View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9660_low_18 (Length: 281)

Name: NF9660_low_18
Description: NF9660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9660_low_18
NF9660_low_18
[»] scaffold0451 (2 HSPs)
scaffold0451 (117-281)||(10167-10331)
scaffold0451 (10-117)||(10363-10470)
[»] scaffold0024 (2 HSPs)
scaffold0024 (117-281)||(41196-41362)
scaffold0024 (15-117)||(41062-41164)
[»] chr4 (36 HSPs)
chr4 (117-281)||(5691613-5691779)
chr4 (117-280)||(10236447-10236611)
chr4 (123-278)||(17277708-17277865)
chr4 (117-194)||(5685496-5685573)
chr4 (148-281)||(9849781-9849916)
chr4 (123-280)||(9053870-9054027)
chr4 (148-281)||(14573337-14573472)
chr4 (125-278)||(18447517-18447670)
chr4 (119-281)||(20828213-20828376)
chr4 (24-114)||(10236322-10236412)
chr4 (117-195)||(19094104-19094182)
chr4 (156-281)||(19883586-19883713)
chr4 (117-269)||(25024964-25025117)
chr4 (148-280)||(17108606-17108740)
chr4 (213-281)||(7583747-7583815)
chr4 (146-281)||(15166354-15166491)
chr4 (199-281)||(17434375-17434457)
chr4 (148-281)||(11252203-11252337)
chr4 (148-281)||(17335429-17335564)
chr4 (59-117)||(17277614-17277672)
chr4 (15-81)||(20828445-20828511)
chr4 (126-279)||(16669797-16669951)
chr4 (122-281)||(12836144-12836300)
chr4 (156-237)||(23083597-23083679)
chr4 (125-179)||(1832231-1832284)
chr4 (42-116)||(5691506-5691580)
chr4 (158-277)||(19919216-19919336)
chr4 (117-191)||(26114367-26114440)
chr4 (156-197)||(11782376-11782417)
chr4 (43-116)||(16669993-16670066)
chr4 (148-197)||(19547212-19547260)
chr4 (122-175)||(22527809-22527861)
chr4 (213-281)||(10432133-10432201)
chr4 (213-281)||(18750779-18750847)
chr4 (213-281)||(22171703-22171771)
chr4 (57-117)||(26114472-26114532)
[»] chr7 (61 HSPs)
chr7 (42-281)||(23897013-23897263)
chr7 (117-277)||(3736196-3736355)
chr7 (117-281)||(6018215-6018381)
chr7 (117-281)||(1589095-1589262)
chr7 (117-281)||(9767642-9767808)
chr7 (117-281)||(10418415-10418580)
chr7 (155-281)||(23127968-23128096)
chr7 (148-281)||(21502742-21502877)
chr7 (117-280)||(144834-144998)
chr7 (122-279)||(9288772-9288931)
chr7 (123-281)||(10585261-10585421)
chr7 (123-279)||(9298565-9298723)
chr7 (122-281)||(5221042-5221202)
chr7 (148-280)||(26249150-26249284)
chr7 (9-114)||(1588955-1589060)
chr7 (117-178)||(3189516-3189577)
chr7 (123-281)||(4988080-4988240)
chr7 (123-281)||(4992178-4992338)
chr7 (122-249)||(5046942-5047067)
chr7 (17-117)||(15171034-15171134)
chr7 (150-281)||(8317515-8317648)
chr7 (122-281)||(15611113-15611272)
chr7 (146-281)||(20597486-20597623)
chr7 (125-281)||(2506883-2507041)
chr7 (123-281)||(10332268-10332427)
chr7 (24-117)||(21428529-21428622)
chr7 (116-192)||(1586050-1586125)
chr7 (15-107)||(3189619-3189711)
chr7 (10-117)||(3736057-3736164)
chr7 (213-280)||(13287785-13287852)
chr7 (125-195)||(1254858-1254926)
chr7 (122-232)||(5485488-5485599)
chr7 (148-267)||(6046415-6046536)
chr7 (123-237)||(7399201-7399317)
chr7 (148-279)||(11804587-11804719)
chr7 (148-281)||(8052502-8052638)
chr7 (148-281)||(18986818-18986953)
chr7 (148-281)||(19001446-19001581)
chr7 (146-280)||(1810791-1810926)
chr7 (213-281)||(8977544-8977612)
chr7 (120-281)||(15170838-15170999)
chr7 (148-281)||(20577392-20577527)
chr7 (15-113)||(10418280-10418378)
chr7 (117-194)||(19154694-19154771)
chr7 (117-194)||(20754093-20754170)
chr7 (197-275)||(21707418-21707496)
chr7 (148-246)||(2927762-2927862)
chr7 (117-162)||(8309931-8309976)
chr7 (148-281)||(9078956-9079091)
chr7 (156-281)||(25692685-25692812)
chr7 (148-246)||(24751309-24751406)
chr7 (215-281)||(1586148-1586214)
chr7 (59-113)||(10991240-10991294)
chr7 (158-281)||(11578713-11578837)
chr7 (10-91)||(144695-144775)
chr7 (43-112)||(5485377-5485446)
chr7 (127-237)||(8317198-8317309)
chr7 (148-197)||(13252817-13252866)
chr7 (59-99)||(5472020-5472060)
chr7 (42-90)||(18201786-18201834)
chr7 (127-195)||(20175962-20176028)
[»] chr1 (53 HSPs)
chr1 (117-281)||(16363480-16363646)
chr1 (117-281)||(24282859-24283025)
chr1 (120-281)||(15571762-15571925)
chr1 (117-279)||(9783055-9783219)
chr1 (117-280)||(25959534-25959697)
chr1 (116-279)||(33192208-33192373)
chr1 (117-281)||(21848483-21848649)
chr1 (117-281)||(15526870-15527035)
chr1 (117-281)||(35133742-35133907)
chr1 (117-279)||(44796975-44797138)
chr1 (125-281)||(14235358-14235515)
chr1 (148-281)||(22426589-22426724)
chr1 (117-195)||(7881652-7881730)
chr1 (117-281)||(23034994-23035158)
chr1 (149-281)||(28009635-28009769)
chr1 (149-281)||(22621681-22621817)
chr1 (117-247)||(22626262-22626393)
chr1 (171-281)||(22665697-22665809)
chr1 (148-281)||(18527570-18527705)
chr1 (15-116)||(16363346-16363447)
chr1 (122-276)||(17444931-17445084)
chr1 (117-194)||(18099938-18100015)
chr1 (147-280)||(16114687-16114822)
chr1 (148-233)||(16786215-16786302)
chr1 (148-281)||(18734659-18734794)
chr1 (148-281)||(26022283-26022418)
chr1 (149-249)||(15811551-15811653)
chr1 (149-281)||(25402509-25402643)
chr1 (149-280)||(12011259-12011391)
chr1 (158-281)||(16180616-16180740)
chr1 (55-117)||(24282765-24282827)
chr1 (213-279)||(24901164-24901230)
chr1 (148-281)||(15542382-15542517)
chr1 (149-247)||(26101749-26101849)
chr1 (123-280)||(27116298-27116456)
chr1 (146-267)||(21450653-21450776)
chr1 (22-114)||(33192082-33192174)
chr1 (17-117)||(44796843-44796943)
chr1 (26-117)||(9783251-9783342)
chr1 (15-106)||(18100058-18100149)
chr1 (149-281)||(18832104-18832238)
chr1 (43-114)||(23035193-23035264)
chr1 (117-281)||(26647431-26647595)
chr1 (23-117)||(15571960-15572054)
chr1 (43-117)||(15811716-15811790)
chr1 (35-117)||(16114544-16114626)
chr1 (228-281)||(18098322-18098375)
chr1 (52-117)||(35133645-35133710)
chr1 (213-281)||(15630997-15631065)
chr1 (148-195)||(22507536-22507583)
chr1 (213-267)||(26611419-26611473)
chr1 (213-281)||(16915270-16915338)
chr1 (37-109)||(25959736-25959808)
[»] chr5 (38 HSPs)
chr5 (117-280)||(34488714-34488879)
chr5 (118-278)||(22845872-22846034)
chr5 (117-281)||(17469632-17469797)
chr5 (117-277)||(24263828-24263990)
chr5 (121-279)||(24162087-24162246)
chr5 (148-280)||(19003840-19003974)
chr5 (118-281)||(18832081-18832245)
chr5 (117-195)||(18939378-18939455)
chr5 (122-281)||(18227475-18227633)
chr5 (123-281)||(26348306-26348465)
chr5 (118-281)||(24261924-24262090)
chr5 (149-280)||(25920721-25920853)
chr5 (148-281)||(26122270-26122405)
chr5 (126-280)||(31600150-31600305)
chr5 (15-117)||(17469829-17469930)
chr5 (117-182)||(24265453-24265518)
chr5 (15-116)||(24265551-24265652)
chr5 (117-182)||(24342084-24342149)
chr5 (15-116)||(24342182-24342283)
chr5 (147-281)||(24513260-24513396)
chr5 (117-195)||(15520832-15520910)
chr5 (148-279)||(20860227-20860360)
chr5 (148-237)||(24320640-24320731)
chr5 (148-281)||(29987844-29987979)
chr5 (27-98)||(24849778-24849849)
chr5 (214-281)||(26069205-26069272)
chr5 (15-117)||(18831946-18832048)
chr5 (31-117)||(19761851-19761937)
chr5 (122-280)||(26117300-26117459)
chr5 (216-281)||(23387621-23387686)
chr5 (27-96)||(26122144-26122213)
chr5 (122-179)||(28254754-28254810)
chr5 (213-281)||(19006922-19006990)
chr5 (146-250)||(24849672-24849777)
chr5 (148-195)||(26253357-26253403)
chr5 (122-237)||(19761699-19761814)
chr5 (213-279)||(22797496-22797562)
chr5 (34-88)||(34488599-34488653)
[»] chr8 (47 HSPs)
chr8 (119-281)||(7984976-7985140)
chr8 (122-281)||(24380427-24380587)
chr8 (123-281)||(4007225-4007385)
chr8 (121-279)||(2638581-2638741)
chr8 (123-281)||(19784854-19785014)
chr8 (116-277)||(30117736-30117898)
chr8 (121-269)||(24381412-24381561)
chr8 (122-281)||(14076986-14077145)
chr8 (118-197)||(22501693-22501771)
chr8 (123-281)||(19791256-19791416)
chr8 (24-117)||(24380624-24380717)
chr8 (148-281)||(30832827-30832962)
chr8 (117-281)||(14271699-14271864)
chr8 (117-237)||(24091673-24091795)
chr8 (147-281)||(20400221-20400357)
chr8 (17-117)||(30117929-30118027)
chr8 (156-277)||(18007432-18007555)
chr8 (148-281)||(26139676-26139811)
chr8 (123-280)||(37527101-37527259)
chr8 (151-197)||(12343050-12343096)
chr8 (122-269)||(24518673-24518820)
chr8 (118-281)||(25180795-25180959)
chr8 (123-281)||(6886533-6886691)
chr8 (125-281)||(17835410-17835566)
chr8 (124-276)||(17980658-17980811)
chr8 (127-281)||(24851018-24851173)
chr8 (20-117)||(7984844-7984941)
chr8 (156-281)||(19265718-19265845)
chr8 (148-281)||(24583245-24583380)
chr8 (216-281)||(13313345-13313410)
chr8 (148-281)||(25481579-25481715)
chr8 (148-281)||(15176506-15176640)
chr8 (213-277)||(24908859-24908923)
chr8 (213-277)||(24911080-24911144)
chr8 (149-261)||(18570418-18570532)
chr8 (148-281)||(24109108-24109243)
chr8 (27-113)||(24381601-24381687)
chr8 (149-247)||(21230814-21230914)
chr8 (52-116)||(14271602-14271666)
chr8 (148-281)||(24388446-24388580)
chr8 (213-280)||(24090953-24091020)
chr8 (122-189)||(35861630-35861695)
chr8 (158-277)||(5856678-5856798)
chr8 (43-117)||(22501586-22501660)
chr8 (144-185)||(6286177-6286218)
chr8 (123-184)||(28858700-28858760)
chr8 (122-199)||(30487709-30487784)
[»] chr2 (50 HSPs)
chr2 (117-281)||(18545129-18545295)
chr2 (150-281)||(18553179-18553312)
chr2 (140-281)||(32086928-32087071)
chr2 (118-281)||(23010117-23010282)
chr2 (123-278)||(29834728-29834885)
chr2 (117-281)||(17891588-17891754)
chr2 (134-281)||(29850892-29851039)
chr2 (128-281)||(11464392-11464546)
chr2 (10-109)||(25883620-25883719)
chr2 (148-281)||(25532124-25532259)
chr2 (122-277)||(27420935-27421090)
chr2 (148-267)||(27907610-27907731)
chr2 (123-281)||(29717432-29717588)
chr2 (139-249)||(25883461-25883572)
chr2 (148-281)||(17350866-17351001)
chr2 (148-281)||(25537444-25537579)
chr2 (122-280)||(26651712-26651869)
chr2 (125-267)||(32141479-32141622)
chr2 (125-281)||(18970847-18971003)
chr2 (59-117)||(11464586-11464644)
chr2 (17-83)||(18553023-18553089)
chr2 (122-281)||(22627248-22627407)
chr2 (123-195)||(34579935-34580007)
chr2 (123-195)||(34585684-34585756)
chr2 (148-281)||(18758189-18758324)
chr2 (27-114)||(45572641-45572727)
chr2 (27-114)||(45576308-45576394)
chr2 (27-114)||(45579975-45580061)
chr2 (27-114)||(45583642-45583728)
chr2 (27-114)||(45587309-45587395)
chr2 (27-114)||(45590976-45591062)
chr2 (27-114)||(45594643-45594729)
chr2 (27-114)||(45598310-45598396)
chr2 (27-114)||(45601977-45602063)
chr2 (27-114)||(45605644-45605730)
chr2 (27-114)||(45609311-45609397)
chr2 (27-114)||(45612978-45613064)
chr2 (27-114)||(45616645-45616731)
chr2 (121-195)||(19198639-19198712)
chr2 (27-116)||(36191339-36191428)
chr2 (27-115)||(27420808-27420896)
chr2 (131-194)||(8501674-8501735)
chr2 (16-91)||(23010338-23010413)
chr2 (15-106)||(32086751-32086842)
chr2 (123-281)||(19139507-19139665)
chr2 (213-281)||(38796134-38796205)
chr2 (213-281)||(17199481-17199549)
chr2 (27-91)||(22627122-22627186)
chr2 (213-281)||(28918143-28918211)
chr2 (149-197)||(29144523-29144571)
[»] chr6 (50 HSPs)
chr6 (117-281)||(9897941-9898107)
chr6 (117-281)||(22569713-22569877)
chr6 (117-281)||(23644391-23644557)
chr6 (148-281)||(22564623-22564758)
chr6 (117-280)||(19246134-19246298)
chr6 (117-281)||(15600488-15600653)
chr6 (122-279)||(9339054-9339211)
chr6 (117-281)||(20080595-20080759)
chr6 (157-280)||(2588193-2588318)
chr6 (123-281)||(9507344-9507503)
chr6 (23-117)||(9898139-9898233)
chr6 (123-281)||(21079795-21079953)
chr6 (122-281)||(8038124-8038285)
chr6 (117-249)||(21687235-21687368)
chr6 (117-281)||(24389221-24389386)
chr6 (129-220)||(27961084-27961175)
chr6 (148-281)||(19594050-19594186)
chr6 (123-281)||(21060478-21060636)
chr6 (148-281)||(13216379-13216514)
chr6 (149-281)||(14076285-14076419)
chr6 (146-281)||(24469684-24469821)
chr6 (146-281)||(9519618-9519755)
chr6 (119-237)||(3358003-3358121)
chr6 (59-116)||(10822005-10822062)
chr6 (197-277)||(31878931-31879012)
chr6 (197-281)||(8246552-8246636)
chr6 (20-88)||(22569585-22569653)
chr6 (204-279)||(6629050-6629125)
chr6 (148-280)||(8066540-8066674)
chr6 (148-195)||(9840914-9840961)
chr6 (146-246)||(14723571-14723672)
chr6 (148-267)||(20004268-20004389)
chr6 (117-281)||(24388050-24388214)
chr6 (31-117)||(8246366-8246452)
chr6 (146-281)||(22404328-22404464)
chr6 (125-179)||(32759835-32759888)
chr6 (10-91)||(21687426-21687506)
chr6 (127-179)||(10505039-10505090)
chr6 (213-281)||(21932429-21932497)
chr6 (148-281)||(23005320-23005455)
chr6 (148-281)||(23782911-23783046)
chr6 (148-195)||(1636522-1636569)
chr6 (146-197)||(24479910-24479961)
chr6 (75-117)||(6629245-6629287)
chr6 (117-170)||(8246484-8246537)
chr6 (148-197)||(20404171-20404219)
chr6 (63-115)||(3357914-3357966)
chr6 (213-281)||(14077992-14078060)
chr6 (213-281)||(14641587-14641655)
chr6 (127-179)||(30356131-30356182)
[»] chr3 (37 HSPs)
chr3 (117-281)||(17134949-17135115)
chr3 (117-277)||(20891723-20891882)
chr3 (161-281)||(18535671-18535793)
chr3 (118-281)||(3114783-3114947)
chr3 (119-281)||(13906657-13906820)
chr3 (117-268)||(18735357-18735509)
chr3 (117-247)||(19387958-19388089)
chr3 (156-281)||(22246893-22247020)
chr3 (117-281)||(22470476-22470644)
chr3 (122-249)||(20886732-20886859)
chr3 (117-281)||(5509927-5510092)
chr3 (15-116)||(22470677-22470778)
chr3 (135-280)||(31283978-31284125)
chr3 (148-281)||(8448690-8448825)
chr3 (156-281)||(16223387-16223514)
chr3 (148-281)||(27073840-27073975)
chr3 (156-281)||(8765570-8765697)
chr3 (148-281)||(14977694-14977829)
chr3 (154-278)||(19533676-19533802)
chr3 (125-280)||(28326209-28326364)
chr3 (156-278)||(19573652-19573776)
chr3 (148-281)||(8145136-8145271)
chr3 (213-281)||(8770519-8770587)
chr3 (17-113)||(18735545-18735641)
chr3 (213-281)||(27412733-27412801)
chr3 (10-117)||(8448521-8448627)
chr3 (27-117)||(20886605-20886695)
chr3 (52-117)||(3114980-3115045)
chr3 (146-281)||(18457185-18457321)
chr3 (157-194)||(52936537-52936574)
chr3 (149-281)||(19912468-19912603)
chr3 (213-281)||(20431427-20431495)
chr3 (29-113)||(22246736-22246819)
chr3 (124-195)||(23637477-23637547)
chr3 (156-281)||(19170215-19170341)
chr3 (147-195)||(19909191-19909239)
chr3 (119-179)||(23054754-23054813)
[»] scaffold0386 (5 HSPs)
scaffold0386 (117-281)||(9184-9349)
scaffold0386 (117-277)||(13552-13714)
scaffold0386 (161-281)||(4946-5066)
scaffold0386 (26-117)||(5106-5197)
scaffold0386 (24-117)||(9382-9475)
[»] scaffold0072 (1 HSPs)
scaffold0072 (148-277)||(38179-38310)
[»] scaffold0005 (1 HSPs)
scaffold0005 (148-281)||(243904-244039)
[»] scaffold0043 (2 HSPs)
scaffold0043 (117-281)||(88510-88675)
scaffold0043 (17-113)||(88711-88807)
[»] scaffold0019 (1 HSPs)
scaffold0019 (148-281)||(182585-182720)
[»] scaffold0360 (1 HSPs)
scaffold0360 (122-277)||(16545-16700)
[»] scaffold0062 (1 HSPs)
scaffold0062 (123-195)||(41699-41770)
[»] scaffold1017 (1 HSPs)
scaffold1017 (122-277)||(462-618)
[»] scaffold0086 (1 HSPs)
scaffold0086 (130-281)||(11964-12115)
[»] scaffold0115 (2 HSPs)
scaffold0115 (15-88)||(36352-36425)
scaffold0115 (167-279)||(36207-36321)
[»] scaffold0016 (1 HSPs)
scaffold0016 (216-281)||(4782-4847)
[»] scaffold0015 (2 HSPs)
scaffold0015 (117-197)||(201992-202071)
scaffold0015 (55-116)||(202104-202165)
[»] scaffold0002 (1 HSPs)
scaffold0002 (148-281)||(95512-95647)
[»] scaffold0032 (1 HSPs)
scaffold0032 (150-246)||(92937-93035)
[»] scaffold0094 (1 HSPs)
scaffold0094 (122-175)||(12094-12146)
[»] scaffold0441 (1 HSPs)
scaffold0441 (123-194)||(2128-2199)
[»] scaffold0014 (1 HSPs)
scaffold0014 (213-281)||(192077-192145)


Alignment Details
Target: scaffold0451 (Bit Score: 145; Significance: 2e-76; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 10331 - 10167
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgtttcaggaagaacggaat 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  10331 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgctgtttcaggaagaatagaat 10232  T
Q  217 tacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  10231 tacaaactcaaatatagaaaacaatacaaatgttatgaaatcatagacaattgatctaatactcc 10167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 10470 - 10363
Alignment:
Q  10 ggtggtgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtctttt 109  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10470 ggtggtgaaatgcctgttttctttgccttttatggtgttttcttcaatgtaagatgttttggaacttgggaatataattcctccctttgtgaagtctttt 10371  T
Q  110 gaggcctc 117  Q
    ||||||||    
T  10370 gaggcctc 10363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 41196 - 41362
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacgga 214  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||  |||||| |||| ||  ||    
T  41196 cacataaatcttcagatgtcttactttgcatgatttgcatgatttcttcgtgaattacatcaagaacaccctaaaattgtaatgtttctggaataataga 41295  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| ||| |||||||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  41296 attacagacttaaatatagaaaacattacaaatgttctgaaatcataggcaattgatctaatactcc 41362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 41062 - 41164
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||||||||||||||| | || || ||||||||  ||||||||||||||| ||| |||||  ||| | ||||||| | ||||| ||||||| ||||||    
T  41062 tgaaatgcctgttttcttcgtctgttgaggtgttttcttcaatgtaagatgtcttgaaactttagaacaaaattcctccttttgtaaagtcttatgaggc 41161  T
Q  115 ctc 117  Q
    |||    
T  41162 ctc 41164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 5691613 - 5691779
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||   ||| || |||||||  ||    
T  5691613 cacataaatcttcggatgtcttgctttgcctggtttgtttgatttcttcgtgaattacatcaagaacaccctaaaattgctatgtctcgggaagaataga 5691712  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||| | |||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  5691713 attatagactcaaatatagaaaacaatacaaatgttctgaaatcatagacaattgatctaatactcc 5691779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 280
Target Start/End: Original strand, 10236447 - 10236611
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    |||||||||||||| ||||||| | ||| ||||||||||||||||||||||||||||| |||| |||||||||||||||   | ||||||||||||  ||    
T  10236447 cacataaatcttcaaatgtcttgcattgtctgatttgcttgatttcttcgtgaattacttcaacaacaccctaaaattgctatttttcaggaagaataga 10236546  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    ||||||||||| |||||| || | | |||||||||   |||||||||||||||||||| |||||||    
T  10236547 attacaaactc-aatataaaatacattacaaatgtaccgaaatcataggcaattgatcaaatactc 10236611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 123 - 278
Target Start/End: Original strand, 17277708 - 17277865
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca 220  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||  |||| |||||||| |||||||||||   |||||  |||||||  ||||| ||    
T  17277708 aatcttcagaggtcttgttttgcctgatttgcttgatttcttcgtgttttacttcaagaaccccctaaaattgctatgttttgggaagaatagaattgca 17277807  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatac 278  Q
     || |||||||| |||| | |||| |||| ||||||||||||||||||||||||||||    
T  17277808 tacacaaatataaaaaacattacagatgtcatgaaatcataggcaattgatctaatac 17277865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 5685496 - 5685573
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt 194  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  5685496 cacataaatcttcggatgtcttgctttgcctgatttgcttgatttctttgtgaattacttcaagaacaccctaaaatt 5685573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 9849916 - 9849781
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||||| || ||||||||||||||| |  ||||| ||||||||  ||||||| |||||||||||| |||   |||||    
T  9849916 gatttgcatgatttcttcgtgaattacataaa-aacaccctaaaattgctatgtttcgggaagaacaaaattacatactcaaatataggaaactttacaa 9849818  T
Q  246 atgttat-gaaatcataggcaattgatctaatactcc 281  Q
    || || | |||||||||||||||||||||||||||||    
T  9849817 attttcttgaaatcataggcaattgatctaatactcc 9849781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 123 - 280
Target Start/End: Original strand, 9053870 - 9054027
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattaca 220  Q
    |||||||| ||||||| |||||| |||||||| ||||||||||||| |||||||||| || |||||||||||| |  |||||  ||||||  | |||| |    
T  9053870 aatcttcaaatgtcttactttgc-tgatttgcatgatttcttcgtgcattacatcaa-aataccctaaaattgctatgtttcgagaagaattgtattata 9053967  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
     |||||||||||||||| | |||||||||  ||||||||||  |||||||||||||||||    
T  9053968 gactcaaatatagaaaatattacaaatgtcctgaaatcataaccaattgatctaatactc 9054027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 14573337 - 14573472
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||| |  ||||| |||||||  |||||||| | |||||||||||||| | |||||    
T  14573337 gatttgcatgatttctttgtgaattacatcaaaaacacactaaaattgctatgtttcgggaagaatagaattacatattcaaatatagaaaacattacaa 14573436  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    || | ||||||| |||| |||||| |||||||||||    
T  14573437 atatcatgaaataatagacaattgctctaatactcc 14573472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 125 - 278
Target Start/End: Complemental strand, 18447670 - 18447517
Alignment:
Q  125 tcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaa 222  Q
    |||||||||||||| |||| || ||||||| |||||| |||||||||||||| || |||||||||||||||||  |||||  ||||||  ||||||||||    
T  18447670 tcttcagatgtcttgcttttcc-gatttgcatgatttgttcgtgaattacattaa-aacaccctaaaattgttatgtttcgagaagaatagaattacaaa 18447573  T
Q  223 ctcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatac 278  Q
    ||||||||||||||| | ||||||| |   ||||||||| ||||||  ||||||||    
T  18447572 ctcaaatatagaaaaaattacaaatatcccgaaatcataagcaatttctctaatac 18447517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 281
Target Start/End: Complemental strand, 20828376 - 20828213
Alignment:
Q  119 cataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaat 216  Q
    ||||||||||| |||||||| ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||   |||||| |||| |     ||    
T  20828376 cataaatcttcggatgtcttgctttgcc-gatttgcatgatttcttcgtgaattacatcaagaacgccctaaaattgctatgtttcgggaaaactctcat 20828278  T
Q  217 tacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||| ||||||||| |||||  | |||||||||    |||||||||||||||| | |||||||||    
T  20828277 tacagactcaaatacagaaaccattacaaatgtcccaaaatcataggcaattgttgtaatactcc 20828213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 10236322 - 10236412
Alignment:
Q  24 tgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    ||||||||||||||||| ||||||||  ||||||||||||||| |||||||||| ||| | ||||||||||||||| ||| ||| ||||||    
T  10236322 tgttttctttgccttttgaggtgttttcttcaatgtaagatgtcttggaacttgagaacaaaattccttcctttgtaaagacttctgaggc 10236412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 195
Target Start/End: Original strand, 19094104 - 19094182
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    ||||||||||||| |||||||  |||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||    
T  19094104 cacataaatcttcggatgtctggctttgcctgatttgcttgattttttcatgaattatattaagaacaccctaaaattg 19094182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 281
Target Start/End: Complemental strand, 19883713 - 19883586
Alignment:
Q  156 tgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatg 253  Q
    |||||||||||||||||||||||| ||||||||| ||||  |  ||||| |||||||   ||||| | |||||||||||||||| | |||||||||   |    
T  19883713 tgatttcttcgtgaattacatcaaaaacaccctataatttctatgtttcgggaagaatataattatagactcaaatatagaaaacattacaaatgtcccg 19883614  T
Q  254 aaatcataggcaattgatctaatactcc 281  Q
    ||||||||| |||||| |||||||||||    
T  19883613 aaatcatagacaattgttctaatactcc 19883586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 269
Target Start/End: Original strand, 25024964 - 25025117
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacgga 214  Q
    ||||||||||||| ||||||  | |||  | ||||||| ||||||||||||||||||||| || ||||||||||||||    |||||| | |||||| |     
T  25024964 cacataaatcttcggatgtcaatgttttgccgatttgcatgatttcttcgtgaattacat-aaaaacaccctaaaattactatgtttcggaaagaacagg 25025062  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattg 269  Q
    |||||| |||||||||||||||| | |||||||||    ||||||||||||||||    
T  25025063 attacatactcaaatatagaaaacattacaaatgtcccaaaatcataggcaattg 25025117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 280
Target Start/End: Original strand, 17108606 - 17108740
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||| || |||||||| |  ||||| |||| |   |||||||| ||||||||||| |||| | |||||    
T  17108606 gatttgcatgatttcttcgtgaattacttcaaaaaccccataaaattgctatgtttcgggaaaactagaattacagactcaaatataaaaaacattacaa 17108705  T
Q  246 atgttatgaaatcataggcaattgatctaatactc 280  Q
    | ||  |||||||||||||||||  ||||||||||    
T  17108706 aagtcctgaaatcataggcaatttttctaatactc 17108740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 7583747 - 7583815
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| |||||||||||||||| | |||||| ||  |||||||||||||||||| |||||||||||    
T  7583747 gaattacagactcaaatatagaaaacattacaaaagtcctgaaatcataggcaattgttctaatactcc 7583815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 281
Target Start/End: Original strand, 15166354 - 15166491
Alignment:
Q  146 ctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatac 243  Q
    ||||||||| |||||| | |||||||||| |||| ||| ||||||||||  |  ||||| |||| |   ||||||||||||||||||||||||| | |||    
T  15166354 ctgatttgcatgatttttccgtgaattacttcaaaaaccccctaaaattcctatgtttcgggaaaattagaattacaaactcaaatatagaaaacattac 15166453  T
Q  244 aaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||| ||   ||||||| ||||||| | |||||||||||    
T  15166454 aaaagtcccgaaatcacaggcaatcgttctaatactcc 15166491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 17434375 - 17434457
Alignment:
Q  199 tttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||| |||||||  |||||||| || ||||||||||||| | |||||||||   ||||||||| |||||||||||||||||||    
T  17434375 tttcgggaagaatagaattacagacccaaatatagaaaacattacaaatgtcccgaaatcataagcaattgatctaatactcc 17434457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 11252337 - 11252203
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacg-gaattacaaactcaaatatagaaaagaataca 244  Q
    ||||||| ||||||||||||||||||| |||| ||| ||||||||||| |  ||||| |||| |||  |||| ||| |||||||||||||||| | ||||    
T  11252337 gatttgcatgatttcttcgtgaattacttcaa-aaccccctaaaattgctatgtttc-ggaaaaactagaatcacagactcaaatatagaaaatattaca 11252240  T
Q  245 aatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || ||   ||||||||||||||| | |||||||||||    
T  11252239 aaagtcccgaaatcataggcaatcgttctaatactcc 11252203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 17335564 - 17335429
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||| ||||||||||||  |||||  |||| |   || ||||| |||||| ||||||||| | |||||    
T  17335564 gatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgttatgtttatggaaaactagagttacagactcaattatagaaaaaattacaa 17335465  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||    |||||||||||||| | |||||||||||    
T  17335464 aagtctcaaaatcataggcaatcgttctaatactcc 17335429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 17277614 - 17277672
Alignment:
Q  59 taagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||||| |||||||||||||| | ||||||| ||||||| ||||||| |||||||||    
T  17277614 taagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttatgaggcctc 17277672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 20828511 - 20828445
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaa 81  Q
    |||||||| ||||||||| |||  ||  |||||||  ||||||||||||||||||||||||||||||    
T  20828511 tgaaatgcatgttttcttcgcccattttggtgttttcttcaatgtaagatgttttggaacttgggaa 20828445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 279
Target Start/End: Complemental strand, 16669951 - 16669797
Alignment:
Q  126 cttcagatgtctttctttgcctgatttgcttgatttcttcgtgaatt-acatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaa 222  Q
    ||||| ||||||| ||||||| ||| ||| |||||| |||||||||| | | ||| |||| ||||||||||  ||||||  |||||||   ||||||| |    
T  16669951 cttcatatgtcttgctttgcc-gatatgcatgattttttcgtgaatttaaaacaa-aacatcctaaaattgctttgttttgggaagaatataattacata 16669854  T
Q  223 ctcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    ||||||||||||||| | ||||||| |   ||||||||| ||||||| |||||||||    
T  16669853 ctcaaatatagaaaatattacaaatttctcgaaatcataagcaattgttctaatact 16669797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 12836300 - 12836144
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgt--ttcaggaagaacggaattac 219  Q
    ||||||||| ||||||| ||||||| ||| ||| |||||||||  ||||||| | ||| |||||||| |||||||| |  ||| |||||||  |||||||    
T  12836300 aaatcttcaaatgtcttgctttgcc-gatatgcatgatttctttatgaattagaacaa-aacacccttaaattgttatgcttcgggaagaatagaattac 12836203  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||||||| |||||||| |    |||||| | ||||||||| | ||||| |||||||||||    
T  12836202 agactcaaaaatagaaaacat---aaatgtcacgaaatcatatgtaattgttctaatactcc 12836144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 23083597 - 23083679
Alignment:
Q  156 tgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaa 237  Q
    |||||||||||||||||||| ||| ||| ||||||||||| |  ||||  |||||||  || ||||||||||||||||||||||    
T  23083597 tgatttcttcgtgaattacaacaa-aactccctaaaattgatatgtttggggaagaatagagttacaaactcaaatatagaaaa 23083679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 1832284 - 1832231
Alignment:
Q  125 tcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaa 179  Q
    ||||||||||| || ||||||| ||||||| |||||| |||||||||||||||||    
T  1832284 tcttcagatgtattgctttgcc-gatttgcatgattttttcgtgaattacatcaa 1832231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 5691506 - 5691580
Alignment:
Q  42 aggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcct 116  Q
    ||||||||  ||||||||||||||| ||||||||| |||| | |||| |  ||| ||| ||||||||||||||||    
T  5691506 aggtgttttcttcaatgtaagatgtattggaactttggaacaaaatttccccctctgtaaagtcttttgaggcct 5691580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 277
Target Start/End: Complemental strand, 19919336 - 19919216
Alignment:
Q  158 atttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaa 255  Q
    ||||| |||||  |||| |||||||| |||||||| ||||  |||||  ||| ||  |||||||| |||||||||||||||| | ||||||| |   |||    
T  19919336 atttcatcgtggtttacttcaagaaccccctaaaagtgttatgtttcgagaataatagaattacagactcaaatatagaaaacattacaaat-tcccgaa 19919238  T
Q  256 atcataggcaattgatctaata 277  Q
    |||||||| |||||||||||||    
T  19919237 atcataggaaattgatctaata 19919216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 26114440 - 26114367
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaa 191  Q
    ||||||||||||| ||||| ||  |||||| ||||||| | |||||||||| ||||||||||| |||| ||||||    
T  26114440 cacataaatcttcggatgttttgttttgcc-gatttgcataatttcttcgttaattacatcaaaaacatcctaaa 26114367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 11782376 - 11782417
Alignment:
Q  156 tgatttcttcgtgaattacatcaagaacaccctaaaattgtt 197  Q
    ||||||||||||||||||| |||| ||| |||||||||||||    
T  11782376 tgatttcttcgtgaattacttcaaaaaccccctaaaattgtt 11782417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 16670066 - 16669993
Alignment:
Q  43 ggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcct 116  Q
    |||||||  ||| |||||||||||  ||||||||||||| | ||||||| ||||||| | ||||| ||||||||    
T  16670066 ggtgtttgcttctatgtaagatgtcatggaacttgggaacaaaattcctccctttgtaacgtcttctgaggcct 16669993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 19547260 - 19547212
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt 197  Q
    ||||||| |||||||||| ||||||||||||| ||||||||| |||||||    
T  19547260 gatttgcatgatttcttcttgaattacatcaa-aacaccctagaattgtt 19547212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 22527809 - 22527861
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattaca 175  Q
    ||||||||||||||||| ||||||| ||||||| |||||| ||| |||||||||    
T  22527809 aaatcttcagatgtcttgctttgcc-gatttgcatgattttttcatgaattaca 22527861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 10432133 - 10432201
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| |||||||||||||||| | || ||| |||  |||||||||| |||| | |||||||||||    
T  10432133 gaattacacactcaaatatagaaaatattataaaagttccgaaatcatagacaatagttctaatactcc 10432201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 18750779 - 18750847
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| ||||||||||| |||| | |||||| ||    |||||||||||||||| |||||||||||    
T  18750779 gaattacatactcaaatataaaaaacattacaaaagtcccaaaatcataggcaattgctctaatactcc 18750847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 22171703 - 22171771
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| |||||||||||||||| | ||||||  |  ||||||||||||||||   |||||||||||    
T  22171703 gaattacatactcaaatatagaaaacattacaaaaatcctgaaatcataggcaatcattctaatactcc 22171771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 26114532 - 26114472
Alignment:
Q  57 tgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    ||||| |||| |||||||||||||| | ||||| | | ||||| |||||||||||||||||    
T  26114532 tgtaatatgtcttggaacttgggaacaaaattcatccatttgtaaagtcttttgaggcctc 26114472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 281
Target Start/End: Original strand, 23897013 - 23897263
Alignment:
Q  42 aggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc---------acataaatcttcaga 132  Q
    ||||||||  ||||||||||||| |||||||||||||||| | ||||||| ||||| | |||||||||||||||||         |||||||||||| ||    
T  23897013 aggtgttttcttcaatgtaagatattttggaacttgggaacagaattcctccctttataaagtcttttgaggcctcttgaagtctacataaatcttcgga 23897112  T
Q  133 tgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattacaaactcaaata 230  Q
    ||||||||||||||| ||||| ||||||||||  | |||||| ||||||| ||||||||| |||  |||||| | |||||  |||||||| ||| |||||    
T  23897113 tgtctttctttgccttatttgtttgatttctttctaaattacttcaagaataccctaaaactgttatgtttcggaaagaatagaattacagactaaaata 23897212  T
Q  231 tagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || |||| | |||||||||  |||||||||||||||||||| |||||||||    
T  23897213 taaaaaatattacaaatgtcctgaaatcataggcaattgatataatactcc 23897263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 117 - 277
Target Start/End: Original strand, 3736196 - 3736355
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgtttcaggaagaacggaat 216  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| ||||||  ||| ||  ||||    
T  3736196 cacataaatcttcggatgtcttgctttgcctgatttgattgatttctttgtgaattacatcaataacaccctaaaattgctgtttcgagaaaaatagaat 3736295  T
Q  217 tacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaata 277  Q
    |||| |||||||||||||||| | |||||||||   |||||||||||||||||||||||||    
T  3736296 tacatactcaaatatagaaaa-attacaaatgtctcgaaatcataggcaattgatctaata 3736355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 6018215 - 6018381
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacgga 214  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||  |||||  |||| ||   |    
T  6018215 cacataaatcttcaaatgtcttactttgcctgatttgcttgatttcttcgtgaattacatcaaaaataccctaaaattgttatgttttgggaaaaatata 6018314  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||||  ||||||||||||||| |||||||||||  | ||||||||||||||| ||||||||||||    
T  6018315 attacatgctcaaatatagaaaacaatacaaatgtcctaaaatcataggcaattaatctaatactcc 6018381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 1589095 - 1589262
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcc-tgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgg 213  Q
    ||||||||||||  |||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||   | |||| |||||||  |    
T  1589095 cacataaatctttggatgtcttacttttccctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgctatatttcgggaagaatag 1589194  T
Q  214 aattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||||| ||||||||||||| || |||||||||||  |||||||||| |||||| ||||||||||||    
T  1589195 aattacatactcaaatatagacaacaatacaaatgtcttgaaatcatatgcaattaatctaatactcc 1589262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 9767642 - 9767808
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    |||||||||| || |||||||| |||| ||| | |||||||||||||||||||||||||| |||||||||||||| |||   | ||||  ||||||  ||    
T  9767642 cacataaatcctcggatgtcttgcttttcctaagttgcttgatttcttcgtgaattacattaagaacaccctaaagttgctatatttcgagaagaataga 9767741  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| |||||||||||||||| |||| ||||||   |||||||||||||||||||||||||||||    
T  9767742 attacagactcaaatatagaaaacaatataaatgtctcgaaatcataggcaattgatctaatactcc 9767808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 10418415 - 10418580
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacgga 214  Q
    ||||||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||||| || |||| |||||||||  |  ||||| ||||||||  |    
T  10418415 cacataaatcttcggatgtcttgctttgcc-gatttgcatgatttcttcgtgaattacataaaaaacatcctaaaatttctatgtttcgggaagaacata 10418513  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||| | |||||||||||||||| | ||||||||||  ||||||||||||||||| |||||||||||    
T  10418514 attatagactcaaatatagaaaacattacaaatgttccgaaatcataggcaattgctctaatactcc 10418580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 155 - 281
Target Start/End: Complemental strand, 23128096 - 23127968
Alignment:
Q  155 ttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttat 252  Q
    ||||||||||||||||||||||||||||||||||||||||| |  ||||| ||||||| ||||||||| |||| |||||||||||   ||||||||||      
T  23128096 ttgatttcttcgtgaattacatcaagaacaccctaaaattgctatgtttcgggaagaatggaattacagactcgaatatagaaaaccttacaaatgttcc 23127997  T
Q  253 gaaatcataggcaattgatctaatactcc 281  Q
     |||||||| |||||||||||||||||||    
T  23127996 aaaatcataagcaattgatctaatactcc 23127968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 21502742 - 21502877
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||||||||| ||||| |  ||||| |||||||  |||||||| |||||| | ||||||| | |||||    
T  21502742 gatttgcatgatttcttcgtgaattacctcaaaaacaccctagaattgctatgtttcgggaagaatagaattacagactcaagtctagaaaacattacaa 21502841  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||   ||||||||||||||||| |||||||||||    
T  21502842 atgtcccgaaatcataggcaattgttctaatactcc 21502877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 280
Target Start/End: Original strand, 144834 - 144998
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||| ||||||| ||||||||| |||  | ||||||| |||||| |||||||||||||| || |||| |||| |||||   |||||| ||||||||  |    
T  144834 cacatgaatcttcggatgtctttgttttgccgatttgcatgatttgttcgtgaattacataaaaaacatcctacaattgctatgtttcgggaagaacata 144933  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    |||||| |||||||||||||||| | || |||| |   ||||||||||||||||| ||||||||||    
T  144934 attacatactcaaatatagaaaacattataaat-tcccgaaatcataggcaattgctctaatactc 144998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 279
Target Start/End: Original strand, 9288772 - 9288931
Alignment:
Q  122 aaatcttcagatgt-ctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaatta 218  Q
    |||||||||||||| ||| ||||| | ||||||| ||||||||||| |||||||||||| || | |||||||||| |  |||||| ||||||  ||||||    
T  9288772 aaatcttcagatgttcttactttgac-gatttgcatgatttcttcgcgaattacatcaaaaaaatcctaaaattgctatgtttcaagaagaatagaatta 9288870  T
Q  219 caaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    || | |||||||||||||| | ||||| ||| |  ||||||||| |||||| |||||||||    
T  9288871 cataatcaaatatagaaaacattacaagtgtcacaaaatcatagacaattgttctaatact 9288931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 281
Target Start/End: Complemental strand, 10585421 - 10585261
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattaca 220  Q
    |||||||||| || ||  |||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||  |||||| | || ||  ||||||||    
T  10585421 aatcttcagaggttttgttttgcctgatttgcttgatttctttgtgaattacttcaagaaccccctaaaattgttatgtttcggaaaaaaaagaattaca 10585322  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     ||| | || ||||||| | ||||||| |   ||||||||||| |||||  ||||||||||    
T  10585321 tacttagatgtagaaaatattacaaatctcccgaaatcataggaaattgtcctaatactcc 10585261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 279
Target Start/End: Original strand, 9298565 - 9298723
Alignment:
Q  123 aatcttcagatgt-ctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattac 219  Q
    ||||||||||||| ||| ||||| | ||||||| ||||||||||| |||||||||||| || | |||||||||| |  |||||| ||||||  |||||||    
T  9298565 aatcttcagatgttcttactttgac-gatttgcatgatttcttcgcgaattacatcaaaaaaatcctaaaattgctatgtttcaagaagaatagaattac 9298663  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    | | |||||||||||||| | ||||| ||| |  ||||||||| |||||| |||||||||    
T  9298664 ataatcaaatatagaaaacattacaagtgtcacaaaatcatagacaattgttctaatact 9298723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 5221202 - 5221042
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaatt-acatcaagaacaccctaaaattgtt--gtttcaggaagaacggaatta 218  Q
    ||||||||||||||||| ||||||| ||| ||| ||||||||||||||||| ||| ||| |||| |||||||||| |  |||||  ||||||  ||||||    
T  5221202 aaatcttcagatgtcttgctttgcc-gatatgcatgatttcttcgtgaatttacaacaa-aacatcctaaaattgctatgtttcgagaagaatagaatta 5221105  T
Q  219 caaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     | |||||||||||||||| | |||||||||   ||||||||| ||||||| |||| ||||||    
T  5221104 tagactcaaatatagaaaacattacaaatgtaccgaaatcataagcaattgttctagtactcc 5221042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 280
Target Start/End: Complemental strand, 26249284 - 26249150
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||| ||||||||||| |  |||| ||||| |   ||||||||||||||||||||||||| | |||||    
T  26249284 gatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgttttaggaaaactagaattacaaactcaaatatagaaaacattacaa 26249185  T
Q  246 atgttatgaaatcataggcaattgatctaatactc 280  Q
    |  |  ||||||||||  |||||| ||||||||||    
T  26249184 aaatcctgaaatcataaacaattgttctaatactc 26249150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 1588955 - 1589060
Alignment:
Q  9 tggtggtgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttt 108  Q
    ||||| |||||| ||||||||||| || |||  ||||||||  ||||||||||||||| |||||||||||||| ||||||||| | | ||| |||||||     
T  1588955 tggtgctgaaattcctgttttcttcgcttttataggtgttttcttcaatgtaagatgtcttggaacttgggaacataattcctccttctgtaaagtcttc 1589054  T
Q  109 tgaggc 114  Q
    ||||||    
T  1589055 tgaggc 1589060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 3189577 - 3189516
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatca 178  Q
    ||||||||||||| |||||||| |||||||||| |||| |||||||||||||||||||||||    
T  3189577 cacataaatcttcggatgtcttgctttgcctgagttgcgtgatttcttcgtgaattacatca 3189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 281
Target Start/End: Original strand, 4988080 - 4988240
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca 220  Q
    ||||||||||  ||||  |||||||||||||||||||||||||   |||||| |||||||| | |||||||||   |||||| |||||||  ||||||||    
T  4988080 aatcttcagagatcttgttttgcctgatttgcttgatttcttcacaaattacttcaagaaccctctaaaattgctatgtttcgggaagaatagaattaca 4988179  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     | ||||||||  |||| | | |||||||    |||||||||||||||||| |||||||||    
T  4988180 tattcaaatatgaaaaacatttcaaatgtcggaaaatcataggcaattgatataatactcc 4988240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 281
Target Start/End: Original strand, 4992178 - 4992338
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca 220  Q
    ||||||||||  ||||  |||||||||||||||||||||||||   |||||| |||||||| | |||||||||   |||||| |||||||  ||||||||    
T  4992178 aatcttcagagatcttgttttgcctgatttgcttgatttcttcacaaattacttcaagaaccctctaaaattgctatgtttcgggaagaatagaattaca 4992277  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     | ||||||||  |||| | | |||||||    |||||||||||||||||| |||||||||    
T  4992278 tattcaaatatgaaaaacatttcaaatgtcggaaaatcataggcaattgatataatactcc 4992338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 5047067 - 5046942
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattac 219  Q
    |||| ||||||||||||  |||||| ||||||| |||||||||||||||||||||||| ||||| |||||||||   |||||| |||||||   ||||||    
T  5047067 aaattttcagatgtcttgatttgcc-gatttgcatgatttcttcgtgaattacatcaa-aacactctaaaattgctatgtttcgggaagaa---aattac 5046973  T
Q  220 a-aactcaaatatagaaaagaatacaaatgt 249  Q
    | ||||||||||||||||| | |||||||||    
T  5046972 ataactcaaatatagaaaacattacaaatgt 5046942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 15171134 - 15171034
Alignment:
Q  17 aaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcct 116  Q
    |||||| ||||||||| ||||||| ||||||||   || ||||||||||| ||||||||| |||| | ||||||| ||||||| ||||||| ||||||||    
T  15171134 aaatgcatgttttcttcgcctttttaggtgtttgcctctatgtaagatgtcttggaacttaggaacaaaattcctccctttgtaaagtcttctgaggcct 15171035  T
Q  117 c 117  Q
    |    
T  15171034 c 15171034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 281
Target Start/End: Complemental strand, 8317648 - 8317515
Alignment:
Q  150 tttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacg-gaattacaaactcaaatatagaaaagaatacaaa 246  Q
    ||||| ||||||||||||||||||| |||| |||||||| |||||| |  ||||| |||| |||  |||||||| |||||||||||||||| | ||||||    
T  8317648 tttgcatgatttcttcgtgaattacttcaaaaacaccctcaaattgctatgtttc-ggaaaaactagaattacagactcaaatatagaaaacattacaaa 8317550  T
Q  247 tgttatgaaatcataggcaattgatctaatactcc 281  Q
     ||   ||||||||||||||| | |||||||||||    
T  8317549 agtcccgaaatcataggcaatcgttctaatactcc 8317515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 15611272 - 15611113
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattac 219  Q
    |||| ||||||||||||||||||||  || ||| |||||||||||||||||||| ||| ||||| ||||| |||   |||||| |||||||  |||||||    
T  15611272 aaattttcagatgtctttctttgcc-aatatgcatgatttcttcgtgaattacaacaa-aacactctaaatttgctatgtttcgggaagaatagaattac 15611175  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || |||||||||| |||| | || || |||   ||||||||| | |||| ||||||||||||    
T  15611174 aagctcaaatataaaaaacattaaaactgtcccgaaatcataagaaatttatctaatactcc 15611113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 281
Target Start/End: Original strand, 20597486 - 20597623
Alignment:
Q  146 ctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatac 243  Q
    ||||||||| |||||||||||||| |||| |||| ||| |||||||||||   |||||| |||| |   |||||||| |||||||||||||||| |  ||    
T  20597486 ctgatttgcatgatttcttcgtgacttacttcaaaaaccccctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacataac 20597585  T
Q  244 aaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||| ||  |||||||||| | ||||| |||||||||||    
T  20597586 aaaagtcctgaaatcataagtaattgttctaatactcc 20597623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 2507041 - 2506883
Alignment:
Q  125 tcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacggaattaca-a 221  Q
    |||| ||||||||| |||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||    |||||  |||| ||  ||||||||      
T  2507041 tcttaagatgtcttgctttgc-tgatttgcatgatttcttcgtgaattagatcaa-aacaccctaaaatttctatgttttgggaataatagaattacatg 2506944  T
Q  222 actcaaatatagaaaagaatacaaatgt-tatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||||||||||| | ||||||||| |   |||||||| ||||||| |||||||||||    
T  2506943 actcaaatatagaaaacattacaaatgtctcgaaaatcataagcaattgttctaatactcc 2506883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 281
Target Start/End: Original strand, 10332268 - 10332427
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca 220  Q
    ||||||||||||||||  |||||| ||| ||| |||||||||| ||||||||||||| |||| |||| |||||   |||||| |||| ||  ||| ||||    
T  10332268 aatcttcagatgtcttgttttgcc-gatatgcatgatttcttcatgaattacatcaaaaacatcctagaattgatatgtttcgggaaaaatagaactaca 10332366  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
      ||| ||||||||||| | |||||||||    |||| ||| |||||||||||||||||||    
T  10332367 ggctcgaatatagaaaacattacaaatgtcccaaaatgataagcaattgatctaatactcc 10332427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 21428529 - 21428622
Alignment:
Q  24 tgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    ||||||||||| || || |||||| |  |||| |||||||||| |||||||||||||||| ||||||| | | ||| |||||||||||||||||    
T  21428529 tgttttctttgtctgtttaggtgtgttcttcagtgtaagatgtcttggaacttgggaatagaattcctccatctgtaaagtcttttgaggcctc 21428622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 1586050 - 1586125
Alignment:
Q  116 tcacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaa 192  Q
    |||| ||||||||| ||||||||  |||||| ||||||| ||||||||||||||||||| ||||||||||| |||||    
T  1586050 tcacgtaaatcttcggatgtcttgatttgcc-gatttgcatgatttcttcgtgaattacttcaagaacaccataaaa 1586125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 3189711 - 3189619
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtctt 107  Q
    ||||||| ||||||||||||| | || | ||||||  ||||||||||||||| |||||||||||||| ||||||| | ||| ||| |||||||    
T  3189711 tgaaatgtctgttttctttgcatgttgaagtgttttcttcaatgtaagatgtcttggaacttgggaacataattcatccctctgtaaagtctt 3189619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 3736057 - 3736164
Alignment:
Q  10 ggtggtgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtctttt 109  Q
    |||| ||||||| ||||||||||||||| || ||||||||  ||||||||||||||| |||||| ||| ||| | ||||||| ||| |||  |||||  |    
T  3736057 ggtgctgaaatgtctgttttctttgcctgttgaggtgttttcttcaatgtaagatgtcttggaaattgagaacagaattcctccctctgtatagtctcct 3736156  T
Q  110 gaggcctc 117  Q
    ||||||||    
T  3736157 gaggcctc 3736164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 13287852 - 13287785
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    ||||||||||||||||||||||||| | |||||| ||  |||||||||||||||| | ||||||||||    
T  13287852 gaattacaaactcaaatatagaaaatattacaaaagtcctgaaatcataggcaatcgttctaatactc 13287785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 195
Target Start/End: Complemental strand, 1254926 - 1254858
Alignment:
Q  125 tcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    |||||| ||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  1254926 tcttcaaatgtcttgctttgtc-gatttgcttgatttcttcgtgaattacatcaa-aacaccctataattg 1254858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 5485488 - 5485599
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaatt-acatcaagaacaccctaaaattgtt--gtttcaggaagaacggaatta 218  Q
    ||||||||||||||||| ||| ||| ||| ||| || |||||||||||||| ||| ||| |||| |||||||||| |  |||||||||||||| ||||||    
T  5485488 aaatcttcagatgtcttgcttcgcc-gatatgcatgttttcttcgtgaatttacaacaa-aacatcctaaaattgatatgtttcaggaagaacagaatta 5485585  T
Q  219 caaactcaaatata 232  Q
    || |||||||||||    
T  5485586 catactcaaatata 5485599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 6046415 - 6046536
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||  ||||||||||||  |||||| |||| |   |||||||| |||||||||||||||| | |||||    
T  6046415 gatttgcatgatttcttcgtgaattacttcaaaaaacccctaaaattgtcatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaa 6046514  T
Q  246 atgttatgaaatcataggcaat 267  Q
    | ||    ||||||||||||||    
T  6046515 aagtcccaaaatcataggcaat 6046536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 7399201 - 7399317
Alignment:
Q  123 aatcttcagatgtctttc-tttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacggaattac 219  Q
    ||||||| |||||||||| |||||| ||||||| ||||||| |||| ||||||||||| ||||||||||||||    |||||  |||||||   |||||     
T  7399201 aatcttctgatgtctttcctttgcc-gatttgcatgatttcgtcgttaattacatcaaaaacaccctaaaattactatgttttgggaagaatataattaa 7399299  T
Q  220 aaactcaaatatagaaaa 237  Q
    ||||||||||||||||||    
T  7399300 aaactcaaatatagaaaa 7399317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 279
Target Start/End: Original strand, 11804587 - 11804719
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||| | |||| ||| ||| ||||||| |  ||||| |||| |   |||||||| |||||||||||||||| | |||||    
T  11804587 gatttgcatgatttcttcgtgaatttcttcaaaaaccccc-aaaattgctatgtttcgggaaaactagaattacatactcaaatatagaaaacattacaa 11804685  T
Q  246 atgttatgaaatcataggcaattgatctaatact 279  Q
    | ||  |||||||||||||||| | |||||||||    
T  11804686 aagtcctgaaatcataggcaatcgttctaatact 11804719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 8052638 - 8052502
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccc-taaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaataca 244  Q
    ||||||| ||||||||||||||||||| |||| | | ||| |||||||| |  ||||| |||| |    |||||||||||||||||||||||| | ||||    
T  8052638 gatttgcatgatttcttcgtgaattacttcaaaacctcccctaaaattgctatgtttcgggaaaactaaaattacaaactcaaatatagaaaacattaca 8052539  T
Q  245 aatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || |||  |||||||||||||||   |||||||||||    
T  8052538 aaagttccgaaatcataggcaatcattctaatactcc 8052502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 18986953 - 18986818
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacacccta-aaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaataca 244  Q
    ||||||| ||||||||||||||||||| |||| ||| ||||| |||| | |  |||||| ||| |   ||||||||||||||||||||||||| | ||||    
T  18986953 gatttgcatgatttcttcgtgaattacttcaaaaac-ccctacaaatagctatgtttcaagaaaactagaattacaaactcaaatatagaaaatattaca 18986855  T
Q  245 aatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || ||  |||||||||||||| | | |||||||||||    
T  18986854 aaagtcctgaaatcataggcagtcgttctaatactcc 18986818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 19001581 - 19001446
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacacccta-aaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaataca 244  Q
    ||||||| ||||||||||||||||||| |||| ||| ||||| |||| | |  |||||| ||| |   ||||||||||||||||||||||||| | ||||    
T  19001581 gatttgcatgatttcttcgtgaattacttcaaaaac-ccctacaaatagctatgtttcaagaaaactagaattacaaactcaaatatagaaaatattaca 19001483  T
Q  245 aatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || ||  |||||||||||||| | | |||||||||||    
T  19001482 aaagtcctgaaatcataggcagtcgttctaatactcc 19001446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 280
Target Start/End: Original strand, 1810791 - 1810926
Alignment:
Q  146 ctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaa-ttgt-tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatac 243  Q
    ||||||||| ||||||||| |||||| || |||| | |||||||||| || | |||||| |||||||  |||||||| |||||||||||||||| |||||    
T  1810791 ctgatttgcatgatttctttgtgaatgacgtcaa-accaccctaaaaattatatgtttcgggaagaatagaattacatactcaaatatagaaaataatac 1810889  T
Q  244 aaatgttatgaaatcataggcaattgatctaatactc 280  Q
    |||| |    |||| ||| |||||| |||||||||||    
T  1810890 aaatatcccaaaataataagcaattaatctaatactc 1810926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 8977612 - 8977544
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| |||||||||||||||| | |||||| ||  |||||||||||||| ||| |||||||||||    
T  8977612 gaattacagactcaaatatagaaaacattacaaaagtcctgaaatcataggcagttgttctaatactcc 8977544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 281
Target Start/End: Complemental strand, 15170999 - 15170838
Alignment:
Q  120 ataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacggaatt 217  Q
    |||||||||| | |||||| ||||||| ||||| | |||||||||||||||||||||| | |||| |||||||||    | |||  ||||||||  ||||    
T  15170999 ataaatcttcggttgtcttgctttgcc-gatttacatgatttcttcgtgaattacatccaaaacatcctaaaattactatattttgggaagaacaaaatt 15170901  T
Q  218 acaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||  |||||||||||||| | |||||||||  |||||||| | |||||| || |||||||||    
T  15170900 a-aagatcaaatatagaaaacattacaaatgtcctgaaatcacatgcaatttatttaatactcc 15170838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 20577392 - 20577527
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| | | |||| |||||| |  ||||| |||| |   ||||||||  ||||||||||||||| | |||||    
T  20577392 gatttgcatgatttcttcgtgaattacttcaaaacccccctcaaattgctatgtttcgggaatactagaattacaggctcaaatatagaaaacattacaa 20577491  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||   ||||||||||||||| | |||||||||||    
T  20577492 aagtctcgaaatcataggcaatcgttctaatactcc 20577527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 10418280 - 10418378
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgagg 113  Q
    ||||||| || ||||||| | ||||| | ||||||  |||| |||||||||| |||||||||||||| |||||| || | ||||| ||||||| |||||    
T  10418280 tgaaatgtctattttcttcgtctttttaagtgtttgcttcagtgtaagatgtcttggaacttgggaacataatttctccttttgtaaagtcttctgagg 10418378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 19154694 - 19154771
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttctt-cgtgaattacatcaagaacaccctaaaatt 194  Q
    ||||||||||||  |||||||| |||||||  |||||| |||||| || ||||||||||||||||||||||||| ||||    
T  19154694 cacataaatctttggatgtcttactttgcca-atttgcatgatttttttcgtgaattacatcaagaacaccctataatt 19154771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 20754093 - 20754170
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttctt-cgtgaattacatcaagaacaccctaaaatt 194  Q
    ||||||||||||  |||||||| |||||||  |||||| |||||| || ||||||||||||||||||||||||| ||||    
T  20754093 cacataaatctttggatgtcttactttgcca-atttgcatgatttttttcgtgaattacatcaagaacaccctataatt 20754170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 275
Target Start/End: Complemental strand, 21707496 - 21707418
Alignment:
Q  197 tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaa 275  Q
    ||||||||||||||  |||||||| | |||||||||||||| | |||||||||   ||| ||||||||||||| |||||    
T  21707496 tgtttcaggaagaatagaattacagattcaaatatagaaaacattacaaatgtctcgaactcataggcaattgttctaa 21707418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 2927762 - 2927862
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| | | | |||||||||   ||||||||||| |   |||||| |||||||||||||||||| | |||||    
T  2927762 gatttgcgtgatttcttcgtgaattacttcaaaaccccactaaaattgctatgtttcaggaaaactagaattataaactcaaatatagaaaacattacaa 2927861  T
Q  246 a 246  Q
    |    
T  2927862 a 2927862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 8309976 - 8309931
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttc 162  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||    
T  8309976 cacataaatcttcggatgtcttgctttgcctgatttgattgatttc 8309931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 9079091 - 9078956
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| |||  | || ||||| |  ||||| |||| |    |||||||||||||||||||||||| | |||||    
T  9079091 gatttgcatgatttcttcgtgaattacttcaaaaacctcatataattgctatgtttcgggaaaactataattacaaactcaaatatagaaaacattacaa 9078992  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||  ||||||||||| |||| | || ||||||||    
T  9078991 aagtcctgaaatcatagacaatcgttccaatactcc 9078956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 25692685 - 25692812
Alignment:
Q  156 tgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatg 253  Q
    |||||||||| |||||||  |||| |||| ||||||||| ||  ||||| |||| |   |||||||| |||||||||||||||| | |||||| |||  |    
T  25692685 tgatttcttcttgaattatttcaaaaacatcctaaaattattatgtttcgggaaaactagaattacagactcaaatatagaaaatattacaaaagttccg 25692784  T
Q  254 aaatcataggcaattgatctaatactcc 281  Q
    | ||||||| |||| | |||||||||||    
T  25692785 atatcatagacaatcgttctaatactcc 25692812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 24751406 - 24751309
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgtttcaggaagaacggaattaca-aactcaaatatagaaaagaatacaaa 246  Q
    ||||||| || ||||||||||||||||||||| ||||||||| ||||| |||||  |||| ||  ||||||||  |||| ||||||||||||| ||||||    
T  24751406 gatttgcatggtttcttcgtgaattacatcaa-aacaccctagaattgatgtttttggaaaaatagaattacatgactc-aatatagaaaagattacaaa 24751309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 1586148 - 1586214
Alignment:
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| ||||||||| |||||| | |||||||||  ||||||||||| |||||| |||||| ||||    
T  1586148 attacatactcaaataaagaaaacattacaaatgtcctgaaatcatagacaattgctctaatgctcc 1586214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 10991294 - 10991240
Alignment:
Q  59 taagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgagg 113  Q
    ||||||||||||||||||||||| ||||||| | | ||||| | |||||||||||    
T  10991294 taagatgttttggaacttgggaacataattcatccttttgtaatgtcttttgagg 10991240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 11578837 - 11578713
Alignment:
Q  158 atttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaa 255  Q
    |||||||||||| |||| |||| | | |||||||||||||  ||||| |||| |   |||||| | ||||||||||| |||| | |||||| ||  ||||    
T  11578837 atttcttcgtgatttacttcaaaatc-ccctaaaattgttatgtttcgggaaaactagaattatagactcaaatataaaaaatattacaaaagtcctgaa 11578739  T
Q  256 atcataggcaattgatctaatactcc 281  Q
    |||||||| ||||| |||||||||||    
T  11578738 atcataggtaattgctctaatactcc 11578713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 144695 - 144775
Alignment:
Q  10 ggtggtgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattcct 91  Q
    |||| |||||||| ||||| ||||||||||| |||| |||  ||| ||||||  ||| |||||||||||||| |||||||||    
T  144695 ggtgttgaaatgcttgttt-ctttgcctttttaggtatttgcttctatgtaaattgtcttggaacttgggaacataattcct 144775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 5485377 - 5485446
Alignment:
Q  43 ggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgag 112  Q
    |||||||  ||| ||||||||||| |||||||||||||||| ||||| | ||| ||| | ||||||||||    
T  5485377 ggtgtttgcttccatgtaagatgtcttggaacttgggaataaaattcttccctctgtaacgtcttttgag 5485446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 8317309 - 8317198
Alignment:
Q  127 ttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaact 224  Q
    |||||||||||| || ||||| |||| ||||||| |  |||||||||||| ||||||||| ||||||||   |||||| |||||||  |||||||| |||    
T  8317309 ttcagatgtcttgctctgcctaattttcttgatt-cggcgtgaattacatgaagaacaccttaaaattgctatgtttctggaagaatagaattacagact 8317211  T
Q  225 caaatatagaaaa 237  Q
     || |||| ||||    
T  8317210 aaattatataaaa 8317198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 13252866 - 13252817
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt 197  Q
    ||||||| ||||||||||||||||||| |||| | | |||||||||||||    
T  13252866 gatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgtt 13252817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 5472060 - 5472020
Alignment:
Q  59 taagatgttttggaacttgggaatataattccttcctttgt 99  Q
    |||||||||||||||||| |||| ||||||||| |||||||    
T  5472060 taagatgttttggaactttggaacataattcctccctttgt 5472020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 18201834 - 18201786
Alignment:
Q  42 aggtgtttatttcaatgtaagatgttttggaacttgggaatataattcc 90  Q
    ||||||||  ||||||||||||||| |||||||||||||| | ||||||    
T  18201834 aggtgttttcttcaatgtaagatgtcttggaacttgggaacagaattcc 18201786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 20175962 - 20176028
Alignment:
Q  127 ttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    |||||||||||| ||||||| |||||||   |||||||| ||||||||||||| ||||||||| |||||    
T  20175962 ttcagatgtcttgctttgcc-gatttgcaaaatttcttcatgaattacatcaa-aacaccctagaattg 20176028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 16363480 - 16363646
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||  |||||||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||   |||||| |||||||  ||    
T  16363480 cacataaatctttggatgtcttgctttgcctgatttacttgatttattcgtgaattacatcaaaaacaccctaaaaatgacatgtttcgggaagaataga 16363579  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||| | || |||||| |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  16363580 attatagacacaaataaagaaaagaatacaaatgttccgaaatcataggcaattgatctaatactcc 16363646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 24282859 - 24283025
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   || ||| |||||||  ||    
T  24282859 cacataaatcttcggatgtcttgctttgcctggtttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgctatggttcgggaagaataga 24282958  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| || ||||||||||||| | || |||  |  |||||| ||||| |||||||||||||||||    
T  24282959 attacagacacaaatatagaaaacattaaaaaattcctgaaattataggaaattgatctaatactcc 24283025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 281
Target Start/End: Complemental strand, 15571925 - 15571762
Alignment:
Q  120 ataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaatt 217  Q
    |||||||||| ||||||||  |||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||||  |||||  |||||||  |||||    
T  15571925 ataaatcttcggatgtcttgttttgcctgattttcttgatttctttgtgaattacttcaagaactccctaaaattgttatgttttgggaagaatagaatt 15571826  T
Q  218 acaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||| ||| |||||||||||| | |||||| ||  | ||||||||| ||||||||||||||||||    
T  15571825 acatacttaaatatagaaaatattacaaacgtcctaaaatcatagacaattgatctaatactcc 15571762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 279
Target Start/End: Complemental strand, 9783219 - 9783055
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacgga 214  Q
    ||||||||||||| |||||||| |||| |||||||||||  ||||||| |||| |||||||||||||||| | |||||  |  |||||||||||||  ||    
T  9783219 cacataaatcttcggatgtcttgctttacctgatttgctctatttcttagtgatttacatcaagaacaccattaaatttctatgtttcaggaagaataga 9783120  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    |||||| |||||||||||||||| | |||| |||||  ||||| ||||||||||| |||||||||    
T  9783119 attacagactcaaatatagaaaatattacatatgttccgaaataataggcaattgctctaatact 9783055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 280
Target Start/End: Complemental strand, 25959697 - 25959534
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||   ||||||| |||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||   ||||||||||||||  ||    
T  25959697 cacataaatctttgaatgtcttgctttgcatgatttgcttgatttcttcgtgaattaaatcaagaacaccataaaattgctatgtttcaggaagaataga 25959598  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    |  | | |||||||||||||||| ||||||||| |   ||||||||||| | ||||||||||||||    
T  25959597 a--agagactcaaatatagaaaataatacaaatatctcgaaatcataggtagttgatctaatactc 25959534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 33192208 - 33192373
Alignment:
Q  116 tcacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgg 213  Q
    |||||||||||||  ||| |||| ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||   |||||  |||||||  |    
T  33192208 tcacataaatctttggatttcttgctttgcctgatttgcttgatttctttgtgaattacttcaaaaacaccctaaaattgctatgtttagggaagaatag 33192307  T
Q  214 aattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    ||||||| |||||||||||||||| | ||||||  |   |||||| ||| ||||| ||||||||||    
T  33192308 aattacagactcaaatatagaaaacattacaaacatctcgaaatcgtagacaattaatctaatact 33192373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 21848483 - 21848649
Alignment:
Q  117 cacataaatcttcagatgtcttt-ctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacgg 213  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||| |||||||||||||| ||||||||||||||    |||||||||||||||      
T  21848483 cacataaatcttcagatgtctttgctttgcc-gatttgcatgatttctttgtgaattacatcaaaaacaccctaaaatttctatgtttcaggaagaacat 21848581  T
Q  214 aattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||| | | ||  ||||||||||||   |||||||||   ||||||||| ||||||| |||||||||||    
T  21848582 aataatagacctaaatatagaaaacgttacaaatgtgtcgaaatcataagcaattgctctaatactcc 21848649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 15527035 - 15526870
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacgga 214  Q
    ||||||||||||| |||||||| |||||||  |||||| ||||||||| |||||||||| |||||||| |||||||||| |  |||||||||| |    |    
T  15527035 cacataaatcttcggatgtcttactttgcca-atttgcatgatttctttgtgaattacaacaagaacatcctaaaattgctatgtttcaggaaaactcta 15526937  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| ||| |||||||||||| | |||||||||   ||||||||||||||||  |||||||||||    
T  15526936 attacagactaaaatatagaaaacattacaaatgtctcgaaatcataggcaattactctaatactcc 15526870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 35133742 - 35133907
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    |||| |||||||  |||||||| |||||| |||||| | ||||||||||||||||||||||||||||||||||||||||   |||||||| || |         
T  35133742 cacaaaaatctttggatgtcttgctttgc-tgattttcatgatttcttcgtgaattacatcaagaacaccctaaaattgctatgtttcagaaaaattctg 35133840  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||||||||||||||||||||| | ||||||||||   ||||| |||||||||  | |||||||||    
T  35133841 attacaaactcaaatatagaaaacattacaaatgttccaaaatcgtaggcaattactttaatactcc 35133907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 279
Target Start/End: Original strand, 44796975 - 44797138
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacgga 214  Q
    ||||||||||||||||||||||  |||  | ||||||| ||| |||||||||||||||||||||||||||||||||||    |||||| |||| |         
T  44796975 cacataaatcttcagatgtcttggtttttc-gatttgcatgacttcttcgtgaattacatcaagaacaccctaaaattactatgtttcgggaaaactctg 44797073  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    |||||| ||||||||||| |||| | |||||||||  |||||||||||||||||  |||||||||    
T  44797074 attacagactcaaatataaaaaacattacaaatgtcttgaaatcataggcaattactctaatact 44797138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 14235515 - 14235358
Alignment:
Q  125 tcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca-a 221  Q
    ||||||||||||||  ||||||  |||||| |||||||||||||||||||||||| |||||||||||||||   |||||| |||| ||   |||||||      
T  14235515 tcttcagatgtcttgttttgcca-atttgcatgatttcttcgtgaattacatcaa-aacaccctaaaattgctatgtttcgggaataatataattacatg 14235418  T
Q  222 actcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||||||||||| | |||||||||    |||||||| ||||||| |||||||||||    
T  14235417 actcaaatatagaaaacattacaaatgtcccaaaatcataagcaattggtctaatactcc 14235358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 22426724 - 22426589
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||  |||| ||  ||||||||||| |  ||||||||||||   |||||||| |||||||||||||||| | |||||    
T  22426724 gatttgcatgatttcttcgtgaattatttcaaaaaacccctaaaattgctatgtttcaggaagactagaattacagactcaaatatagaaaacattacaa 22426625  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||   ||||||||||||||| | |||||||||||    
T  22426624 aagtcccgaaatcataggcaatcgttctaatactcc 22426589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 195
Target Start/End: Original strand, 7881652 - 7881730
Alignment:
Q  117 cacataaatcttcagatgtcttt-ctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    ||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||| |||| ||||||||||    
T  7881652 cacataaatcttcagatgtctttgctttgcca-atttgcatgatttcttcgtgaattacatcaaaaacatcctaaaattg 7881730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 23035158 - 23034994
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||  |||||||| |||||| |||||||| |||||||||||||| |||||||||||||||||||||||||   |||||| |||| |         
T  23035158 cacataaatctttggatgtcttgctttgc-tgatttgcatgatttcttcgtga-ttacatcaagaacaccctaaaattggtatgtttcgggaaaactctg 23035061  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| |||||||||||||||| | ||||||| |  | |||||||| |||| |  |||||||||||    
T  23035060 attacagactcaaatatagaaaacattacaaatatcctaaaatcatatgcaactactctaatactcc 23034994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 281
Target Start/End: Original strand, 28009635 - 28009769
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaa 246  Q
    |||||| |||||||||||||| ||||  ||| ||| ||||||||||| |  ||||| |||| |  ||||||||| |||||||||||||||||| ||||||    
T  28009635 atttgcatgatttcttcgtgatttactccaaaaaccccctaaaattgctatgtttcgggaaaactggaattacatactcaaatatagaaaagattacaaa 28009734  T
Q  247 tgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||   ||||| ||||||||||| |||||| ||||    
T  28009735 tgtctcgaaattataggcaattgctctaatgctcc 28009769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 281
Target Start/End: Original strand, 22621681 - 22621817
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacac--cctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaataca 244  Q
    |||||| |||||||||||||||||||||||| |||||  |||| ||||| |  ||||| ||||||| | ||||||  |||| |||| |||||| | ||||    
T  22621681 atttgcatgatttcttcgtgaattacatcaaaaacacatcctagaattggtatgtttcgggaagaatgtaattaccgactcgaataaagaaaacattaca 22621780  T
Q  245 aatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||| |  ||||||||||||||||||||||||| ||||    
T  22621781 aatttcctgaaatcataggcaattgatctaattctcc 22621817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 22626393 - 22626262
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||| |||  ||||||| ||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||   ||||||||||| |         
T  22626393 cacataaattttcgaatgtcttactttgcc-gatttgcatgatcttttcgtgaattacatcaagaacaccctaaaattgccatgtttcaggaaaactctg 22626295  T
Q  215 attacaaactcaaatatagaaaagaatacaaat 247  Q
    |||||| |||||||||||||||| | |||||||    
T  22626294 attacagactcaaatatagaaaacattacaaat 22626262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 22665697 - 22665809
Alignment:
Q  171 ttacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaatt 268  Q
    |||| |||||||| ||||||||||| |  |||||  ||||||  ||||||||||||||||||||||||| | |||||||||  |||||||||||||||||    
T  22665697 ttacttcaagaaccccctaaaattgctatgtttcgagaagaatagaattacaaactcaaatatagaaaacattacaaatgtcctgaaatcataggcaatt 22665796  T
Q  269 gatctaatactcc 281  Q
      |||| ||||||    
T  22665797 tctctagtactcc 22665809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 18527705 - 18527570
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||| |||||||||||   |||||| |||| |   |||||||| |||||||||||||||||| |||||    
T  18527705 gatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaagattacaa 18527606  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    |  |   |||||||||||||||   |||||||||||    
T  18527605 aactcccgaaatcataggcaatcattctaatactcc 18527570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 16363346 - 16363447
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||||||||||||| | ||||||||| ||||||  |||| |||||||||| |||||||||||||| | |||| || ||| ||| ||||||| | ||||    
T  16363346 tgaaatgcctgttttcctcgccttttaatgtgtttgcttcattgtaagatgtattggaacttgggaaaagaatttctccctctgtaaagtcttctaaggc 16363445  T
Q  115 ct 116  Q
    ||    
T  16363446 ct 16363447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 276
Target Start/End: Original strand, 17444931 - 17445084
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgtttc--aggaagaacggaattac 219  Q
    |||| ||||||| |||| ||||||| ||| ||| || ||||||||||||||||| ||| |||| |||||||||| | ||||  ||||||||  |||||||    
T  17444931 aaattttcagatttcttactttgcc-gatatgcatg-tttcttcgtgaattacaacaa-aacatcctaaaattgctatttctcaggaagaatagaattac 17445027  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaat 276  Q
    | ||||||||||| |||| ||||||||| |    |||||||| ||||||||||||||    
T  17445028 agactcaaatataaaaaacaatacaaatatcccaaaatcataagcaattgatctaat 17445084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 18100015 - 18099938
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt 194  Q
    ||||||||||||| |||||||| ||||  ||||||| || |||||||||||||||||||| |||||| |||| |||||    
T  18100015 cacataaatcttcggatgtcttgctttttctgattttctcgatttcttcgtgaattacatgaagaactccctgaaatt 18099938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 280
Target Start/End: Original strand, 16114687 - 16114822
Alignment:
Q  147 tgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaataca 244  Q
    |||| ||| |||||||||| |||||||||||||||||| ||||||||||   |||||  ||||||||  ||||||| | |||| ||||||||| | ||||    
T  16114687 tgatatgcatgatttcttcatgaattacatcaagaacatcctaaaattgctatgtttttggaagaacaaaattacatattcaattatagaaaacattaca 16114786  T
Q  245 aatgttatgaaatcataggcaattgatctaatactc 280  Q
    |||||    ||||||| || ||||| ||||||||||    
T  16114787 aatgtccctaaatcatgggaaattgctctaatactc 16114822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 16786302 - 16786215
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatag 233  Q
    ||||||| |||||||||||||||||| ||||| |||||| ||||||||   |||||| |||||||  |||||||| ||||||||||||    
T  16786302 gatttgcatgatttcttcgtgaattagatcaaaaacaccataaaattgctatgtttcgggaagaatagaattacatactcaaatatag 16786215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 18734794 - 18734659
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||| ||| |||||||   ||||||||||| |   |||||||| |||||||||| ||||| | |||||    
T  18734794 gatttgcatgatttcttcgtgaattacttcaaaaacccccaaaaattgctatgtttcaggaaaactagaattacatactcaaatattgaaaacattacaa 18734695  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||    |||||||||||||| | |||||||||||    
T  18734694 aagtctcaaaatcataggcaatcgttctaatactcc 18734659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 26022283 - 26022418
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| |||||||| |||||||||| |||| |||  | |||||||| |  ||||||||||||   |||||| | |||||||||||||||| | |||||    
T  26022283 gatttgcatgatttctccgtgaattacttcaaaaacctcttaaaattgctatgtttcaggaagactagaattaaagactcaaatatagaaaacattacaa 26022382  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||   ||||||||| ||||||| || ||||||||    
T  26022383 atgtcccgaaatcataagcaattgctccaatactcc 26022418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 15811653 - 15811551
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaa 246  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||   ||||||||||| |     | |||| |||||||||||||||| | ||||||    
T  15811653 atttgcatgatttcttcgtgaattacatcaagaaccccctaaaattgctatgtttcaggaaaactctgagtacagactcaaatatagaaaacattacaaa 15811554  T
Q  247 tgt 249  Q
    |||    
T  15811553 tgt 15811551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 281
Target Start/End: Complemental strand, 25402643 - 25402509
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaa 246  Q
    |||||||||||||||||||||||||| |||| | | |||||||||||   | ||||||||| |   |||||| | |||||||||||||||| | ||||||    
T  25402643 atttgcttgatttcttcgtgaattacttcaaaacccccctaaaattgctatatttcaggaaaactagaattagagactcaaatatagaaaacattacaaa 25402544  T
Q  247 tgttatgaaatcataggcaattgatctaatactcc 281  Q
     ||  ||||||||||  |||| | |||||||||||    
T  25402543 agtcctgaaatcataaacaatcgttctaatactcc 25402509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 280
Target Start/End: Complemental strand, 12011391 - 12011259
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaa 246  Q
    |||||| ||||||||||||||||||  |||| || ||||||||||||  ||||||  ||||||   || ||| | |||||||||| ||||| | | ||||    
T  12011391 atttgcatgatttcttcgtgaattatctcaa-aagaccctaaaattgctttgtttagggaagactagagttatagactcaaatattgaaaacattccaaa 12011293  T
Q  247 tgttatgaaatcataggcaattgatctaatactc 280  Q
    ||||  ||||||||||||||||| ||||||||||    
T  12011292 tgtttcgaaatcataggcaattgctctaatactc 12011259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 16180616 - 16180740
Alignment:
Q  158 atttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaa 255  Q
    ||||||||||||||||| |||| ||| ||||||||||||  ||||| ||||| |   |||||||| ||||||||| |||||| | |||||| ||   |||    
T  16180616 atttcttcgtgaattacttcaaaaaccccctaaaattgttatgttttaggaaaattagaattacagactcaaatacagaaaacattacaaaagtcccgaa 16180715  T
Q  256 atcataggcaattgatctaatactcc 281  Q
    ||||||||||| || |||||||||||    
T  16180716 atcataggcaa-tgttctaatactcc 16180740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 24282765 - 24282827
Alignment:
Q  55 aatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||||||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||||||||    
T  24282765 aatgtaagatgtattgtaacttgggaacataattcctccctttgtaaagtcttatgaggcctc 24282827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 279
Target Start/End: Original strand, 24901164 - 24901230
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    |||||||| |||||||||| ||||| |||||||||||  |||||| ||| |||||||||||||||||    
T  24901164 gaattacagactcaaatattgaaaacaatacaaatgtcctgaaatgataagcaattgatctaatact 24901230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 15542517 - 15542382
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacg-gaattacaaactcaaatatagaaaagaataca 244  Q
    ||||||| ||||||||||||||||||| |||| ||| || |||||||| |  ||||| |||| |||  |||||||| ||||| |||||||||| | ||||    
T  15542517 gatttgcgtgatttcttcgtgaattacttcaaaaaccccttaaaattgctatgtttc-ggaaaaactagaattacatactcagatatagaaaacattaca 15542419  T
Q  245 aatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || ||   ||||||||||||||| | |||||||||||    
T  15542418 aaagtcccgaaatcataggcaatcgttctaatactcc 15542382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 26101749 - 26101849
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaa 246  Q
    |||||| ||||||||||||||| |||||||| ||||||||| |||||   |||||| |||||||  |||||||| | || ||||||||||| | ||||||    
T  26101749 atttgcatgatttcttcgtgaactacatcaaaaacaccctataattgctatgtttcgggaagaatagaattacatattccaatatagaaaacattacaaa 26101848  T
Q  247 t 247  Q
    |    
T  26101849 t 26101849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 280
Target Start/End: Complemental strand, 27116456 - 27116298
Alignment:
Q  123 aatcttcagatgt-ctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattac 219  Q
    ||||||| ||||| ||| ||||||| ||||||| ||||||||| ||||||||||| || || |||||| ||||| |  ||||| |||||||  |||||||    
T  27116456 aatcttcggatgttcttactttgcc-gatttgcatgatttctttgtgaattacataaaaaa-accctagaattgctatgtttcgggaagaatagaattac 27116359  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    | ||| |||||||||||| | |||||||||    ||||||||| |||||  ||||||||||    
T  27116358 atactaaaatatagaaaacattacaaatgtcccaaaatcatagacaatttctctaatactc 27116298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 21450653 - 21450776
Alignment:
Q  146 ctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatac 243  Q
    ||||||||| ||||||||||||||||||| |||| | | |||||||||||   |||||| | || |   ||||||||||||||||||||||||| | |||    
T  21450653 ctgatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgtttcggtaaaattagaattacaaactcaaatatagaaaacattac 21450752  T
Q  244 aaatgttatgaaatcataggcaat 267  Q
    |||  |   |||||||||||||||    
T  21450753 aaagttcccgaaatcataggcaat 21450776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 33192082 - 33192174
Alignment:
Q  22 cctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||||||||  | | || ||||||||  | ||||||||||||| || ||||||||||| | ||||||| ||||||| ||||||||||||||    
T  33192082 cctgttttcttcacatgttgaggtgttttctacaatgtaagatgtcttagaacttgggaacagaattcctccctttgtaaagtcttttgaggc 33192174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 44796843 - 44796943
Alignment:
Q  17 aaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcct 116  Q
    |||||| ||||||||| |||  ||  |||||||  |||||| |||||||| |||||||||||||| ||||||||| ||| ||| | ||||| ||||||||    
T  44796843 aaatgcatgttttcttcgcccattttggtgttttcttcaatataagatgtcttggaacttgggaacataattcctccctctgtaacgtcttctgaggcct 44796942  T
Q  117 c 117  Q
    |    
T  44796943 c 44796943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 9783342 - 9783251
Alignment:
Q  26 ttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||||||||| || ||| ||||  ||||| |||| |||| |||||||||||||| | ||||||| ||| ||| ||||||| |||||||||    
T  9783342 ttttctttgcctattgaggcgttttcttcaaagtaaaatgtcttggaacttgggaacaaaattcctccctctgtaaagtcttatgaggcctc 9783251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 18100149 - 18100058
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtct 106  Q
    |||||||||||||||||| |||| || ||||||||  ||||| |||| |||| |||||||||||||  | ||||| | ||||||| ||||||    
T  18100149 tgaaatgcctgttttcttcgcctgttgaggtgttttcttcaaagtaaaatgtcttggaacttgggaggagaattcttccctttgtaaagtct 18100058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 281
Target Start/End: Original strand, 18832104 - 18832238
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaa 246  Q
    |||||| ||||||||||||||| ||| |||| ||| |||| |||||| |  ||||  |||| | | |||||||| |||||||||| ||||| | ||||||    
T  18832104 atttgcatgatttcttcgtgaagtacttcaaaaacccccttaaattgctatgttttgggaaaatcagaattacagactcaaatatggaaaacattacaaa 18832203  T
Q  247 tgttatgaaatcataggcaattgatctaatactcc 281  Q
     ||  |||||||||||| ||| | |||||||||||    
T  18832204 agtcctgaaatcataggtaatcgttctaatactcc 18832238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 23035264 - 23035193
Alignment:
Q  43 ggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||||  ||||||||||||||| |||||||||||||| ||||||||| | ||||| | ||||| ||||||    
T  23035264 ggtgttttcttcaatgtaagatgtcttggaacttgggaacataattcctccttttgtaacgtcttatgaggc 23035193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 26647595 - 26647431
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||| |||||||| ||||  |  |||||| ||||||||||||||||||||| | ||||||| ||||||||   || ||| |||| |         
T  26647595 cacataaatcttcggatgtcttgctttagca-atttgcatgatttcttcgtgaattacataatgaacaccttaaaattgctatgattcgggaaaactctg 26647497  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| |||||||||||||||| | ||||||||    |||||||||||| |||| |||||||||||    
T  26647496 attacagactcaaatatagaaaacattacaaatgcctcgaaatcataggc-attgctctaatactcc 26647431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 15572054 - 15571960
Alignment:
Q  23 ctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||||||| ||||  | ||||||||  ||||||||||||||| || ||||||||||| | ||||||| ||| ||| || |||||||| |||||    
T  15572054 ctgttttcttcgcctggtgaggtgttttcttcaatgtaagatgtcttcgaacttgggaacagaattcctccctgtgtaaactcttttgatgcctc 15571960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 15811790 - 15811716
Alignment:
Q  43 ggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||||  ||||||||||||||| |||||||||||||| ||||||||  ||| ||| | ||||| |||||||||    
T  15811790 ggtgtttccttcaatgtaagatgtcttggaacttgggaacataattccaccctctgtaacgtcttatgaggcctc 15811716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 16114544 - 16114626
Alignment:
Q  35 ccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||| | ||||||| ||||||||||||||| |||||||||||||| | || | || ||||||| ||||||| | |||||||    
T  16114544 cctttttaagtgtttacttcaatgtaagatgtcttggaacttgggaacaaaaatactccctttgtaaagtcttctaaggcctc 16114626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 18098375 - 18098322
Alignment:
Q  228 atatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||||| | |||||||||   |||||||||||||||||||||||||||||    
T  18098375 atatagaaaatattacaaatgtctcgaaatcataggcaattgatctaatactcc 18098322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 35133645 - 35133710
Alignment:
Q  52 ttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    ||||||||||||||| |||||||||||||| |||||||   ||||||| | ||||| |||||||||    
T  35133645 ttcaatgtaagatgtcttggaacttgggaacataattctaccctttgtaacgtcttctgaggcctc 35133710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 15631065 - 15630997
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| |||||||||||||||| | |||||| ||   ||||||||||||||| | |||||||||||    
T  15631065 gaattacatactcaaatatagaaaacattacaaaagtctcgaaatcataggcaatcgttctaatactcc 15630997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 22507583 - 22507536
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    ||||||| ||||||||||||||||||| |||| ||| |||||||||||    
T  22507583 gatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattg 22507536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 26611473 - 26611419
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaat 267  Q
    |||||||| |||||||||||||||| | |||||| ||  ||||||||||||||||    
T  26611473 gaattacagactcaaatatagaaaacattacaaaagtcctgaaatcataggcaat 26611419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 16915338 - 16915270
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||  |||||||||||||||| | |||||| |||   |||||||||||||| | |||||||||||    
T  16915338 gaattacttactcaaatatagaaaacattacaaaagttccaaaatcataggcaatcgttctaatactcc 16915270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 25959808 - 25959736
Alignment:
Q  37 ttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtctttt 109  Q
    |||| ||||||||  ||||||||||||||| ||| |||||| ||| | ||||||| ||||| | |||||||||    
T  25959808 ttttcaggtgttttcttcaatgtaagatgtcttgaaacttgagaaaagaattcctccctttataaagtctttt 25959736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 9e-42; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 117 - 280
Target Start/End: Original strand, 34488714 - 34488879
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||   |    
T  34488714 cacataaatcttcagatgtcttgttttgcctgatatgcttgatttctttgtgaattacatcaagaacaccctaaaattgctatgtttcaggaagaataca 34488813  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    |||||| |||||||||||||||  ||||||||| |    ||||||| |||||||||||||||||||    
T  34488814 attacatactcaaatatagaaatcaatacaaatttccctaaatcattggcaattgatctaatactc 34488879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 118 - 278
Target Start/End: Complemental strand, 22846034 - 22845872
Alignment:
Q  118 acataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaa 215  Q
    |||||||||||   ||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||  |||||||  |||    
T  22846034 acataaatctttgaatgtcttgcttttcctgatttgcttgatctcttcgtgaattacatcaagaacaccctaaaattgctatgttttgggaagaatagaa 22845935  T
Q  216 ttacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatac 278  Q
    |||||||||||||||||||||| | || ||||||    |||||||||||||||||||||||||    
T  22845934 ttacaaactcaaatatagaaaacattataaatgtccaaaaatcataggcaattgatctaatac 22845872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 17469797 - 17469632
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacgga 214  Q
    ||||||| ||||| |||| ||| |||||||| |||||| ||||||||||||||||||| |||| |||| |||||||||| |  ||||  ||||||||  |    
T  17469797 cacataattcttcggatgccttgctttgcct-atttgcatgatttcttcgtgaattacttcaaaaacatcctaaaattgctatgttttgggaagaacata 17469699  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| |||||||||||||||| | ||||| ||||   |||||||||||||||| |||||||||||    
T  17469698 attacatactcaaatatagaaaacattacaactgttccaaaatcataggcaattgctctaatactcc 17469632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 117 - 277
Target Start/End: Complemental strand, 24263990 - 24263828
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    |||||||| |||  |||||||| | ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||   |||||  | |||||  ||    
T  24263990 cacataaagctttggatgtcttgcattgcctgattttcttgatttctttgtgaattacatcaagaacaccctaaaattgctatgttttggaaagaataga 24263891  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaata 277  Q
    |||||| |||||||||||||||| | |||||||||    |||||||||| ||||||| |||||    
T  24263890 attacagactcaaatatagaaaacattacaaatgtcccaaaatcataggaaattgatataata 24263828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 279
Target Start/End: Complemental strand, 24162246 - 24162087
Alignment:
Q  121 taaatcttcagatgtcttt-ctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaatt 217  Q
    ||||||||| ||||||||| |||||||  |||||| |||||| || |||||||||||||| |||| ||||||||||||  ||||   |||||||  ||||    
T  24162246 taaatcttcggatgtctttgctttgcca-atttgcatgatttttt-gtgaattacatcaaaaacatcctaaaattgttatgttttgagaagaacataatt 24162149  T
Q  218 acaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    ||| |||||||||||||||| | |||||||||| |||||||||||||||||  |||||||||    
T  24162148 acagactcaaatatagaaaacattacaaatgttctgaaatcataggcaattattctaatact 24162087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 280
Target Start/End: Complemental strand, 19003974 - 19003840
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||| |||||||||||||  ||||| |||| |   |||||||| |||||||||||||||| | |||||    
T  19003974 gatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgttatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaa 19003875  T
Q  246 atgttatgaaatcataggcaattgatctaatactc 280  Q
    | ||  ||||||||||| |||||| ||||||||||    
T  19003874 aagtcctgaaatcatagacaattgttctaatactc 19003840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 281
Target Start/End: Original strand, 18832081 - 18832245
Alignment:
Q  118 acataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaa 215  Q
    |||||||||||| ||||| || ||||||| ||||||| |||||||||||||||||||||||||||||||||| | |||  || |||  |||| |     |    
T  18832081 acataaatcttcggatgtattgctttgcc-gatttgcatgatttcttcgtgaattacatcaagaacaccctatatttgcttttttttgggaaaactctga 18832179  T
Q  216 ttacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||| |||||||||||||||| | |||||||||   |||||||||| |||||| |||||||||||    
T  18832180 ttacatactcaaatatagaaaacattacaaatgtcccgaaatcatagacaattgctctaatactcc 18832245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 195
Target Start/End: Original strand, 18939378 - 18939455
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    ||||||||||||| |||||||| ||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18939378 cacataaatcttcggatgtcttgctttgtc-gatttgcatgatttcttcgtgaattacatcaagaacaccctaaaattg 18939455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 281
Target Start/End: Original strand, 18227475 - 18227633
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattac 219  Q
    ||||||| ||||||||| |||||| |||||||| |||||||||||||||||||||| | |||| |||||||||| |  ||||  |||||||| |||||||    
T  18227475 aaatctttagatgtcttgctttgc-tgatttgcatgatttcttcgtgaattacatcta-aacatcctaaaattgctaggttttgggaagaacagaattac 18227572  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    | | ||||||||| |||| | ||||||| ||  |||||| || ||||||| |||||||||||    
T  18227573 agagtcaaatataaaaaacattacaaattttccgaaatc-taagcaattgctctaatactcc 18227633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 281
Target Start/End: Original strand, 26348306 - 26348465
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgtttca--ggaagaacggaattaca 220  Q
    ||||||||||||||||  ||| ||  |||||| |||||||||||||||||||||||| | ||||||| ||||| | |||    |||||||  ||||||||    
T  26348306 aatcttcagatgtcttgattttcca-atttgcatgatttcttcgtgaattacatcaaaaccaccctagaattgctatttttttggaagaatagaattaca 26348404  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     |||||||||||||||| | ||||||||||  ||||||||| |||| || | |||||||||    
T  26348405 tactcaaatatagaaaacattacaaatgttccgaaatcataagcaaatgttataatactcc 26348465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 281
Target Start/End: Original strand, 24261924 - 24262090
Alignment:
Q  118 acataaatcttcagatgtcttt-ctttgcctgatttgcttgatttcttcgtgaattacat-caagaacaccctaaaattg--ttgtttcaggaagaacgg 213  Q
    |||||||| |||| |||||||| |||||  |||||||  |||||||||||||||||||||  || |||| ||| ||||||   |||||| | ||||||      
T  24261924 acataaatattcaaatgtctttgctttgg-tgatttgtgtgatttcttcgtgaattacataaaaaaacatccttaaattgctatgtttctgaaagaacat 24262022  T
Q  214 aattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||||| || |  |||||||||||    
T  24262023 aattacaaactcaaatatagaaaacattacaaatgttctgaaatcataggaaaattgtctaatactcc 24262090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 280
Target Start/End: Original strand, 25920721 - 25920853
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaa 246  Q
    |||||| |||||||||||||||||||||| | ||||||||  ||||||  |||||| |||||||  | ||||||||||||||||||||||    |||||     
T  25920721 atttgcatgatttcttcgtgaattacatccaaaacaccctggaattgttatgtttcgggaagaatag-attacaaactcaaatatagaaagccttacaat 25920819  T
Q  247 tgttatgaaatcataggcaattgatctaatactc 280  Q
    |||   ||||||||||||||||| ||||||||||    
T  25920820 tgtcccgaaatcataggcaattgctctaatactc 25920853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 26122270 - 26122405
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    |||||||  |||||| || ||||||||||||| |||||| |||||||| |  ||||||||||||||  ||||||| || ||||||||  ||| | |||||    
T  26122270 gatttgcaagatttcgtcatgaattacatcaaaaacaccttaaaattgctatgtttcaggaagaacataattacagacacaaatatattaaaaattacaa 26122369  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||   |||||||||| |||||| |||||||||||    
T  26122370 atgtcccgaaatcatagacaattgctctaatactcc 26122405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 280
Target Start/End: Complemental strand, 31600305 - 31600150
Alignment:
Q  126 cttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacat-caagaacaccctaaaattgttgt-ttcaggaagaacggaattacaaac 223  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| ||||||||  || ||||||||||||||| | | ||| |||| |     |||||||||    
T  31600305 cttcagatgtcttgctttgcc-gatttgcatgatttcttcgtaaattacataaaaaaacaccctaaaattgctatgttcgggaaaactctgattacaaac 31600207  T
Q  224 tcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    |||||||||||||| | |||||||||   |||||||||| |||||  ||||||||||    
T  31600206 tcaaatatagaaaatattacaaatgtcccgaaatcatagacaattactctaatactc 31600150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 17469930 - 17469829
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| ||||||||||| ||||||| |||||||| |||   || ||||||| |||| ||||||||| ||||||||| ||||||| ||||||| ||||||    
T  17469930 tgaaatccctgttttcttcgcctttttaggtgtttgtttttctgcaagatgtcttgg-acttgggaacataattcctccctttgtaaagtcttatgaggc 17469832  T
Q  115 ctc 117  Q
    |||    
T  17469831 ctc 17469829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 24265518 - 24265453
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaa 182  Q
    |||||||||||||||||||||| |||||||| ||||||  ||||||||| ||||| ||||||||||    
T  24265518 cacataaatcttcagatgtcttgctttgccttatttgcacgatttcttcatgaatcacatcaagaa 24265453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 24265652 - 24265551
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    ||||||||||||||| || ||||||| | ||||||  | ||||| ||||||| |||||||||| ||| | ||||||| ||||||| ||||||| ||||||    
T  24265652 tgaaatgcctgttttattcgcctttttaagtgttttctacaatgaaagatgtcttggaacttgtgaacaaaattcctccctttgtaaagtcttctgaggc 24265553  T
Q  115 ct 116  Q
    ||    
T  24265552 ct 24265551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 24342149 - 24342084
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaa 182  Q
    |||||||||||||||||||||| |||||||| ||||||  ||||||||| ||||| ||||||||||    
T  24342149 cacataaatcttcagatgtcttgctttgccttatttgcacgatttcttcatgaatcacatcaagaa 24342084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 24342283 - 24342182
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    ||||||||||||||| || ||||||| | ||||||  | ||||| ||||||| |||||||||| ||| | ||||||| ||||||| ||||||| ||||||    
T  24342283 tgaaatgcctgttttattcgcctttttaagtgttttctacaatgaaagatgtcttggaacttgtgaacaaaattcctccctttgtaaagtcttctgaggc 24342184  T
Q  115 ct 116  Q
    ||    
T  24342183 ct 24342182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 281
Target Start/End: Complemental strand, 24513396 - 24513260
Alignment:
Q  147 tgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaataca 244  Q
    |||||||| ||||||||||||||||||| |||| ||| |||||||||||   |||||| |||| |   |||||||||| ||||||||| |||| | ||||    
T  24513396 tgatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgatatgtttcgggaaaactagaattacaaattcaaatatataaaacattaca 24513297  T
Q  245 aatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||    ||||||||||||| |  |||||||||||    
T  24513296 aatgtcccaaaatcataggcaaattctctaatactcc 24513260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 195
Target Start/End: Original strand, 15520832 - 15520910
Alignment:
Q  117 cacataaatcttcagatgtcttt-ctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    |||| |||||||| ||||||||| ||||||| ||||||| |||||||||| ||||||||||||| |||||| ||||||||    
T  15520832 cacacaaatcttctgatgtctttgctttgcc-gatttgcatgatttcttcttgaattacatcaaaaacaccataaaattg 15520910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 279
Target Start/End: Original strand, 20860227 - 20860360
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| |||||| |||||||||||| |||| ||| ||||||||||| |  |||||  ||| |   |||||||| |||||||||||||||| | |||||    
T  20860227 gatttgcatgatttattcgtgaattacttcaaaaaccccctaaaattgctatgtttcgagaaaactagaattacagactcaaatatagaaaatattacaa 20860326  T
Q  246 atgttatgaaatcataggcaattgatctaatact 279  Q
    | ||    |||||||||||||||| |||||||||    
T  20860327 aagtcccaaaatcataggcaattgttctaatact 20860360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 24320731 - 24320640
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaa 237  Q
    ||||||| ||||||||||||||||||| |||| |||||||||||||||   |||||| |||| |   |||| ||| ||||||||||||||||    
T  24320731 gatttgcatgatttcttcgtgaattacttcaaaaacaccctaaaattgatatgtttcgggaaaactagaatgacagactcaaatatagaaaa 24320640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 29987844 - 29987979
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||| ||| |||| ||  ||||||||||||  |||||| |||| |   |||||||| ||| |||||||||||| | |||||    
T  29987844 gatttgcatgatttcttcgtgaagtacttcaaaaaacccctaaaattgttatgtttcgggaaaactagaattacatactaaaatatagaaaacattacaa 29987943  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||   ||||||||| ||||| | |||||||||||    
T  29987944 aagtcccgaaatcatatgcaatcgttctaatactcc 29987979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 24849849 - 24849778
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttg 98  Q
    |||||| ||||||| ||||||||  ||| ||||||||||| ||| |||||||||| ||||||||| ||||||    
T  24849849 tttcttcgcctttttaggtgtttgcttctatgtaagatgtcttgaaacttgggaacataattcctccctttg 24849778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 281
Target Start/End: Original strand, 26069205 - 26069272
Alignment:
Q  214 aattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||||| | || ||||||||||| | |||||||||| |||||||||| ||||||| |||||||||||    
T  26069205 aattacagattctaatatagaaaatattacaaatgttctgaaatcataagcaattgttctaatactcc 26069272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 18831946 - 18832048
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||||||||||||||| |||  ||  |||||||  ||||||||||||||| ||||||||||  || ||||||||| |||  || | ||||| ||||||    
T  18831946 tgaaatgcctgttttcttcgcccgttttggtgttttcttcaatgtaagatgtcttggaacttgataacataattcctccctccgtaacgtcttctgaggc 18832045  T
Q  115 ctc 117  Q
    |||    
T  18832046 ctc 18832048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 19761937 - 19761851
Alignment:
Q  31 tttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    ||||||||||  |||||||  ||| | ||| |||||||||||||||||||| ||||||||| ||| ||| | ||||| |||||||||    
T  19761937 tttgcctttttgggtgtttgcttctaagtatgatgttttggaacttgggaacataattcctccctctgtaacgtcttctgaggcctc 19761851  T

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Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 26117300 - 26117459
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaatt-acatcaagaacaccctaaaattgtt--gtttcaggaagaacggaatta 218  Q
    |||||||||||||||||| |||||| ||| | | ||||||||||||||||| |||  || ||||||| ||||||| |  ||||  |||||||| ||||||    
T  26117300 aaatcttcagatgtctttgtttgcc-gatatacatgatttcttcgtgaatttacaataa-aacacccaaaaattgctatgttttgggaagaacagaatta 26117397  T
Q  219 caaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    || ||||||||||| |||| | ||| || ||   ||||||||| ||||||| ||||| ||||    
T  26117398 cagactcaaatataaaaaacattactaacgtcccgaaatcataagcaattgttctaaaactc 26117459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 23387686 - 23387621
Alignment:
Q  216 ttacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||| |||||||||||||||| | |||||| ||  |||||||||||||||| | |||||||||||    
T  23387686 ttacagactcaaatatagaaaacattacaaaagtgctgaaatcataggcaatcgttctaatactcc 23387621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 26122144 - 26122213
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctt 96  Q
    |||||| ||||||| |||||||| |||| ||||||  | | |||||||||||||| ||||||||||||||    
T  26122144 tttcttcgcctttttaggtgtttgtttctatgtaatttttcttggaacttgggaacataattccttcctt 26122213  T

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Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 28254754 - 28254810
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaa 179  Q
    ||||||||||||||||| |||||||  |||||| ||||||||||||||||| ||||||    
T  28254754 aaatcttcagatgtcttgctttgcca-atttgcatgatttcttcgtgaattgcatcaa 28254810  T

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Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 19006990 - 19006922
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| |||||||||||||||| | |||||| ||   ||||||||||||||| | |||||||||||    
T  19006990 gaattacagactcaaatatagaaaacattacaaaagtcccgaaatcataggcaatcgttctaatactcc 19006922  T

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Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 24849777 - 24849672
Alignment:
Q  146 ctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatac 243  Q
    ||||| ||| |||||||||| ||||||||||||| || | |||||||||    |||||| ||||||||  ||||||| |||||||||||||||| | ||     
T  24849777 ctgatatgcatgatttcttcatgaattacatcaataa-atcctaaaatttctatgtttccggaagaacaaaattacagactcaaatatagaaaatattaa 24849679  T
Q  244 aaatgtt 250  Q
    |||||||    
T  24849678 aaatgtt 24849672  T

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Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 26253357 - 26253403
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    ||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  26253357 gatttgcatgattttttcgtgaattacatcaa-aacaccctaaaattg 26253403  T

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Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 19761814 - 19761699
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattac 219  Q
    ||||||||| ||||||| |||  || ||| ||| |||||||||||||||||||| ||| |||| ||||||||||   |||||  |||||||  |||||||    
T  19761814 aaatcttcatatgtcttgcttaacc-gatatgcatgatttcttcgtgaattacaacaa-aacatcctaaaattgctatgttttgggaagaatagaattac 19761717  T
Q  220 aaactcaaatatagaaaa 237  Q
    | ||| ||||||||||||    
T  19761716 agacttaaatatagaaaa 19761699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 22797562 - 22797496
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    |||||||| ||| |||||||||||| | |||||| |||  ||||||||||||||| | |||||||||    
T  22797562 gaattacatacttaaatatagaaaacattacaaaagttccgaaatcataggcaatcgctctaatact 22797496  T

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Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 34488599 - 34488653
Alignment:
Q  34 gccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataatt 88  Q
    |||||| |||||||||   |||||||||||||| |||||||||||||| ||||||    
T  34488599 gcctttaaaggtgtttgcgtcaatgtaagatgtcttggaacttgggaacataatt 34488653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 119 - 281
Target Start/End: Original strand, 7984976 - 7985140
Alignment:
Q  119 cataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaat 216  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||  ||||||  ||||    
T  7984976 cataaatctttggatgtcttgctttgcctgatttgcttgatttcttcgtgaattacttcaagaacaccctaaaattgctatgtttcgagaagaatagaat 7985075  T
Q  217 tacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||| ||| |||||||| ||| | |||||| ||||||||||||||| |||||||| |||||||||    
T  7985076 tacatactaaaatatagtaaacattacaaaagttatgaaatcatagacaattgatttaatactcc 7985140  T

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Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 24380587 - 24380427
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattac 219  Q
    ||||||||||||||| | |||||| |||| ||| |||||| ||| ||||||||||||||||||||||||||||| |  ||||  |||||||  |||||||    
T  24380587 aaatcttcagatgtcatcctttgc-tgatatgcatgatttattcatgaattacatcaagaacaccctaaaattgctatgttttgggaagaatagaattac 24380489  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    | |||||||||||||||| |||| |||||||  ||||||||||||||||| |||||||||||    
T  24380488 agactcaaatatagaaaacaatagaaatgttccgaaatcataggcaattgttctaatactcc 24380427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 123 - 281
Target Start/End: Complemental strand, 4007385 - 4007225
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca 220  Q
    ||||||| ||| |||| |||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||   |||||| |||||||  ||||||||    
T  4007385 aatcttcggatatcttgctttgcctaatttgtttgatttcttcgtgaatttcatcaagaacaccctaaaattgctatgtttcgggaagaatagaattaca 4007286  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     ||| |||||||||||| |||||||| ||    ||||||| | ||||||||||||||||||    
T  4007285 gacttaaatatagaaaacaatacaaacgtctcaaaatcattgacaattgatctaatactcc 4007225  T

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Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 279
Target Start/End: Original strand, 2638581 - 2638741
Alignment:
Q  121 taaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaatta 218  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||   |||||| |||||||  | ||||    
T  2638581 taaatcttcggatgtcttgctttgcctgatttgtttgatttcttcgtgaattactttaagaacaccctaaaattgctatgtttcgggaagaatagtatta 2638680  T
Q  219 caaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    || ||| |||||||||||| | |||||||||    |||| |||||  ||||||||||||||    
T  2638681 catacttaaatatagaaaacattacaaatgtcccaaaattatagggtattgatctaatact 2638741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 281
Target Start/End: Complemental strand, 19785014 - 19784854
Alignment:
Q  123 aatcttcagatgtcttt-ctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattac 219  Q
    |||||||| |||||||| ||||| | ||||||| |||||||||||||||||||||||| |||||||||||||||   | ||||||||||||| |||||||    
T  19785014 aatcttcacatgtctttgctttgtc-gatttgcatgatttcttcgtgaattacatcaaaaacaccctaaaattgctatatttcaggaagaacagaattac 19784916  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    | |||||||||||||||| | ||||||| |    |||| ||||||||||| ||| |||||||    
T  19784915 atactcaaatatagaaaacattacaaatatcccaaaattataggcaattgctcttatactcc 19784854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 277
Target Start/End: Complemental strand, 30117898 - 30117736
Alignment:
Q  116 tcacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgg 213  Q
    |||| ||||||||  |||||||| |||||||  |||||| ||||||||||||||||||| ||||||||||||||||||||   ||||| ||||||||  |    
T  30117898 tcacgtaaatctttggatgtcttgctttgcca-atttgcatgatttcttcgtgaattacctcaagaacaccctaaaattgctatgtttaaggaagaatag 30117800  T
Q  214 aattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaata 277  Q
    ||||||| |||||||||||||||| ||||| ||| |   |||||||||| |||||  |||||||    
T  30117799 aattacatactcaaatatagaaaacaatacgaatatcccgaaatcatagacaatttctctaata 30117736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 24381561 - 24381412
Alignment:
Q  121 taaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaatta 218  Q
    ||||||||| || ||||| ||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||   |||| | |||| ||  ||||||    
T  24381561 taaatcttcggacgtcttgctttgcc-gatttgcatgatttcttcgtgaattacatcaaaaacaccctaaaattgctatgttacgggaataatagaatta 24381463  T
Q  219 caaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattg 269  Q
    || |||||||||||||||| |||||||| ||   ||| |||||||||||||    
T  24381462 cagactcaaatatagaaaacaatacaaaagtaccgaagtcataggcaattg 24381412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 281
Target Start/End: Original strand, 14076986 - 14077145
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattac 219  Q
    ||||||||||||||||| | ||| | ||||||| |||||||||| ||||||||||||| |||||| |||||||| |  |||| ||||||||  |||| ||    
T  14076986 aaatcttcagatgtcttgcattgtc-gatttgcatgatttcttcatgaattacatcaa-aacaccataaaattgctatgttttaggaagaatagaataac 14077083  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    | |||||||||||||||| | |||||||||    |||||||| |||||||||||||||||||    
T  14077084 atactcaaatatagaaaatattacaaatgtcccaaaatcataagcaattgatctaatactcc 14077145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 22501693 - 22501771
Alignment:
Q  118 acataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt 197  Q
    |||||||||||| |||||||| ||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  22501693 acataaatcttcggatgtcttgctttgcc-gatttgcatgatttattcgtgaattacatcaagaacaccctaaaattgtt 22501771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 281
Target Start/End: Original strand, 19791256 - 19791416
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca 220  Q
    |||||| ||| |||||  |||||||| ||||||||||||||||||||||||| |||||||| |  ||||||||   ||||| ||||||||   |||||||    
T  19791256 aatctttagaggtcttgatttgcctggtttgcttgatttcttcgtgaattacttcaagaaccctataaaattgctatgttttaggaagaatcaaattaca 19791355  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     ||||||||||| |||| | |||||||||   |||||||||| |||||| | |||||||||    
T  19791356 gactcaaatataaaaaatattacaaatgtcccgaaatcatagacaattgttttaatactcc 19791416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 24380717 - 24380624
Alignment:
Q  24 tgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||| |||||||||| ||||||||  ||| ||||||||||| || ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  24380717 tgttttttttgcctttttaggtgtttgcttctatgtaagatgtctttgaacttgggaacataattccttgctttgtgaagtcttctgaggcctc 24380624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 30832827 - 30832962
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacg-gaattacaaactcaaatatagaaaagaataca 244  Q
    ||||||| ||||||||||||||||||| |||| |||  |||||||||| |  ||||| |||| |||  |||||||||||||||| |||||||| | ||||    
T  30832827 gatttgcatgatttcttcgtgaattacttcaaaaacctcctaaaattgctatgtttc-ggaaaaactagaattacaaactcaaacatagaaaacattaca 30832925  T
Q  245 aatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| ||||||||||| |||||| |||||||||||    
T  30832926 aatgttctgaaatcatagacaattgctctaatactcc 30832962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 14271699 - 14271864
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacgga 214  Q
    ||||| ||||||| |||||||| |||||||  |||||| |||||||||||||||||||||||||||||||||||||||    |||||| |||| |         
T  14271699 cacattaatcttcggatgtcttgctttgcca-atttgcatgatttcttcgtgaattacatcaagaacaccctaaaatttctatgtttcgggaaaactctg 14271797  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| |||||||||||||||| |  ||||||||    |||||||||||||||  |||||||||||    
T  14271798 attacatactcaaatatagaaaacatcacaaatgtcccaaaatcataggcaattactctaatactcc 14271864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 24091673 - 24091795
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    |||||||||| ||  |||||||  ||||  |||||||||| ||||||||||||||||  ||||||||||||||||||||  ||||||| |||||||  ||    
T  24091673 cacataaatcatcgaatgtcttgttttgtttgatttgctttatttcttcgtgaattagttcaagaacaccctaaaattgctttgtttcgggaagaataga 24091772  T
Q  215 attacaaactcaaatatagaaaa 237  Q
    |||||| |||||| |||||||||    
T  24091773 attacatactcaattatagaaaa 24091795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 281
Target Start/End: Original strand, 20400221 - 20400357
Alignment:
Q  147 tgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaataca 244  Q
    |||||||||||||||||||||||||||| |||| ||| |||||||||||   |||||| |||| |    |||||||||||||||||||||||| | ||||    
T  20400221 tgatttgcttgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactataattacaaactcaaatatagaaaacattaca 20400320  T
Q  245 aatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || ||   ||||||||||| ||| | |||||||||||    
T  20400321 aaagtcccgaaatcataggaaatcgttctaatactcc 20400357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 30118027 - 30117929
Alignment:
Q  17 aaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcct 116  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||||| ||| | |||  || ||||||  ||||||||||||||||    
T  30118027 aaatgcctgttttctttgcctttttaggtgtttgcttcaatgtaagatgtcttggaacttgagaacagaat--ctccctttgcaaagtcttttgaggcct 30117930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 18007432 - 18007555
Alignment:
Q  156 tgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatg 253  Q
    |||||||||||||||||||||||| |||||||||  ||||  |||||||  |||||| | ||||||||||||||||| |||||| | ||||||||||  |    
T  18007432 tgatttcttcgtgaattacatcaaaaacaccctaggattgctttgtttcgagaagaatgaaattacaaactcaaataaagaaaacattacaaatgtttcg 18007531  T
Q  254 aaatcataggcaattgatctaata 277  Q
    |  |||||| |||||| |||||||    
T  18007532 atgtcatagacaattgttctaata 18007555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 26139676 - 26139811
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||| |||| |||||| |  ||||  |||| |   ||||||||||||||||||||||||| | |||||    
T  26139676 gatttgcatgatttcttcgtgaattacttcaaaaacccccttaaattgctatgttttgggaaaacttgaattacaaactcaaatatagaaaacattacaa 26139775  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | |||  ||||||||||||||| | |||||||||||    
T  26139776 aagttccgaaatcataggcaatcgttctaatactcc 26139811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 280
Target Start/End: Complemental strand, 37527259 - 37527101
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgt--ttcaggaagaacggaattaca 220  Q
    |||||||||| |||||  |||||||||||||||||||| |||||||| |||| ||| |||| | ||||||||| | |  ||  |||||||  |||||| |    
T  37527259 aatcttcagaggtcttgatttgcctgatttgcttgatt-cttcgtgatttacttcaggaaccctctaaaattgctatgctttgggaagaatagaattata 37527161  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
     |||||||||||||||| | |||||||||   |||| |||||||||||| ||||||||||    
T  37527160 gactcaaatatagaaaacattacaaatgtcccgaaaccataggcaattgctctaatactc 37527101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 12343096 - 12343050
Alignment:
Q  151 ttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  12343096 ttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt 12343050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 269
Target Start/End: Complemental strand, 24518820 - 24518673
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattac 219  Q
    |||||||||| ||| ||  |||||| ||||||| ||||||||| ||||||||||| || |||||| ||||||||||  |||||||||||||   ||||||    
T  24518820 aaatcttcaggtgttttattttgcc-gatttgcatgatttctttgtgaattacatgaa-aacaccttaaaattgttatgtttcaggaagaatataattac 24518723  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattg 269  Q
    | | | |||||||||||| | ||||||| || |||||||||| |||||||    
T  24518722 agaattaaatatagaaaacattacaaatattctgaaatcataagcaattg 24518673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 118 - 281
Target Start/End: Complemental strand, 25180959 - 25180795
Alignment:
Q  118 acataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacggaa 215  Q
    ||||||||||||| ||||||| | | |||| | ||||||||||||||||||||||||||||||||  | ||||||||    | ||||| | ||||  |||    
T  25180959 acataaatcttcaaatgtcttgcgt-gcctaaattgcttgatttcttcgtgaattacatcaagaatgctctaaaatttctatctttcacgtagaatagaa 25180861  T
Q  216 ttacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||| | ||| |||||||||||| | ||| || ||   |||||||||||||||||||||||||||||    
T  25180860 ttatagacttaaatatagaaaacattacgaacgtcccgaaatcataggcaattgatctaatactcc 25180795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 281
Target Start/End: Original strand, 6886533 - 6886691
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattaca 220  Q
    ||||||||||||||||  ||||||  ||| || ||||||||| |||||||||| ||||| ||||||||||||| |  |||||||||| |     ||||||    
T  6886533 aatcttcagatgtcttg-tttgcca-attagcgtgatttctttgtgaattacaacaagaccaccctaaaattgatatgtttcaggaaaactctgattaca 6886630  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     |||||||||||||||| | |||||||||   ||||||||||||||||  |||||||||||    
T  6886631 gactcaaatatagaaaacattacaaatgtcccgaaatcataggcaattactctaatactcc 6886691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 281
Target Start/End: Original strand, 17835410 - 17835566
Alignment:
Q  125 tcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaa 222  Q
    |||||||||||||| |||| | |||| ||| |||||| ||||||||||||| ||| |||| |||||||||  |  |||||||||||||   |||||||||    
T  17835410 tcttcagatgtcttgctttac-tgatatgcatgattttttcgtgaattacaacaa-aacatcctaaaatttctatgtttcaggaagaatataattacaaa 17835507  T
Q  223 ctcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || ||||||||||||   |||||||||   ||||||||| | ||||| |||||||||||    
T  17835508 cttaaatatagaaaatgttacaaatgtcccgaaatcataagaaattgttctaatactcc 17835566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 276
Target Start/End: Original strand, 17980658 - 17980811
Alignment:
Q  124 atcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaa 221  Q
    ||||| |||||||||  |||||| ||||||| |||||| ||||||||||||||||| |||| |||| |||||   ||||||  ||||||  ||| |||||    
T  17980658 atctttagatgtcttgatttgcc-gatttgcatgattttttcgtgaattacatcaaaaacatcctagaattgctatgtttcgtgaagaatagaactacaa 17980756  T
Q  222 actcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaat 276  Q
    |||||||||||||||| | | |||||||    |||||||| ||||||| ||||||    
T  17980757 actcaaatatagaaaacattgcaaatgtcccaaaatcataagcaattgttctaat 17980811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 281
Target Start/End: Complemental strand, 24851173 - 24851018
Alignment:
Q  127 ttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca-aac 223  Q
    ||||||| |||| ||||||| ||||||| |||||| || |||||||||||||| |||| ||||||||||   |||||  |||||||  |||||| |  ||    
T  24851173 ttcagatatcttgctttgcc-gatttgcatgatttatttgtgaattacatcaa-aacatcctaaaattgctatgttttgggaagaatagaattatatgac 24851076  T
Q  224 tcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| ||||||| | |||||||||| |||||||||| ||||||| | |||||||||    
T  24851075 tcaaatgtagaaaacattacaaatgttctgaaatcataagcaattgttataatactcc 24851018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 7984844 - 7984941
Alignment:
Q  20 tgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    ||||||||||||| |||| || || |||||  ||||||||||||||| ||||||||| |||| ||||||||| || |||| ||||||| ||| |||||    
T  7984844 tgcctgttttcttcgcctatttagatgttttcttcaatgtaagatgtcttggaactttggaacataattcctcccattgtaaagtcttatgatgcctc 7984941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 19265718 - 19265845
Alignment:
Q  156 tgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatg 253  Q
    ||||||||||||||||||| |||| ||| ||||||||||| |  ||||| |||| |   |||||||| | ||||||||||| || | |||||| ||   |    
T  19265718 tgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactagaattacagattcaaatatagacaacattacaaaagtcccg 19265817  T
Q  254 aaatcataggcaattgatctaatactcc 281  Q
    |||||||||||||||| |||||||||||    
T  19265818 aaatcataggcaattgttctaatactcc 19265845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 24583380 - 24583245
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| |||||| |||||||||||| |||| ||| ||||||||||| |  |||| |||||     |||||||||| |||||||||||||| | |||||    
T  24583380 gatttgcatgattttttcgtgaattacttcaaaaaccccctaaaattgctatgttttaggaaacctagaattacaaattcaaatatagaaaacattacaa 24583281  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||   ||||||||||||||| | |||||||||||    
T  24583280 aagtcccgaaatcataggcaatcgttctaatactcc 24583245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 13313410 - 13313345
Alignment:
Q  216 ttacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||||||||||||||||| | |||||| ||   ||||||||||||||||| |||||||||||    
T  13313410 ttacaaactcaaatatagaaaacattacaaaagtcccgaaatcataggcaattgttctaatactcc 13313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 25481715 - 25481579
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccc-taaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaataca 244  Q
    ||||||| ||||||||||||||||||| |||| | | ||| | |||||| |  ||||| |||| |   |||||||| |||||||||||||||| | ||||    
T  25481715 gatttgcatgatttcttcgtgaattacttcaaaaccccccctcaaattgatatgtttctggaaaactagaattacagactcaaatatagaaaacattaca 25481616  T
Q  245 aatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || |||  ||||||||||||||| | |||||||||||    
T  25481615 aaagtttcgaaatcataggcaatcgttctaatactcc 25481579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 15176640 - 15176506
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||| ||||||||||| |  ||||  |||| |   |||||||| |||||||||||||||| |  ||||    
T  15176640 gatttgcatgatttcttcgtgaattacttcaaaaac-ccctaaaattgctatgttttgggaaaactagaattacagactcaaatatagaaaacataacaa 15176542  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||   ||||||||||||||| | |||||||||||    
T  15176541 aagtcccgaaatcataggcaatcgttctaatactcc 15176506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 24908859 - 24908923
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaata 277  Q
    ||||||||||||||||||||||||| | ||||||||||  ||||||| | | |||||||||||||    
T  24908859 gaattacaaactcaaatatagaaaacattacaaatgtttcgaaatcaaaagtaattgatctaata 24908923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 24911080 - 24911144
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaata 277  Q
    ||||||||||||||||||||||||| | ||||||||||  ||||||| | | |||||||||||||    
T  24911080 gaattacaaactcaaatatagaaaacattacaaatgtttcgaaatcaaaagtaattgatctaata 24911144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 18570418 - 18570532
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaa 246  Q
    |||||| ||||||||||||||||||| |||| ||| |||| |||||| |  ||||  |||| |   |||||||| |||||||||||||||| | ||||||    
T  18570418 atttgcatgatttcttcgtgaattacttcaaaaaccccctcaaattgctatgttttgggaaaactagaattacagactcaaatatagaaaacattacaaa 18570517  T
Q  247 tgttatgaaatcata 261  Q
     ||| ||||||||||    
T  18570518 agttctgaaatcata 18570532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 24109243 - 24109108
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgt-ttcaggaagaacg-gaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||| ||||||||| |||| ||| ||||||||||| | | ||| || | |||  |||||||| |||||||||||||||| | | |||    
T  24109243 gatttgcatgatttctttgtgaattacttcaaaaaccccctaaaattgctatgttctgggaaaactagaattacagactcaaatatagaaaacatttcaa 24109144  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||   ||||||||||| ||||| |||||||||||    
T  24109143 aagtcccgaaatcataggaaattgctctaatactcc 24109108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 24381687 - 24381601
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgagg 113  Q
    |||||||| |||||  |||||||  ||  ||||||||||| |||||||||||||| | ||||||||||||||| | ||||| |||||    
T  24381687 tttctttgtctttttgggtgttttcttatatgtaagatgtcttggaacttgggaacaaaattccttcctttgtaatgtcttctgagg 24381601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 21230814 - 21230914
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaa 246  Q
    |||||| ||||||||||||||||||| |||| ||  |||||||||||   ||||||||||| |   |||||||||||| ||||||| |||| | ||||||    
T  21230814 atttgcatgatttcttcgtgaattacttcaaaaaacccctaaaattgctatgtttcaggaaaactagaattacaaactaaaatataaaaaacattacaaa 21230913  T
Q  247 t 247  Q
    |    
T  21230914 t 21230914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 14271602 - 14271666
Alignment:
Q  52 ttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcct 116  Q
    ||||||||||||||| |||||||||| ||| ||||||||| ||| ||| | ||||| ||||||||    
T  14271602 ttcaatgtaagatgtcttggaacttgagaacataattcctccctatgtaacgtcttctgaggcct 14271666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 24388580 - 24388446
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||| |||||||||||   |||||| |||| |    ||||||| | |||||||||||||| | |||||    
T  24388580 gatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactataattacaga-tcaaatatagaaaacattacaa 24388482  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||    |||||||||||||| | |||||||||||    
T  24388481 aagtcccaaaatcataggcaatcgttctaatactcc 24388446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 24091020 - 24090953
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    |||||||| |||||||||||||||| | |||||  ||   ||||||||||||||||| ||||||||||    
T  24091020 gaattacagactcaaatatagaaaacattacaagagtcccgaaatcataggcaattgttctaatactc 24090953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 35861695 - 35861630
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacacccta 189  Q
    |||||||||||||| ||  |||||| ||||||| ||||||||| |||||||||||||| |||||||||    
T  35861695 aaatcttcagatgttttgttttgcc-gatttgcatgatttctttgtgaattacatcaa-aacacccta 35861630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 277
Target Start/End: Original strand, 5856678 - 5856798
Alignment:
Q  158 atttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaa 255  Q
    |||||||||||||||||| ||| |||| ||| ||||||||  ||||||| |  ||  |||||||| |||||||| ||||||| | |||||||||   |||    
T  5856678 atttcttcgtgaattacaacaa-aacatccttaaattgttatgtttcagaagaaatagaattacagactcaaatgtagaaaacattacaaatgtcccgaa 5856776  T
Q  256 atcataggcaattgatctaata 277  Q
    | ||||  ||||||||||||||    
T  5856777 accataaacaattgatctaata 5856798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 22501586 - 22501660
Alignment:
Q  43 ggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||||  ||||||||||||| | |||||||||||||| | ||||||| ||| ||| | ||||| |||||||||    
T  22501586 ggtgttttcttcaatgtaagatatcttggaacttgggaacagaattcctccctctgtaatgtcttctgaggcctc 22501660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 6286177 - 6286218
Alignment:
Q  144 gcctgatttgcttgatttcttcgtgaattacatcaagaacac 185  Q
    |||||||||||| ||||||||| |||||||| ||||||||||    
T  6286177 gcctgatttgctcgatttcttcatgaattacttcaagaacac 6286218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 28858700 - 28858760
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaaca 184  Q
    ||||||||||||||||  |||||| ||| ||  |||||||||||||||||||||||| ||||    
T  28858700 aatcttcagatgtcttgatttgcc-gatctgtatgatttcttcgtgaattacatcaaaaaca 28858760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 30487709 - 30487784
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgt 199  Q
    |||||| ||||||||||  |||||| ||| ||| |||||| ||||||||||||| ||| |||| ||||||||||||||    
T  30487709 aaatctccagatgtcttgttttgcc-gatatgcatgattttttcgtgaattacaacaa-aacatcctaaaattgttgt 30487784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 6e-40; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 18545129 - 18545295
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacgga 214  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||||| | | |||||||  ||||||||||| |||||| |  ||||| |||||||  ||    
T  18545129 cacataaatcttcggatgtcttgctttgcctgatttgcttgctttctgcattaattacaataagaacaccctgaaattgctatgtttcgggaagaataga 18545228  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||||||||||||||||||||| ||| |||||||   |||||||||||||||||||||||||||||    
T  18545229 attacaaactcaaatatagaaaacaattcaaatgtcccgaaatcataggcaattgatctaatactcc 18545295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 150 - 281
Target Start/End: Original strand, 18553179 - 18553312
Alignment:
Q  150 tttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaat 247  Q
    ||||| |||||||||| |||||||||| ||||||||| |||||||| |  |||| ||||||||  |||||||| |||||||||||||||| ||| |||||    
T  18553179 tttgcatgatttcttcatgaattacattaagaacaccataaaattgctatgttttaggaagaatagaattacagactcaaatatagaaaacaattcaaat 18553278  T
Q  248 gttatgaaatcataggcaattgatctaatactcc 281  Q
    |||  ||||| |||||||||||||||||||||||    
T  18553279 gttccgaaatgataggcaattgatctaatactcc 18553312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 32086928 - 32087071
Alignment:
Q  140 ctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaa 237  Q
    |||||| |||||||||||||||||||||||||| | | ||||||||||||||||||   |||||| |||||||  ||||||||||| |||||||| ||||    
T  32086928 ctttgcttgatttgcttgatttcttcgtgaattgctttaagaacaccctaaaattgctatgtttcgggaagaatagaattacaaacccaaatataaaaaa 32087027  T
Q  238 gaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     | |||||||||    ||||||||| ||||||||||||||||||    
T  32087028 cattacaaatgtcgcaaaatcatagacaattgatctaatactcc 32087071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 281
Target Start/End: Complemental strand, 23010282 - 23010117
Alignment:
Q  118 acataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaa 215  Q
    ||||||||||||  ||||||| |||||||| |||||||||||||||| |||||||| ||||| ||||   ||||||||   ||||||||||||||  |||    
T  23010282 acataaatcttcgcatgtcttgctttgcctaatttgcttgatttctttgtgaattatatcaataacatattaaaattgctatgtttcaggaagaatagaa 23010183  T
Q  216 ttacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||  | |||||||||||||||| |||||||||||    |||||  ||||| |||||||||||||||    
T  23010182 ttcaagactcaaatatagaaaacaatacaaatgtcccaaaatcggaggcagttgatctaatactcc 23010117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 123 - 278
Target Start/End: Original strand, 29834728 - 29834885
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgt--ttcaggaagaacggaattaca 220  Q
    |||||||||| ||| | |||| ||||||||||||||||||||  |||||||  |||||||| || |||||||| | |  ||| |||||||   |||||||    
T  29834728 aatcttcagaggtcctgctttacctgatttgcttgatttcttaatgaattatttcaagaaccccttaaaattgctatctttcgggaagaataaaattaca 29834827  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatac 278  Q
    ||||||||||||||||| | |||||||||  | ||||||||| |||||||||||||||    
T  29834828 aactcaaatatagaaaacattacaaatgtactaaaatcatagacaattgatctaatac 29834885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 17891588 - 17891754
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacgga 214  Q
    ||||||||||||| ||||||||| |||    |||||||  ||||||||||||||||||||||| | |||| ||||| || |  ||||  |||||||| |     
T  17891588 cacataaatcttcggatgtctttgttttgtcgatttgcaggatttcttcgtgaattacatcaaaagcaccttaaaactgctatgttttgggaagaacagg 17891687  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||||||||||||||||||||| | |||||||||   ||||||||||| ||||  |||||||||||    
T  17891688 attacaaactcaaatatagaaaacattacaaatgtcccgaaatcataggaaattactctaatactcc 17891754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 134 - 281
Target Start/End: Original strand, 29850892 - 29851039
Alignment:
Q  134 gtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatat 231  Q
    ||||| ||| ||||||||||||||||||||||||||||    |||||||| |||||||||||   |||||| |||||||  |||||||| ||||||| ||    
T  29850892 gtcttgcttagcctgatttgcttgatttcttcgtgaat--attcaagaaccccctaaaattgctatgtttcgggaagaatagaattacatactcaaagat 29850989  T
Q  232 agaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| | |||||||||    |||||||||| |||||||||||||||||    
T  29850990 agaaaacattacaaatgtctcaaaatcatagggaattgatctaatactcc 29851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 281
Target Start/End: Complemental strand, 11464546 - 11464392
Alignment:
Q  128 tcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactc 225  Q
    ||||| |||||  ||| |||||||| |||||||||||||||| |||| |||| ||| |||||||||||   |||||| |||||||  ||| |||| ||||    
T  11464546 tcagaggtcttgttttacctgatttccttgatttcttcgtgatttacttcaataaccccctaaaattgctatgtttcgggaagaatagaactacatactc 11464447  T
Q  226 aaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||||||| | |||||||||    ||||||||||| ||||||||||||||||    
T  11464446 aaatatagaaaacattacaaatgtccctaaatcataggc-attgatctaatactcc 11464392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 25883719 - 25883620
Alignment:
Q  10 ggtggtgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtctttt 109  Q
    |||| |||||||| ||||||||| ||| ||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||| ||| ||  |||||||||    
T  25883719 ggtgctgaaatgcatgttttcttcgccctttgaggtgtttacttcaatgtaagatgtcttggaacttgggaacataattcctccctctgcaaagtctttt 25883620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 25532124 - 25532259
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||   |||||| |||| |   |||||||| ||| |||||||||||| | |||||    
T  25532124 gatttgcatgatttcttcgtgaattgcttcaagaacaccctaaaattgctatgtttcgggaaaactagaattacagactgaaatatagaaaacattacaa 25532223  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    |  | | ||||||||||||||| | |||||||||||    
T  25532224 aattcacgaaatcataggcaatcgttctaatactcc 25532259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 277
Target Start/End: Original strand, 27420935 - 27421090
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattac 219  Q
    ||||||||||||||||| ||||||| ||| | | ||||||| |||||||||||| ||| || | |||||||||| |  ||||| |||||||   ||||||    
T  27420935 aaatcttcagatgtcttgctttgcc-gatatacatgatttcatcgtgaattacaacaa-aatatcctaaaattgctatgtttcgggaagaatataattac 27421032  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaata 277  Q
    | |||||||||||||||| | |||||||||   ||||||||| ||| |||||||||||    
T  27421033 atactcaaatatagaaaacattacaaatgtcccgaaatcataagcagttgatctaata 27421090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 27907731 - 27907610
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| || ||||||||||||   |||||| |||| |   ||||||||||||||||||||||||| | |||||    
T  27907731 gatttgcatgatttcttcgtgaattacttcaaaaaaaccctaaaattgctatgtttcgggaaaactagaattacaaactcaaatatagaaaacattacaa 27907632  T
Q  246 atgttatgaaatcataggcaat 267  Q
    | ||   |||||||||||||||    
T  27907631 aagtcccgaaatcataggcaat 27907610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 281
Target Start/End: Complemental strand, 29717588 - 29717432
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca 220  Q
    ||||||||||||| || ||||||| ||||||| | |||||||||||||||||||||| || ||| || |||||   |||||| |||||||   |||||||    
T  29717588 aatcttcagatgtattgctttgcc-gatttgcattatttcttcgtgaattacatcaa-aaaaccttagaattgctatgtttcgggaagaa--taattaca 29717493  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     |||||||||||||||| | ||||||| |   ||||||||| ||||||||| |||||||||    
T  29717492 tactcaaatatagaaaacattacaaatatcccgaaatcataagcaattgatataatactcc 29717432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 25883572 - 25883461
Alignment:
Q  139 tctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaa 236  Q
    ||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||||  | | |||| ||||||||||| |||    
T  25883572 tctttgccatatttgtttgatttcttcatgaattacatcaagaacaccctaaaattgctacgtttcaggaagaataggactacatactcaaatata-aaa 25883474  T
Q  237 agaatacaaatgt 249  Q
    | |||| ||||||    
T  25883473 acaatataaatgt 25883461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 17350866 - 17351001
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||  |||| ||| ||||||||||| |  ||||| |||| |   |||||||  |||||||||||||||| | |||||    
T  17350866 gatttgcatgatttcttcgtgaattaattcaaaaaccccctaaaattgctatgtttcgggaaaactagaattacggactcaaatatagaaaacattacaa 17350965  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||  ||||||||||| |||||| |||||||||||    
T  17350966 aagtcctgaaatcatagacaattgttctaatactcc 17351001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 25537444 - 25537579
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| | | ||||||||||| |  ||||| |||| |   |||||||| |||||||||||||||| | |||||    
T  25537444 gatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaa 25537543  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||   ||||||||||||||| | |||||||||||    
T  25537544 aagtccagaaatcataggcaatcgctctaatactcc 25537579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 26651869 - 26651712
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgtttcag-gaagaacggaattaca 220  Q
    ||||||||| ||||||| ||||||| ||| ||| | |||||||| ||||||||| ||| |||||| |||||||| | |||  | ||||||  ||||||||    
T  26651869 aaatcttcaaatgtcttgctttgcc-gatatgcataatttcttcatgaattacaacaa-aacaccttaaaattgctattttcgagaagaatagaattaca 26651772  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
     ||| |||||||||||| | |||||||||   ||||||||| ||||||| ||||||||||    
T  26651771 tacttaaatatagaaaacattacaaatgtctcgaaatcataagcaattgctctaatactc 26651712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 267
Target Start/End: Complemental strand, 32141622 - 32141479
Alignment:
Q  125 tcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca-a 221  Q
    ||||||||||||||  |||||| ||||||| ||||||||||||||||| |||||| |||| | || |||||   ||||||||||||||  ||||||||      
T  32141622 tcttcagatgtcttgttttgcc-gatttgcatgatttcttcgtgaatttcatcaa-aacatcttagaattgctatgtttcaggaagaattgaattacatg 32141525  T
Q  222 actcaaatatagaaaagaatacaaatgttatgaaatcataggcaat 267  Q
    |||||||||||||||| | |||||||||   ||||||||| |||||    
T  32141524 actcaaatatagaaaacattacaaatgtctcgaaatcataagcaat 32141479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 18971003 - 18970847
Alignment:
Q  125 tcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacggaattacaaa 222  Q
    ||||| |||||||| ||||||| |||| || |||||||||||||||||||||||| |  |||||||||||    ||||||||||||||   ||||||| |    
T  18971003 tcttctgatgtcttgctttgccggatt-gcatgatttcttcgtgaattacatcaa-agtaccctaaaattactatgtttcaggaagaataaaattacaga 18970906  T
Q  223 ctcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     ||||| |||||||| | |||||||||    ||||| || ||||||| |||||||||||    
T  18970905 ttcaaaaatagaaaacattacaaatgtcgcaaaatcgtaagcaattgctctaatactcc 18970847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 11464644 - 11464586
Alignment:
Q  59 taagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||| ||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  11464644 taagttgtcttggaacttgggaatagaattcctccctttgttaagtcttttgaggcctc 11464586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 18553023 - 18553089
Alignment:
Q  17 aaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaata 83  Q
    |||||| ||||||||||||||||| ||||||||  |||||| | |||||| ||||||||||||||||    
T  18553023 aaatgcttgttttctttgccttttgaggtgttttcttcaatattagatgtcttggaacttgggaata 18553089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 281
Target Start/End: Original strand, 22627248 - 22627407
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattac 219  Q
    ||||||||| ||||||| ||||||| ||| ||| |||||||||||||||||||| ||| |||| ||||||||||   ||||  ||||||||  |||||||    
T  22627248 aaatcttcaaatgtcttgctttgcc-gatatgcatgatttcttcgtgaattacaacaa-aacatcctaaaattgctatgttataggaagaatagaattac 22627345  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    | | ||||||| |||||| | ||||||||     ||||||||| |||||  |||||||||||    
T  22627346 agaatcaaataaagaaaacattacaaatgcccctaaatcatagacaatttctctaatactcc 22627407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 34580007 - 34579935
Alignment:
Q  123 aatcttcagatgt-ctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    ||||||| ||||| ||| ||||||| ||||||| ||||||||||||||||||||| || |||||||||||||||    
T  34580007 aatcttcggatgttcttgctttgcc-gatttgcatgatttcttcgtgaattacataaaaaacaccctaaaattg 34579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 34585756 - 34585684
Alignment:
Q  123 aatcttcagatgt-ctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    ||||||| ||||| ||| ||||||| ||||||| ||||||||||||||||||||| || |||||||||||||||    
T  34585756 aatcttcggatgttcttgctttgcc-gatttgcatgatttcttcgtgaattacataaaaaacaccctaaaattg 34585684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 18758189 - 18758324
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| || |||||||||||||||| |||| | | | ||||||||| |  ||||| |||| |   |||||||| |||||||||||||||| | |||||    
T  18758189 gatttgcatgttttcttcgtgaattacttcaaaacccctctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaa 18758288  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||   ||||||||||||||| | |||||||||||    
T  18758289 aagtcccgaaatcataggcaatcgttctaatactcc 18758324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45572727 - 45572641
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45572727 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45572641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45576394 - 45576308
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45576394 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45576308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45580061 - 45579975
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45580061 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45579975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45583728 - 45583642
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45583728 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45583642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45587395 - 45587309
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45587395 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45587309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45591062 - 45590976
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45591062 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45590976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45594729 - 45594643
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45594729 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45594643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45598396 - 45598310
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45598396 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45598310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45602063 - 45601977
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45602063 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45601977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45605730 - 45605644
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45605730 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45605644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45609397 - 45609311
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45609397 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45609311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45613064 - 45612978
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45613064 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45612978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 45616731 - 45616645
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| |||||||| ||| |||  ||| ||||||||||| |||||||||||||| | ||||||| ||||||| ||||||| ||||||    
T  45616731 tttcttcgcctttta-ggtatttgcttctatgtaagatgtcttggaacttgggaacaaaattcctccctttgtaaagtcttctgaggc 45616645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 19198712 - 19198639
Alignment:
Q  121 taaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    |||||||||||| || || ||||||| ||||||| ||||||||| ||||||| |||||||||||||  |||||||    
T  19198712 taaatcttcagacgtgttgctttgcc-gatttgcatgatttctttgtgaatttcatcaagaacacctaaaaattg 19198639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 36191428 - 36191339
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcct 116  Q
    |||||||||||||| ||||||||  ||||||||||| | | ||||||||||  || ||||||||| || |||| ||||||| ||| ||||    
T  36191428 tttctttgcctttttaggtgtttgcttcaatgtaagttatcttggaacttgaaaacataattcctccccttgtaaagtcttatgaagcct 36191339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 27420808 - 27420896
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcc 115  Q
    |||||| |||||||  |||||||  ||| ||||||||||| ||||||||||| || ||| |||||||| |||| | ||||| |||||||    
T  27420808 tttcttcgcctttttgggtgtttgcttctatgtaagatgtcttggaacttggaaacatacttccttcccttgtaatgtcttctgaggcc 27420896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 8501735 - 8501674
Alignment:
Q  131 gatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt 194  Q
    |||||||||||||| | ||||||| |||||| || |||||||||||||| ||||||||||||||    
T  8501735 gatgtctttctttgtc-gatttgcatgatttatttgtgaattacatcaa-aacaccctaaaatt 8501674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 23010413 - 23010338
Alignment:
Q  16 gaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattcct 91  Q
    ||||| ||||||||||| |  ||| |||||||||  ||||||||||||||| |||| |||| |||| |||||||||    
T  23010413 gaaattcctgttttcttcgtatttcaaggtgtttccttcaatgtaagatgtattggtacttaggaacataattcct 23010338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 32086751 - 32086842
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtct 106  Q
    ||||||| || |||||||  ||| || ||||||||   |||| |||| |||| |||||||||||||| ||||||||| ||||||| ||||||    
T  32086751 tgaaatgtctattttcttctcctgttgaggtgttttcatcaaagtaaaatgtcttggaacttgggaacataattcctccctttgtaaagtct 32086842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 281
Target Start/End: Original strand, 19139507 - 19139665
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca 220  Q
    ||||||| || |||||  ||||||| ||||||||||||||||||||  |||| ||||||  ||| ||||||||   ||||||  ||| ||  ||||||      
T  19139507 aatcttctgaggtcttgatttgccttatttgcttgatttcttcgtgttttacttcaaga--accttaaaattgctatgtttcgagaataatagaattatt 19139604  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||||||  |||| | |||||||||    |||||||| |||||||||| ||||||||    
T  19139605 aactcaaatatttaaaacattacaaatgtcccaaaatcataagcaattgatccaatactcc 19139665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 38796134 - 38796205
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaa---tacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| ||||||||||| |||| ||   ||||||||||  |||||||||  ||||||||||||||||||    
T  38796134 gaattacagactcaaatataaaaaaaaacattacaaatgttccgaaatcataaacaattgatctaatactcc 38796205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 17199481 - 17199549
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| |||||||||||||||| | |||||| ||| |||| || || ||||| | |||||||||||    
T  17199481 gaattacagactcaaatatagaaaacattacaaaagttctgaagtcgtatgcaatcgttctaatactcc 17199549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 22627122 - 22627186
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattcct 91  Q
    ||||||||||| || ||||||||  ||| ||||||||| | |||||||||||||| | |||||||    
T  22627122 tttctttgcctctttaggtgttttcttctatgtaagatatcttggaacttgggaaaaaaattcct 22627186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 28918143 - 28918211
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| ||||| |||||||||| | |||||| |||   | |||||||||||||| |||||||||||    
T  28918143 gaattacagactcatatatagaaaacattacaaaagttcgaatatcataggcaattgttctaatactcc 28918211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 29144523 - 29144571
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt 197  Q
    |||||| |||||||| |||||||||| |||| ||| |||||||||||||    
T  29144523 atttgcatgatttctccgtgaattacttcaaaaaccccctaaaattgtt 29144571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 9898107 - 9897941
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    |||||||||| |||||||| || | || |||||||||  ||||||||||||||||||||||||||||||||||||||||   ||||||| ||||||   |    
T  9898107 cacataaatcatcagatgtattgcctttcctgatttgtatgatttcttcgtgaattacatcaagaacaccctaaaattgctatgtttcaagaagaataca 9898008  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| |||||||||||||||| ||||||||||||  ||||||||| | ||||||||||| |||||    
T  9898007 attacagactcaaatatagaaaacaatacaaatgttccgaaatcataagtaattgatctaacactcc 9897941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 22569713 - 22569877
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgtttcaggaagaacggaat 216  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| | | ||||| |||||||||| | | || |||||||  ||||    
T  22569713 cacataaatcttcggatgtcttggtttgcctgatttgcttgatttcttcgtgaattacttaaggaacatcctaaaattgctatgtcgggaagaatagaat 22569812  T
Q  217 tacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||| | |||||||||||||| | || ||||||   ||||||||||| |||||||||||||||||    
T  22569813 tacataatcaaatatagaaaacattaaaaatgtctcgaaatcataggaaattgatctaatactcc 22569877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 23644557 - 23644391
Alignment:
Q  117 cacataaatcttcagatgtcttt-ctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacgg 213  Q
    ||||||||||||  ||||||||| ||||||  ||||||| |||||||||||||||||||||||| |||| |||||| ||| |  |||| ||||||||| |    
T  23644557 cacataaatcttaggatgtctttactttgcg-gatttgcatgatttcttcgtgaattacatcaaaaacatcctaaatttgctatgttttaggaagaacag 23644459  T
Q  214 aattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || |||| |||||||||||||||| | |||||||||   |||||||||||||||||||||||||||||    
T  23644458 aaatacagactcaaatatagaaaacattacaaatgtcccgaaatcataggcaattgatctaatactcc 23644391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 22564758 - 22564623
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||| |  |||||  ||||||| |||||||| |||||||||||||||| | |||||    
T  22564758 gatttgcatgatttcttcgtgaattacatcaacaacaccctaaaattgctatgtttcgagaagaacagaattacagactcaaatatagaaaacattacaa 22564659  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||   ||||||| ||||||||| |||||||||||    
T  22564658 atgtcccgaaatcacaggcaattgctctaatactcc 22564623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 117 - 280
Target Start/End: Original strand, 19246134 - 19246298
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| | |||||| ||| |||||||||||||| |   |||||   ||||||   |    
T  19246134 cacataaatcttcagatgtcttgctt-gcctgatttgcttgatttcttcattaattacctcatgaacaccctaaaatagccatgttttgagaagaatcaa 19246232  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    |||||| |||||||||||||||| |||||||||||    |||||||| ||||||||||||||||||    
T  19246233 attacagactcaaatatagaaaataatacaaatgtcccaaaatcataagcaattgatctaatactc 19246298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 15600653 - 15600488
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||| |||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||||||||   ||| |  |||||||   |    
T  15600653 cacataaatcttcggatgtcttgctttgcctgatttgcataatttcttcgtgaattacatcaaaaacaccctaaaattgctatgtattgggaagaaaata 15600554  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||  || |||||| |||||| || ||||||   ||||| ||||| |||||||||||||||||    
T  15600553 attacaagttcgaatata-aaaagagtataaatgtatcgaaattataggaaattgatctaatactcc 15600488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 279
Target Start/End: Complemental strand, 9339211 - 9339054
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattac 219  Q
    ||||||||||||||||| ||||||  ||||||  |||||||||| ||||||||||||| || |||||||||||| |  ||||| | |||||  |||||||    
T  9339211 aaatcttcagatgtcttgctttgca-gatttgaatgatttcttcatgaattacatcaa-aataccctaaaattgctatgtttcggaaagaatagaattac 9339114  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    |||||||||||||||||| | |||||||||    |||||||| ||||||| |||||||||    
T  9339113 aaactcaaatatagaaaacattacaaatgtccccaaatcataagcaattgctctaatact 9339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 20080595 - 20080759
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacgga 214  Q
    ||||||||| |||||||||||| |||| || ||||| | ||||||||| ||||||||||||||||| |||||||||||    |||||| |||||||  ||    
T  20080595 cacataaatattcagatgtcttgcttttcc-gatttacatgatttctttgtgaattacatcaagaagaccctaaaatttctatgtttcgggaagaataga 20080693  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| ||||||||||| || | |||| ||||| |   | ||||||||||||||||||||||||||    
T  20080694 attacagactcaaatataaaatacaatataaatg-tcccatatcataggcaattgatctaatactcc 20080759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 280
Target Start/End: Original strand, 2588193 - 2588318
Alignment:
Q  157 gatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatga 254  Q
    ||||||||||||||||||||||| ||||||| | |||||   |||||  |||||||  |||||||| |||||||||||||||| | ||||||||| | ||    
T  2588193 gatttcttcgtgaattacatcaaaaacacccaagaattgccatgttttgggaagaatagaattacagactcaaatatagaaaacattacaaatgtcacga 2588292  T
Q  255 aatcataggcaattgatctaatactc 280  Q
    |||||||| |||||| ||||||||||    
T  2588293 aatcatagacaattgttctaatactc 2588318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 281
Target Start/End: Complemental strand, 9507503 - 9507344
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattaca 220  Q
    ||||||||||||| ||  |||||| |||||   |||||||||||||||||||||||| ||||||||| ||||| |  || || |||| ||  ||||||||    
T  9507503 aatcttcagatgttttgatttgcc-gatttttatgatttcttcgtgaattacatcaaaaacaccctataattgctatgtctcgggaataatagaattaca 9507405  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     |||||||||||||||| | |||||||||   ||||||||| ||||||| |||||||||||    
T  9507404 tactcaaatatagaaaatattacaaatgtcccgaaatcataagcaattgttctaatactcc 9507344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 9898233 - 9898139
Alignment:
Q  23 ctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||||||| ||||||  ||||||||  ||||||||||||||| |||||||||| ||||| ||||||||||||||| || |||| |||||||||    
T  9898233 ctgttttcttcgcctttataggtgtttgcttcaatgtaagatgtcttggaacttgagaataaaattccttcctttgtaaattcttctgaggcctc 9898139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 281
Target Start/End: Complemental strand, 21079953 - 21079795
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacggaattaca 220  Q
    |||||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||| |||||| |||||||    ||| || | || ||  ||||||||    
T  21079953 aatcttcagatgtcttgctttgcc-gatttgcatgatttcttcttgaattacatcaa-aacaccataaaatttctatgtatcggaaataatagaattaca 21079856  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     |||||||||||||||| | | |||||||    |||||||| |||||||||||||||||||    
T  21079855 gactcaaatatagaaaacattgcaaatgtccaaaaatcatatgcaattgatctaatactcc 21079795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 8038285 - 8038124
Alignment:
Q  122 aaatcttcagatgtcttt-ctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaatta 218  Q
    |||||||| ||||| ||| ||||||| ||||||| |||||||||||| |||||| |||| |||||||||||||||   |||||  ||||||   |||||     
T  8038285 aaatcttcggatgtttttgctttgcc-gatttgcatgatttcttcgtaaattacttcaaaaacaccctaaaattgctatgttttgggaagactagaattg 8038187  T
Q  219 caaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    || |||||||||||||||| | || ||||||  |||||||||||||| ||  |||||||||||    
T  8038186 cagactcaaatatagaaaacattataaatgtcttgaaatcataggcagtttctctaatactcc 8038124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 249
Target Start/End: Complemental strand, 21687368 - 21687235
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacgga 214  Q
    ||||||||||||| |||  ||| ||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||    | ||||  ||||||  ||    
T  21687368 cacataaatcttcggataccttgctttgcctgttttgcttgatttcttcgt-aattagatcaagaacaccctaaaatttctatatttctagaagaataga 21687270  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgt 249  Q
    ||| || ||||| |||||||||| |||||||||||    
T  21687269 attgcatactcatatatagaaaacaatacaaatgt 21687235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 24389386 - 24389221
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacgga 214  Q
    |||||||||||||| ||||||| ||||  | ||||| | |||||||||  |||||||||||||||| |||||||||||  |  ||||   ||||||  ||    
T  24389386 cacataaatcttcatatgtcttgctttttc-gatttacatgatttctttatgaattacatcaagaagaccctaaaatttctatgttttcagaagaataga 24389288  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||| | | |||||||||||||| |||| ||||||   |||||||||||||||| ||||||||||||    
T  24389287 attagagagtcaaatatagaaaacaatataaatgtcccgaaatcataggcaattaatctaatactcc 24389221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 27961084 - 27961175
Alignment:
Q  129 cagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattaca 220  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| |||||   |||||| ||||||| |||||||||    
T  27961084 cagatgtctttctttgcc-gatttgcatgatttcttcgtgaattacatcaa-aacaccctagaattgctatgtttcgggaagaatggaattaca 27961175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 19594186 - 19594050
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| | | ||||||||||||  |||||| |||| |   |||||||| |||||||||||||||| | |||||    
T  19594186 gatttgcatgatttcttcgtgaattacttcaaaacctccctaaaattgttatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaa 19594087  T
Q  246 atgt-tatgaaatcataggcaattgatctaatactcc 281  Q
    | ||   | |||||||||||||||| |||||||||||    
T  19594086 aagtccgtaaaatcataggcaattgttctaatactcc 19594050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 281
Target Start/End: Complemental strand, 21060636 - 21060478
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattaca 220  Q
    |||||||||||||||| |||| ||  |||| | |||||||||| ||||||||||||| |||||| |||||||| |  || |||| || ||  |||||| |    
T  21060636 aatcttcagatgtcttgctttccca-atttacatgatttcttcttgaattacatcaa-aacaccgtaaaattgctatgtatcagaaataatagaattata 21060539  T
Q  221 aactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||||||||||||||| | || ||||||    |||||||| |||||||||||||||||||    
T  21060538 aactcaaatatagaaaacattaaaaatgtccaaaaatcatatgcaattgatctaatactcc 21060478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 13216514 - 13216379
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||| | |||||||||||| ||||||||| ||||| |  |||||||||||||  ||||||||||| |||||||| |||| | ||  |    
T  13216514 gatttgcatgatttctttgcgaattacatcaaaaacaccctagaattgctaagtttcaggaagaatagaattacaaacgcaaatataaaaaacattatca 13216415  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||  ||||| ||| |||| || |||||||||||    
T  13216414 atgtttcgaaattataagcaaatgttctaatactcc 13216379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 281
Target Start/End: Original strand, 14076285 - 14076419
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaa 246  Q
    |||||| ||||||||||||||||||| |||| |||  |||||||||| |  ||||| |||| ||  ||||||   |||||||||||||||| | ||||||    
T  14076285 atttgcatgatttcttcgtgaattacttcaaaaactacctaaaattgctatgtttcgggaaaaatagaattagggactcaaatatagaaaacattacaaa 14076384  T
Q  247 tgttatgaaatcataggcaattgatctaatactcc 281  Q
     ||  |||||||||||||||||  |||||||||||    
T  14076385 agtcctgaaatcataggcaatttctctaatactcc 14076419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 281
Target Start/End: Original strand, 24469684 - 24469821
Alignment:
Q  146 ctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatac 243  Q
    ||||||| | ||||||||||||||||||| |||| ||| ||||||||||||  |||||| |||| |    ||||||| ||||| |||||||||| | |||    
T  24469684 ctgattttcatgatttcttcgtgaattacttcaaaaactccctaaaattgttatgtttcgggaaaactataattacagactcatatatagaaaatattac 24469783  T
Q  244 aaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||| ||   ||||||||||||||| | |||||||||||    
T  24469784 aaaagtcccgaaatcataggcaatcgttctaatactcc 24469821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 281
Target Start/End: Original strand, 9519618 - 9519755
Alignment:
Q  146 ctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatac 243  Q
    ||||||||| |||||||| |||||||||  |||| |||||||||||||||  || |||| |||| |   |||||||| |||||||||||||| | | |||    
T  9519618 ctgatttgcatgatttctccgtgaattatttcaaaaacaccctaaaattgcgttatttcgggaaaactagaattacagactcaaatatagaacacattac 9519717  T
Q  244 aaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||| |     |||||||||||||||| |||||||||||    
T  9519718 aaaagccccaaaatcataggcaattgctctaatactcc 9519755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 3358003 - 3358121
Alignment:
Q  119 cataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaat 216  Q
    |||||||||| ||||||||||||||||| ||||||| ||||||||||  ||||||| |||| |||||| ||| ||||   |||||| | |||||   |||    
T  3358003 cataaatctttagatgtctttctttgcc-gatttgcatgatttcttcacgaattacgtcaa-aacaccataatattgctatgtttcggaaagaaaataat 3358100  T
Q  217 tacaaactcaaatatagaaaa 237  Q
    |||| ||||||||||||||||    
T  3358101 tacagactcaaatatagaaaa 3358121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 10822005 - 10822062
Alignment:
Q  59 taagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcct 116  Q
    |||||||| |||| ||||||||| ||||||||||||||||| | ||||||||||||||    
T  10822005 taagatgtcttgggacttgggaacataattccttcctttgtaatgtcttttgaggcct 10822062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 31879012 - 31878931
Alignment:
Q  197 tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatg-aaatcataggcaattgatctaata 277  Q
    |||||||| |||||  ||||||||||||||||||||||||| | |||||||||   | ||||||||| ||||||||||||||    
T  31879012 tgtttcagaaagaatagaattacaaactcaaatatagaaaacattacaaatgtcccgaaaatcatagacaattgatctaata 31878931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 8246552 - 8246636
Alignment:
Q  197 tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| |||||||   ||||||| |||||||||||||||| |||| ||||||    ||||||||| ||||||||||||||||||    
T  8246552 tgtttcgggaagaatataattacagactcaaatatagaaaacaataaaaatgtcccaaaatcatagacaattgatctaatactcc 8246636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 22569585 - 22569653
Alignment:
Q  20 tgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataatt 88  Q
    ||||||||||||| || | || ||||||||  ||||||||||||||| |||||||||||||| ||||||    
T  22569585 tgcctgttttcttcgcatgttgaggtgttttcttcaatgtaagatgtcttggaacttgggaacataatt 22569653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 6629125 - 6629050
Alignment:
Q  204 ggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatact 279  Q
    |||||||  |||||||| |||||||||||||||| | ||||||| |  ||||| ||| ||||||||||||||||||    
T  6629125 ggaagaatagaattacagactcaaatatagaaaacattacaaatatcctgaaaccattggcaattgatctaatact 6629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 280
Target Start/End: Original strand, 8066540 - 8066674
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| |||||||||| |||||||| |||| | | || |||||||  |  |||||||||| |   |||||||| |||||||||||||||| | |||||    
T  8066540 gatttgcatgatttcttcttgaattacttcaaaacccccgtaaaattactatgtttcaggaaaacttgaattacagactcaaatatagaaaatattacaa 8066639  T
Q  246 atgttatgaaatcataggcaattgatctaatactc 280  Q
    | |||  |||||||||| |||||  ||||||||||    
T  8066640 aagttccgaaatcatagacaattattctaatactc 8066674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 9840914 - 9840961
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    ||||||||||||||||||||||||||| | || |||||||||||||||    
T  9840914 gatttgcttgatttcttcgtgaattactttaaaaacaccctaaaattg 9840961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 14723571 - 14723672
Alignment:
Q  146 ctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatac 243  Q
    ||||||||| ||||||||||||||||||| |||| ||| |||||||||||   |||||||| || |   |||||||| |||||||||||||||| | |||    
T  14723571 ctgatttgcatgatttcttcgtgaattacttcaaaaac-ccctaaaattgctatgtttcagaaaaactagaattacagactcaaatatagaaaacattac 14723669  T
Q  244 aaa 246  Q
    |||    
T  14723670 aaa 14723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 20004389 - 20004268
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaac-ggaattacaaactcaaatatagaaaagaataca 244  Q
    ||||||| ||||||||||||||||| | |||| ||| |||||||||||||  ||||| |||| |||  |||||||| ||||||||||| |||| | ||||    
T  20004389 gatttgcatgatttcttcgtgaatttcttcaaaaactccctaaaattgttgcgtttc-ggaaaaactagaattacagactcaaatataaaaaatattaca 20004291  T
Q  245 aatgttatgaaatcataggcaat 267  Q
    || ||  | ||||||||||||||    
T  20004290 aaagtcttaaaatcataggcaat 20004268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 24388214 - 24388050
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacgga 214  Q
    |||||||||||| | ||||||| |||| | |||||| |  |||||||| ||||||| ||||||||| || ||||||||  |  ||||| | |||||  ||    
T  24388214 cacataaatcttgatatgtcttgcttttc-tgatttacacgatttctttgtgaattgcatcaagaagactctaaaatttatatgtttccgaaagaataga 24388116  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||| | | |||||||||||||| | || ||||||   ||||||||||| |||||||||||||||||    
T  24388115 attagagagtcaaatatagaaaaca-tataaatgtcccgaaatcataggaaattgatctaatactcc 24388050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 8246366 - 8246452
Alignment:
Q  31 tttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||||||| |||||||| ||||||||| | |||| |||||||||||||| ||||||  | ||| ||| |||||||  ||||||||    
T  8246366 tttgccttttgaggtgtttttttcaatgtgaaatgtcttggaacttgggaacataatttgtccctctgtaaagtcttccgaggcctc 8246452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 281
Target Start/End: Complemental strand, 22404464 - 22404328
Alignment:
Q  146 ctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatac 243  Q
    ||||||||| |||||||||| |||||||| | || ||| ||||||||||| |  |||||||||| | | |||||||| |||| ||||||||||| | |||    
T  22404464 ctgatttgcatgatttcttcatgaattacttaaa-aaccccctaaaattggtatgtttcaggaaaaccagaattacatactcgaatatagaaaacattac 22404366  T
Q  244 aaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||| ||   |||||||||| |||| | | |||||||||    
T  22404365 aaaagtcccgaaatcatagacaatcgttttaatactcc 22404328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 32759835 - 32759888
Alignment:
Q  125 tcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaa 179  Q
    |||||||||||||| | ||||| ||||||| ||||||||||||||||||||||||    
T  32759835 tcttcagatgtcttacattgcc-gatttgcatgatttcttcgtgaattacatcaa 32759888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 21687506 - 21687426
Alignment:
Q  10 ggtggtgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattcct 91  Q
    |||| |||||||||||||| ||||||||||| || |||||  || |||||| ||||| |||||| ||||||| |||||||||    
T  21687506 ggtgttgaaatgcctgttt-ctttgccttttgagatgttttctttaatgtaggatgtcttggaaattgggaacataattcct 21687426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 10505039 - 10505090
Alignment:
Q  127 ttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaa 179  Q
    ||||||||||||  |||||| ||||||| ||||||||||||||||||||||||    
T  10505039 ttcagatgtcttgttttgcc-gatttgcatgatttcttcgtgaattacatcaa 10505090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 21932429 - 21932497
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| |||||||||||||||| | |||||||||  | ||||||||| |||||  |||||||||||    
T  21932429 gaattacagactcaaatatagaaaacattacaaatgtcctaaaatcatagacaatttctctaatactcc 21932497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 23005455 - 23005320
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| |||||||||||||||| || |||| | | |||| ||||||  ||||||  |||| |   |||||||| |||||||||| ||||| | |||||    
T  23005455 gatttgcatgatttcttcgtgaataacttcaaaatccccctcaaattgctttgttttgggaaaactagaattacatactcaaatatggaaaacattacaa 23005356  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||   ||||||||||||||| | |||||| ||||    
T  23005355 atgtcccgaaatcataggcaatcgttctaatgctcc 23005320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 23782911 - 23783046
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| |||||||||||||||| || |||| | | |||| ||||||  ||||||  |||| |   |||||||| |||||||||| ||||| | |||||    
T  23782911 gatttgcatgatttcttcgtgaataacttcaaaatccccctcaaattgctttgttttgggaaaactagaattacatactcaaatatggaaaacattacaa 23783010  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||   ||||||||||||||| | |||||| ||||    
T  23783011 atgtcccgaaatcataggcaatcgttctaatgctcc 23783046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 1636522 - 1636569
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    ||||||| ||||||||||||||||||| |||| ||| |||||||||||    
T  1636522 gatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattg 1636569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 24479910 - 24479961
Alignment:
Q  146 ctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt 197  Q
    ||||||||| |||||| |||||||||||| |||| ||| |||||||||||||    
T  24479910 ctgatttgcatgattttttcgtgaattacttcaaaaaccccctaaaattgtt 24479961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 6629287 - 6629245
Alignment:
Q  75 ttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||    
T  6629287 ttgggaatataattcctccctttgtaaagtcttctgaggcctc 6629245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 8246484 - 8246537
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaa 170  Q
    |||||||||||||  ||||||| ||||  ||||||||||||||||||| |||||    
T  8246484 cacataaatcttcgaatgtcttgctttaactgatttgcttgatttctttgtgaa 8246537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 20404219 - 20404171
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt 197  Q
    ||||||| |||||||||||||||||||||||| |||| | ||||||||||    
T  20404219 gatttgcatgatttcttcgtgaattacatcaa-aacatcataaaattgtt 20404171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 3357914 - 3357966
Alignment:
Q  63 atgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcc 115  Q
    |||| |||||||||||||| | ||||||| ||||||| | |||||||||||||    
T  3357914 atgtcttggaacttgggaacaaaattcctccctttgtaatgtcttttgaggcc 3357966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 14077992 - 14078060
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| | ||||||||||| |||| | |||||| ||   ||||||||||||||||| |||||||||||    
T  14077992 gaattagagactcaaatataaaaaacattacaaaagtcccgaaatcataggcaattgctctaatactcc 14078060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 14641587 - 14641655
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| |||||| ||||||||| | |||||| |||   |||||||||| ||||| |||||||||||    
T  14641587 gaattacagactcaattatagaaaacattacaaaagttccaaaatcataggtaattgttctaatactcc 14641655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 30356131 - 30356182
Alignment:
Q  127 ttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaa 179  Q
    |||| ||||||| ||||||| ||||||| |||||||| |||||||||||||||    
T  30356131 ttcatatgtcttgctttgcc-gatttgcatgatttctccgtgaattacatcaa 30356182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 8e-33; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 17134949 - 17135115
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||| ||| | || |||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||   |||||| |||| ||  ||    
T  17134949 cacataaatcttcggatattttgctttacccgattttcttgatttcttcgtgaattacatcaagaacacccttaaattgctatgtttcgggaataataga 17135048  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| |||||||||||||||| |||||||||||   |||||||||| ||||| || |||||||||    
T  17135049 attacatactcaaatatagaaaacaatacaaatgtccggaaatcatagacaattaatataatactcc 17135115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 277
Target Start/End: Complemental strand, 20891882 - 20891723
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    |||||||||||||  |||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||   |||||  |||| ||        
T  20891882 cacataaatcttcgaatgtcttgttttgcctaatttgcttgatttcttcgtgaattacctcaagaacaccctaaaattgctatgttttgggaataa---t 20891786  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaata 277  Q
    || ||| ||||||| |||||||| |||||||||||   || |||||||||||||||| |||||    
T  20891785 ataacatactcaaacatagaaaacaatacaaatgtcccgatatcataggcaattgatataata 20891723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 18535671 - 18535793
Alignment:
Q  161 tcttcgtgaattacatcaagaacaccctaaaattgttgt--ttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaaatc 258  Q
    |||||||||||||||||||||||||||||||||| || |  ||| |||| ||  |||||| | |||| ||||||||||| |||||||||||   ||||||    
T  18535671 tcttcgtgaattacatcaagaacaccctaaaatttttatacttcgggaataatagaattatagactcgaatatagaaaacaatacaaatgtcccgaaatc 18535770  T
Q  259 ataggcaattgatctaatactcc 281  Q
    ||| |||||||||||||||||||    
T  18535771 ataagcaattgatctaatactcc 18535793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 281
Target Start/End: Complemental strand, 3114947 - 3114783
Alignment:
Q  118 acataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaa 215  Q
    ||||||||||||| ||||||| ||||| | ||||||| |||||||||||||||| |||||||||||||||||||||||   |||||| |||| |     |    
T  3114947 acataaatcttcatatgtcttgctttgtc-gatttgcatgatttcttcgtgaataacatcaagaacaccctaaaattgctatgtttcgggaaaattctga 3114849  T
Q  216 ttacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||| |||||||||||||||||| | | ||||| |   ||||||||||||||||  |||||||||||    
T  3114848 ttaaaaactcaaatatagaaaacatttcaaatatctcgaaatcataggcaattactctaatactcc 3114783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 281
Target Start/End: Complemental strand, 13906820 - 13906657
Alignment:
Q  119 cataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaatt-acatcaagaacaccctaaaattgtt--gtttcaggaagaacggaa 215  Q
    |||||| |||||||||||||  |||||| ||| ||| ||||||||| ||||||| ||| ||| |||| |||||||||| |  ||||| |||||||  |||    
T  13906820 cataaaccttcagatgtcttagtttgcc-gatatgcatgatttctttgtgaatttacaacaa-aacatcctaaaattgctatgtttcgggaagaatagaa 13906723  T
Q  216 ttacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||| |||||||||||||||| | |||||||||   ||||||||| |||||||||||||||||||    
T  13906722 ttacagactcaaatatagaaaacattacaaatgtcccgaaatcataagcaattgatctaatactcc 13906657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 268
Target Start/End: Complemental strand, 18735509 - 18735357
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||| |||||||| | |||| |||||||| ||||||||| ||||||||||||||||||| ||||||||||   |||| |  ||||||   |    
T  18735509 cacataaatcttcggatgtcttgcattgc-tgatttgcatgatttctttgtgaattacatcaagaacaacctaaaattgctatgttccgagaagaatata 18735411  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaatt 268  Q
    |||||| ||| |||||||||||| |||||||||||   |||||||||| |||||    
T  18735410 attacagactgaaatatagaaaacaatacaaatgtcccgaaatcatagacaatt 18735357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 19388089 - 19387958
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||  |||||||| |||| || ||||||  ||||||||||||||||||||||||||||||| ||||||||   |||||  |||||||  ||    
T  19388089 cacataaatctttggatgtcttgctttccc-gatttgaatgatttcttcgtgaattacatcaagaacaccataaaattgatatgttttgggaagaataga 19387991  T
Q  215 attacaaactcaaatatagaaaagaatacaaat 247  Q
    |||||| |||||||||||||||| |||| ||||    
T  19387990 attacagactcaaatatagaaaacaatataaat 19387958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 22246893 - 22247020
Alignment:
Q  156 tgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatg 253  Q
    |||||||||||||||||||||||| |||| |||||||||    ||||| ||||||||| |||||||| ||| |||||||||||| | |||||||||        
T  22246893 tgatttcttcgtgaattacatcaaaaacatcctaaaatttctatgttttaggaagaacagaattacagacttaaatatagaaaacattacaaatgtccca 22246992  T
Q  254 aaatcataggcaattgatctaatactcc 281  Q
    ||||||||| |||||| |||||||||||    
T  22246993 aaatcatagtcaattgctctaatactcc 22247020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 22470644 - 22470476
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgt-gaattacatcaagaacac--cctaaaattgtt--gtttcaggaagaac 211  Q
    ||||||||||||| ||||||||  ||||| |||||||| ||||||||| || ||||||||| || || ||  |||||||||| |  |||||| |||||||    
T  22470644 cacataaatcttcggatgtcttgttttgc-tgatttgcatgatttctttgttgaattacattaaaaaaacatcctaaaattgctatgtttcacgaagaac 22470546  T
Q  212 ggaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
     |||||||| ||||||||||| |||| | ||||||||| | ||||||||| ||||||| ||||| |||||    
T  22470545 agaattacagactcaaatataaaaaacattacaaatgtcacgaaatcatatgcaattgctctaacactcc 22470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 20886732 - 20886859
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattac 219  Q
    ||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||||||| ||| || ||||||||   |||||| |||||||  ||||||     
T  20886732 aaatcttcatatgtcttgctttgcc-gatttgcatgatttcttcgtgaattacatcaa-aacgccttaaaattgccatgtttcgggaagaatagaattat 20886829  T
Q  220 aaactcaaatatagaaaagaatacaaatgt 249  Q
    | |||||||||||||||| || ||||||||    
T  20886830 agactcaaatatagaaaacaaaacaaatgt 20886859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 5509927 - 5510092
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||  |||||||| |||| || ||||||| ||||||||||||||||||||||||||||| ||||||||||   |||||| |||| |         
T  5509927 cacataaatcttgggatgtcttgcttttcc-gatttgcatgatttcttcgtgaattacatcaagaacatcctaaaattgctatgtttcgggaaaactctg 5510025  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||| | |||||||||||||||| | |||||||||  |||||| ||||| ||||  | |||||||||    
T  5510026 attatagactcaaatatagaaaacattacaaatgtcctgaaattataggaaattactttaatactcc 5510092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 22470778 - 22470677
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggc 114  Q
    |||||| | ||||||||| ||||||| ||||||||  |||  |||||||||| || ||||||||||| | ||||||| ||||||||||||||| ||||||    
T  22470778 tgaaatccatgttttcttcgcctttttaggtgtttgcttctttgtaagatgtcttcgaacttgggaacaaaattcctccctttgtgaagtcttctgaggc 22470679  T
Q  115 ct 116  Q
    ||    
T  22470678 ct 22470677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 280
Target Start/End: Complemental strand, 31284125 - 31283978
Alignment:
Q  135 tctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatat- 231  Q
    |||| ||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||   |||||  |||| ||  |||||||| ||||||||||     
T  31284125 tcttgctttgcc-gatttgcatgatttcttcgtcaattacatcaaaaacaccctaaaattgctatgttttgggaataatagaattacagactcaaatata 31284027  T
Q  232 agaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    | |||| | |||||||||   ||||||||| ||||||| ||||||||||    
T  31284026 aaaaaacattacaaatgtcccgaaatcataagcaattgctctaatactc 31283978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 8448690 - 8448825
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||| | || | ||||||||| |||||||||||||||   |||||| | ||||||  || ||||||||||||||||||||| | |||||    
T  8448690 gatttgcatgatttcgttgttagttacatcaaaaacaccctaaaattgccatgtttcggtaagaacaaaaatacaaactcaaatatagaaaacattacaa 8448789  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    || |   ||||||||||||||||| | |||||||||    
T  8448790 atatctcgaaatcataggcaattgctataatactcc 8448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 16223387 - 16223514
Alignment:
Q  156 tgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatg 253  Q
    |||||||||||||||||||||||||||||||||||||||    |||||| |||| |    ||||||| |||||||||||||||| | || ||||||  |     
T  16223387 tgatttcttcgtgaattacatcaagaacaccctaaaatttctatgtttcgggaaaactctaattacatactcaaatatagaaaacattataaatgtccta 16223486  T
Q  254 aaatcataggcaattgatctaatactcc 281  Q
    |||||||||| ||||  |||||||||||    
T  16223487 aaatcataggaaatttctctaatactcc 16223514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 27073840 - 27073975
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||| | ||||||||| |  ||||| |||| |   |||||||| |||||||||||||||| | |||||    
T  27073840 gatttgcatgatttcttcgtgaattacttcaaaaacccgctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaa 27073939  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    |  ||  ||||||||||| ||||| |||||||||||    
T  27073940 aatttccgaaatcatagggaattgttctaatactcc 27073975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 8765570 - 8765697
Alignment:
Q  156 tgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatg 253  Q
    ||||||||||||||||||| |||| ||| ||||||||||| |  |||||| ||| |   |||||||| |||||||||||||||| | |||||| ||   |    
T  8765570 tgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcaagaaaactagaattacagactcaaatatagaaaacattacaaaagtcccg 8765669  T
Q  254 aaatcataggcaattgatctaatactcc 281  Q
    |||||||||| ||| | |||||||||||    
T  8765670 aaatcataggaaatcgttctaatactcc 8765697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 14977694 - 14977829
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| | | |||||||| || |  ||||| |||| |   |||||||| |||||||||||||||| | |||||    
T  14977694 gatttgcatgatttcttcgtgaattacttcaaaacccccctaaaaatgctatgtttcgggaaaactagaattacatactcaaatatagaaaacattacaa 14977793  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||   ||||||||||||||||| | |||||||||    
T  14977794 aagtcccgaaatcataggcaattgttataatactcc 14977829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 19533676 - 19533802
Alignment:
Q  154 cttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgtta 251  Q
    ||||||||||||||||||||| |||| ||| |||| |||||| |  ||||| |||| |   |||||||| |||||||||||||||| | |||||| ||      
T  19533676 cttgatttcttcgtgaattacttcaaaaaccccctcaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaaaagtct 19533775  T
Q  252 tgaaatcataggcaattgatctaatac 278  Q
     ||||||||||||||| | ||||||||    
T  19533776 cgaaatcataggcaatcgttctaatac 19533802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 280
Target Start/End: Complemental strand, 28326364 - 28326209
Alignment:
Q  125 tcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaat--tgttgtttcaggaagaacggaattacaaa 222  Q
    |||||||||||||| | ||||| ||||||| |||||||||||| ||||||||||| |||||||||||||     |||||| |||||||  ||||  || |    
T  28326364 tcttcagatgtcttgcattgcc-gatttgcatgatttcttcgtcaattacatcaa-aacaccctaaaataactatgtttcgggaagaatagaatcgcaga 28326267  T
Q  223 ctcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactc 280  Q
    |||||||| |||||| | | |||||||   ||||||||| ||||||  ||||||||||    
T  28326266 ctcaaatacagaaaacattccaaatgtcccgaaatcataagcaatttctctaatactc 28326209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 278
Target Start/End: Complemental strand, 19573776 - 19573652
Alignment:
Q  156 tgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatg 253  Q
    ||||||||||||||||||| |||| ||| |||| ||||||   ||||||||||| |    |||||||||||||||| ||||||  | ||||||  |  ||    
T  19573776 tgatttcttcgtgaattacttcaaaaaccccctcaaattgctatgtttcaggaaaactaaaattacaaactcaaatgtagaaagcattacaaaaatcctg 19573677  T
Q  254 aaatcataggcaattgatctaatac 278  Q
    |||||||||||||||| ||||||||    
T  19573676 aaatcataggcaattgttctaatac 19573652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 8145136 - 8145271
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| |||||| |||||||||||  |||| ||| ||||||||||| |  ||||| |||| |    ||||||| |||||||||||||||| | |||||    
T  8145136 gatttgcatgatttgttcgtgaattatttcaaaaaccccctaaaattgctatgtttcgggaaaactataattacatactcaaatatagaaaacattacaa 8145235  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||   ||||||||||||||||| | |||||||||    
T  8145236 aagtcccgaaatcataggcaattgttttaatactcc 8145271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 8770519 - 8770587
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||||||||||||||||||||||| | |||||| |||  ||||||||||| ||| | |||||||||||    
T  8770519 gaattacaaactcaaatatagaaaacattacaaaagttccgaaatcataggaaatcgttctaatactcc 8770587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 18735641 - 18735545
Alignment:
Q  17 aaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgagg 113  Q
    |||||||| ||||||| |||| || ||  ||||  ||||||||||||||| |||||||||||||| | ||||||| ||| ||| ||||||| |||||    
T  18735641 aaatgcctattttcttcgcctgtttagtggtttgcttcaatgtaagatgtcttggaacttgggaacagaattcctccctctgtaaagtcttctgagg 18735545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 27412801 - 27412733
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| |||||||||||||||| | |||||| |||  ||||||||||||||||| | |||||||||    
T  27412801 gaattacagactcaaatatagaaaacattacaaaagttccgaaatcataggcaattgttttaatactcc 27412733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 8448521 - 8448627
Alignment:
Q  10 ggtggtgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtctttt 109  Q
    |||| |||||||| ||||| ||||||||||| ||||||||  ||    ||| | ||| |||||||||||||| | ||||||||| ||||| |||||||||    
T  8448521 ggtgctgaaatgcttgttt-ctttgcctttttaggtgtttgcttttgcgtatgttgtcttggaacttgggaaaagaattccttcgtttgtaaagtctttt 8448619  T
Q  110 gaggcctc 117  Q
    ||||||||    
T  8448620 gaggcctc 8448627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 20886605 - 20886695
Alignment:
Q  27 tttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||||| ||||| ||||||||  ||| || |||||||| |||||||||||||||| ||||  | ||||||| | ||||| |||||||||    
T  20886605 tttctttgtctttttaggtgtttgcttccatataagatgtcttggaacttgggaataaaattaatccctttgtaatgtcttatgaggcctc 20886695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 3115045 - 3114980
Alignment:
Q  52 ttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    |||||||||| |||| |||||||||||||| ||||||||| ||| ||| | ||||| |||||||||    
T  3115045 ttcaatgtaaaatgtcttggaacttgggaacataattcctccctctgtaacgtcttctgaggcctc 3114980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 281
Target Start/End: Complemental strand, 18457321 - 18457185
Alignment:
Q  146 ctgatttgcttgatttcttcgtgaattacatcaagaacaccc-taaaattgt-tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatac 243  Q
    ||||||| | ||||||||||||||||||| |||| ||||||| ||||||||| |||||| ||||      || |||  |||||||||||||||| | |||    
T  18457321 ctgatttacatgatttcttcgtgaattacttcaa-aacacccctaaaattgtatgtttcgggaaagctaaaaatacctactcaaatatagaaaacattac 18457223  T
Q  244 aaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||| ||   ||||||||||||||||| |||||||||||    
T  18457222 aaaagtcccgaaatcataggcaattgttctaatactcc 18457185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 52936574 - 52936537
Alignment:
Q  157 gatttcttcgtgaattacatcaagaacaccctaaaatt 194  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  52936574 gattttttcgtgaattacatcaagaacaccctaaaatt 52936537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 281
Target Start/End: Original strand, 19912468 - 19912603
Alignment:
Q  149 atttgcttgatttcttcgtgaattacatcaagaacaccct-aaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    |||||| |||||||||| |||||||| |||| ||| |||| |||||||||  ||||| |||| |   ||||||||  ||||||||||||||| | |||||    
T  19912468 atttgcatgatttcttcatgaattacttcaaaaacccccttaaaattgttatgtttcgggaaaactagaattacagtctcaaatatagaaaacattacaa 19912567  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | ||| ||| ||||||  |||| | |||||||||||    
T  19912568 aagttctgatatcatacacaatcgttctaatactcc 19912603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 20431427 - 20431495
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||| |||||||| ||||||| | |||||| ||  |||||||||||||||| | |||||||||||    
T  20431427 gaattacatactcaaatttagaaaacattacaaaagtcctgaaatcataggcaatcgttctaatactcc 20431495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 22246736 - 22246819
Alignment:
Q  29 tctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgagg 113  Q
    ||||||||||||||| |||||  ||| ||||||||||| |||||| ||||||  | ||||||| | ||||| |||||||||||||    
T  22246736 tctttgccttttaag-tgtttgcttctatgtaagatgtcttggaatttgggagcagaattcctccttttgtaaagtcttttgagg 22246819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 23637477 - 23637547
Alignment:
Q  124 atcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    |||||||||||||||  |||| | ||||| | |||||| ||||||||||||||||| ||||||||| |||||    
T  23637477 atcttcagatgtcttgatttgtc-gatttccatgatttattcgtgaattacatcaaaaacaccctagaattg 23637547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 281
Target Start/End: Complemental strand, 19170341 - 19170215
Alignment:
Q  156 tgatttcttcgtgaattacatcaagaacaccctaaaattgttgttt-caggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatga 254  Q
    |||||| |||||||||||| |||| ||| || |||||||| | ||| |||||| |   |||||||||||| |||||||||||| | |||||| |||   |    
T  19170341 tgattttttcgtgaattacttcaaaaaccccttaaaattgctattttcaggaaaactagaattacaaacttaaatatagaaaacattacaaaggtttcca 19170242  T
Q  255 aatcataggcaattgatctaatactcc 281  Q
    |||| |||| ||||| | |||||||||    
T  19170241 aatcgtaggaaattgttttaatactcc 19170215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 19909239 - 19909191
Alignment:
Q  147 tgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    |||||||| ||||||||||||||||||  |||| ||| |||||||||||    
T  19909239 tgatttgcatgatttcttcgtgaattatttcaaaaaccccctaaaattg 19909191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 23054813 - 23054754
Alignment:
Q  119 cataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaa 179  Q
    ||||| |||| ||||||||| |||| || ||||| | ||||||||||||||||||||||||    
T  23054813 cataagtctttagatgtcttgcttttcc-gatttacatgatttcttcgtgaattacatcaa 23054754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 60; Significance: 1e-25; HSPs: 5)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 9349 - 9184
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||||| || |||||||||||||||||  ||||||||   | ||||||||||||  ||    
T  9349 cacataaatcttcggatgtcttgctttgcctgatttgctttatttctttgtaaattacatcaagaacactttaaaattgctatatttcaggaagaataga 9250  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    | || | |||||||||||||||  |||| ||||||    |||||||||| ||||||||||| |||||    
T  9249 a-tatagactcaaatatagaaagcaataaaaatgtcccaaaatcataggaaattgatctaaaactcc 9184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 277
Target Start/End: Complemental strand, 13714 - 13552
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacgga 214  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||   |||||  |||| |   ||    
T  13714 cacataaatcttcgaatgtcttgctttgtctgatttgcttgatttcttcgtaaattacatcaagaataccctaaaattgatgtgttttgggaatagtaga 13615  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaata 277  Q
    |||| | ||| |||||||||||  ||||||||||    ||||||||| | |||||||||||||    
T  13614 attatagactaaaatatagaaatcaatacaaatgacccgaaatcataagaaattgatctaata 13552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 5066 - 4946
Alignment:
Q  161 tcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaaatc 258  Q
    ||||||||||||||||||||||||||||||||||    |||||  |||| ||  |||||| | |||| ||||||||||| ||||||||||||   |||||    
T  5066 tcttcgtgaattacatcaagaacaccctaaaatttctatgttttgggaataatagaattatagactcgaatatagaaaacaatacaaatgttccaaaatc 4967  T
Q  259 ataggcaattgatctaatactcc 281  Q
    ||  |||||||||||||||||||    
T  4966 at--gcaattgatctaatactcc 4946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 5197 - 5106
Alignment:
Q  26 ttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    ||||||| |||| || ||||||||  ||||||||||||||| |||||||| ||||| | ||||||| ||| ||| ||||||| |||||||||    
T  5197 ttttcttcgcctcttgaggtgttttcttcaatgtaagatgtattggaactagggaaaaaaattcctccctctgtaaagtcttctgaggcctc 5106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 9475 - 9382
Alignment:
Q  24 tgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcctc 117  Q
    ||||||||| |||| || | ||||||  ||||||| ||||||| |||||||||||||| | |||| || ||| ||| || ||||||||||||||    
T  9475 tgttttcttcgcctgttgaagtgttttcttcaatgaaagatgtattggaacttgggaacaaaatttctccctctgtaaaatcttttgaggcctc 9382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 38179 - 38310
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaa-actcaaatatagaaaagaataca 244  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||  ||||| |||| ||  ||||||||  |||||||||||||||| | ||||    
T  38179 gatttgcgtgatttcttcgtgaattacatcaa-aacaccctaaaattgttatgtttcgggaaaaagagaattacatgactcaaatatagaaaacattaca 38277  T
Q  245 aatgttatgaaatcataggcaattgatctaata 277  Q
    |||||  |||||||||| ||||||| |||||||    
T  38278 aatgtcttgaaatcataagcaattgctctaata 38310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 244039 - 243904
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||| |  ||||| |||||||  |||||||| | |||||||||||||| | |||||    
T  244039 gatttgcatgatttctttgtgaattacatcaaaaacacactaaaattgctatgtttcgggaagaatagaattacatattcaaatatagaaaacattacaa 243940  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    || | ||||||| |||| |||||| |||||||||||    
T  243939 atatcatgaaataatagacaattgctctaatactcc 243904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 281
Target Start/End: Complemental strand, 88675 - 88510
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt--gttgtttcaggaagaacgga 214  Q
    |||||||||||||||||||||| | ||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||    |||| | | |||||   |    
T  88675 cacataaatcttcagatgtcttgcattgcc-gatttgcatgatttctttgtgaattacatcaagaacatcctaaaatttctatgttccggaaagaatata 88577  T
Q  215 attacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||| ||| |||||||||||| |||||||||||    ||||||||| |||||| ||||| |||||    
T  88576 attacagactgaaatatagaaaacaatacaaatgtcccaaaatcatagacaattgctctaagactcc 88510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 88807 - 88711
Alignment:
Q  17 aaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgagg 113  Q
    |||||||| ||||||| |||| || || |||||  ||||||||||||||| |||||||||||||| |||||| || ||| ||| ||||||| |||||    
T  88807 aaatgcctattttcttcgcctgtttagttgtttgcttcaatgtaagatgtcttggaacttgggaacataatttctccctctgtaaagtcttctgagg 88711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 182720 - 182585
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgttgt-ttcaggaagaac-ggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||| | |||||||| ||||||||||||||| ||  |||| |||  |||||||| |||||||||||||||| | |||||    
T  182720 gatttgcatgatttcttcgtgaatttcttcaagaactccctaaaattgttgtgtttcggaaaaactagaattacagactcaaatatagaaaacattacaa 182621  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    |  |   ||||||||||||||| | |||||||||||    
T  182620 aattcccgaaatcataggcaatcgttctaatactcc 182585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 277
Target Start/End: Complemental strand, 16700 - 16545
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattac 219  Q
    ||||||||||||||||| ||||| | ||| ||  ||||||||||||||||| || ||| |||| ||| ||||||||  ||||||||| |||  |||||||    
T  16700 aaatcttcagatgtcttgctttgtc-gatatgtatgatttcttcgtgaatttcaacaa-aacatccttaaattgttatgtttcaggaggaatagaattac 16603  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaata 277  Q
    | |||||||| ||||||| | |||||||||   |||||||||  ||||||||||||||    
T  16602 agactcaaatgtagaaaatattacaaatgtcccgaaatcataaacaattgatctaata 16545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 41770 - 41699
Alignment:
Q  123 aatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg 195  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||||| |||| |||| || ||||||||||||    
T  41770 aatcttcagaggtcttgctttgcctgatttgcatgatttcttcgtgatttacctcaa-aaaaccctaaaattg 41699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1017 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 277
Target Start/End: Original strand, 462 - 618
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattac 219  Q
    ||||||||| ||||||| ||||   |||| ||| |||||||||||| | |||||  || |||| ||||||||||   |||||| |||||||  |||||||    
T  462 aaatcttcatatgtcttacttttt-tgatatgcatgatttcttcgtaatttacaaaaaaaacatcctaaaattgcaatgtttcgggaagaatagaattac 560  T
Q  220 aaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaata 277  Q
      |||||||||||||||| | || |||||||  ||||||||| ||||||| |||||||    
T  561 tgactcaaatatagaaaacattaaaaatgttccgaaatcataagcaattgttctaata 618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 281
Target Start/End: Original strand, 11964 - 12115
Alignment:
Q  130 agatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaa 227  Q
    ||||||||| |||||| |||||||  |||||||||||| ||||| ||||| ||||||||| ||||| |  ||||  |||||||  |||||||| ||||||    
T  11964 agatgtcttgctttgc-tgatttgtatgatttcttcgtaaattaaatcaa-aacaccctagaattgctatgttttgggaagaatagaattacagactcaa 12061  T
Q  228 atatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    |||||||||| | || ||||||   ||||||||| | |||| || |||||||||    
T  12062 atatagaaaacattataaatgtcccgaaatcataaggaattaatataatactcc 12115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 36425 - 36352
Alignment:
Q  15 tgaaatgcctgttttctttgccttttaaggtgtttatttcaatgtaagatgttttggaacttgggaatataatt 88  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| ||  ||| || ||||||| ||||||    
T  36425 tgaaatgtctgttttctttacctttttaggtgtttatttcaatgtaagttgccttgaaatttgggaacataatt 36352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 36321 - 36207
Alignment:
Q  167 tgaattacatcaagaacaccctaaaattgtt--gtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggc 264  Q
    ||||||||||| |||| |||||||||||  |  ||||| |||||||  |||||||| |||||||||||||||| ||||  |||||   ||||| |  | |    
T  36321 tgaattacatctagaataccctaaaatttctctgtttcgggaagaatagaattacatactcaaatatagaaaacaatattaatgtcccgaaatgaaggcc 36222  T
Q  265 aattgatctaatact 279  Q
    |||||||||||||||    
T  36221 aattgatctaatact 36207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 4782 - 4847
Alignment:
Q  216 ttacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||| |||||||||||||||| | |||||| ||  |||||||||||||||| | |||||||||||    
T  4782 ttacagactcaaatatagaaaacattacaaaagtgctgaaatcataggcaatcgttctaatactcc 4847  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 202071 - 201992
Alignment:
Q  117 cacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgtt 197  Q
    ||||||||||||| ||| |||| ||||| | ||||||| |||||||| | |||||||||||||||||| |  |||||||||    
T  202071 cacataaatcttcggatttcttgctttgtc-gatttgcatgatttctccatgaattacatcaagaacatcgaaaaattgtt 201992  T

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Target: scaffold0015; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 202165 - 202104
Alignment:
Q  55 aatgtaagatgttttggaacttgggaatataattccttcctttgtgaagtcttttgaggcct 116  Q
    |||||||||||| |||||||||||||| | ||||||| ||| ||| | |||||| |||||||    
T  202165 aatgtaagatgtcttggaacttgggaacaaaattcctccctctgtaatgtctttggaggcct 202104  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 95512 - 95647
Alignment:
Q  148 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgt--tgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaa 245  Q
    ||||||| ||||||||||||||||||| |||| ||   | |||||||||  ||||||||||| |   |||||||| | ||||||||||||||   |||||    
T  95512 gatttgcatgatttcttcgtgaattacttcaaaaatctcttaaaattgttatgtttcaggaaaactagaattacagattcaaatatagaaaactttacaa 95611  T
Q  246 atgttatgaaatcataggcaattgatctaatactcc 281  Q
    | |   | |||||||||||||| | |||||||||||    
T  95612 aagccctaaaatcataggcaatcgttctaatactcc 95647  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 93035 - 92937
Alignment:
Q  150 tttgcttgatttcttcgtgaattacatcaagaacaccctaaaattg--ttgtttcaggaagaacggaattacaaactcaaatatagaaaagaatacaaa 246  Q
    ||||| ||||||||||||||||||| |||| ||| |||||||||||   |||||| |||| |   |||||| | |||||||||||||||| | ||||||    
T  93035 tttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactagaattatagactcaaatatagaaaacattacaaa 92937  T

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Target: scaffold0094 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 12094 - 12146
Alignment:
Q  122 aaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattaca 175  Q
    |||||||||||||||||||| | || ||| ||| ||||||||||||||||||||    
T  12094 aaatcttcagatgtctttctcttcc-gatatgcatgatttcttcgtgaattaca 12146  T

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Target: scaffold0441 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 2199 - 2128
Alignment:
Q  123 aatcttcagatgt-ctttctttgcctgatttgcttgatttcttcgtgaattacatcaagaacaccctaaaatt 194  Q
    ||||||||||||| ||| | ||||| ||||| | |||||||||||||||||||||||| ||| ||||| ||||    
T  2199 aatcttcagatgttcttgcattgcc-gatttacatgatttcttcgtgaattacatcaaaaactccctagaatt 2128  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 192077 - 192145
Alignment:
Q  213 gaattacaaactcaaatatagaaaagaatacaaatgttatgaaatcataggcaattgatctaatactcc 281  Q
    ||||||||||||||||||||||||| | |||||| ||   ||||||||| ||||| | ||||| |||||    
T  192077 gaattacaaactcaaatatagaaaacattacaaaagtcccgaaatcataagcaatcgctctaacactcc 192145  T

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