View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9656_low_94 (Length: 225)
Name: NF9656_low_94
Description: NF9656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9656_low_94 |
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Alignment Details
Target: chr4 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 6990190 - 6990382
Alignment:
| Q |
17 |
cagataaacaatcatatagtttcttctagaaa--tcctgataaagaaaagcaaatgaatgaaactcaccgaggatcagtgtccaaagcaatatgaagagc |
114 |
Q |
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| T |
6990190 |
cagataaacaatcatatagtttcttctagaaaaatcctgataaagaaaagcaaatgaatgaaactcaccgaggatcagtgtccaaagcaatatgaagagc |
6990289 |
T |
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| Q |
115 |
ttgattaacagcagaataaagattcaatgatttaacaccattctcagcagcagcatccttctgaacaatggaagttgacaaacccctccttga |
207 |
Q |
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| T |
6990290 |
ttgattaacagcagaataaaggttcaatgatttaacaccattctcagcagcagcatccttctgaacaatggaagttgacaaacccctccttga |
6990382 |
T |
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