View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9660_low_23 (Length: 249)
Name: NF9660_low_23
Description: NF9660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9660_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 237
Target Start/End: Complemental strand, 10753185 - 10752967
Alignment:
| Q |
19 |
catccgaaacacaaaaagatctnnnnnnncaacacatcacgtcataaaattgattaaatagtaatatcaacaaatcacatcacaaaattgattaaatatt |
118 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
10753185 |
catccgaaacacaaaaagatctaaaaaaacaacacatcacgtcataaaattgattaaatagtaataccaacaaatcacatcacaaaattgattaaatatc |
10753086 |
T |
|
| Q |
119 |
gatgacttaaaattgattaggcactatcatcagaaacaaataagatctnnnnnnnnnnnncaataattatggnnnnnnnagatccaaaaatagcgataat |
218 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |
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| T |
10753085 |
gatgacttaaaattgattaagcactatcatcagaaacaaataagatctaaaaaacaaaaacaataattatgattttttgagatccaaaaatagcgataat |
10752986 |
T |
|
| Q |
219 |
cttgaatttgcctgagtat |
237 |
Q |
| |
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|||||| |||||||||||| |
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| T |
10752985 |
cttgaacttgcctgagtat |
10752967 |
T |
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