224 actgaatgatactctcccctcgtcgagcgttggacgtttatactgaacgtgttccaccctccttgtgtctttggggttgactccctgttcgagttcattc 29111125  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    | ||||| ||||||||||||||||||||||||||| ||| ||||    
T  29111124 agttcatccttgagacctcttaacgttacaccaagacactgaac 29111081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 17424855 - 17424709
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| | |||||| ||||||||||||||||| ||    
T  17424855 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctagggttgactccttggttgaattcagtc 17424756  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  17424755 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 17424709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 43982922 - 43982776
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| |||| |||||||||||| ||    
T  43982922 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccatggttgaattcagtc 43982823  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  43982822 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 43982776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 2919507 - 2919649
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||| |||||||||||| |||||||| |||| | || || ||||||| ||||| |||  | | ||||||||||||||||| | |     
T  2919507 tgaatgatactctcccctcatcgagcgttggacgtttatacagaacgtgttccaccctccttgtgtctctgg--tagactccttggttgaattcagttag 2919604  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  2919605 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 2919649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 3941801 - 3941660
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| |||||||| |||  | || || ||||||| ||||| |||||||| || |||||||||||||| |||     
T  3941801 tgaatgaaactctcccctcgtcgagcgttggacgtttatactgaaggtgttccaccctccttgtgtctctggggttgacttcttggttgaattcagtcag 3941702  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    || || |||||||||||||||||||| |||||||||||||||    
T  3941701 ttgatccttgagacctcttaacgttaaaccaaggcaccgaac 3941660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 27130651 - 27130795
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  |||||| |||||||||| ||||||||||||  | || || ||||||| |||||  | ||||| ||||||||||||||||| |||     
T  27130651 tgaatgatattctcccctcgttgagcgttggacgtttataccgaatgtgttccaccctccttgtgtctccgaggttgactccttggttgaattcagtcag 27130750  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||    
T  27130751 ttcatccttgagacctcttaacgttgcaccaaggcatcgaacctt 27130795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 34639029 - 34638886
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  |||||| |||||||||| ||||||||||||  | || || ||||||| ||||| |||||||| ||||||||||||||||| | |     
T  34639029 tgaatgaaactctcccctcgttgagcgttggacgtttataccgaaggtgttcca-cctccttgtgtctctggggttgactccttggttgaattcagtaag 34638931  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||| ||||||||||||    
T  34638930 ttgatccttgagacctcttaacgttacaccaatgcaccgaacctt 34638886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 42120076 - 42119932
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||||||||||  |||||||||||| |||| || |||||||   ||| |||||||| ||||||||||||| |||| ||     
T  42120076 tgaatgatactctcccctcgtcgagcgttggacatttataccgaacgtattccaccctccttgcatctctggggttgactccttggttgaactcatccag 42119977  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| ||||||| | ||||||    
T  42119976 ttgatccttgagacctcttaacgttacatcaaggcaacaaacctt 42119932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 33404081 - 33403938
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||||| || ||||||||||||||||| ||||||||||||| |||| || |||| || |||||  |||||||    ||||| |||||||||||    
T  33404081 actgaatgatactattccctcgtcgagcgttggacgtttataccgaacgtattccaccctctttgtgtcttcggggttg---acttggatgaattcattc 33403985  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |||||  ||||||||||||||||||||   |||||||||||||||    
T  33403984 agttcatctttgagacctcttaacgttactataaggcaccgaacctt 33403938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 227
Target Start/End: Complemental strand, 32734711 - 32734584
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  ||||||||||||||| | ||||||||| ||| |||| || ||||||| ||||| |||||||| ||| |||||||||||||||||     
T  32734711 tgaatgataccctcccctcgtcgagcgttgaacgtttataccaaacgtattccaccctccttgtgtctctggggttgactcattggttgaattcattcag 32734612  T
Q  200 ttcattcttgagacctcttaacgttaca 227  Q
    || ||  |||||||||||||||||||||    
T  32734611 ttgatctttgagacctcttaacgttaca 32734584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 6902032 - 6901886
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||  ||||||||||||||||| |||||| |||||  | ||  | ||||||| |||||  ||||||| || | | |||||||||||||    
T  6902032 actgaatgatattctcccctcgtcgagcgttggacgtttatgccgaatgtgttcaaccctccttgtgtctccggggttgacttcctagttgaattcattc 6901933  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||||| |||||||||||||| |||||||||| |||||||||||||    
T  6901932 agttcatccttgagacctcttagcgttacaccatggcaccgaacctt 6901886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 262
Target Start/End: Complemental strand, 16706959 - 16706869
Alignment:
Q  172 ggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaacttctctgcttctcc 262  Q
    ||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||||||||| ||| |||  ||||||||    
T  16706959 ggttgactccttggttgaattcattaagttcatccttgagacctcttaacgttataccaaggcaccgaaccttcaacctctgagcttctcc 16706869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 31773094 - 31773014
Alignment:
Q  17 atgtttcaatgtgataagtgcatcatgcatcttaatgagaataaatggcatagttaaattgaactcttgcaataaatcact 97  Q
    |||||||| ||||||||||| |||||||||| |||| | |||||||| |||||| ||||||||||||||||||||||||||    
T  31773094 atgtttcagtgtgataagtgtatcatgcatcataataaaaataaatgacatagtcaaattgaactcttgcaataaatcact 31773014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 22001826 - 22001766
Alignment:
Q  184 ggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||| ||| || || |||||||||||||||||||||||||||||||||||||||    
T  22001826 ggttgaattcaatcagtttatccttgagacctcttaacgttacaccaaggcaccgaacctt 22001766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 16253507 - 16253396
Alignment:
Q  133 gtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaag 232  Q
    ||||||||||||| |||| || ||||||| ||||   ||||||| |||||||||| |||||| ||| || || ||||| |||||||||||| |||||||     
T  16253507 gtttataccgaacgtattccaccctccttgtgtcccgggggttgactccttggttaaattcactcagttgatccttgatacctcttaacgtgacaccaac 16253408  T
Q  233 gcaccgaacctt 244  Q
    |  |||||||||    
T  16253407 gtgccgaacctt 16253396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 41499238 - 41499312
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttg 176  Q
    |||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| ||||||||    
T  41499238 aatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttctgtctctggggttg 41499312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 41499308 - 41499368
Alignment:
Q  184 ggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||| ||| ||||| |||||||||| ||||||| |||||| | |||||||||||    
T  41499308 ggttgaattcagtcagttcatccttgagaccttttaacgtcacaccatgacaccgaacctt 41499368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 28979167 - 28979311
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||   |||||||||||||||| ||||||||||||| | || || ||||||| |||||||||||||| ||||||||||||||||| |||     
T  28979167 tgaatgatactctcctctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctatggggttgactccttggttgaattcagtcag 28979266  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  28979267 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 28979311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 46862339 - 46862501
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  46862339 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttctgtctctggggttgactccttggttgaattcaatcag 46862438  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaacttctctgcttctcc 262  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||    
T  46862439 ttcatccttgagacctcttaacattacaccaaggcaccgaaccttcaacctctgagcttctcc 46862501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 100 - 265
Target Start/End: Complemental strand, 30360579 - 30360414
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||| |  |||||||||||| |||| || ||||||| |||||||||||||| |||||||||||||||||||||     
T  30360579 tgaatgatactctcccctcgtcgagcgttgtacatttataccgaacgtattccaccctccttgtgtctatggggttgactccttggttgaattcattcag 30360480  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaacttctctgcttctccact 265  Q
    || || |||||||||||||||||||||| ||||||| |||||||| ||| |||  | |||||||||    
T  30360479 ttgatccttgagacctcttaacgttacatcaaggcatcgaaccttcaacctctgaggttctccact 30360414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 10523130 - 10522986
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| | |||||| ||||||||||||||||| |||     
T  10523130 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctagggttgactccttggttgaattcagtcag 10523031  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  10523030 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 10522986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 48270710 - 48270566
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| || |||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  48270710 tgaatgatactctcccctcgtcgagcgttggacgtctataccgaacgtgttccaccctccttttgtctctggggttgactccttggttgaattcagtcag 48270611  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||    
T  48270610 ttcatccttgagactttttaacgttacaccaaggcaccgaacctt 48270566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 244
Target Start/End: Complemental strand, 40588610 - 40588467
Alignment:
Q  101 gaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatt 200  Q
    |||||| |||||  ||||||||||||||||| ||||||||||||  | || || ||||||| ||||| | |||||| ||||||||||||||||| ||| |    
T  40588610 gaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctagggttgactccttggttgaattcaatcagt 40588511  T
Q  201 tcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  40588510 tcatccttgagacctcttaacgttacaccaaggcaccgaacctt 40588467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 21187444 - 21187585
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | ||||| ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  21187444 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgtttcaccctccttgtgtctctggggttgactccttggttgaattcagtcag 21187543  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||   ||||||||||||||||||| |||||||    
T  21187544 ttcatccttgagacc---taacgttacaccaaggcactgaacctt 21187585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 26603350 - 26603494
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  | ||||||||||||||| ||||||||||||| |||| || ||||||| ||||| || ||||  |||||||||||||||||||||     
T  26603350 tgaatgataccctcccttcgtcgagcgttggacgtttataccgaacgtattccaccctccttgtgtctctgaggttaactccttggttgaattcattcag 26603449  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| ||||||||||||||||    
T  26603450 ttgatccttgagacctcttaacgttacatcaaggcaccgaacctt 26603494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 36393969 - 36394113
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  |||||||||| |||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  36393969 tgaatgatattctcccctcgtcgagtgttggacgtttataccgaacgtgttccaccctccttgtgtctttggggttgactccttggttgaattcagtcag 36394068  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||| |||||||||| |||||||||||    
T  36394069 ttcatccttgagacctcttaacattacaccaagacaccgaacctt 36394113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 43351244 - 43351388
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||| |||||||||||| |||||||| |||| | || || ||||||| ||||| |||||| | ||||||||||||||||| | |     
T  43351244 tgaatgatactctcccctcatcgagcgttggacgtttatactgaacgtgttccaccctccttgtgtctctggggtagactccttggttgaattcagttag 43351343  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  43351344 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 43351388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 48220887 - 48221031
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| |||| || |||||||   ||| |||||||| ||||||||||||||||| |||     
T  48220887 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctccttgcatctctggggttgactccttggttgaattcagtcag 48220986  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||  ||||||||||||||||||||| ||||| ||||||||||    
T  48220987 ttcatcattgagacctcttaacgttacatcaaggtaccgaacctt 48221031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 236
Target Start/End: Original strand, 15338048 - 15338186
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||| |||||||| |  |||||||||||| | || || ||||||| ||||| ||||||||  |||||||||||||||||||    
T  15338048 actgaatgatactctcccctcgttgagcgttgaacatttataccgaacgtgttccaccctccttgtgtctctggggttgaatccttggttgaattcattc 15338147  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcac 236  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  15338148 atttcatccttgagacctcttaacgtcacaccaaggcac 15338186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 34140927 - 34140783
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||||||||||||||||  | || || ||||||| ||||| | |||||| || ||||| |||||||| |||     
T  34140927 tgaatgatactctcccctcgtcgagcgttggatgtttataccgaaattgttccaccctccttgtgtctctagggttgacttcttggctgaattcagtcag 34140828  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||    
T  34140827 ttcatccttgagacctcttaatgttacaccaaggcatcgaacctt 34140783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 244
Target Start/End: Complemental strand, 42735305 - 42735181
Alignment:
Q  120 tcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctctta 219  Q
    |||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| ||| ||||| ||||||||||||||    
T  42735305 tcgagcgttggacgtttataccgaacgtgttccaccctccttctgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctctta 42735206  T
Q  220 acgttacaccaaggcaccgaacctt 244  Q
    |||||||||| ||||||| ||||||    
T  42735205 acgttacaccgaggcaccaaacctt 42735181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 21650588 - 21650441
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatgg-ggttggctccttggttgaattcatt 196  Q
    |||||||||||||||  ||||||||||||||||| |||||||  |||| | || || ||||||| |||||  || ||||| ||||||||||||||||| |    
T  21650588 actgaatgatactctcccctcgtcgagcgttggacgtttataatgaacgtgttccaccctccttgtgtctcaggtggttgactccttggttgaattcagt 21650489  T
Q  197 catttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || ||||| |||||||||||||||||||| ||||||||||||||||||    
T  21650488 cagttcatccttgagacctcttaacgttataccaaggcaccgaacctt 21650441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 20564823 - 20564677
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| ||    
T  20564823 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtc 20564724  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  20564723 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 20564677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 41048845 - 41048708
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || |||||||||| ||||| | |||||| ||||||||||||||||| |||     
T  41048845 tgaatgatactctcacctcgtcgagcgttggacgtttataccgaacgtgttccatcctccttctgtctctagggttgactccttggttgaattcagtca- 41048747  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
          ||||||||||||||| |||||||||||||||||||||||    
T  41048746 ------cttgagacctcttaatgttacaccaaggcaccgaacctt 41048708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 17183274 - 17183130
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||| |||||||||| |||||| ||||||||| ||| | || || ||||||| ||||| |  ||||| ||||||||||||||||| |||     
T  17183274 tgaatgatattcttccctcgtcgagtgttggacgtttataccaaacgtgttacaccctccttgtgtctctaaggttgactccttggttgaattcagtcag 17183175  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||    
T  17183174 ttcatccttgagacctcttaacgttacaccaaggcaacaaacctt 17183130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 17839385 - 17839245
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||| |||||||||||| |||||| || ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  17839385 tgaatgatactctcccctcatcgagcgttggacgtttattccaaacgtcttccaccatccttgtgtctctggggttgactccttggttgaattcagtcag 17839286  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaa 240  Q
    ||||| |||||||||||||||||||||||||||| ||||||    
T  17839285 ttcatccttgagacctcttaacgttacaccaaggtaccgaa 17839245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 20378848 - 20378992
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  |||||| | || ||||| ||||||||||||| |||| || ||||||| ||||| |||||||| ||||||||||||||| |||||     
T  20378848 tgaatgataccctcccctcgttgtgcattggacgtttataccgaacgtattccaccctccttgtgtctctggggttgactccttggttgaatttattcaa 20378947  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| ||||||| ||||||||    
T  20378948 ttgatccttgagacctcttaacgttacatcaaggcatcgaacctt 20378992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 21614905 - 21615049
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||| ||||||||||||||| | ||||||| ||||| | || || ||||||| |||||  | ||||| |||| | ||||||||||||||     
T  21614905 tgaatgatactcttccctcgtcgagcgttgaacgtttatatcgaacgtgttccaccctccttgtgtctccgaggttgactccctagttgaattcattcag 21615004  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||  |||||||||||||||| |||||||||||||||||||||    
T  21615005 ttcatcattgagacctcttaacgatacaccaaggcaccgaacctt 21615049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 45363388 - 45363532
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| ||||| | |||||||||||||||| |||||||| |||  | || || ||||||| ||||| |||||||| || |||||||||||||| |||     
T  45363388 tgaatgaaactctctgctcgtcgagcgttggacgtttatactgaaggtgttccaccctccttgtgtctctggggttgacttcttggttgaattcagtcag 45363487  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||||||||||||||||||||||||||| |||||||||||    
T  45363488 ttgatccttgagacctcttaacgttacaccaagacaccgaacctt 45363532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 244
Target Start/End: Original strand, 48315341 - 48315469
Alignment:
Q  116 ctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacct 215  Q
    ||||| |||||||||| ||||||||| ||| | || || ||||||| | ||| |||||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  48315341 ctcgttgagcgttggacgtttataccaaacgtgttccaccctccttctatctctggggttgactccttggttgaattcagtcagttcatccttgagacct 48315440  T
Q  216 cttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||||||| |||||||||||    
T  48315441 cttaacgttacaccaagacaccgaacctt 48315469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 41217676 - 41217532
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||| || ||||||||||||  ||| || ||||||| ||||| || ||||| |||||||||| |  |||||||     
T  41217676 tgaatgatactctcccctcgtcgagcgttgaatttttataccgaactaattccaccctccttgtgtctttgaggttgactccttggttaacctcattcag 41217577  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||| | ||||||||||||||||    
T  41217576 ttgatccttgagacctcttaacgttaaatcaaggcaccgaacctt 41217532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 42683018 - 42682874
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  ||||||||  ||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  42683018 tgaatgatattctcccctcgtcgttcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 42682919  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||  |||||| ||| |||||||||||    
T  42682918 ttcatccttgagacctcttaattttacactaagtcaccgaacctt 42682874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 28114536 - 28114682
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||| |||||||| ||||||||||||| | || || ||||||| | ||| |||||||| ||||||||||||||||| ||    
T  28114536 actgaatgatactctcccctcgtcgggcgttggacgtttataccgaacgtgttccaccctccttgtttctctggggttgactccttggttgaattcagtc 28114635  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||||  |||  ||||||||||||||||||||| | || |||||||    
T  28114636 agttcaccctttggacctcttaacgttacaccaaaggactgaacctt 28114682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 2356351 - 2356207
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||| |||||||||||||||||||||||||| | || || ||||||| ||||| | |||||| ||||||||||||||||  | |     
T  2356351 tgaatgatactctcccctcttcgagcgttggatgtttataccgaacgtgttccaccctccttgtgtctctagggttgactccttggttgaattcggtgag 2356252  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||| |||||||||| | ||||||||||||| | ||||||    
T  2356251 ttcatcctttagacctcttagcattacaccaaggcatcaaacctt 2356207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 13916895 - 13916752
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||  | || || | ||||| ||||| |||||||| ||| ||||||||||||| |||     
T  13916895 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactc-ttggttgaattcagtcag 13916797  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||| |||||||||| |||| |||||||||||||||||    
T  13916796 ttcatccttgaaacctcttaacattacgccaaggcaccgaacctt 13916752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 18237626 - 18237482
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||| ||||  ||| |||||||||| || ||||||||||||| |||| || | |||||  |||| ||| |||| || ||||||||||||||||||     
T  18237626 tgaatgatcctctccccttgtcgagcgttagacgtttataccgaacgtattccaccatccttgcgtctctggagttgacttcttggttgaattcattcag 18237527  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||||||||||| |||||||||| ||||||||||||||||    
T  18237526 ttgatccttgagacctcgtaacgttacatcaaggcaccgaacctt 18237482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 1642734 - 1642876
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    ||||||| |||  |||||||||| |||| | ||||||| | ||| |||| || ||||||| |||||  ||| ||| ||||||||||||||||||||| ||    
T  1642734 aatgatattctcccctcgtcgagtgttgaacgtttatatcaaacgtattccaccctccttgtgtctccgggattgactccttggttgaattcattcaatt 1642833  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
     || |||||||||||||||| |||| |||||||| ||||||||    
T  1642834 gatccttgagacctcttaacattactccaaggcatcgaacctt 1642876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 39477400 - 39477522
Alignment:
Q  115 cctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacc 214  Q
    ||||||||||||||||| |||||||| |||| | || || ||||||| ||| | |||||||| ||||||||||||||||| | | ||||| ||| |||||    
T  39477400 cctcgtcgagcgttggacgtttatactgaacgtgttccaccctccttgtgtatctggggttgactccttggttgaattcagtgagttcatcctttagacc 39477499  T
Q  215 tcttaacgttacaccaaggcacc 237  Q
    |||||||||||||| ||| ||||    
T  39477500 tcttaacgttacactaagccacc 39477522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 240
Target Start/End: Original strand, 8726382 - 8726503
Alignment:
Q  119 gtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctctt 218  Q
    ||||| || |||| ||||||||||||| |||| || ||||||| ||||||  |||||| ||||||||||||||||||  | || || ||||||||||| |    
T  8726382 gtcgaacgatggacgtttataccgaacttattccaccctccttgtgtctacagggttgactccttggttgaattcatcaagttgatccttgagacctcgt 8726481  T
Q  219 aacgttacaccaaggcaccgaa 240  Q
    ||||| ||||||||| ||||||    
T  8726482 aacgtgacaccaaggtaccgaa 8726503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 47268889 - 47268829
Alignment:
Q  184 ggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||||| || || |||||||||||||||||||||| ||||||||||||||||    
T  47268889 ggttgaattcattcagttgatccttgagacctcttaacgttacatcaaggcaccgaacctt 47268829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 244
Target Start/End: Complemental strand, 18146996 - 18146877
Alignment:
Q  125 cgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgtt 224  Q
    ||||||| ||| ||||| ||  |||| || ||||||| |||||  |||||||  ||||||||||| |||||||| || || |||||||||| |||||||     
T  18146996 cgttggacgttcataccaaaagtattccaccctccttgtgtctccggggttgagtccttggttgatttcattcagttgatccttgagaccttttaacgtg 18146897  T
Q  225 acaccaaggcaccgaacctt 244  Q
    |||  || | ||||||||||    
T  18146896 acattaatgtaccgaacctt 18146877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 46414479 - 46414623
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||   |||||||||||||||||||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  46414479 tgaatgatactctccactcgtcgagcgttggatgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 46414578  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  46414579 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 46414623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 43569982 - 43569840
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    |||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| ||| ||    
T  43569982 aatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttctgtctctggggttgactccttggttgaattcagtcagtt 43569883  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  43569882 catccttgagacctcttaacgttacaccaaggcaccgaacctt 43569840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 100 - 248
Target Start/End: Original strand, 24702416 - 24702564
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  ||||||||||||||||| ||||||||||||| | || || ||||||| |||||||||||||| |||||||||| |||||| |||     
T  24702416 tgaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctatggggttgactccttggttcaattcagtcag 24702515  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaac 248  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  24702516 ttcatctttgagacctcttaacgttacaccaaggcaccgaacctttaac 24702564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 4004232 - 4004376
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||| ||||||||||| ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  4004232 tgaatgatactctcccctcgtcgagcgttgaatgtttataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcag 4004331  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  4004332 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 4004376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 14631519 - 14631375
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||| | || || ||||||| ||||| || ||||| ||||||||||||||||| |||     
T  14631519 tgaatgatactctttactcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctgaggttgactccttggttgaattcagtcag 14631420  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||    
T  14631419 ttcatccttgagacctcttaacgttacaacaaggcactgaacctt 14631375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 30192612 - 30192468
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  30192612 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 30192513  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||  ||||||||||||||||||||||    
T  30192512 ttcatacttgagacctcttaaaattacaccaaggcaccgaacctt 30192468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 39417093 - 39417237
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||  ||| || ||||||| ||||| || ||||| |||||||||||||||||||||     
T  39417093 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaactaattccaccctccttgtgtctttgaggttgactccttggttgaattcattcag 39417192  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| ||||||||||||||||    
T  39417193 ttgatccttgagacctcttaacgttacatcaaggcaccgaacctt 39417237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 48087697 - 48087841
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||  ||| || | ||||| ||||| |||||||| |||||||||||||||||||| |    
T  48087697 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaactaattccaccatccttgtgtctttggggttgactccttggttgaattcattcgt 48087796  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| ||||||||||||||||    
T  48087797 ttgatccttgagacctcttaacgttacatcaaggcaccgaacctt 48087841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 51013423 - 51013567
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||| |||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  51013423 tgaatgatactctcccctcgttgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 51013522  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||  ||||||||||||||||||||||||||||||||||||||    
T  51013523 ttcatcattgagacctcttaacgttacaccaaggcaccgaacctt 51013567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 51015351 - 51015207
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||| | ||||||||||||||||| |||     
T  51015351 tgaatgatacactcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctttggggtcgactccttggttgaattcagtcag 51015252  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  51015251 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 51015207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 252
Target Start/End: Original strand, 51695751 - 51695903
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| ||| || ||||||||||||||||| ||||||||||||  | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  51695751 tgaatgaaacttttccctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 51695850  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaacttct 252  Q
    || || ||||||||||||||||||||||||||||||||||||||| |||||||    
T  51695851 ttgatccttgagacctcttaacgttacaccaaggcaccgaaccttcaacttct 51695903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 115 - 244
Target Start/End: Complemental strand, 2428546 - 2428417
Alignment:
Q  115 cctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacc 214  Q
    ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| ||| ||||| |||||||||    
T  2428546 cctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttctgtctctggggttgactccttggttgaattcagtcagttcatccttgagacc 2428447  T
Q  215 tcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||||||||||||||| |||||||||||    
T  2428446 tcttaacgttacaccaagtcaccgaacctt 2428417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 2268639 - 2268783
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  2268639 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacttgttccaccatccttgtgtctttggggttgactccttggttgaattcaatcag 2268738  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||    
T  2268739 ttcatccttaagacctcttaacgttacaccaaggcaccgaacctt 2268783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 13896015 - 13896159
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| | |||||| ||| ||||||||||||| |||     
T  13896015 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctagggttgactcattggttgaattcagtcag 13896114  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  13896115 ttcatccttgagacctcttaatgttacaccaaggcaccgaacctt 13896159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 42383125 - 42382981
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||| |||||| |||||||| |||| || | || |||||||| |||| |||||||| |||||||||||||||||||||     
T  42383125 tgaatgatactctcccctcgtcgagtgttggaagtttatactgaacgtagtccaccctccttacgtctctggggttgactccttggttgaattcattcag 42383026  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| ||||||||||||||||    
T  42383025 ttgatccttgagacctcttaacgttacatcaaggcaccgaacctt 42382981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 49273473 - 49273329
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||  | || || ||||||| ||||| | ||||||  |||||||||||||||| |||     
T  49273473 tgaatgatactctgccctcgtcgagcgttggacgtttataccgaatgtgttccaccctccttgtgtctctagggttgattccttggttgaattcagtcag 49273374  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  49273373 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 49273329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 53826841 - 53826985
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||| ||||| ||||||||||||| |||| || |||||||  |||| |||||||| ||||||||||||||||| |||     
T  53826841 tgaatgatactctcccctcgtcgagcattggacgtttataccgaacgtattccaccctccttgcgtctctggggttgactccttggttgaattcagtcag 53826940  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||    
T  53826941 ttcatccttgagacctcttaacgttaaatcaaggcaccgaacctt 53826985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 240
Target Start/End: Original strand, 34472221 - 34472361
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||| |||||||||| ||||||||||||  | || || ||||||| ||||| || ||||| ||||||||||||||||| |||     
T  34472221 tgaatgatactctcccctcgtagagcgttggacgtttataccgaatgtgttccaccctccttgtgtctttgaggttgactccttggttgaattcagtcag 34472320  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaa 240  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  34472321 ttcatccttgagacctcttaacgttacaccaaggcaccgaa 34472361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 42382345 - 42382201
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||| |||||| |||||||| |||| || | || |||||||| |||| |||||||| |||||||||||||||||||||     
T  42382345 tgaatgatactctcccctcgtcgagtgttggacgtttatactgaacgtagtccaccctccttacgtctctggggttgactccttggttgaattcattcag 42382246  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||||||||| |||||||||||| ||||||||||||||||    
T  42382245 ttgatccttgagaccacttaacgttacatcaaggcaccgaacctt 42382201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 42950165 - 42950309
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||| |||||||||||||||||  |||||||||||| |||| || ||| |||  |||| |||||||| ||| |||||||||||||||||     
T  42950165 tgaatgatactcttccctcgtcgagcgttggacatttataccgaacgtattccacccttcttgcgtctctggggttgactcattggttgaattcattcag 42950264  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || ||  ||||||||||||||||||||| ||||||||||||||||    
T  42950265 ttgatcattgagacctcttaacgttacatcaaggcaccgaacctt 42950309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 45100610 - 45100754
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  | ||||||||||||||| ||||||||||||| | || || ||||||| |||||||||| ||| ||||||||||||| ||| |||     
T  45100610 tgaatgatactctcccttcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctatgggattgactccttggttgaaatcagtcag 45100709  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||    
T  45100710 ttcatccttaagacctcttaacgttacaccaagacaccgaacctt 45100754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 47760036 - 47760180
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| |||||||| |||| | || || ||||||| ||||| |||||||| || |||||||||||| | |||     
T  47760036 tgaatgatactctcccctcgtcgagcgttggacgtttatacggaacgtgttccaccctccttgtgtctctggggttgacttcttggttgaatttaatcag 47760135  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||  ||||||||||||||||||||||||||||||||||||||    
T  47760136 ttcatcattgagacctcttaacgttacaccaaggcaccgaacctt 47760180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 49218881 - 49219025
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  ||||||||||||||||| ||||||||| ||  | || || ||||||| ||||| | |||||| ||||||||||||||||| |||     
T  49218881 tgaatgatattctcccctcgtcgagcgttggacgtttataccaaaggtgttccaccctccttgtgtctctagggttgactccttggttgaattcagtcag 49218980  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  49218981 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 49219025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 49610563 - 49610419
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| ||||||| ||||  | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  49610563 tgaatgaaactctcccctcgtcgagcgttggacgtttatatcgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 49610464  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||||||||||||||||    
T  49610463 ttgatccttgagacctcttaacgttacaccaaggcaccgaacctt 49610419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 6754276 - 6754134
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    ||||||| |||  ||||||||||||||||| ||||||||||||| |||| || |||| || |||||  ||||||| |||||| |||||||||||||| ||    
T  6754276 aatgatattctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctctttgtgtctccggggttgactccttagttgaattcattcagtt 6754177  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||| ||||| ||||||||||||||||||||||||| |||||||    
T  6754176 catccttgatacctcttaacgttacaccaaggcactgaacctt 6754134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 248
Target Start/End: Original strand, 8633502 - 8633652
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  ||||||||||||||||||||||||||| ||| |||| || ||||||| |||||   | |||  ||||||||||||||||||||    
T  8633502 actgaatgatactctcccctcgtcgagcgttggatgtttataccaaacgtattccaccctccttgtgtctcctgtgttaactccttggttgaattcattc 8633601  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaac 248  Q
    | ||||| | ||||||||||||||||||||||||| |||| ||| ||||||    
T  8633602 agttcatccatgagacctcttaacgttacaccaagacaccaaacatttaac 8633652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 46403079 - 46402929
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| ||    
T  46403079 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtc 46402980  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaac 248  Q
    | |  || |||||||||||||||||||||||||||||||||||||||||||    
T  46402979 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctttaac 46402929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 100 - 241
Target Start/End: Original strand, 34647412 - 34647553
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| |||||||| |||| | || || ||||||| |||||  ||||||| ||||||||||||||||| |||     
T  34647412 tgaatgatactctcccctcgtcgagcgttggacgtttatactgaacgtgttccaccctccttgtgtctcgggggttgactccttggttgaattcagtcag 34647511  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||    
T  34647512 ttcatccttgagatctcttaacgttacaccaagacaccgaac 34647553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 41803976 - 41803836
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||| | ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  41803976 tgaatgatactctcccctcgtcgagcgttgaacgtttataccgaacgtgttccaccctccttttgtctctggggttgactccttggttgaattcagtcag 41803877  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    ||||| |||||||||| ||||||| |||||||||||||||||    
T  41803876 ttcatccttgagacct-ttaacgtcacaccaaggcaccgaac 41803836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 37281526 - 37281382
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  |||||||||| |||||| ||||||||||||| | || |||| ||||| |||||||||||||| ||||||||||||||| |   |     
T  37281526 tgaatgataccctaccctcgtcgagtgttggacgtttataccgaacgtgttccatcatccttgtgtctatggggttgactccttggttgaatttagcgag 37281427  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||    
T  37281426 ttcatcctttagacctcttaacgttacaccaaggcaccgaacctt 37281382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 44927537 - 44927393
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  ||||||||||||||||| ||||||||||||| | || || ||||||| |||||  ||||||| ||||||||||||||||| |||     
T  44927537 tgaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagtcag 44927438  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||| |||||| || ||||||||    
T  44927437 ttcatccttgagacctcttaacgttaaaccaagacatcgaacctt 44927393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 47065761 - 47065617
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||| ||||||||| |||||||| |||| |||| || ||||||| ||||| ||| |||| |||||||||||||||||||||     
T  47065761 tgaatgatactctcccctcgtcaagcgttggacgtttatactgaacgtattccaccctccttgtgtctctggagttgactccttggttgaattcattcag 47065662  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||||||||||||||| |||||| ||||||||| ||||||    
T  47065661 ttgatccttgagacctcttaatgttacatcaaggcaccaaacctt 47065617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 101 - 244
Target Start/End: Original strand, 52569554 - 52569697
Alignment:
Q  101 gaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatt 200  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||  | || || | ||||| ||||| ||||| || ||||||||||||||||| | | |    
T  52569554 gaatgatactctcccctcgtcgagcgttggacgtttataccgaatgtgttccaccatccttttgtctctggggctgactccttggttgaattcagttagt 52569653  T
Q  201 tcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||| ||||||||||||||||||||||||||| |||||||||||    
T  52569654 tcatccttgagacctcttaacgttacaccaagacaccgaacctt 52569697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 49140197 - 49140343
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| ||    
T  49140197 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtc 49140296  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  49140297 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 49140343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 54390518 - 54390372
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| ||    
T  54390518 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtc 54390419  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  54390418 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 54390372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 33449284 - 33449421
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||||||| || ||||||| ||||| ||||||| ||||||| ||||| |||||||| ||||||| ||| |||||||||     
T  33449284 tgaatgatactctcccctcgtcgagcgtttgacgtttatatcgaacgtatttcaccctccttgtgtctttggggttgactccttgattggattcattcag 33449383  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcacc 237  Q
    || ||  ||||||||| |||||||||||||||||||||    
T  33449384 ttgatctttgagaccttttaacgttacaccaaggcacc 33449421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 44835632 - 44835776
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||| ||||| ||||||||| ||||| |||| || |||||||  |||| | |||||| ||||||||||||||||||| |     
T  44835632 tgaatgatactctcccctcgtcgaacgttgaatgtttatatcgaacgtattccaccctccttgcgtctctagggttgactccttggttgaattcatttag 44835731  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||| |||||||||||||||||| ||||||||||||||||    
T  44835732 ttgatccttaagacctcttaacgttacatcaaggcaccgaacctt 44835776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 6464488 - 6464634
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||  ||||||||||||||||| ||||||||| ||| |||| || |||| || ||||   ||||||| |||||| |||||||||||||    
T  6464488 actgaatgatattctcccctcgtcgagcgttggacgtttataccaaacgtattccaccctctttgtgtcaccggggttgactccttagttgaattcattc 6464587  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |||||  |||| ||||||||||||||||||||||||| |||||||    
T  6464588 agttcatctttgatacctcttaacgttacaccaaggcactgaacctt 6464634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 244
Target Start/End: Complemental strand, 36135067 - 36134938
Alignment:
Q  115 cctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacc 214  Q
    ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| | |||||| ||| |||||||||| || ||| ||||| |||||||||    
T  36135067 cctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctagggttgactcattggttgaatccagtcagttcatccttgagacc 36134968  T
Q  215 tcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||||||||||||||||||||    
T  36134967 tcttaacgttacaccaaggcaccgaacctt 36134938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 2647021 - 2647165
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  | ||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||| || |||||||||| |||     
T  2647021 tgaatgatactctcccatcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactctttcgttgaattcagtcag 2647120  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||| ||||||||||||||||||||||||||||||    
T  2647121 tttatccttgagacatcttaacgttacaccaaggcaccgaacctt 2647165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 25576736 - 25576880
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||| |||| || |||||||  |||| ||||||||  ||||| ||||||||||||||     
T  25576736 tgaatgataatctcccctcgtcgagcgttggatgtttataccgaacgtattccaccctccttgcgtctctggggttgaatccttagttgaattcattcag 25576835  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||| |||||| |||||| |||| |||| ||||||    
T  25576836 ttgatccttgagacttcttaatgttacatcaagacaccaaacctt 25576880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 117 - 244
Target Start/End: Complemental strand, 14265465 - 14265338
Alignment:
Q  117 tcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctc 216  Q
    ||||||| ||||||||||||||||||||| |||| || | ||||| ||||| |||||||| ||||||||||||||||||||| || || ||| ||||| |    
T  14265465 tcgtcgaacgttggatgtttataccgaacgtattccaccttccttgtgtctctggggttgactccttggttgaattcattcagttgatccttaagaccac 14265366  T
Q  217 ttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| | ||||||||| ||||||||||    
T  14265365 ttaacatgacaccaaggtaccgaacctt 14265338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 27187001 - 27186878
Alignment:
Q  121 cgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaa 220  Q
    ||||| |||||  |||||||  ||| |||| || ||||||| ||||| |||||||| ||||||||||||||||||||| ||||| |||||||||||||||    
T  27187001 cgagcattggacatttatactaaacgtattccaccctccttgtgtctctggggttgactccttggttgaattcattcagttcatccttgagacctcttaa 27186902  T
Q  221 cgttacaccaaggcaccgaacctt 244  Q
    |||||||||||| ||| |||||||    
T  27186901 cgttacaccaagacactgaacctt 27186878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 34049803 - 34049657
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||| | ||||||||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| ||    
T  34049803 actgaatgatactctcccctcgtcgagtgttgaacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtc 34049704  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || ||||||||||||||| |||||||||||||||||||||||    
T  34049703 agtgtatccttgagacctcttaatgttacaccaaggcaccgaacctt 34049657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 11378908 - 11379033
Alignment:
Q  119 gtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctctt 218  Q
    ||||||||||||| ||||||||||||| | || || ||||||| |||||  || |||| ||||||||| ||||||| ||| ||||| |||||||||||||    
T  11378908 gtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctccggtgttgactccttggtagaattcagtcagttcatccttgagacctctt 11379007  T
Q  219 aacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||||||| | ||||||    
T  11379008 aacgttacaccaaggcatcaaacctt 11379033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 228
Target Start/End: Original strand, 19453374 - 19453502
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||| ||||||| ||||| ||||||| ||||| | || || ||||||| | ||| |||||||| ||||||||||||||||| |||     
T  19453374 tgaatgatactctccccttgtcgagcattggacgtttatatcgaacgtgttccaccctccttctatctctggggttgactccttggttgaattcagtcag 19453473  T
Q  200 ttcattcttgagacctcttaacgttacac 228  Q
    ||||| |||||||||||||||||||||||    
T  19453474 ttcatccttgagacctcttaacgttacac 19453502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 3495174 - 3495318
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||| | ||| | || || | ||||| ||||| |||||||| ||| ||||||||||| | | |     
T  3495174 tgaatgatactctcccctcgtcgagcgttggacgtttatatcaaacgtgttccaccatccttgtgtctctggggttgactcattggttgaatttagttag 3495273  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||| ||||||||||||||||| ||||||||||    
T  3495274 tttatccttgagaccttttaacgttacaccaaggtaccgaacctt 3495318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 236
Target Start/End: Original strand, 10053416 - 10053552
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||||||||||  |||||||||||  |||| || ||||||| ||||| |   |||  |||||||||||||||||  ||     
T  10053416 tgaatgatactctcccctcgtcgagcgttggacatttataccgaatgtattccaccctccttgtgtctctcaagtttactccttggttgaattcagccag 10053515  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcac 236  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  10053516 ttcatccttgagacctcttaacgttacaccaatgcac 10053552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 34693435 - 34693578
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||||||   ||||||||||||||||| |||||||| |||  | || || ||||||| |||||   || ||  |||||||||| |||||| |||     
T  34693435 tgaatgatactcaaccctcgtcgagcgttggacgtttatactgaaggtgttccaccctccttgtgtctcaagg-ttaactccttggttaaattcagtcag 34693533  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  34693534 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 34693578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 264
Target Start/End: Original strand, 36721534 - 36721694
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||   ||||||||||||||||  |||||||||||| | || || ||||||| ||||| |||||||| |||| || ||||||| | | |     
T  36721534 tgaatgatactctcctctcgtcgagcgttggacatttataccgaacgtgttccaccctccttgtgtctttggggttgactccatgattgaatttagtgag 36721633  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaacttctctgcttctccac 264  Q
    ||||| |    |||||||||||||||||||||||||||||||||| ||| ||| || ||||||||    
T  36721634 ttcatcc----gacctcttaacgttacaccaaggcaccgaaccttcaacctctgtggttctccac 36721694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 7246166 - 7246024
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    ||||||| |||  ||||||||||||||||| ||||||||||||  | || ||  || ||| |||||||| |||||  |||||||||||||||| | | ||    
T  7246166 aatgatattctcccctcgtcgagcgttggacgtttataccgaatgtgttccactcttcttgtgtctatgaggttgaatccttggttgaattcagttagtt 7246067  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||| ||| | ||||||||||||||||||||||||| |||||||    
T  7246066 catccttcaaacctcttaacgttacaccaaggcactgaacctt 7246024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 244
Target Start/End: Complemental strand, 7954262 - 7954133
Alignment:
Q  115 cctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacc 214  Q
    |||| ||||| |||||| |||||| |||||| |||| || ||||||| |||||  ||||||| || | | |||||||||||||| ||| | |||||||||    
T  7954262 cctcatcgagtgttggacgtttatgccgaacgtattccaccctccttgtgtctccggggttgactacctagttgaattcattcagttcttccttgagacc 7954163  T
Q  215 tcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||||||||||| || |||||    
T  7954162 tcttaacgttacaccaaggcaacggacctt 7954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 42328288 - 42328396
Alignment:
Q  127 ttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttac 226  Q
    ||||| ||||||||||||| | || || ||||||| ||||| ||||||||  ||||||| |||||||| ||| ||||| ||| |||||||||||||||||    
T  42328288 ttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgattccttggctgaattcagtcagttcatcctttagacctcttaacgttac 42328387  T
Q  227 accaaggca 235  Q
    |||||||||    
T  42328388 accaaggca 42328396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 46346745 - 46346864
Alignment:
Q  120 tcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctctta 219  Q
    |||||||||||| |||||||| |||| | || || ||||||| ||||| |     || |||||||||||||||||  || ||||| ||||||||||||||    
T  46346745 tcgagcgttggacgtttatacggaacgtgttccaccctccttgtgtctct-----tgactccttggttgaattcagccagttcatccttgagacctctta 46346839  T
Q  220 acgttacaccaaggcaccgaacctt 244  Q
    |||||||||||||||||||||||||    
T  46346840 acgttacaccaaggcaccgaacctt 46346864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 55207029 - 55207164
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||| ||||| ||||||||||||| | ||||| ||||||| ||||| ||||         ||||||||||||| |||     
T  55207029 tgaatgatactctcacctcgtcgagcattggacgtttataccgaacgtgtttcaccctccttctgtctctggg---------ttggttgaattcagtcag 55207119  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||| ||||||| |||| |||||||||||||||    
T  55207120 ttcatccttgagaccttttaacgtcacactaaggcaccgaacctt 55207164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 774481 - 774627
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||  | ||||||||||||||| ||||||| | |||| ||| ||  |||||  |||||  ||||||| || |||||||||||||||      
T  774481 actgaatgatattctcccgtcgtcgagcgttggacgtttatagcaaacacattccactctcctcgtgtctccggggttgactacttggttgaattcatca 774580  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | || ||  ||||||||||||| |||||||||||||||| |||||||    
T  774581 agttgatcattgagacctcttagcgttacaccaaggcactgaacctt 774627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 15637100 - 15636981
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||  | |||||||| |||||| ||||||||||||| |||| || ||||||| |||||||||||||| || |||  |||||| |||||    
T  15637100 actgaatgatattctcccatcgtcgagtgttggacgtttataccgaacgtattccaccctccttgtgtctatggggttgactactttcttgaatccattc 15637001  T
Q  198 atttcattcttgagacctct 217  Q
    | || || ||||| ||||||    
T  15637000 agttgatccttgatacctct 15636981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 20378089 - 20378176
Alignment:
Q  157 tccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||  ||||||| ||||||||||||||||||| | || || ||| |||||||||||||| |||| |||||||||||||||    
T  20378089 tccttgtgtctccggggttgactccttggttgaattcatttagttgatcctttagacctcttaacgtgacactaaggcaccgaacctt 20378176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 41577924 - 41577870
Alignment:
Q  178 ctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaag 232  Q
    |||||||||||||||||  || ||||| |||||||||||||||||||||||||||    
T  41577924 ctccttggttgaattcagccagttcatccttgagacctcttaacgttacaccaag 41577870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 43477131 - 43477037
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattca 194  Q
    ||||||| |||||  ||||||||||||||||| ||||||||| ||  | || || ||||||| ||||| |||||||| || ||||||||||||||    
T  43477131 tgaatgaaactctcccctcgtcgagcgttggacgtttataccaaaggtgttccaccctccttgtgtctctggggttgacttcttggttgaattca 43477037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 41577980 - 41577919
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctcctt 161  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| |||| || |||||||    
T  41577980 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctcctt 41577919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 43477035 - 43476974
Alignment:
Q  182 ttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||| ||| || || ||||||||||||||||| ||||||||||| | |||||||    
T  43477035 ttggttgaattcagtcagttgatccttgagacctcttaacg-tacaccaaggccctgaacctt 43476974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 4095833 - 4095773
Alignment:
Q  138 taccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattca 198  Q
    |||| ||| ||||||| |||||||||||||||| |||||  ||||| ||||| ||||||||    
T  4095833 taccaaacgtatttcaccctccttatgtctatgtggttgagtcctttgttgatttcattca 4095773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 38046580 - 38046724
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  38046580 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 38046679  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  38046680 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 38046724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 5765268 - 5765122
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||| | ||||||||||||||| ||||||||||||| |||| || ||||||| | |||  ||||||| ||||||||||||||||||||    
T  5765268 actgaatgatattcttccatcgtcgagcgttggacgtttataccgaacgtattccaccctccttgtatctccggggttgactccttggttgaattcattc 5765169  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||||| ||||||||||||||||||||||||||| |||||||||||    
T  5765168 agttcatccttgagacctcttaacgttacaccaagacaccgaacctt 5765122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 115 - 244
Target Start/End: Complemental strand, 17372772 - 17372643
Alignment:
Q  115 cctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacc 214  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| ||  |||| |||||||| ||||||||||| ||||||||| || || |||||||||    
T  17372772 cctcgtcgagcgttggacgtttataccgaacatatttcaccctctttgcgtctctggggttgactccttggttgtattcattcagttgatccttgagacc 17372673  T
Q  215 tcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||||||||||||||||||||    
T  17372672 tcttaacgttacaccaaggcaccgaacctt 17372643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 23342701 - 23342557
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | ||||| | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  23342701 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgtttcaccttccttgtgtctttggggttgactccttggttgaattcaatcag 23342602  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| | ||||||||||||| |||||||||||||||||||||||    
T  23342601 ttcatccctgagacctcttaatgttacaccaaggcaccgaacctt 23342557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 35185030 - 35184886
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| ||||| || ||||||||||||||||| |||     
T  35185030 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctttggggctgactccttggttgaattcagtcag 35184931  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||    
T  35184930 ttcatccttgatacctcttaacgttacaccaaggcaccgaacctt 35184886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 248
Target Start/End: Original strand, 35526323 - 35526471
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||   || || ||||| | |||||  ||||||| ||||||||||||||||| ||      
T  35526323 tgaatgatactctctcctcgtcgagcgttggacgtttataccgaacgcgttccaccctccctgtgtctccggggttgactccttggttgaattcagtcgg 35526422  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaac 248  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35526423 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctttaac 35526471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 35587075 - 35587219
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  35587075 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 35587174  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||  ||||||||||||||||||||||    
T  35587175 ttcatccttgagacctcttaattttacaccaaggcaccgaacctt 35587219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 49396764 - 49396620
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||  | ||||||| ||||||||||||| | || || |||||||||||||||||||||| ||| ||||||||||||| |||     
T  49396764 tgaatgatactctcccctcgtaaatcgttggacgtttataccgaacgtgttccaccctccttatgtctatggggttgactcgttggttgaattcagtcag 49396665  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  49396664 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 49396620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 100 - 243
Target Start/End: Original strand, 24270509 - 24270652
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||| ||||| |||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  24270509 tgaatgatactctcccctcatcgagtgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 24270608  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacct 243  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  24270609 ttcatccttgagacctcttaacgttacaccaaggcaccgaacct 24270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 6435832 - 6435688
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  6435832 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgttttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 6435733  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||  ||||||| ||||||| |||||||||||||||||||||||    
T  6435732 ttcaaccttgagaactcttaatgttacaccaaggcaccgaacctt 6435688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 36909621 - 36909477
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||||||| |||| || ||||||||||||| | |||||| ||||||||||||||| | |||     
T  36909621 tgaatgatgctcttccctcgtcgagcgttggacgtttacaccgaacgtattccaccctccttatgtctctagggttgactccttggttgaattgagtcag 36909522  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||||||||||||||||||||||| |||||||||||||||    
T  36909521 tttatccttgagacctcttaacgttacactaaggcaccgaacctt 36909477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 18842497 - 18842355
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    ||||||| |||| |||| |||||||||||| ||||||||||||| |||| || ||||||| |||||  ||||||| ||  ||||||||||||||||| ||    
T  18842497 aatgatattcttccctcatcgagcgttggacgtttataccgaacgtattccaccctccttgtgtctccggggttgactatttggttgaattcattcagtt 18842398  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||| |||||||||||||||||||||||||| ||||||||||||    
T  18842397 catccttgagacctcttaacgttacaccaaagcaccgaacctt 18842355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 29436033 - 29435892
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  | ||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  29436033 tgaatgatactctcccatcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 29435934  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||    
T  29435933 ttcatccttgagacctcttaatgttacaccaagacaccgaac 29435892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 13635443 - 13635587
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  13635443 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactccttggttgaattcagtcag 13635542  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || ||  ||||||||||||||||||||||||||||||||||||||    
T  13635543 tttatctttgagacctcttaacgttacaccaaggcaccgaacctt 13635587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 27035464 - 27035608
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||| ||||||||||||||||| |||||||||| || |||| || ||||||| ||||| |||||||| |||||||||||||||||||||     
T  27035464 tgaatgatacccttccctcgtcgagcgttggacgtttataccggacgtattccaccctccttgtgtctctggggttgactccttggttgaattcattcaa 27035563  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||||||||||||||| |||||| |||| |||| ||||||    
T  27035564 ttgatccttgagacctcttaatgttacatcaagacacctaacctt 27035608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 29762367 - 29762511
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| ||||||||||||  | || || ||||||| ||||| | |||||| ||||||||||||||||| |||     
T  29762367 tgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctagggttgactccttggttgaattcagtcag 29762466  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||    
T  29762467 ttcatccttgagacctcttaacgttacaccaaggcatcgaacctt 29762511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 244
Target Start/End: Complemental strand, 41780737 - 41780609
Alignment:
Q  116 ctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacct 215  Q
    |||||||||||||||| ||||||||||||| | || || ||| ||| ||||| |||||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  41780737 ctcgtcgagcgttggacgtttataccgaacgtgttccacccttcttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacct 41780638  T
Q  216 cttaacgttacaccaaggcaccgaacctt 244  Q
    |||||||||||||||||||||| ||||||    
T  41780637 cttaacgttacaccaaggcaccaaacctt 41780609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 41875030 - 41875174
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||| |||||| ||||| ||| |||||||||  ||| || ||||||| ||||| |||||||| |||||||||||||||||||||     
T  41875030 tgaatgatactctcccctcttcgagcattggacgttgataccgaactaattccaccctccttgtgtctttggggttgactccttggttgaattcattcag 41875129  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| ||||||||||||||||    
T  41875130 ttgatccttgagacctcttaacgttacatcaaggcaccgaacctt 41875174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 47488183 - 47488327
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  ||||||||||||||||| ||||||||||||| |||| || |||||||   ||| |||||||| ||||||| |||||||||||||     
T  47488183 tgaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctccttgcatctctggggttgactccttgattgaattcattcag 47488282  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| ||||||||||||||||    
T  47488283 ttgatccttgagacctcttaacgttacatcaaggcaccgaacctt 47488327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 13283763 - 13283622
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    |||||||||||  ||||||||||||||||| ||||||||||||| |||| || ||||||  |||||  ||| ||| |||||||||| |||||||||| ||    
T  13283763 aatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctcctcgtgtctccggg-ttgactccttggttaaattcattcagtt 13283665  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||| ||||||||||||||| |||||||||||||||||||||||    
T  13283664 catccttgagacctcttaatgttacaccaaggcaccgaacctt 13283622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 51269864 - 51269718
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||| |||||  ||||||||||||||||| |||||||| |||  | || || ||||||| ||||| |||||||| ||||||||||||||||| ||    
T  51269864 actgaatgaaactctcccctcgtcgagcgttggacgtttatacagaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtc 51269765  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||||| |||||||||||||||||||||||||||||| | ||||||    
T  51269764 agttcatccttgagacctcttaacgttacaccaaggcatcaaacctt 51269718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 12791419 - 12791564
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||| ||| ||||| |||||||| ||||||||||||||||| |||     
T  12791419 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctacttgtgtctctggggttgactccttggttgaattcagtcag 12791518  T
Q  200 ttcattcttgagacctcttaacgttacacc-aaggcaccgaacctt 244  Q
     |||| ||||||||||||||| |||||||| |||||||||||||||    
T  12791519 ctcatccttgagacctcttaatgttacaccaaaggcaccgaacctt 12791564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 100 - 241
Target Start/End: Original strand, 30309972 - 30310113
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  || ||||||| |||||| ||||||||||||| | || || |||||||||||||||||||||| |||||||||||||||||   |     
T  30309972 tgaatgataccctccccccgtcgagtgttggacgtttataccgaacgtgttccaccctccttatgtctatggggttgactccttggttgaattcagcgag 30310071  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
T  30310072 ttcatcctttagacctcttaacgttacaccaaggcaccgaac 30310113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 44597761 - 44597620
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| ||||||||||||  | || || ||||||| ||||| |||||||| || |||||||||||||| |||     
T  44597761 tgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgacttcttggttgaattcagtcag 44597662  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    || || ||||||||||||||||||||||||||||||||||||    
T  44597661 ttgatccttgagacctcttaacgttacaccaaggcaccgaac 44597620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 48215258 - 48215117
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || | ||||| ||||| || ||||| ||||||||||||||||| |||     
T  48215258 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccatccttgtgtctgtgaggttgactccttggttgaattcagtcag 48215159  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    ||||  ||||||||||||||| ||||||||||||||||||||    
T  48215158 ttcagccttgagacctcttaatgttacaccaaggcaccgaac 48215117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 14173904 - 14174048
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  |||| |||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||| | |||     
T  14173904 tgaatgatattctcccctcatcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattaagtcag 14174003  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||    
T  14174004 ttcatccttgagatctcttaacgttacaccaaagcaccgaacctt 14174048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 42571922 - 42572066
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||| ||||| ||||||||||||| | || || ||||||| ||||| || ||||| |||||||||||| |||| |||     
T  42571922 tgaatgatactctcccctcgtcgagcattggacgtttataccgaacgtgttccaccctccttgtgtctctgaggttgactccttggttgagttcagtcag 42572021  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||    
T  42572022 ttcatccttgagacctcttaacattacaccaaggcatcgaacctt 42572066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 44337465 - 44337609
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| ||||||||||||  | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  44337465 tgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcag 44337564  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||| ||||||||||||||||||    
T  44337565 ttgatccttgagacctcttaacgttataccaaggcaccgaacctt 44337609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 48568550 - 48568694
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  ||||||||||||||||| |||||||||||||  ||| || ||||||| ||||| |||||||| |||||||||||| ||||||||     
T  48568550 tgaatgatattctcccctcgtcgagcgttggacgtttataccgaactaattccaccctccttgtgtctttggggttgactccttggttgagttcattcag 48568649  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || |||||||| | |||||||||||||| ||||||||| ||||||    
T  48568650 ttgattcttgatatctcttaacgttacatcaaggcaccaaacctt 48568694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 18170085 - 18169941
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||| | ||||||||||||| | || || ||||||| ||||| |||||||  ||||||||||||||||| | |     
T  18170085 tgaatgatactctcccctcgtcgagcgttgaacgtttataccgaacgtgttccaccctccttgtgtctctggggttaactccttggttgaattcagtgag 18169986  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||| | ||||||||||||||||||||| |||||||||||    
T  18169985 ttcatcctttaaacctcttaacgttacaccaagacaccgaacctt 18169941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 19160377 - 19160233
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||| ||| ||||||||| ||||||||| ||| | || || | ||||  ||||| |||||||| ||||||||||||||||| |||     
T  19160377 tgaatgatactctccccttgtcaagcgttggacgtttataccaaacgtgttccaccatcctcgtgtctctggggttgactccttggttgaattcagtcag 19160278  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||||||||||||||||    
T  19160277 tttatccttgagacctcttaacgttacaccaaggcaccgaacctt 19160233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 50068405 - 50068549
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||   ||||||||| ||||||  || |||||||||||||| || |||||||  |||| |||||||| ||| |||||||||||||||||     
T  50068405 tgaatgatactctccactcgtcgagtgttggaccttcataccgaacatattccaccctccttgcgtctctggggttgactcgttggttgaattcattcag 50068504  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||| ||||| ||||||||||||||||    
T  50068505 ttgatccttgagacctcttaacattacatcaaggcaccgaacctt 50068549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 16532238 - 16532377
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    ||||||| ||| ||||| |||||||||| | ||||||| ||||| |||| |||||||||| |||||  || |||| ||||||||||||||||||| | ||    
T  16532238 aatgatattctctcctcatcgagcgttgtacgtttatatcgaacgtattccatcctccttgtgtctccggagttgactccttggttgaattcatttaatt 16532337  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
     || ||||||| ||||||||||||||||||||||||||||    
T  16532338 gatccttgagatctcttaacgttacaccaaggcaccgaac 16532377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 244
Target Start/End: Original strand, 27486851 - 27486980
Alignment:
Q  115 cctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacc 214  Q
    ||||||||||||||||| ||||||||||||  |  |  | ||||||| ||||| |||||||| |||||||||| |||||| ||| ||||| |||||||||    
T  27486851 cctcgtcgagcgttggacgtttataccgaaggtgatctaccctccttgtgtctctggggttgactccttggtttaattcagtcagttcatccttgagacc 27486950  T
Q  215 tcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||||||||||||||||||| |||||||    
T  27486951 tcttaacgttacaccaaggcactgaacctt 27486980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 49427447 - 49427307
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||||||||||  |||||||||||| | |  || | ||||| | ||| |||||||| ||||||||||||||||| |||     
T  49427447 tgaatgatactctcccctcgtcgagcgttggacatttataccgaacgtgtaacaccatccttgtatctctggggttgactccttggttgaattcagtcag 49427348  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  49427347 ttcatccttgagacctcttaacgttacaccaa-gcaccgaac 49427307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 13972984 - 13972841
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||| |||||| |||||| |||||||| |||| |||| || |||||||  |||| |||||||| ||||||| ||||||||| |||     
T  13972984 tgaatgatactctcccctagtcgagtgttggacgtttatactgaacgtattccaccctccttgcgtctctggggttgactccttg-ttgaattcagtcag 13972886  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||    
T  13972885 ttcatccttgagacctcttaaagttacaccaaggcgccgaacctt 13972841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 21484787 - 21484903
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||  ||||| ||||||| ||||| |||||||| ||||||||||||||||| ||    
T  21484787 actgaatgatactctcccctcgtcgagcgttggacgtttataccgaacaagtttcaccctccttgtgtctttggggttgactccttggttgaattcagtc 21484886  T
Q  198 atttcattcttgagacc 214  Q
    | ||||| ||| |||||    
T  21484887 agttcatcctttagacc 21484903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 4209256 - 4209171
Alignment:
Q  155 cctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaa 240  Q
    ||||||| ||||| |||||||| ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||    
T  4209256 cctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgttacaccaaggcaccgaa 4209171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 39224343 - 39224480
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  |||||| ||||||| || ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| | |     
T  39224343 tgaatgataccctcccctcgttgagcgttagacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtgag 39224442  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcacc 237  Q
    ||||| ||| ||||||||||||||||||||||| ||||    
T  39224443 ttcatcctttagacctcttaacgttacaccaagacacc 39224480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 17697106 - 17696962
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  ||| ||||||| ||||| ||||||||| ||| | || || ||||||||||||| |||  ||| |||||||||||||||||||||     
T  17697106 tgaatgataccctacccttgtcgagcattggacgtttataccaaacgtgttccaccctccttatgtctctggcattgactccttggttgaattcattcag 17697007  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||| |  |||||||||||||||    
T  17697006 ttgatccttgagacctcttaacgttatatgaaggcaccgaacctt 17696962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 244
Target Start/End: Original strand, 46181731 - 46181842
Alignment:
Q  133 gtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaag 232  Q
    ||||||||||||| |||| || | |||||  |||| |||||||| ||||||||||||||||||||| || || |||||||||||||||| ||||| ||||    
T  46181731 gtttataccgaacgtattccaccttccttgcgtctctggggttgactccttggttgaattcattcaattgatccttgagacctcttaacattacatcaag 46181830  T
Q  233 gcaccgaacctt 244  Q
    ||||||||||||    
T  46181831 gcaccgaacctt 46181842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 233
Target Start/End: Original strand, 39857055 - 39857185
Alignment:
Q  103 atgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttc 202  Q
    ||||||||||  ||||||||||| ||||| ||||||||||||||| || || ||| ||| |||||    ||||| |||||| |||||||||| ||| |||    
T  39857055 atgatactctcccctcgtcgagcattggacgtttataccgaacatgttccacccttcttgtgtctccttggttgactcctttgttgaattcagtcagttc 39857154  T
Q  203 attcttgagacctcttaacgttacaccaagg 233  Q
    || ||||||||||||||||||||||||||||    
T  39857155 atccttgagacctcttaacgttacaccaagg 39857185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 45689179 - 45689040
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  || |||||||||||||| ||| |  || |||||||| || ||||||| ||||| |||||||| ||| |||||||| ||||||||     
T  45689179 tgaatgatattctccccccgtcgagcgttggacgttaa--ccaaacatattccaccctccttgtgtctttggggttgactctttggttgagttcattcag 45689082  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    || || |||||||||||||||||||||| |||||||||||||    
T  45689081 ttgatccttgagacctcttaacgttacatcaaggcaccgaac 45689040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 13148295 - 13148207
Alignment:
Q  156 ctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| || || ||||||||||||||| |||||| ||||||| ||||||||    
T  13148295 ctccttgtgtctctggggttgactccttggttgaattcattcagttgatccttgagacctcttaaggttacatcaaggcatcgaacctt 13148207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 49599020 - 49599134
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||| |||| | ||||||||||||| |||| || |||||||  |||| |||||||| ||||||||||||||||||| |     
T  49599020 tgaatgatactctcccctcgtcgagtgttgaacgtttataccgaacgtattccaccctccttgcgtctctggggttgactccttggttgaattcatttag 49599119  T
Q  200 ttcattcttgagacc 214  Q
    || || |||||||||    
T  49599120 ttgatccttgagacc 49599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 17686507 - 17686637
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | ||  | ||||||| ||||| |||||||| ||||||||                  
T  17686507 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttctaccctccttgtgtctctggggttgactccttgg-------------- 17686592  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  17686593 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 17686637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 24364001 - 24364064
Alignment:
Q  180 ccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacct 243  Q
    |||||| |||||||||||| || || ||||||||||||||||||||||||||||||||||||||    
T  24364001 ccttggatgaattcattcagttgatccttgagacctcttaacgttacaccaaggcaccgaacct 24364064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 16098076 - 16098198
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||  | ||||||||||||||| ||||||||||||| |||| || ||||||| |||||   |||||| || |||||||||||||||||    
T  16098076 actgaatgatattctcccatcgtcgagcgttggacgtttataccgaacgtattccaccctccttgtgtctccagggttgactacttggttgaattcattc 16098175  T
Q  198 atttcattcttgagacctcttaa 220  Q
    | || ||  |||| |||||||||    
T  16098176 agttgatctttgatacctcttaa 16098198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 37778097 - 37778008
Alignment:
Q  155 cctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||| ||||| | |||||| ||||||| ||||||||| ||| ||||| |||||||| ||||| ||||||||||| ||||||||||||    
T  37778097 cctccttgtgtctctagggttgactccttgattgaattcagtcagttcatccttgagacatcttagcgttacaccaatgcaccgaacctt 37778008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 3658533 - 3658488
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaac 145  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||    
T  3658533 tgaatgatactctctcctcgtcgagcgttggacgtttataccgaac 3658488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 35576399 - 35576305
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattca 194  Q
    ||||||||| |||  |||| |||||||||||| ||||||||||||| | || || ||||||| |||||   |||||| ||| |||||||||||||    
T  35576399 tgaatgatattctcccctcatcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctccagggttgactctttggttgaattca 35576305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 15471563 - 15471455
Alignment:
Q  115 cctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacc 214  Q
    ||||||||| ||||||||||| ||||| ||| |||| ||  |||||| |||||  |||||||   |||||||||| |||||||| || || ||||| |||    
T  15471563 cctcgtcgaacgttggatgttcataccaaacgtattccacactccttgtgtctccggggttgagaccttggttgatttcattcagttgatccttgacacc 15471464  T
Q  215 tcttaacgt 223  Q
    | |||||||    
T  15471463 ttttaacgt 15471455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 49926597 - 49926657
Alignment:
Q  184 ggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||| ||| ||||| ||| |||||| ||||||| |||||||||||| |||||||    
T  49926597 ggttgaattcagtcagttcatccttaagaccttttaacgtcacaccaaggcactgaacctt 49926657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 49263134 - 49263179
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaac 145  Q
    |||||||||||||  |||||| |||||||||| |||||||||||||    
T  49263134 tgaatgatactctcccctcgttgagcgttggacgtttataccgaac 49263179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 49926526 - 49926571
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaac 145  Q
    ||||||| |||||  ||||||||||||||||| |||||||||||||    
T  49926526 tgaatgacactctcccctcgtcgagcgttggacgtttataccgaac 49926571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 49263207 - 49263247
Alignment:
Q  185 gttgaattcattcatttcattcttgagacctcttaacgtta 225  Q
    |||||||||| ||| ||||| ||||||||||||||||||||    
T  49263207 gttgaattcagtcagttcatccttgagacctcttaacgtta 49263247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 6e-43; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 100 - 252
Target Start/End: Original strand, 6793534 - 6793686
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||||||  ||||||||||||||| |  ||||||||||||  | || |||||||||| ||||| |||||||| ||||||||||||||||| |||     
T  6793534 tgaatgatactcactcctcgtcgagcgttaggcgtttataccgaatgtgttccatcctccttgtgtctctggggttgactccttggttgaattcagtcag 6793633  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaacttct 252  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  6793634 ttcatccttgagacctcttaacgttacaccaaggcaccgaaccttcaacttct 6793686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 35565331 - 35565187
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||||||| || ||||||||||||| | || || ||||||||||||| |||||||| ||||||||||||||||| |||     
T  35565331 tgaatgatactctcccctcgtcgagcgttagacgtttataccgaacgtgttccaccctccttatgtctctggggttgactccttggttgaattcagtcag 35565232  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||| | |||||||||||||||||||||||||||||||||||||||    
T  35565231 ttcgtccttgagacctcttaacgttacaccaaggcaccgaacctt 35565187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 541783 - 541927
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||  | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  541783 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 541882  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||    
T  541883 ttcatccttgagacctcttaacgttacaccaaggcatcgaacctt 541927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 1400450 - 1400594
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| |||||  ||||||| ||||||||||||||||| |||     
T  1400450 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagtcag 1400549  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||  ||||||||||||||||||||||||||||||||||||||    
T  1400550 ttcatcattgagacctcttaacgttacaccaaggcaccgaacctt 1400594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 8538013 - 8537869
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||| | ||||||||||||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  8538013 tgaatgatactctcccctcgtcgagcgttgaacgtttataccgaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcag 8537914  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  8537913 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 8537869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 11346768 - 11346624
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  11346768 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcag 11346669  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  11346668 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 11346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 18308319 - 18308175
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  18308319 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 18308220  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||| |||||||||||||||||||||| |||||||    
T  18308219 ttcatccttgagacttcttaacgttacaccaaggcactgaacctt 18308175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 40009587 - 40009443
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| |||| || |||||||  |||| | |||||| ||||||||||||||||||||||    
T  40009587 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctccttgcgtctctagggttgactccttggttgaattcattcat 40009488  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| |||| |||||||||||    
T  40009487 ttgatccttgagacctcttaacgttacatcaagacaccgaacctt 40009443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 11027836 - 11027692
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  11027836 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactccttggttgaattcagtcag 11027737  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||||||||||||||||    
T  11027736 tttatccttgagacctcttaacgttacaccaaggcaccgaacctt 11027692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 38854217 - 38854073
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  38854217 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactccttggttgaattcagtcag 38854118  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||||||||||||||||    
T  38854117 tttatccttgagacctcttaacgttacaccaaggcaccgaacctt 38854073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 7377 - 7521
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| |||||||||| |||||| |||     
T  7377 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttcaattcagtcag 7476  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||    
T  7477 ttcatccttgagatctcttaacgttacaccaaggcaccgaacctt 7521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 3458895 - 3458751
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||| |||||||||  |||||||||||| |||| || |||||||  |||| |||||||| |||||||||||||||||||||     
T  3458895 tgaatgatactctcccctcgtcaagcgttggacatttataccgaacgtattccaccctccttgcgtctttggggttgactccttggttgaattcattcag 3458796  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| |||||| |||||||||    
T  3458795 ttgatccttgagacctcttaacgttacatcaaggcgccgaacctt 3458751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 3601400 - 3601256
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| |||||||||||| || ||  | ||||||| ||||| |||||||| ||||||| ||||||||| |||     
T  3601400 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaatatgttctaccctccttgtgtctctggggttgactccttgattgaattcagtcag 3601301  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||  ||||||||||||||||||||||||||||||| ||||||    
T  3601300 ttcatctttgagacctcttaacgttacaccaaggcaccaaacctt 3601256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 8576289 - 8576433
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  8576289 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcag 8576388  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||| ||||||||||||    
T  8576389 tttatccttgagacctcttaacgttacaccaaagcaccgaacctt 8576433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 19400422 - 19400278
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  |||| |||||||||||| ||||||||||||| |||| || | ||||| ||||| |||||||| |||||||||||||||||||||     
T  19400422 tgaatgacactctcccctcatcgagcgttggacgtttataccgaacgtattccaccatccttgtgtctctggggttgactccttggttgaattcattcag 19400323  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||| ||||||||| ||||||||||||||||    
T  19400322 ttgatccttgagacctctcaacgttacatcaaggcaccgaacctt 19400278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 30709657 - 30709513
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| | ||| |||||||| ||||||||||||||||| |||     
T  30709657 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtatctttggggttgactccttggttgaattcagtcag 30709558  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||||||||||||||||    
T  30709557 tttatccttgagacctcttaacgttacaccaaggcaccgaacctt 30709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 17366886 - 17367027
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    ||||||| |||| |||| ||||| |||||| ||||||| ||||| |||| || ||||||| |||||| ||||||| ||||||||| ||||||||||| ||    
T  17366886 aatgatattcttccctcatcgagggttggacgtttatatcgaac-tattccaccctccttgtgtctacggggttgactccttggtagaattcattcagtt 17366984  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||| ||||||||||||||||||||||||||| |||||||||||    
T  17366985 catccttgagacctcttaacgttacaccaagacaccgaacctt 17367027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 28881052 - 28880906
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  ||||||||||||||||| |||| |||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| ||    
T  28881052 actgaatgatactctcccctcgtcgagcgttggacgtttgtaccaaatgttttccaccatccttgtgtctctggggttgactccttggttgaattcagtc 28880953  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | || || |||||||||||||||||||||||||||||||||||||||    
T  28880952 agtttatccttgagacctcttaacgttacaccaaggcaccgaacctt 28880906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 1971424 - 1971280
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || ||||||| |||||  ||||||| ||||||||||||||||| |||     
T  1971424 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagtcag 1971325  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||| ||||||||| | ||||||    
T  1971324 ttcatccttgagacctcttaacgttataccaaggcatcaaacctt 1971280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 36350453 - 36350597
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||| | ||||||||||||| | || || ||||||| ||||| |||||||| ||| ||||||||||||| |||     
T  36350453 tgaatgatactctcccctcgtcgagcgttgaacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactctttggttgaattcagtcag 36350552  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| || || |||||||||||||||||||||||||| ||||||    
T  36350553 ttcatcctggacacctcttaacgttacaccaaggcaccaaacctt 36350597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 240
Target Start/End: Original strand, 35927587 - 35927725
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    |||||||||||| ||||||||||| ||||| ||||||| ||||| | || || |||  || |||||  | ||||| ||||||||||||||||||||| ||    
T  35927587 aatgatactcttccctcgtcgagcattggacgtttataacgaacgtgttacaccctaattgtgtctccgaggttgactccttggttgaattcattcagtt 35927686  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaa 240  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  35927687 catccttgagacctcttaacgttacaccaaggcaccgaa 35927725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 4724222 - 4724366
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||| |||||||||||| ||||||||||||  | || ||   ||||| ||||| |||||||| ||||||||||||||||| |||     
T  4724222 tgaatgatactctcccctcatcgagcgttggacgtttataccgaatgtgttccactttccttgtgtctctggggttgactccttggttgaattcagtcag 4724321  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||  | |||||||||||||||||||||||||||||||||||||||    
T  4724322 tttttccttgagacctcttaacgttacaccaaggcaccgaacctt 4724366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 2599280 - 2599130
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| ||| || |||||||  |||||| ||||||||||||| |||| || ||||||| |||||  ||||||| ||||||||||||||||||||    
T  2599280 actgaatgatattctctcatcgtcgaatgttggacgtttataccgaacgtattccaccctccttgtgtctccggggttgactccttggttgaattcattc 2599181  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaac 248  Q
    | || || ||||||| ||||||| || ||||||||| ||| ||||||||||    
T  2599180 agttgatccttgagatctcttaaggtgacaccaaggtaccaaacctttaac 2599130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 19036820 - 19036966
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| |||||| |||||||||| ||    
T  19036820 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactcctttgttgaattcagtc 19036919  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  19036920 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 19036966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 27661527 - 27661669
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    |||||||||||  |||||||||||  |||| ||||||||  ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| ||| ||    
T  27661527 aatgatactctcccctcgtcgagcaatggaagtttatactaaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtt 27661626  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
     || |||||||||||||||||||||||||||||||||||||||    
T  27661627 tatccttgagacctcttaacgttacaccaaggcaccgaacctt 27661669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 33370711 - 33370572
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    ||||||| |||  ||||||||||||||| | ||||||| ||||| |||| || ||||||| |||||  |||||||  ||| | ||| |||||||||| ||    
T  33370711 aatgatattctcccctcgtcgagcgttgaacgtttatatcgaacgtattccaccctccttgtgtctccggggttgagtccctagttaaattcattcagtt 33370612  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  33370611 catccttgagacctcttaacgttacaccaaggcaccgaac 33370572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 241
Target Start/End: Complemental strand, 7082332 - 7082210
Alignment:
Q  119 gtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctctt 218  Q
    ||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| | | ||||| ||| |||||||||    
T  7082332 gtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtgagttcatcctttagacctctt 7082233  T
Q  219 aacgttacaccaaggcaccgaac 241  Q
    |||||||  ||||||||||||||    
T  7082232 aacgttaagccaaggcaccgaac 7082210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 12742776 - 12742630
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| | | || |||| |||||||||| ||||||||||||| |||| || ||| ||| |||||  ||||||| |||||||||||||||||||     
T  12742776 actgaatgatattatctcatcgttgagcgttggacgtttataccgaacgtattccacccttcttgtgtctccggggttgactccttggttgaattcattt 12742677  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | || || ||||| |||||||||||| |||||||||  |||||||||    
T  12742676 agttgatccttgatacctcttaacgtgacaccaaggtgccgaacctt 12742630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 12805594 - 12805448
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| | | || || | |||||||||| ||||||||||||| |||| || ||| ||| |||||  ||||||| |||||||||||||||||||     
T  12805594 actgaatgatattatctcatcattgagcgttggacgtttataccgaacgtattccacccttcttgtgtctccggggttgactccttggttgaattcattt 12805495  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | || || ||||| |||||||||||| |||||||||  |||||||||    
T  12805494 agttgatccttgatacctcttaacgtgacaccaaggtgccgaacctt 12805448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 1691249 - 1691160
Alignment:
Q  155 cctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||| |||||||| ||||| ||||||||||||||||| ||| ||||| ||||| || ||||||| |||||||||||||| |||||||    
T  1691249 cctccttgtgtctatgaggttgactccttggttgaattcagtcagttcatccttgaaacttcttaactttacaccaaggcactgaacctt 1691160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 3169662 - 3169569
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattca 194  Q
    |||||||||||||  |||||||||||||| || ||||||||||||| | || || |||| |||||||| |||||||| |||||||||||| ||||    
T  3169662 tgaatgatactctc-cctcgtcgagcgttagacgtttataccgaacgtgttccaccctctttatgtctctggggttgactccttggttgagttca 3169569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 25498375 - 25498309
Alignment:
Q  178 ctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||| |||||| || | | ||||| |||||||||||||||| ||||||||||||||||||||||    
T  25498375 ctccttgattgaatgcagtgagttcatccttgagacctcttaacattacaccaaggcaccgaacctt 25498309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 6e-43; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 49423905 - 49424049
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  |||||||||||| ||||  |||||||||||||| || || ||||||| |||||||||||||| ||||||||||||||||| |||     
T  49423905 tgaatgataatctcccctcgtcgagcgctggacatttataccgaacatgttccaccctccttgtgtctatggggttgactccttggttgaattcagtcag 49424004  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  49424005 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 49424049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 32938047 - 32938193
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||  | |||||||| |||||| ||||||||||||| | || || ||||||| |||||||| ||||| ||||||||||||||||||||    
T  32938047 actgaatgatattctcccttcgtcgagtgttggacgtttataccgaacgtgttccaccctccttgtgtctatgtggttgactccttggttgaattcattc 32938146  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||    
T  32938147 agttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 32938193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 242563 - 242707
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||| ||||  |||||||||| |||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  242563 tgaatgatgctctcccctcgtcgagtgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 242662  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  242663 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 242707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 248
Target Start/End: Original strand, 957602 - 957750
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  |||||||||||||||||  ||||||| ||||||||| || |||||||||||||  ||||||| ||||||||||||||||| |||     
T  957602 tgaatgatacgctcccctcgtcgagcgttggacatttatacagaacatattccaccctccttatgtctccggggttgactccttggttgaattcagtcag 957701  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaac 248  Q
    ||||| |||||||||||||||| ||||||||||||||| ||||||||||    
T  957702 ttcatccttgagacctcttaacattacaccaaggcaccaaacctttaac 957750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 21169511 - 21169367
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||| | || || ||||||| ||||| |||||||| |||| |||||||||||| |||     
T  21169511 tgaatgatactctcccctcgtcgagcgttggatgtttatatcgaacgtgttccaccctccttgtgtctctggggttgactccgtggttgaattcagtcaa 21169412  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  21169411 ttcatccttgagacctcttaacattacaccaaggcaccgaacctt 21169367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 22436971 - 22436827
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  22436971 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 22436872  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||    
T  22436871 ttcatccttgagacctcttaacgttataccaaggcatcgaacctt 22436827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 248
Target Start/End: Original strand, 43889646 - 43889794
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  43889646 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 43889745  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaac 248  Q
    |||||  ||||||||||||||||||||||| ||||||| ||||||||||    
T  43889746 ttcatcattgagacctcttaacgttacacccaggcaccaaacctttaac 43889794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 49792083 - 49792227
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||| |||||||  | ||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  49792083 tgaataatactctcccatcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcaatcag 49792182  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  49792183 ttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 49792227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 21017324 - 21017468
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  21017324 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcag 21017423  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||||||||||||||||    
T  21017424 tttatccttgagacctcttaacgttacaccaaggcaccgaacctt 21017468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 240
Target Start/End: Original strand, 26591832 - 26591972
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| ||||||| ||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  26591832 tgaatgaaactctcccctcgtcgagcgttggacgtttatatcgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 26591931  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaa 240  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  26591932 ttcattcttgagacctcttaacgttacaccaaggtaccgaa 26591972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 36776666 - 36776810
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||| |||||||  |||||||||||||||||  |||||||| ||| | || || ||||||| |||||||||||||| ||||||||||||||||| |||     
T  36776666 tgaataatactctcccctcgtcgagcgttggacatttatacctaacgtgttccaccctccttgtgtctatggggttgactccttggttgaattcagtcag 36776765  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||    
T  36776766 ttcatccttgcgacctcttaacgttacaccaaggcaccgaacctt 36776810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 37866466 - 37866322
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||||||||||||||||  | || || ||| ||| ||||| || ||||| ||||||||||||||||| |||     
T  37866466 tgaatgatactctcccctcgtcgagcgttggatgtttataccgaatgtgttccacccttcttgtgtctctgaggttgactccttggttgaattcagtcag 37866367  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||    
T  37866366 ttcatccttgagacctcttaacgttacaccaagccaccgaacctt 37866322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 44560327 - 44560471
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  ||||||||||||||||| |||||||| |||| | || || ||||||| ||||| |||||||| |||||||||||||||||||||     
T  44560327 tgaatgatattctcccctcgtcgagcgttggacgtttatactgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcattcag 44560426  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||||    
T  44560427 ttcatccttgagacctcttaacattacaccaaggtaccgaacctt 44560471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 51428339 - 51428483
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||| |||||||| | ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  51428339 tgaatgatactctcccctcgttgagcgttgaacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 51428438  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  51428439 ttcatccttgagacctcttaacgttacaccaaggcaccaaacctt 51428483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 117 - 244
Target Start/End: Complemental strand, 10312315 - 10312188
Alignment:
Q  117 tcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctc 216  Q
    |||||||| |||| |||||||||||||||||||| ||  |||||| |||||  ||||||| ||||||||||||||||||||| ||||| ||| |||||||    
T  10312315 tcgtcgagtgttgtatgtttataccgaacatattccacactccttgtgtctccggggttgactccttggttgaattcattcagttcatccttcagacctc 10312216  T
Q  217 ttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||||||||||||||||||    
T  10312215 ttaacgttacaccaaggcaccgaacctt 10312188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 34153433 - 34153579
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaa--ttcattc 197  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| |||||||||||||  | || ||    
T  34153433 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaatctccagtc 34153532  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||    
T  34153533 agttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 34153579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 11288353 - 11288211
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    ||||||| |||  ||||||||| ||||||| |||||||| |||| |||| || ||||||| |||||  |||||||  ||| |||||||||||||||||||    
T  11288353 aatgatattctcccctcgtcgaccgttggacgtttatacggaacgtattccaccctccttgtgtcttcggggttgattccctggttgaattcattcattt 11288254  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  11288253 catccttgagacctcttaacgttacaccaaggcaccgaacctt 11288211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 28082298 - 28082154
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||| |||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  28082298 tgaatgatactctcccctcatcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcag 28082199  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  28082198 ttcatccttgagacctcttaacgttacaccaaggcaccaaacctt 28082154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 115 - 244
Target Start/End: Complemental strand, 42886308 - 42886179
Alignment:
Q  115 cctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacc 214  Q
    ||||||||||||||||| ||||||| ||||| | || || ||||||| |||||   |||||| ||||||||||||||||| ||| |||||||||||||||    
T  42886308 cctcgtcgagcgttggaagtttataacgaacgtgttccaccctccttgtgtctcccgggttgactccttggttgaattcagtcagttcattcttgagacc 42886209  T
Q  215 tcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||||||| ||||||||||||    
T  42886208 tcttaacgttacaccaaagcaccgaacctt 42886179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 2773069 - 2772925
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||| |||||||||| ||||||| ||||| | || || | ||||| ||||| | |||||| ||||||||||||||||| |||     
T  2773069 tgaatgatactctcccctcgtagagcgttggacgtttataacgaacgtgttccaccatccttgtgtctctcgggttgactccttggttgaattcagtcag 2772970  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||    
T  2772969 ttcatccttgagatctcttaacgttacaccaaggcaccgaacctt 2772925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 232
Target Start/End: Complemental strand, 17211326 - 17211194
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||| ||||||||| ||||||| ||||||||||||| |||| || ||||||| |||||   |||||| ||||||||||||||||||| |     
T  17211326 tgaatgatattcttccctcgtcgaacgttggacgtttataccgaacgtattccaccctccttgtgtctcatgggttgactccttggttgaattcatttag 17211227  T
Q  200 ttcattcttgagacctcttaacgttacaccaag 232  Q
    ||||| |||||||||||||||||||||||||||    
T  17211226 ttcatccttgagacctcttaacgttacaccaag 17211194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 40353920 - 40354064
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||| ||||||||||||| |||     
T  40353920 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactctttggttgaattcagtcag 40354019  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||||||||| ||||||    
T  40354020 tttatccttgagacctcttaacgttacaccaaggcaccaaacctt 40354064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 51027914 - 51028058
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||| ||||||||||||| ||||||||||||| | || ||  |||||| ||||| ||||||||  |||||||||||||||| |||     
T  51027914 tgaatgatactctccccttgtcgagcgttggacgtttataccgaacgtgttccactctccttgtgtctctggggttgagtccttggttgaattcagtcag 51028013  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||    
T  51028014 ttcatccttgagacctcttaacgttacaccaacgcatcgaacctt 51028058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 6177460 - 6177606
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| ||    
T  6177460 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtc 6177559  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  6177560 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 6177606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 41794707 - 41794853
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| ||    
T  41794707 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtc 41794806  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  41794807 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 41794853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 56138972 - 56138826
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| ||    
T  56138972 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtc 56138873  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  56138872 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 56138826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 120 - 244
Target Start/End: Complemental strand, 3393344 - 3393220
Alignment:
Q  120 tcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctctta 219  Q
    |||||||||||| ||||||| ||||| |||| || ||||||| |||||  ||||||| ||| ||||||||||||||| | || || ||||||||||||||    
T  3393344 tcgagcgttggacgtttatatcgaacgtattccaccctccttgtgtctccggggttgactcattggttgaattcatttagttgatccttgagacctctta 3393245  T
Q  220 acgttacaccaaggcaccgaacctt 244  Q
    |||||||||||||||||||||||||    
T  3393244 acgttacaccaaggcaccgaacctt 3393220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 20779016 - 20779160
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||| |||||||||| ||||||||||||| | || || ||| ||| ||| |  ||||||| |||||||||||||||||||||     
T  20779016 tgaatgatactctcccctcgtagagcgttggacgtttataccgaacgtgttccacccttcttgtgtgtccggggttgactccttggttgaattcattcag 20779115  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||  |||||||||||||||||||||||||| ||| |||||||    
T  20779116 ttcatctttgagacctcttaacgttacaccaagacactgaacctt 20779160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 31824776 - 31824920
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  ||||||||||||||||| ||||||||||||| |||| || |||||||   ||| ||| |||| |||||||||||||||||||||     
T  31824776 tgaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctccttgcatctctggagttgactccttggttgaattcattcag 31824875  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||||||| |||||||| ||||| ||||||||||||||||    
T  31824876 ttgatccttgagagctcttaactttacatcaaggcaccgaacctt 31824920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 34529943 - 34530087
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||| ||||||||||||| ||||||||||||  | || || ||| ||| ||||| |||||||| ||||||||||||||||| |||     
T  34529943 tgaatgaaactctccccttgtcgagcgttggacgtttataccgaaggtgttccacccttcttgtgtctctggggttgactccttggttgaattcagtcag 34530042  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||    
T  34530043 ttcatccttgagatctcttaacgttacaccaaggcatcgaacctt 34530087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 244
Target Start/End: Complemental strand, 45939569 - 45939441
Alignment:
Q  116 ctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacct 215  Q
    |||||||||||||| | ||||||| ||||| | || || ||||||| |||||  ||||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  45939569 ctcgtcgagcgttgaacgtttatatcgaacgtgttccaccctccttgtgtcttcggggttgactccttggttgaattcagtcagttcatccttgagacct 45939470  T
Q  216 cttaacgttacaccaaggcaccgaacctt 244  Q
    |||||||||||||||||||| ||||||||    
T  45939469 cttaacgttacaccaaggcatcgaacctt 45939441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 233
Target Start/End: Complemental strand, 18412657 - 18412522
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||| | ||||||||||||||| ||||||||||||| |||| || ||| ||| |||||  ||||||| ||||||||||||||||||||    
T  18412657 actgaatgatattcttccatcgtcgagcgttggacgtttataccgaacgtattccacccttcttgtgtctccggggttgactccttggttgaattcattc 18412558  T
Q  198 atttcattcttgagacctcttaacgttacaccaagg 233  Q
    | || || ||||| |||||||||||| |||||||||    
T  18412557 agttgatccttgatacctcttaacgtgacaccaagg 18412522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 231
Target Start/End: Original strand, 47657502 - 47657633
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  | ||||||||||||||||||||||||||||| | || || || |||| ||||| ||||||||  ||||||||||||||||  ||     
T  47657502 tgaatgatactctcccatcgtcgagcgttggatgtttataccgaacgtgttccacccaccttgtgtctctggggttgattccttggttgaattcagccag 47657601  T
Q  200 ttcattcttgagacctcttaacgttacaccaa 231  Q
    ||||| ||||||||||||||||||||||||||    
T  47657602 ttcatccttgagacctcttaacgttacaccaa 47657633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 100 - 242
Target Start/End: Original strand, 14330841 - 14330983
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  |||||||||| |||||| ||||||||||||  | || || ||||||| ||||| | | |||| ||||||||||||||||| | ||    
T  14330841 tgaatgataccctcccctcgtcgagtgttggacgtttataccgaaagtgttccaccctccttgtgtctctagcgttgactccttggttgaattcagtgat 14330940  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacc 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  14330941 ttcatcctttagacctcttaacgttacaccaaggcaccgaacc 14330983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 4785569 - 4785713
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||| ||||  ||||||| || ||| || ||||||||||||  | || || ||||||| ||||| |||||||| |||||||||||||||||||||     
T  4785569 tgaatgatgctctcccctcgtcaagggtttgacgtttataccgaatgtgttccaccctccttgtgtctctggggttgactccttggttgaattcattcag 4785668  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||||||||||||||| |||||| ||||||||||||||||    
T  4785669 ttaatccttgagacctcttaaggttacatcaaggcaccgaacctt 4785713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 244
Target Start/End: Original strand, 20901831 - 20901959
Alignment:
Q  116 ctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacct 215  Q
    |||||||| ||||||| ||||||||||||| | ||  | ||||||| |||||   |||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  20901831 ctcgtcgaacgttggacgtttataccgaacgtgttctaccctccttgtgtcttcagggttgactccttggttgaattcaatcagttcatccttgagacct 20901930  T
Q  216 cttaacgttacaccaaggcaccgaacctt 244  Q
    |||||||||||||||||||| ||||||||    
T  20901931 cttaacgttacaccaaggcatcgaacctt 20901959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 39588989 - 39588845
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  || |||||||||||||| |||||||| |||  | || || ||||||| |||||||||||||| ||||||||||||||||| | |     
T  39588989 tgaatgaaactctccccccgtcgagcgttggacgtttatactgaaggtgttccaccctccttgtgtctatggggttgactccttggttgaattcagttag 39588890  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||  ||||||||||||||||||| ||||||||| ||||||||    
T  39588889 ttcatcattgagacctcttaacgttataccaaggcatcgaacctt 39588845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 1226219 - 1226076
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  ||||||||||||||||| ||||||| | ||| |||| || ||||||  ||||| |||||||  |||||||||||||||||||||     
T  1226219 tgaatgataccctcccctcgtcgagcgttggacgtttatagcaaacgtattccaccctcctg-tgtctctggggttaactccttggttgaattcattcag 1226121  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||| ||||||||||||| ||||||||| ||||||    
T  1226120 ttgatccttgagacttcttaacgttacatcaaggcaccaaacctt 1226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 6282470 - 6282614
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||||||| |||| |||||| |||||| ||||||||||||| | || || ||||||| |||||||||||||| |||||| |||||||| | ||      
T  6282470 tgaatgatactctctccttgtcgagtgttggacgtttataccgaacgtgttccaccctccttctgtctatggggttgactcctttgttgaatttagtcgg 6282569  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||| || | ||||| ||| ||||||||    
T  6282570 ttcatccttgagacctcttaatgtcataccaaagcatcgaacctt 6282614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 25762658 - 25762514
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||  | || || ||||||| |||||  ||||||| |||||||||||||||||  ||     
T  25762658 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaatgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagccag 25762559  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||  || ||||||||||||||||||||||  || ||||||||    
T  25762558 ttcatcattaagacctcttaacgttacaccaaaacatcgaacctt 25762514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 33163691 - 33163835
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||| ||||||  |||||| |||||||||| ||||||||||||| |||| || |||| ||  |||| || |  || | |||||||||||||||||||     
T  33163691 tgaatgttactctcccctcgttgagcgttggacgtttataccgaacgtattccaccctcattgcgtctctgagactgacaccttggttgaattcattcag 33163790  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| ||||||||||||||||    
T  33163791 ttgatccttgagacctcttaacgttacatcaaggcaccgaacctt 33163835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 244
Target Start/End: Complemental strand, 31324217 - 31324090
Alignment:
Q  117 tcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctc 216  Q
    ||||||| ||||||| |||||||| |||| |||| ||||||| || |||||  ||||||| || ||||||||||||||| || || || |||||||||||    
T  31324217 tcgtcgaacgttggacgtttatactgaacctattccatcctcattgtgtcttcggggttgactacttggttgaattcatgcaattgatccttgagacctc 31324118  T
Q  217 ttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||| ||||||||| ||||||||||    
T  31324117 ttaacgtgacaccaaggtaccgaacctt 31324090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 262
Target Start/End: Complemental strand, 49064024 - 49063878
Alignment:
Q  115 cctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacc 214  Q
    |||||||||| |||||| ||||||||||||| | || ||  |||||| ||||| |||||||| |||||| |||||||||| | | ||||| ||| |||||    
T  49064024 cctcgtcgagtgttggacgtttataccgaacgtgttccactctccttgtgtctctggggttgactcctttgttgaattcagtgagttcatcctttagacc 49063925  T
Q  215 tcttaacgttacaccaaggcaccgaacctttaacttctctgcttctcc 262  Q
    | |||||||||||||||||||||||||||| ||| ||| || ||||||    
T  49063924 t-ttaacgttacaccaaggcaccgaaccttcaacctctgtggttctcc 49063878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 13866325 - 13866179
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||  | ||||| |  |||||| ||||||||| |||  ||| || ||||||| ||||| |||||||| |||||| |||||||||||||    
T  13866325 actgaatgatattctcccatcgtcaaatgttggacgtttataccaaacgcattccaccctccttgtgtctctggggttgactccttagttgaattcattc 13866226  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | || || |||||||||||||||||| ||||||||| ||||||||||    
T  13866225 agttgatccttgagacctcttaacgtgacaccaaggtaccgaacctt 13866179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 49094807 - 49094661
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| || |||||||||||||| ||    
T  49094807 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactacttggttgaattcagtc 49094708  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || ||||||| ||||||| |||||||||||||||||||||||    
T  49094707 agtgtatccttgagatctcttaatgttacaccaaggcaccgaacctt 49094661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 1042756 - 1042667
Alignment:
Q  155 cctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||| ||||| |||||||| || |||||||||||||| ||| || || |||||||||||||||||||||||||||||||||||||||    
T  1042756 cctccttgtgtctttggggttgacttcttggttgaattcagtcagttgatccttgagacctcttaacgttacaccaaggcaccgaacctt 1042667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 9489739 - 9489595
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| |||||||| |||  | || || ||||||| |||||  |||||||  ||||| |||||||||| | |     
T  9489739 tgaatgaaactctcccctcgtcgagcgttggacgtttatactgaaggtgttccaccctccttgtgtctccggggttgattcctttgttgaattcagttag 9489640  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||| ||||||||||||||||||||||    
T  9489639 ttgatccttgagacctcttaacattacaccaaggcaccgaacctt 9489595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 46816670 - 46816814
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  ||||||||||| ||||| || ||||| |||| |||| || |||||||  |||| |||||||| |||| | ||||||||||||||     
T  46816670 tgaatgataccctcccctcgtcgagcattggacgtgtatactgaacgtattccaccctccttgcgtctctggggttgactccgtagttgaattcattcag 46816769  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||||||| ||||||| |||||| ||||||||||||||||    
T  46816770 ttgatccttgagatctcttaatgttacatcaaggcaccgaacctt 46816814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 13850811 - 13850665
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||  | ||||| | ||||||| ||||||||| ||| |||| || ||||||| ||||| |||||||| ||||||||||||||||||||    
T  13850811 actgaatgatattctcccatcgtcaaacgttggacgtttataccaaacgtattccaccctccttgtgtctctggggttgactccttggttgaattcattc 13850712  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | || || | | ||||||||||| || ||||||||| ||| ||||||    
T  13850711 agttgatccgtaagacctcttaatgtgacaccaaggtaccaaacctt 13850665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 21412674 - 21412816
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    ||||||| |||  |||||| || | ||||| |||||||||| || |||| || ||||||| |||||  | ||||| ||||||||||||||||||||| ||    
T  21412674 aatgatattctcccctcgttgaacattggacgtttataccggacgtattccaccctccttgtgtctccgtggttgactccttggttgaattcattcagtt 21412773  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
     || ||||||||||||||| ||||||| ||||| |||||||||    
T  21412774 gatccttgagacctcttaatgttacactaaggccccgaacctt 21412816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 24606814 - 24606668
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||| |||||||   || |||||||||||||  |||||| ||||| | || || ||||||| |||||  ||||||| || | | |||||||||||||    
T  24606814 actgaataatactctccgcttgtcgagcgttggacatttatatcgaacgtgttccaccctccttgtgtctccggggttgactacctagttgaattcattc 24606715  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||||| |||||||  ||||||||||||||||||||||||||||||    
T  24606714 agttcatccttgagaagtcttaacgttacaccaaggcaccgaacctt 24606668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 55794610 - 55794524
Alignment:
Q  158 ccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||| ||||| || ||||| ||||||||||||||||| ||| || || |||||||||||||||||||||||||||||||||||||||    
T  55794610 ccttgtgtctttgaggttgactccttggttgaattcagtcagtttatccttgagacctcttaacgttacaccaaggcaccgaacctt 55794524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 49817789 - 49817935
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||| ||||||  |||||| |||||||||| |||||||| |||| | || || ||||||| ||||| | |||||| | |  |||| || |||||||    
T  49817789 actgaatgttactctcccctcgtagagcgttggacgtttatactgaacgtgttccaccctccttgtgtctctagggttgacacgctggtagatttcattc 49817888  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||||| |||||||| |||||| |||||||||||||||| ||||||    
T  49817889 agttcatccttgagacatcttaatgttacaccaaggcaccaaacctt 49817935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 13181549 - 13181587
Alignment:
Q  206 cttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13181549 cttgagacctcttaacgttacaccaaggcaccgaacctt 13181587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 21711533 - 21711479
Alignment:
Q  187 tgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    |||||||| | | ||||| ||| ||||||||||||||||||||||||||||||||    
T  21711533 tgaattcagtgagttcatcctttagacctcttaacgttacaccaaggcaccgaac 21711479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 55796803 - 55796762
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttatacc 141  Q
    |||||||||||||  ||||||||||||||||| |||||||||    
T  55796803 tgaatgatactctcccctcgtcgagcgttggacgtttatacc 55796762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 26484647 - 26484506
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| | |     
T  26484647 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctttggggttgactccttggttgaattcagttaa 26484548  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  26484547 ttcatccttgagacctcttaacgttacaccaaggcaccgaac 26484506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 18440439 - 18440583
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||| ||||||||| |||     
T  18440439 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttgattgaattcagtcag 18440538  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  18440539 ttcatccttgagacatcttaacgttacaccaaggcaccgaacctt 18440583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 33799695 - 33799839
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||| |||||||||| || |||||||   |||||||| ||| |||||||||||||||||||||     
T  33799695 tgaatgatactctcccctcgtcgagcgttggacgtttataacgaacatattccaccctccttgcatctatgggattgactccttggttgaattcattcag 33799794  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||| ||||||||||||||||    
T  33799795 ttgatccttgagacctcttaacgttacatcaaggcaccgaacctt 33799839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 19242306 - 19242450
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| | |||||| ||||||||||||||||| |||     
T  19242306 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctcgggttgactccttggttgaattcagtcag 19242405  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||    
T  19242406 ttcatccttgagacctcttaacgttacacaaaggcaacgaacctt 19242450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 19315490 - 19315634
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| | |||||| ||||||||||||||||| |||     
T  19315490 tgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctcgggttgactccttggttgaattcagtcag 19315589  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||    
T  19315590 ttcatccttgagacctcttaacgttacacaaaggcaacgaacctt 19315634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 34615023 - 34614883
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||||| |  ||||||||||||||||| ||||||||||||| | || || ||||||| |||||  ||||||| ||||||||||||||||| |||     
T  34615023 tgaatgatactttcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagtcag 34614924  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaa 240  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  34614923 ttcatccttgagacctcttaacgttacaccaaggcatcgaa 34614883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 485400 - 485546
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||||||||||||||||||||| ||    
T  485400 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttggctccttggttgaattcagtc 485499  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  485500 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 485546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 16575764 - 16575618
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||| |||||   |||||||||||||||| ||||||||||||| |||| || ||||||| |||||  | ||||| |||| |||||||||||||||    
T  16575764 actgaatgaaactctcctctcgtcgagcgttggacgtttataccgaacgtattccaccctccttgtgtcttcgaggttgactccctggttgaattcattc 16575665  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||| | |||||||||||||||||||||||||||| ||||||||||    
T  16575664 agttcgtccttgagacctcttaacgttacaccaaggtaccgaacctt 16575618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 41857120 - 41857262
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    |||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||| ||||||||| ||| ||    
T  41857120 aatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttctgtctctggggttgactccttgattgaattcagtcagtt 41857219  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||| ||| |||||||||||||| ||||||||||| ||||||||    
T  41857220 catccttaagacctcttaacgtcacaccaaggcaacgaacctt 41857262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 100 - 241
Target Start/End: Original strand, 38034069 - 38034210
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||| |||||||| | ||||||||||||| | || || ||||||| ||||| |||||||| |||||||||||| |||| |||     
T  38034069 tgaatgatactctcccctcgtagagcgttgaacgtttataccgaacgtgttccaccctccttgtgtctttggggttgactccttggttgatttcagtcag 38034168  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  38034169 ttcatccttgagacctcttaacgttacaccaaggcatcgaac 38034210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 15032468 - 15032612
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | | ||| ||||| |||||||| ||||||||||||||||| |||     
T  15032468 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatacttgtgtctctggggttgactccttggttgaattcaatcag 15032567  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||||||||| ||||||    
T  15032568 tttatccttgagacctcttaacgttacaccaaggcaccaaacctt 15032612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 248
Target Start/End: Complemental strand, 24861413 - 24861265
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  || |||||||||||||| ||||||||||||  | || || ||||||| ||||| | |||||| ||||||||||||||||| |||     
T  24861413 tgaatgatactctccccccgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctagggttgactccttggttgaattcagtcag 24861314  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaac 248  Q
    ||||| ||||| |||||||||||||||| | ||||||||||||||||||    
T  24861313 ttcatccttgatacctcttaacgttacatccaggcaccgaacctttaac 24861265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 28706286 - 28706430
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  ||||||||||||||||| ||||||||||||| |||| || |||||||  |||| |||||||| ||||||||||||||||||| |     
T  28706286 tgaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctccttgcgtctctggggttgactccttggttgaattcatttag 28706385  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||| ||||| ||||||||||| ||||||||||||||||    
T  28706386 ttgatccttgggaccttttaacgttacatcaaggcaccgaacctt 28706430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 41363726 - 41363582
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||||||| || || |||||||||| | || || ||||||| |||||  ||||||| ||||||||||||||||| |||     
T  41363726 tgaatgatactctcccctcgtcgagcgttagacgtgtataccgaacgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagtcag 41363627  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||    
T  41363626 ttcatccttgagacctcttaacgttactccaaggcatcgaacctt 41363582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 42603524 - 42603380
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  ||||||||||| ||||| ||||||||||||| | || |  ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  42603524 tgaatgataccctcccctcgtcgagcattggacgtttataccgaacgtgttccgccctccttctgtctctggggttgactccttggttgaattcagtcag 42603425  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||    
T  42603424 ttcatccttgagaccttttaacgtcacaccaaggcaccgaacctt 42603380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 26452395 - 26452251
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| ||||||||||||  | || || ||||||| ||||| ||||||||  | |||||||||||||| |||     
T  26452395 tgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgaattcttggttgaattcagtcag 26452296  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || ||||||| |||||||||||||||||||||||||||||||    
T  26452295 ttgatccttgagatctcttaacgttacaccaaggcaccgaacctt 26452251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 41275464 - 41275320
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  |||||||||||||| || ||||||||||||  | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  41275464 tgaatgaaactctcccctcgtcgagcgtttgacgtttataccgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 41275365  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||| |||||||||||| ||||||||||||||| ||||||    
T  41275364 ttcatccttaagacctcttaactttacaccaaggcaccaaacctt 41275320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 44943225 - 44943368
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||| ||||| | || || | ||||| ||||| |||||||  ||||||||||||||||| |||     
T  44943225 tgaatgatactctcccctcgtcgagcgttggacgtttatatcgaacgtgttacaccatccttgtgtctctggggttaactccttggttgaattcagtcaa 44943324  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||    
T  44943325 ttcatccttgagacct-ttaacgttacaccaaggcgccgaacctt 44943368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 115 - 241
Target Start/End: Complemental strand, 43693192 - 43693066
Alignment:
Q  115 cctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacc 214  Q
    ||||| ||||||||||| ||||||||||||| | || || ||||||| ||||| |||||||| ||||||||||||||||| | | ||||| ||| |||||    
T  43693192 cctcgccgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtgagttcatcctttagacc 43693093  T
Q  215 tcttaacgttacaccaaggcaccgaac 241  Q
    |||||| ||||||||||||||||||||    
T  43693092 tcttaatgttacaccaaggcaccgaac 43693066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 22548333 - 22548189
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| ||||||| ||||  | || || ||||||| ||||| |||||||| |||||| |||||||||| |||     
T  22548333 tgaatgaaactctcccctcgtcgagcgttggacgtttatatcgaatgtgttccaccctccttgtgtctctggggttgactccttagttgaattcagtcag 22548234  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||| ||||||||||||||||||||| | ||||||    
T  22548233 ttcatccttgagacatcttaacgttacaccaaggcatcaaacctt 22548189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 40702430 - 40702286
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||||| |||  | ||||||| ||||||| |||||||| |||| | || ||  |||||| ||||| |||||||| ||||||||||||||||| |||     
T  40702430 tgaatgatattctcccttcgtcgaacgttggacgtttatactgaacgtgttccactctccttctgtctctggggttgactccttggttgaattcagtcag 40702331  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||    
T  40702330 ttcatccttgagaccttttaacgtcacaccaaggcaccgaacctt 40702286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 40415327 - 40415186
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| ||| | || |||||||||||||||||   |     
T  40415327 tgaatgataccctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggtgctgactccttggttgaattcagcgag 40415228  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    ||||| ||| |||||||||||||||||| |||||||||||||    
T  40415227 ttcatcctttagacctcttaacgttacatcaaggcaccgaac 40415186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 233
Target Start/End: Original strand, 43638821 - 43638953
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||| ||||||||  ||||||||||||||||| ||||||||||||| |||| || |||||||  | || ||||||||  ||||||||||||||||||||     
T  43638821 tgaaggatactctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctccttgcg-ctctggggttgagtccttggttgaattcattcag 43638919  T
Q  200 ttcattcttgagacctcttaacgttacaccaagg 233  Q
    || || |||||||||||||||||||||| |||||    
T  43638920 ttgatccttgagacctcttaacgttacatcaagg 43638953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 2416985 - 2416841
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||| |||||  |||||| ||||||||||||  | || || ||||||| ||| | |||||||| || |||||||||||||| |||     
T  2416985 tgaatgaaactctccccttgtcgaatgttggacgtttataccgaaggtgttccaccctccttgtgtttctggggttgacttcttggttgaattcagtcag 2416886  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || || |||||||||||||||||||||||||||||||||||||||    
T  2416885 ttgatccttgagacctcttaacgttacaccaaggcaccgaacctt 2416841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 31171958 - 31172104
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    ||||||||||| |||  | ||||||| ||||||| ||||||||||||| |||| || ||||||| |||||  ||||||| |||||| ||||||||||||     
T  31171958 actgaatgatattctcccatcgtcgaacgttggacgtttataccgaacgtattccaccctccttgtgtctccggggttgactccttagttgaattcatta 31172057  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | || || |||||||||| |||| || ||||||||| ||||||||||    
T  31172058 agttgatccttgagaccttttaatgtgacaccaaggtaccgaacctt 31172104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 244
Target Start/End: Original strand, 42169105 - 42169248
Alignment:
Q  101 gaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatt 200  Q
    |||||||||| |  ||||||||||||||||| |||||||||||||   || || ||||||  |||||  ||||||| ||||||||||||||||| |   |    
T  42169105 gaatgatactttcccctcgtcgagcgttggacgtttataccgaacgcgttccaccctcctcgtgtctccggggttgactccttggttgaattcagttggt 42169204  T
Q  201 tcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||| |||||||||||||||||||||| ||||||| | ||||||    
T  42169205 tcatccttgagacctcttaacgttacatcaaggcatcaaacctt 42169248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 40414680 - 40414540
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||| ||  |||||||||| ||| || ||||||||||||| | || || | ||||| ||||| |||| ||| ||| |||||||||||||   |     
T  40414680 tgaatgataccctcccctcgtcgagtgttagacgtttataccgaacgtgttccaccttccttgtgtctctggg-ttgactctttggttgaattcagcgac 40414582  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaac 241  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
T  40414581 ttcatcctttagacctcttaacgttacaccaaggcaccgaac 40414540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 2329 - 2185
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||| |||||||||| ||||||||||||| | || || ||||||| |||||  ||||||| ||||||||||||||||| ||||    
T  2329 tgaatgatactctcccctcgttgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagtcat 2230  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||    
T  2229 ttcatccttgagacctcttaacgttacaccaaggcatcgaacctt 2185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 34803043 - 34803185
Alignment:
Q  102 aatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcattt 201  Q
    |||||||||||  ||||||||||||||||| ||||||||||||| | || || ||||||| ||||| |||| ||| ||||||||||||||||| ||| ||    
T  34803043 aatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctgggattgactccttggttgaattcagtcagtt 34803142  T
Q  202 cattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||| ||| |||||||||||||||||||||||||||||||||||    
T  34803143 catccttaagacctcttaacgttacaccaaggcaccgaacctt 34803185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 22305860 - 22305716
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| ||||||||| ||| | || || | ||||| ||||| |||||||| ||||||||||||||||| |||     
T  22305860 tgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactccttggttgaattcagtcag 22305761  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    || ||  ||||||||||||||||||||||||||||||||||||||    
T  22305760 tttatctttgagacctcttaacgttacaccaaggcaccgaacctt 22305716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 27640246 - 27640100
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  ||||||||||||||||| ||||||||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| |     
T  27640246 actgaatgatactctcccctcgtcgagcgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtg 27640147  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | || || |||||||||||||||||||||||||||||||||||||||    
T  27640146 agtttatccttgagacctcttaacgttacaccaaggcaccgaacctt 27640100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 6205550 - 6205404
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||  | || || | ||||| ||||| |||||||| ||||||||||||||||| ||    
T  6205550 actgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtc 6205451  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  6205450 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 6205404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 12396840 - 12396696
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||| ||| || ||||||||||||| |  | || ||||||||||||| |||||||| ||||||||||||||||| |||     
T  12396840 tgaatgatactctcccctcgtcgagtgttagacgtttataccgaacgtgctccaccctccttatgtctctggggttgactccttggttgaattcagtcag 12396741  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||  |||||||| |||||||||| ||||||||||| ||||||    
T  12396740 ttcatcattgagaccgcttaacgttataccaaggcaccaaacctt 12396696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 13402597 - 13402453
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  |||||||||||||||||  ||||||| |||| | || || ||||||| ||||| |||||||| ||| ||||||||||||| |||     
T  13402597 tgaatgaaactctcccctcgtcgagcgttggacatttatacagaacgtgttccaccctccttgtgtctctggggttgactctttggttgaattcagtcag 13402498  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||    
T  13402497 ttcatccttgagacctcttaacgttacaccaaggtacctaacctt 13402453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 29108204 - 29108060
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| |||||||||  |  | || || ||||||| ||||| |||||||| |||||||||| |||||| |||     
T  29108204 tgaatgaaactctcccctcgtcgagcgttggacgtttataccacaggtgttccaccctccttgtgtctctggggttgactccttggttaaattcagtcag 29108105  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||    
T  29108104 ttcatccttgagacctcttagcgttacaccaaggcaccgaacctt 29108060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 32027773 - 32027917
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||  |||||| ||||||||||||| | ||  | ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  32027773 tgaatgatactctcccctcgtcgaatgttggacgtttataccgaacgtgttcaaccctccttgtgtctctggggttgactccttggttgaattcagtcag 32027872  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||||||||||  ||| |||||||||||    
T  32027873 ttcatccttgagacctcttaacgttacaaaaagtcaccgaacctt 32027917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 32037832 - 32037976
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  |||||||||  |||||| ||||||||||||| | ||  | ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  32037832 tgaatgatactctcccctcgtcgaatgttggacgtttataccgaacgtgttcaaccctccttgtgtctctggggttgactccttggttgaattcagtcag 32037931  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||||||||||  ||| |||||||||||    
T  32037932 ttcatccttgagacctcttaacgttacaaaaagtcaccgaacctt 32037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 100 - 251
Target Start/End: Complemental strand, 14115101 - 14114954
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||| |||||||| |||| | || || ||||||| |||||  | ||||| |||||||||||||||||| ||     
T  14115101 tgaatgatactctcccctcgtcgagcgttggacgtttatactgaacgttttgcaccctccttgtgtctccgaggttgactccttggttgaattcatccag 14115002  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctttaacttc 251  Q
    ||||| |||||||||||||||||    |||||||||||||||||| ||||||    
T  14115001 ttcatccttgagacctcttaacg----accaaggcaccgaaccttcaacttc 14114954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 3765921 - 3766010
Alignment:
Q  155 cctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||| ||||| |||||||| ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  3765921 cctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 3766010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 29066617 - 29066489
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| ||||||||||||  | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  29066617 tgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 29066518  T
Q  200 ttcattcttgagacctcttaacgttacac 228  Q
    ||||| |||||||||||||| ||||||||    
T  29066517 ttcatccttgagacctcttagcgttacac 29066489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 29075630 - 29075502
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    ||||||| |||||  ||||||||||||||||| ||||||||||||  | || || ||||||| ||||| |||||||| ||||||||||||||||| |||     
T  29075630 tgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcag 29075531  T
Q  200 ttcattcttgagacctcttaacgttacac 228  Q
    ||||| |||||||||||||| ||||||||    
T  29075530 ttcatccttgagacctcttagcgttacac 29075502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 115 - 244
Target Start/End: Complemental strand, 801215 - 801086
Alignment:
Q  115 cctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacc 214  Q
    ||||||||||| ||||| ||||||||| ||| |||| || ||||||| ||||| |||||| | || || ||||||||||| ||| || || |||||||||    
T  801215 cctcgtcgagctttggacgtttataccaaacgtattccaccctccttgtgtctctggggtcgacttctcggttgaattcactcagttgatccttgagacc 801116  T
Q  215 tcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||| ||||||||||||||||    
T  801115 tcttaacgttacatcaaggcaccgaacctt 801086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 11692517 - 11692371
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  ||| |||||| |||||| ||||||||| ||  | || || | ||||| ||||| | |||||| ||||||||||||||| | ||    
T  11692517 actgaatgatactctccccttgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctcgggttgactccttggttgaatttagtc 11692418  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | |  || |||||||||||||||||||||||||||||||||||||||    
T  11692417 agtgtatccttgagacctcttaacgttacaccaaggcaccgaacctt 11692371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 29110602 - 29110473
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcc-tccttatgtctatggggttggctccttggttgaattcattca 198  Q
    ||||||| |||||  ||||||||||||||||| ||||||||||||  | || || || ||||| ||||| |||||||| ||||||||||||||||| |||    
T  29110602 tgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccacccatccttgtgtctctggggttgactccttggttgaattcagtca 29110503  T
Q  199 tttcattcttgagacctcttaacgttacac 228  Q
     ||||| |||||||||||||| ||||||||    
T  29110502 gttcatccttgagacctcttagcgttacac 29110473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 35060168 - 35060257
Alignment:
Q  155 cctccttatgtctatggggttggctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    |||||||  |||| |||||||  ||| ||||||||||||||||| || || |||||||||||||||||||||| |||| |||||||||||    
T  35060168 cctccttgcgtctctggggttaactcgttggttgaattcattcagttgatccttgagacctcttaacgttacatcaagacaccgaacctt 35060257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 35058880 - 35058930
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatt 150  Q
    |||||||||||||  ||||||||||||||||| ||||||| ||||| ||||    
T  35058880 tgaatgatactctcccctcgtcgagcgttggacgtttataacgaacgtatt 35058930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 1852 - 1708
Alignment:
Q  100 tgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattcat 199  Q
    |||||||||||||  ||||||||||||||||||||||||||||||  | || || ||||||| ||||| | |||||| || ||||| |||||||| |||     
T  1852 tgaatgatactctcccctcgtcgagcgttggatgtttataccgaaattgttccaccctccttgtgtctctagggttgacttcttggctgaattcagtcag 1753  T
Q  200 ttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||    
T  1752 ttcatccttgagacctcttaatgttacaccaaggcatcgaacctt 1708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 24969 - 24823
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||| ||||||  |||| |||||||||| | || |||||||||| |||| || ||||||| |||||  ||||||| |||| |||||||||| |  |    
T  24969 actgaatgctactctcccctcctcgagcgttgtacgtctataccgaacgtattccaccctccttgtgtctccggggttgactccctggttgaatttagcc 24870  T
Q  198 atttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    | ||||| |||||||||||||||||||||||||||||||| ||||||    
T  24869 agttcatccttgagacctcttaacgttacaccaaggcaccaaacctt 24823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 233
Target Start/End: Complemental strand, 64039 - 63905
Alignment:
Q  98 actgaatgatactctttcctcgtcgagcgttggatgtttataccgaacatatttcatcctccttatgtctatggggttggctccttggttgaattcattc 197  Q
    |||||||||||||||  ||| |||||||||||||  |||||||||||| |  | || ||||||| ||||| |||||||| |||||| |||||||||||||    
T  64039 actgaatgatactctc-ccttgtcgagcgttggacatttataccgaacgtgctccaccctccttgtgtctctggggttgactcctttgttgaattcattc 63941  T
Q  198 atttcattcttgagacctcttaacgttacaccaagg 233  Q
    | ||||| |||||| ||||||||| |||||||||||    
T  63940 agttcatccttgaggcctcttaaccttacaccaagg 63905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 18117 - 18183
Alignment:
Q  178 ctccttggttgaattcattcatttcattcttgagacctcttaacgttacaccaaggcaccgaacctt 244  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  18117 ctccttggttgaattcagtcagttcatccttgagacctcttaacgttacaccaaggcaccgaacctt 18183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University