View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9661A_low_105 (Length: 257)

Name: NF9661A_low_105
Description: NF9661A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9661A_low_105
NF9661A_low_105
[»] chr4 (32 HSPs)
chr4 (69-257)||(25091548-25091736)
chr4 (72-257)||(53630446-53630631)
chr4 (69-257)||(10356405-10356593)
chr4 (79-256)||(16998421-16998598)
chr4 (78-257)||(11425838-11426017)
chr4 (69-257)||(42875692-42875880)
chr4 (73-257)||(19610219-19610403)
chr4 (100-257)||(15115117-15115274)
chr4 (100-257)||(37019565-37019722)
chr4 (104-251)||(6633541-6633688)
chr4 (116-251)||(46001547-46001682)
chr4 (100-216)||(9924089-9924206)
chr4 (100-216)||(11478653-11478770)
chr4 (69-137)||(10694214-10694282)
chr4 (69-137)||(10907980-10908048)
chr4 (100-216)||(14549696-14549812)
chr4 (187-253)||(26921708-26921774)
chr4 (69-130)||(12424259-12424320)
chr4 (100-213)||(19434559-19434672)
chr4 (100-222)||(9870444-9870568)
chr4 (87-152)||(2424374-2424439)
chr4 (100-181)||(15613061-15613142)
chr4 (69-130)||(40230328-40230389)
chr4 (69-130)||(19022366-19022427)
chr4 (99-152)||(35811375-35811428)
chr4 (100-181)||(51993532-51993613)
chr4 (116-203)||(21144-21232)
chr4 (69-152)||(25513851-25513934)
chr4 (73-130)||(9639032-9639089)
chr4 (69-130)||(33186925-33186986)
chr4 (100-137)||(15008978-15009015)
chr4 (100-137)||(21062656-21062693)
[»] chr7 (48 HSPs)
chr7 (69-257)||(12465229-12465417)
chr7 (69-257)||(8851128-8851316)
chr7 (69-257)||(12322899-12323087)
chr7 (69-257)||(12372169-12372357)
chr7 (69-257)||(13147441-13147629)
chr7 (69-257)||(32433558-32433746)
chr7 (69-253)||(11067367-11067551)
chr7 (69-257)||(12127132-12127320)
chr7 (73-257)||(16999328-16999515)
chr7 (99-257)||(20620181-20620339)
chr7 (95-255)||(20214044-20214204)
chr7 (100-257)||(14180398-14180555)
chr7 (100-257)||(20586247-20586404)
chr7 (69-257)||(46386061-46386245)
chr7 (104-251)||(10277228-10277375)
chr7 (100-255)||(24269947-24270102)
chr7 (69-224)||(47974789-47974944)
chr7 (69-162)||(44374833-44374926)
chr7 (69-162)||(44383698-44383791)
chr7 (117-229)||(25943041-25943153)
chr7 (100-212)||(14218895-14219008)
chr7 (100-216)||(15095637-15095753)
chr7 (100-212)||(35771441-35771554)
chr7 (69-130)||(43276713-43276774)
chr7 (100-222)||(48807325-48807448)
chr7 (100-200)||(16078281-16078382)
chr7 (94-257)||(33002056-33002211)
chr7 (72-148)||(18074619-18074695)
chr7 (69-204)||(12754582-12754716)
chr7 (143-222)||(13132364-13132443)
chr7 (100-222)||(8135238-8135359)
chr7 (150-212)||(12557861-12557923)
chr7 (100-212)||(4071759-4071872)
chr7 (150-222)||(15140143-15140215)
chr7 (72-152)||(19195611-19195691)
chr7 (73-129)||(19283079-19283135)
chr7 (87-152)||(4690650-4690715)
chr7 (97-170)||(13744655-13744728)
chr7 (69-130)||(14160825-14160886)
chr7 (100-222)||(13698638-13698761)
chr7 (72-130)||(58385-58443)
chr7 (100-181)||(10658851-10658932)
chr7 (69-137)||(32160169-32160237)
chr7 (150-222)||(11054642-11054715)
chr7 (100-204)||(15289052-15289157)
chr7 (222-255)||(25942368-25942401)
chr7 (100-137)||(29052182-29052219)
chr7 (100-152)||(16250222-16250274)
[»] chr6 (28 HSPs)
chr6 (69-257)||(7827867-7828055)
chr6 (69-257)||(19655200-19655388)
chr6 (69-257)||(23150256-23150444)
chr6 (69-257)||(27125446-27125634)
chr6 (72-257)||(18703459-18703648)
chr6 (72-257)||(18709394-18709583)
chr6 (100-257)||(15890712-15890869)
chr6 (116-250)||(27329997-27330131)
chr6 (116-250)||(27390737-27390871)
chr6 (101-192)||(24267809-24267900)
chr6 (100-216)||(18928616-18928733)
chr6 (100-255)||(19235021-19235175)
chr6 (100-255)||(30673402-30673550)
chr6 (103-224)||(18585733-18585854)
chr6 (189-255)||(19167926-19167992)
chr6 (100-257)||(28948469-28948627)
chr6 (99-216)||(19401030-19401147)
chr6 (69-130)||(20410481-20410542)
chr6 (69-113)||(17318135-17318179)
chr6 (99-175)||(27572121-27572198)
chr6 (100-161)||(15998880-15998941)
chr6 (100-204)||(31731904-31732009)
chr6 (100-170)||(19167853-19167923)
chr6 (69-130)||(19825455-19825516)
chr6 (73-130)||(23431420-23431477)
chr6 (100-181)||(24550168-24550249)
chr6 (100-152)||(12041620-12041672)
chr6 (69-113)||(25922040-25922084)
[»] chr1 (30 HSPs)
chr1 (69-257)||(19676606-19676794)
chr1 (71-257)||(21046020-21046206)
chr1 (73-257)||(16058287-16058470)
chr1 (69-257)||(20633600-20633791)
chr1 (100-257)||(42912944-42913101)
chr1 (100-204)||(13302849-13302954)
chr1 (100-257)||(51324399-51324556)
chr1 (100-224)||(24723351-24723475)
chr1 (100-255)||(21168831-21168985)
chr1 (100-224)||(7051922-7052046)
chr1 (69-130)||(20588660-20588721)
chr1 (69-130)||(20593198-20593259)
chr1 (69-130)||(41225423-41225484)
chr1 (69-130)||(41226676-41226737)
chr1 (100-203)||(42697732-42697836)
chr1 (100-190)||(4595853-4595944)
chr1 (100-222)||(7320594-7320716)
chr1 (69-212)||(22350656-22350795)
chr1 (169-224)||(44822090-44822145)
chr1 (100-181)||(21239049-21239130)
chr1 (100-141)||(51336490-51336531)
chr1 (69-152)||(28476703-28476786)
chr1 (69-130)||(8306628-8306689)
chr1 (100-141)||(12327743-12327784)
chr1 (69-130)||(12710889-12710950)
chr1 (100-137)||(29763632-29763669)
chr1 (117-170)||(45499374-45499427)
chr1 (100-137)||(46197745-46197782)
chr1 (158-205)||(14801337-14801384)
chr1 (158-205)||(14810211-14810258)
[»] scaffold0737 (1 HSPs)
scaffold0737 (69-257)||(4683-4871)
[»] chr8 (42 HSPs)
chr8 (69-257)||(42817876-42818064)
chr8 (69-257)||(19140660-19140847)
chr8 (87-257)||(5761429-5761598)
chr8 (75-255)||(39935982-39936165)
chr8 (116-257)||(5082228-5082369)
chr8 (116-257)||(6573072-6573213)
chr8 (100-257)||(20083638-20083795)
chr8 (100-256)||(6101753-6101909)
chr8 (104-251)||(37292606-37292753)
chr8 (116-251)||(6202677-6202812)
chr8 (153-257)||(20178581-20178687)
chr8 (100-254)||(20397510-20397656)
chr8 (100-222)||(31722493-31722616)
chr8 (69-152)||(18761448-18761531)
chr8 (100-257)||(22532132-22532289)
chr8 (100-257)||(22536817-22536974)
chr8 (87-190)||(20022027-20022131)
chr8 (69-140)||(23943795-23943866)
chr8 (100-204)||(17906849-17906953)
chr8 (100-222)||(45469219-45469342)
chr8 (87-152)||(4380604-4380669)
chr8 (100-212)||(36727038-36727151)
chr8 (120-257)||(39694297-39694434)
chr8 (69-112)||(21579175-21579218)
chr8 (100-222)||(22317911-22318033)
chr8 (69-112)||(29762837-29762880)
chr8 (69-130)||(22258275-22258336)
chr8 (69-130)||(36306019-36306080)
chr8 (100-203)||(23948211-23948315)
chr8 (71-130)||(18834444-18834503)
chr8 (150-212)||(42265559-42265621)
chr8 (69-130)||(22208291-22208352)
chr8 (100-212)||(23899987-23900100)
chr8 (117-170)||(36305837-36305890)
chr8 (69-113)||(12037133-12037177)
chr8 (100-181)||(23419411-23419493)
chr8 (117-167)||(23889784-23889834)
chr8 (150-222)||(3273819-3273892)
chr8 (100-137)||(17158963-17159000)
chr8 (100-137)||(23479097-23479134)
chr8 (100-137)||(26454723-26454760)
chr8 (100-136)||(19880838-19880874)
[»] chr3 (47 HSPs)
chr3 (69-253)||(22306552-22306736)
chr3 (73-257)||(17044861-17045045)
chr3 (73-257)||(17047021-17047205)
chr3 (73-257)||(49900625-49900809)
chr3 (73-257)||(17518846-17519030)
chr3 (73-257)||(17533708-17533892)
chr3 (100-257)||(40807891-40808048)
chr3 (69-257)||(11259326-11259514)
chr3 (73-257)||(17539001-17539185)
chr3 (69-257)||(35354497-35354685)
chr3 (69-257)||(41172340-41172528)
chr3 (69-257)||(17693962-17694150)
chr3 (72-257)||(40812728-40812909)
chr3 (116-257)||(50348042-50348183)
chr3 (100-257)||(44274313-44274470)
chr3 (100-251)||(10563609-10563760)
chr3 (104-251)||(10311428-10311575)
chr3 (73-249)||(14508749-14508926)
chr3 (73-257)||(15931481-15931664)
chr3 (125-216)||(35064566-35064657)
chr3 (69-163)||(17541423-17541517)
chr3 (100-257)||(19568208-19568365)
chr3 (100-216)||(33565022-33565139)
chr3 (87-222)||(11563654-11563790)
chr3 (100-222)||(42323971-42324094)
chr3 (100-246)||(9510916-9511062)
chr3 (100-246)||(9518891-9519037)
chr3 (100-216)||(35960928-35961045)
chr3 (100-204)||(16050875-16050979)
chr3 (201-257)||(35064681-35064737)
chr3 (207-257)||(5200277-5200327)
chr3 (73-152)||(15566744-15566823)
chr3 (69-222)||(45530572-45530725)
chr3 (100-212)||(13185834-13185947)
chr3 (117-222)||(37038978-37039085)
chr3 (69-112)||(50347604-50347647)
chr3 (100-204)||(24177736-24177840)
chr3 (99-222)||(49968858-49968981)
chr3 (103-201)||(11885560-11885658)
chr3 (100-142)||(5200243-5200285)
chr3 (100-181)||(12509350-12509431)
chr3 (100-141)||(15446868-15446909)
chr3 (73-112)||(6159445-6159484)
chr3 (69-130)||(14641517-14641578)
chr3 (77-130)||(50350793-50350846)
chr3 (73-130)||(53646032-53646089)
chr3 (100-168)||(36528851-36528919)
[»] chr2 (34 HSPs)
chr2 (69-257)||(24436543-24436731)
chr2 (69-257)||(24780809-24780997)
chr2 (69-257)||(5031098-5031286)
chr2 (72-257)||(9975824-9976009)
chr2 (87-257)||(17307381-17307551)
chr2 (73-252)||(22251421-22251600)
chr2 (100-257)||(24516081-24516238)
chr2 (69-253)||(2523716-2523900)
chr2 (100-257)||(40912215-40912372)
chr2 (87-257)||(19201187-19201357)
chr2 (104-251)||(37270600-37270747)
chr2 (137-257)||(27484514-27484634)
chr2 (148-257)||(36841159-36841268)
chr2 (100-222)||(25142133-25142256)
chr2 (73-224)||(22501897-22502050)
chr2 (73-224)||(22509831-22509984)
chr2 (69-214)||(27852605-27852747)
chr2 (100-224)||(357809-357933)
chr2 (102-224)||(1383545-1383667)
chr2 (100-222)||(3539766-3539889)
chr2 (100-200)||(44072509-44072609)
chr2 (69-130)||(14179697-14179758)
chr2 (69-112)||(36841267-36841310)
chr2 (73-130)||(149474-149531)
chr2 (69-113)||(20916346-20916390)
chr2 (69-113)||(21369332-21369376)
chr2 (100-181)||(25046088-25046170)
chr2 (150-222)||(19358820-19358893)
chr2 (69-112)||(31521209-31521252)
chr2 (150-216)||(22259975-22260040)
chr2 (169-223)||(24884399-24884453)
chr2 (100-137)||(21080969-21081006)
chr2 (100-203)||(5986125-5986229)
chr2 (70-130)||(14183436-14183496)
[»] scaffold0064 (1 HSPs)
scaffold0064 (69-257)||(58641-58829)
[»] scaffold1283 (1 HSPs)
scaffold1283 (72-257)||(440-625)
[»] scaffold0001 (3 HSPs)
scaffold0001 (69-257)||(31889-32077)
scaffold0001 (69-257)||(37196-37384)
scaffold0001 (73-255)||(77584-77766)
[»] scaffold0407 (1 HSPs)
scaffold0407 (77-257)||(11251-11431)
[»] scaffold1633 (1 HSPs)
scaffold1633 (70-257)||(1100-1287)
[»] scaffold0111 (2 HSPs)
scaffold0111 (73-257)||(12506-12690)
scaffold0111 (103-257)||(5278-5432)
[»] scaffold0077 (2 HSPs)
scaffold0077 (70-257)||(34234-34421)
scaffold0077 (100-181)||(5921-6002)
[»] scaffold1941 (1 HSPs)
scaffold1941 (100-257)||(33-190)
[»] scaffold0080 (1 HSPs)
scaffold0080 (69-257)||(21762-21950)
[»] scaffold0334 (1 HSPs)
scaffold0334 (100-257)||(413-570)
[»] scaffold0036 (1 HSPs)
scaffold0036 (69-213)||(78154-78298)
[»] chr5 (19 HSPs)
chr5 (73-257)||(21300017-21300201)
chr5 (104-251)||(7484903-7485050)
chr5 (69-257)||(19921533-19921727)
chr5 (100-257)||(20566449-20566598)
chr5 (91-249)||(31622028-31622178)
chr5 (95-224)||(36508628-36508757)
chr5 (69-130)||(23199176-23199237)
chr5 (100-224)||(31456888-31457012)
chr5 (100-212)||(21617928-21618041)
chr5 (99-216)||(22111764-22111881)
chr5 (69-130)||(21398613-21398674)
chr5 (100-181)||(10954060-10954141)
chr5 (100-204)||(20469176-20469281)
chr5 (150-222)||(21405678-21405751)
chr5 (100-152)||(6551290-6551342)
chr5 (99-137)||(266053-266091)
chr5 (169-223)||(17876132-17876186)
chr5 (100-137)||(17011743-17011780)
chr5 (69-130)||(32607285-32607346)
[»] scaffold1766 (1 HSPs)
scaffold1766 (100-257)||(696-853)
[»] scaffold0241 (2 HSPs)
scaffold0241 (100-257)||(3077-3234)
scaffold0241 (158-257)||(2459-2558)
[»] scaffold0207 (1 HSPs)
scaffold0207 (100-257)||(13392-13549)
[»] scaffold0020 (2 HSPs)
scaffold0020 (100-257)||(168999-169156)
scaffold0020 (96-257)||(143506-143667)
[»] scaffold0026 (1 HSPs)
scaffold0026 (100-257)||(146618-146775)
[»] scaffold0019 (1 HSPs)
scaffold0019 (69-204)||(24100-24235)
[»] scaffold0632 (1 HSPs)
scaffold0632 (100-257)||(1060-1217)
[»] scaffold0004 (4 HSPs)
scaffold0004 (87-257)||(328275-328447)
scaffold0004 (99-253)||(75691-75839)
scaffold0004 (186-255)||(72841-72910)
scaffold0004 (99-192)||(110133-110227)
[»] scaffold0047 (1 HSPs)
scaffold0047 (69-257)||(78959-79132)
[»] scaffold0149 (2 HSPs)
scaffold0149 (100-239)||(29573-29711)
scaffold0149 (100-224)||(21539-21663)
[»] scaffold0113 (1 HSPs)
scaffold0113 (100-226)||(35418-35542)
[»] scaffold0956 (1 HSPs)
scaffold0956 (69-183)||(2524-2638)
[»] scaffold0285 (1 HSPs)
scaffold0285 (100-257)||(19656-19805)
[»] scaffold0037 (3 HSPs)
scaffold0037 (100-257)||(112966-113124)
scaffold0037 (150-216)||(81503-81569)
scaffold0037 (100-137)||(117807-117844)
[»] scaffold0112 (1 HSPs)
scaffold0112 (100-255)||(2793-2941)
[»] scaffold0802 (1 HSPs)
scaffold0802 (100-213)||(4709-4823)
[»] scaffold0230 (1 HSPs)
scaffold0230 (103-224)||(6688-6809)
[»] scaffold0083 (2 HSPs)
scaffold0083 (100-257)||(10755-10910)
scaffold0083 (100-175)||(5045-5120)
[»] scaffold0213 (1 HSPs)
scaffold0213 (69-152)||(19207-19290)
[»] scaffold0203 (1 HSPs)
scaffold0203 (73-152)||(17913-17992)
[»] scaffold0628 (1 HSPs)
scaffold0628 (87-216)||(1045-1175)
[»] scaffold0174 (4 HSPs)
scaffold0174 (104-255)||(5167-5310)
scaffold0174 (104-255)||(11287-11430)
scaffold0174 (121-254)||(19605-19737)
scaffold0174 (69-152)||(5454-5537)
[»] scaffold0156 (1 HSPs)
scaffold0156 (106-224)||(16532-16650)
[»] scaffold0032 (1 HSPs)
scaffold0032 (73-152)||(61821-61900)
[»] scaffold0431 (1 HSPs)
scaffold0431 (69-130)||(5655-5716)
[»] scaffold0848 (1 HSPs)
scaffold0848 (99-222)||(2020-2143)
[»] scaffold0379 (2 HSPs)
scaffold0379 (99-216)||(10742-10851)
scaffold0379 (69-130)||(10969-11030)
[»] scaffold0175 (1 HSPs)
scaffold0175 (100-222)||(8571-8694)
[»] scaffold0123 (1 HSPs)
scaffold0123 (100-222)||(7205-7329)
[»] scaffold0100 (1 HSPs)
scaffold0100 (104-251)||(26638-26779)
[»] scaffold0008 (1 HSPs)
scaffold0008 (100-221)||(135504-135625)
[»] scaffold0439 (1 HSPs)
scaffold0439 (148-223)||(12323-12399)
[»] scaffold0328 (1 HSPs)
scaffold0328 (73-152)||(18613-18693)
[»] scaffold0040 (1 HSPs)
scaffold0040 (100-224)||(106051-106175)
[»] scaffold0261 (1 HSPs)
scaffold0261 (187-253)||(6620-6686)
[»] scaffold0028 (1 HSPs)
scaffold0028 (101-222)||(3053-3174)
[»] scaffold1256 (1 HSPs)
scaffold1256 (87-152)||(2187-2252)
[»] scaffold0853 (1 HSPs)
scaffold0853 (69-130)||(2423-2484)
[»] scaffold0251 (1 HSPs)
scaffold0251 (100-216)||(20086-20201)
[»] scaffold0162 (1 HSPs)
scaffold0162 (69-130)||(23861-23922)
[»] scaffold0056 (1 HSPs)
scaffold0056 (100-212)||(67060-67173)
[»] scaffold0107 (1 HSPs)
scaffold0107 (73-113)||(13525-13565)
[»] scaffold0075 (1 HSPs)
scaffold0075 (116-203)||(60843-60931)
[»] scaffold0516 (1 HSPs)
scaffold0516 (87-146)||(5292-5351)
[»] scaffold0010 (1 HSPs)
scaffold0010 (116-203)||(126320-126407)
[»] scaffold0256 (1 HSPs)
scaffold0256 (116-170)||(1863-1917)
[»] scaffold0220 (1 HSPs)
scaffold0220 (100-181)||(19924-20006)
[»] scaffold0180 (1 HSPs)
scaffold0180 (166-212)||(28395-28441)
[»] scaffold0071 (1 HSPs)
scaffold0071 (100-141)||(15283-15324)
[»] scaffold0041 (1 HSPs)
scaffold0041 (105-154)||(5712-5761)
[»] scaffold0070 (1 HSPs)
scaffold0070 (73-112)||(11193-11232)
[»] scaffold0859 (1 HSPs)
scaffold0859 (150-216)||(4618-4684)
[»] scaffold0671 (1 HSPs)
scaffold0671 (100-181)||(4910-4992)
[»] scaffold0601 (1 HSPs)
scaffold0601 (99-137)||(195-233)
[»] scaffold0007 (1 HSPs)
scaffold0007 (166-212)||(158888-158934)
[»] scaffold0002 (1 HSPs)
scaffold0002 (100-181)||(398532-398614)
[»] scaffold0676 (1 HSPs)
scaffold0676 (73-130)||(2903-2960)
[»] scaffold0515 (1 HSPs)
scaffold0515 (100-137)||(5044-5081)
[»] scaffold0436 (1 HSPs)
scaffold0436 (100-137)||(8975-9012)
[»] scaffold0306 (1 HSPs)
scaffold0306 (100-137)||(5044-5081)
[»] scaffold0138 (2 HSPs)
scaffold0138 (100-137)||(21112-21149)
scaffold0138 (100-137)||(34127-34164)
[»] scaffold0057 (1 HSPs)
scaffold0057 (100-137)||(69853-69890)
[»] scaffold0003 (1 HSPs)
scaffold0003 (116-181)||(96369-96434)
[»] scaffold0589 (1 HSPs)
scaffold0589 (116-203)||(4333-4421)
[»] scaffold0414 (1 HSPs)
scaffold0414 (70-130)||(11130-11190)
[»] scaffold0125 (1 HSPs)
scaffold0125 (69-113)||(28590-28634)


Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 25091736 - 25091548
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  25091736 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 25091637  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25091636 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 25091548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 72 - 257
Target Start/End: Original strand, 53630446 - 53630631
Alignment:
Q  72 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 171  Q
    ||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  53630446 caatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 53630545  T
Q  172 ggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  53630546 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtaga 53630631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 10356405 - 10356593
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||||| | ||||||||||||||| |||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  10356405 gagcaatcttgtagagttcgatcttttaatttaaggtaaggttgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 10356504  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  10356505 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggtagttaatagagtagaaaatccgttgaatttgtgtaga 10356593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 79 - 256
Target Start/End: Complemental strand, 16998598 - 16998421
Alignment:
Q  79 gtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgta 178  Q
    ||||||| |||||||||||||||||||||| |||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  16998598 gtagagtccgatcatctaatttaaggtaagagtgagactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgta 16998499  T
Q  179 gttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtag 256  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  16998498 gttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtag 16998421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 78 - 257
Target Start/End: Complemental strand, 11426017 - 11425838
Alignment:
Q  78 tgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgt 177  Q
    |||||||  ||||||||  |||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  11426017 tgtagagaccgatcatcatatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgt 11425918  T
Q  178 agttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11425917 agttatgggaatttgggaattaggttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 11425838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 42875880 - 42875692
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||| |||||||||  ||| ||||||||||||||||||||||  |||||||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  42875880 gagcaattttgtagagtctgattatctaatttaaggtaagggtgggactaactttatataattctaagttgtataattctgaaattgagtttagcatgtt 42875781  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  42875780 gtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtaga 42875692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 73 - 257
Target Start/End: Complemental strand, 19610403 - 19610219
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    ||||||||||| | ||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||    
T  19610403 aatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgtag 19610304  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||  ||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  19610303 gttgtagttatgggaatttgagaattaagttttgacgttgtaattggttgttaatagagtagaaaatccgttaaatttgtgtaga 19610219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 15115274 - 15115117
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15115274 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 15115175  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  15115174 ttttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtaga 15115117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 37019722 - 37019565
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   |||||||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||    
T  37019722 taaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgagaatta 37019623  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  37019622 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtaga 37019565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 6633541 - 6633688
Alignment:
Q  104 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 6633640  T
Q  204 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttg 251  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  6633641 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 6633688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 116 - 251
Target Start/End: Original strand, 46001547 - 46001682
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 215  Q
    ||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  46001547 ctaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggttttgaagttgtaa 46001646  T
Q  216 taggttgttaatagagtagaaaatccgttgaatttg 251  Q
    | |||||||||||||||||||||| |||||||||||    
T  46001647 ttggttgttaatagagtagaaaattcgttgaatttg 46001682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 9924206 - 9924089
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| ||||| |||| |||| || ||||||||||| |||| ||||||||||||||||    
T  9924206 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 9924107  T
Q  199 aggttttgaagttgtaat 216  Q
    |||||| |||||||||||    
T  9924106 aggtttagaagttgtaat 9924089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 11478653 - 11478770
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||||   ||||||| |||||||||||||| ||| |||| ||||| |||| |||| || ||||||| ||| |||| ||||||||||||||||    
T  11478653 taaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagttttgggaatttggaaatt 11478752  T
Q  199 aggttttgaagttgtaat 216  Q
    |||||| ||| |||||||    
T  11478753 aggtttagaacttgtaat 11478770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 10694214 - 10694282
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||| |||||||||||||||||    
T  10694214 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagt 10694282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 10907980 - 10908048
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||| |||||||||||||||||    
T  10907980 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagt 10908048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 14549812 - 14549696
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   ||||||||||||||||||||||||||   || ||||| ||  |||| || || ||||||||||||| ||| ||||||| |||||    
T  14549812 taaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaatta 14549713  T
Q  200 ggttttgaagttgtaat 216  Q
    ||||| |||||||||||    
T  14549712 ggtttagaagttgtaat 14549696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 26921708 - 26921774
Alignment:
Q  187 aatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtg 253  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||    
T  26921708 aatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccaatgaatttgtg 26921774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 12424259 - 12424320
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||    
T  12424259 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaat 12424320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 213
Target Start/End: Original strand, 19434559 - 19434672
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| | | ||||||| |||||    
T  19434559 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 19434658  T
Q  200 ggttttgaagttgt 213  Q
     |||| ||||||||    
T  19434659 agtttagaagttgt 19434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 9870444 - 9870568
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaattt-ggaaat 197  Q
    |||| |||||||||  |||||||||  ||||||||||||||| |||| || ||||||  |||  |||| |||||||||||||| ||||||||| ||||||    
T  9870444 taagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttgggaatttgggaaat 9870543  T
Q  198 taggttttgaagttgtaataggttg 222  Q
    |||| || ||||||||||| |||||    
T  9870544 tagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 2424374 - 2424439
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    |||||||||||  |||||||||||||   |||||||||||||||||||||||||| ||||||||||    
T  2424374 cgatcatctaacctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaa 2424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 15613142 - 15613061
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| ||||||||  |||| ||||||||||| |||||||    
T  15613142 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagtt 15613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 40230389 - 40230328
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||  |||||||||| ||||    
T  40230389 gagcaatcttgtagagttcaatcatctaatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 19022427 - 19022366
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||   |||||||||||||||    
T  19022427 gagcaatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 35811375 - 35811428
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    |||||||||||||||  |||||||||||||||||||||| ||| ||||||||||    
T  35811375 ttaaggtaagggtgggactaactttctctaattctaagtggtataattttgaaa 35811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 51993613 - 51993532
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  ||||| |||| ||||||||||||||  |||| ||||||||  |||| ||||||||||| |||||||    
T  51993613 taaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 51993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 21232 - 21144
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||| |||| ||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||| || | |||||  |||||||||    
T  21232 ctaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaattaggtt 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 25513934 - 25513851
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    |||||||||||||||||  ||||||||||| |||||||| |||||  ||| |||||||||||  | ||||||| |||| |||||    
T  25513934 gagcaatcttgtagagtctgatcatctaatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaa 25513851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 9639089 - 9639032
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||| |||| ||||||| ||||||||||||||  ||| |||||||||||    
T  9639089 aatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaat 9639032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 33186986 - 33186925
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||   ||| |||||||||||    
T  33186986 gagcaattttgtagagtccgatcatctaatttaaggtaggggtgagactagctttctctaat 33186925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 15009015 - 15008978
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  15009015 taaggtaagggtgggactaactttctctaattctaagt 15008978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 21062693 - 21062656
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  21062693 taaggtaagggtgggactaactttctctaattctaagt 21062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 161; Significance: 6e-86; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 12465229 - 12465417
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  12465229 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12465328  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12465329 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 12465417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 8851128 - 8851316
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  8851128 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 8851227  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  8851228 gtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgttaatagagtataaaatctgttgaatttgtgtaga 8851316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 12322899 - 12323087
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  12322899 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12322998  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  12322999 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgttaatagaatagaaaatccgttgaatttgtgtaga 12323087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 12372357 - 12372169
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  12372357 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12372258  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    | ||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  12372257 gcaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtaga 12372169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 13147441 - 13147629
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  13147441 gagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataattctgaaattgagtttagcatgtt 13147540  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  13147541 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtaga 13147629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 32433558 - 32433746
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  32433558 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 32433657  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  32433658 gtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaattagttgaatttgtgtaga 32433746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 69 - 253
Target Start/End: Complemental strand, 11067551 - 11067367
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    |||||||||| |||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  11067551 gagcaatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 11067452  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtg 253  Q
    ||||||||||||||||||||||||| ||||||||||||| || ||||| |||||||||||||||||||||| |||||||||||||    
T  11067451 gtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgttaatagagtagaaaattcgttgaatttgtg 11067367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 12127132 - 12127320
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  12127132 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 12127231  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  12127232 gtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtaga 12127320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 73 - 257
Target Start/End: Complemental strand, 16999515 - 16999328
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattcta--agttgtaaaattttgaaattgagtttagcatgttgt 170  Q
    ||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||  ||||||| |||| ||||||||||||||||||||| |    
T  16999515 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctataagttgtataattctgaaattgagtttagcatgttat 16999416  T
Q  171 aggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    | ||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16999415 atgttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgttaatagagtagaaaatccgttgaatttgtgtaga 16999328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 99 - 257
Target Start/End: Complemental strand, 20620339 - 20620181
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||| ||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  20620339 ttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaatt 20620240  T
Q  199 aggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20620239 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 20620181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 95 - 255
Target Start/End: Complemental strand, 20214204 - 20214044
Alignment:
Q  95 taatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgga 194  Q
    |||| ||||||||||||||  ||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  20214204 taatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 20214105  T
Q  195 aattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20214104 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 20214044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 14180398 - 14180555
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   |||| ||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  14180398 taaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 14180497  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14180498 tgttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 14180555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 20586404 - 20586247
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||| ||||| ||    
T  20586404 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagttatgggaattaggaaacta 20586305  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    || |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  20586304 gggtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 20586247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 46386061 - 46386245
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    |||||||||||||| |||||||||    || |||| ||||||| |  |||||||||||||||||||||||||| |||| ||||||||||||||  |||||    
T  46386061 gagcaatcttgtagtgttcgatca----atctaagataagggtaggactaactttctctaattctaagttgtataattctgaaattgagtttaatatgtt 46386156  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  46386157 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaattccgttgaatttgtgtaga 46386245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 10277375 - 10277228
Alignment:
Q  104 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 10277276  T
Q  204 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttg 251  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  10277275 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 10277228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 100 - 255
Target Start/End: Original strand, 24269947 - 24270102
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||   ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| | ||||   | || ||| |||| |||||    
T  24269947 taaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttgggaatta 24270046  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  24270047 ggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgta 24270102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 47974789 - 47974944
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||| |||||||||||||||   |||  |||||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || ||     
T  47974789 gagcaatattgtagagttcgatcgattaacctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtg 47974888  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgtt 224  Q
    ||||||||||||| ||| ||||||| ||||| |||| ||||||||||| |||||||    
T  47974889 gtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 44374926 - 44374833
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttag 162  Q
    ||||||||| ||||||  |||||||||||| |||||||||||||    ||||||||||||||||||||||||| |||| |||||||||||||||    
T  44374926 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 44383791 - 44383698
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttag 162  Q
    ||||||||| ||||||  |||||||||||| |||||||||||||    ||||||||||||||||||||||||| |||| |||||||||||||||    
T  44383791 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 25943153 - 25943041
Alignment:
Q  117 taactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaat 216  Q
    ||||||||||||||| |  |||||| |||| ||||||||| ||||||||||||| | ||||   | || ||||||||||||||||||||||||| |||||    
T  25943153 taactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaattaggttttgaagtcgtaat 25943054  T
Q  217 aggttgttaatag 229  Q
     ||||||||||||    
T  25943053 tggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 14218895 - 14219008
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| ||||| |||| |||| || |||||||||||||||| || |||||| | ||||    
T  14218895 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttggaatt 14218994  T
Q  199 aggttttgaagttg 212  Q
    |||||| |||||||    
T  14218995 aggtttagaagttg 14219008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 15095637 - 15095753
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  ||||| ||| |||||||||||| |||  ||| ||||| |||| |||| || |||||||||||||||| ||||||||||| ||||    
T  15095637 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15095735  T
Q  199 aggttttgaagttgtaat 216  Q
    |||||| |||||||||||    
T  15095736 aggtttagaagttgtaat 15095753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 35771441 - 35771554
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaatt-gagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  ||||||||||||||||||||||  || |||| ||||| | || |||| || |||||||||||||||| ||| ||||||| ||||    
T  35771441 taaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 35771540  T
Q  199 aggttttgaagttg 212  Q
    |||||| |||||||    
T  35771541 aggtttagaagttg 35771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 43276713 - 43276774
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  43276713 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 43276774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 48807325 - 48807448
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  |||||||||||||||||||||| ||| |||| || |||| || |||| || ||||||| |||||||| ||||||||||| ||||    
T  48807325 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttgggaatt 48807424  T
Q  199 aggttttgaagttgtaataggttg 222  Q
     |||   ||||||||||| |||||    
T  48807425 tggtacagaagttgtaattggttg 48807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 16078382 - 16078281
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  |||||||||||||||||||||| ||| |||| || |||| || |||| || ||||||| |||||||| ||||||||||| ||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatt 16078283  T
Q  199 ag 200  Q
    ||    
T  16078282 ag 16078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 257
Target Start/End: Complemental strand, 33002211 - 33002056
Alignment:
Q  94 ctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgg 193  Q
    |||| ||||||||||||| |  ||||||||||||||||||||||||||  ||| ||||||||  |||| ||       |||||||||| |||||||||||    
T  33002211 ctaacttaaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaattggatttaaca-------ggttgtagtt-tgggaatttgg 33002120  T
Q  194 aaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
     ||||||| || ||||||||||| |||||||   | |||||| |||| |||||||| |||||||    
T  33002119 gaattagggttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtaga 33002056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 18074619 - 18074695
Alignment:
Q  72 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaatttt 148  Q
    |||||||||||||| ||| |||||||||||||||||| ||||   ||||||||||||||||||||| ||| ||||||    
T  18074619 caatcttgtagagtccgaccatctaatttaaggtaagagtgggattaactttctctaattctaagtggtataatttt 18074695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 12754582 - 12754716
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||| |||   |||  ||||||||||||||  ||||||||||||||||||||||| ||  ||| ||||| ||  |||| || ||     
T  12754582 gagcaatcttgtagagttc-atcgattaacctaaggtaagggtgggactaactttctctaattctaagttatatgattctgaaactggatttaacaggtg 12754680  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttt 204  Q
    |||||||||||| |||| ||||||| ||||| ||||    
T  12754681 gtaggttgtagtaatggaaatttgggaattatgttt 12754716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 13132364 - 13132443
Alignment:
Q  143 aattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttg 222  Q
    |||| ||||||||| |||| || ||||||||| |||||| ||||||||||| |||||||||| ||||||||||| |||||    
T  13132364 aattctgaaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttg 13132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 8135238 - 8135359
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   ||||| ||| ||||| |||||| |||  ||| ||||||||| |||| || |||||||||||||||| | ||||||||  |||||    
T  8135238 taaggtaagggtgagactaaccttcactaatcctaagt-gtatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttgagaatta 8135336  T
Q  200 ggttttgaagttgtaataggttg 222  Q
    ||||| ||||||||||| |||||    
T  8135337 ggtttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 12557923 - 12557861
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttg 212  Q
    ||||||| |||| || |||||||||||||||| |||||||||||||||||||||| |||||||    
T  12557923 aaattgaatttaacaggttgtaggttgtagttttgggaatttggaaattaggtttagaagttg 12557861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 4071872 - 4071759
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  ||||||||||||||||||||||  || || | || ||||||  |||| || |||||||||||||||| |||| |||||  ||||    
T  4071872 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgagaatt 4071773  T
Q  199 aggttttgaagttg 212  Q
    |||||| |||||||    
T  4071772 aggtttagaagttg 4071759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 15140215 - 15140143
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttg 222  Q
    ||||||| |||| || |||||||||||||||| ||||||||||| ||||||||||  |||||||||| |||||    
T  15140215 aaattgaatttaacaggttgtaggttgtagttttgggaatttgggaattaggtttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 19195691 - 19195611
Alignment:
Q  72 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    |||||||||||||| |||||||||||| ||||||||||||||  ||| |||||||||||  | ||||||| |||| |||||    
T  19195691 caatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 19195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 19283135 - 19283079
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaa 129  Q
    ||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||    
T  19283135 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaa 19283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 4690650 - 4690715
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    |||||||||||  |||||||| |||||  |||||||||||||||||||||||||| |||| |||||    
T  4690650 cgatcatctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 4690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 13744655 - 13744728
Alignment:
Q  97 atttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 170  Q
    |||||| ||||||||||   ||||||||||||||| || |||||| |||| ||||||| |||||||||||||||    
T  13744655 atttaacgtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 14160825 - 14160886
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||  ||||| |||| ||||    
T  14160825 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaaccttctttaat 14160886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 13698638 - 13698761
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||| |  |||||||||| ||||| |||||||   |||| ||||| |||  |||  |||||| |||||||||||| ||| ||||||| ||||    
T  13698638 taaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttggaaatttgggaatt 13698737  T
Q  199 aggttttgaagttgtaataggttg 222  Q
    ||| || ||||||||||| |||||    
T  13698738 agggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 58385 - 58443
Alignment:
Q  72 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    |||||||||||| | |||||||||||| ||||||||||||||  ||| |||||||||||    
T  58385 caatcttgtagattccgatcatctaatctaaggtaagggtgggactagctttctctaat 58443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 10658851 - 10658932
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  ||||| |||| |||||||||||||||  ||| ||||||||  |||| ||| ||||||| |||||||    
T  10658851 taaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagtt 10658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 32160169 - 32160237
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagt 137  Q
    |||||||||||||||||||||||   |||  ||||||||||||    ||||||||||||||||||||||    
T  32160169 gagcaatcttgtagagttcgatcgattaacctaaggtaagggtaagactaactttctctaattctaagt 32160237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 11054715 - 11054642
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttg 222  Q
    ||||||| |||| || ||||||||||||| || ||||||||| |||||||||| ||  |||||||||| |||||    
T  11054715 aaattgaatttaacaggttgtaggttgtaattttgggaatttgggaaattagggttataagttgtaattggttg 11054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 15289157 - 15289052
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  | ||||||||||||||||||||  || || | || ||||||  |||| || |||||||||||||||| || | |||||  ||||    
T  15289157 taaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgagaatt 15289058  T
Q  199 aggttt 204  Q
    ||||||    
T  15289057 aggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 255
Target Start/End: Complemental strand, 25942401 - 25942368
Alignment:
Q  222 gttaatagagtagaaaatccgttgaatttgtgta 255  Q
    |||||||||||||||||||| |||||||||||||    
T  25942401 gttaatagagtagaaaatccattgaatttgtgta 25942368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 29052182 - 29052219
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  29052182 taaggtaagggtgggactaactttctctaattctaagt 29052219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 16250222 - 16250274
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    ||||||||||||||  |||||||||||||||  | ||||||| ||||||||||    
T  16250222 taaggtaagggtgggactaactttctctaataatgagttgtataattttgaaa 16250274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 7828055 - 7827867
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  7828055 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 7827956  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  7827955 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatcggttgaatttgtgtaga 7827867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 19655200 - 19655388
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  19655200 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 19655299  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  19655300 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtaga 19655388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 23150256 - 23150444
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  23150256 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 23150355  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||  ||||||||||||||||    
T  23150356 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaatttgttgaatttgtgtaga 23150444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 27125446 - 27125634
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| || | | |||||||| ||||||||||    
T  27125446 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataagtctaaaattgagattagcatgtt 27125545  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  27125546 gtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtataga 27125634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 72 - 257
Target Start/End: Complemental strand, 18703648 - 18703459
Alignment:
Q  72 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 171  Q
    |||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  18703648 caatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgta 18703549  T
Q  172 ggttgtagttatgggaatttggaaattaggttttgaagttgtaata----ggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||||||| |||||| |||||||||||||||     ||||||||||||||||||||||||||||||||||| ||||    
T  18703548 ggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtataga 18703459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 72 - 257
Target Start/End: Complemental strand, 18709583 - 18709394
Alignment:
Q  72 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 171  Q
    |||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  18709583 caatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgta 18709484  T
Q  172 ggttgtagttatgggaatttggaaattaggttttgaagttgtaata----ggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||||||| |||||| |||||||||||||||     ||||||||||||||||||||||||||||||||||| ||||    
T  18709483 ggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtataga 18709394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 15890712 - 15890869
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| ||  ||||||| |||||    
T  15890712 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttttgttaatttgggaatta 15890811  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15890812 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 15890869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 116 - 250
Target Start/End: Original strand, 27329997 - 27330131
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 215  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27329997 ctaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaattaggttttgaagttgtaa 27330096  T
Q  216 taggttgttaatagagtagaaaatccgttgaattt 250  Q
    | |||||||||||||||||||||||||||||||||    
T  27330097 ttggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 116 - 250
Target Start/End: Original strand, 27390737 - 27390871
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 215  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27390737 ctaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaattaggttttgaagttgtaa 27390836  T
Q  216 taggttgttaatagagtagaaaatccgttgaattt 250  Q
    | |||||||||||||||||||||||||||||||||    
T  27390837 ttggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 24267900 - 24267809
Alignment:
Q  101 aaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 192  Q
    |||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 24267809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 18928733 - 18928616
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||| |  |||||||||||||||||||||| ||| |||| ||||| |||| |||| || ||||||||||| |||| ||||||||||||||||    
T  18928733 taaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 18928634  T
Q  199 aggttttgaagttgtaat 216  Q
    |||||| |||||||||||    
T  18928633 aggtttagaagttgtaat 18928616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 255
Target Start/End: Complemental strand, 19235175 - 19235021
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||| |||||||||   ||||||||||||||| || |||||| |||| ||||||||| ||||| ||||||| | ||||   | || |||||||| | |||    
T  19235175 taagttaagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaatttggga-tta 19235077  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    ||||||||||| ||||| ||||||||||| |||||||||||| ||||| |||||||    
T  19235076 ggttttgaagtcgtaattggttgttaataaagtagaaaatccattgaacttgtgta 19235021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 255
Target Start/End: Original strand, 30673402 - 30673550
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||   ||||||||||||||| || |||||| |||||||||||||||||||||||| ||| | ||||        |||||| | |||||    
T  30673402 taaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatgatgttgtttgt--------gaattttggaatta 30673493  T
Q  200 ggttttgaagttgtaa-taggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    ||||||||| | |||| | |||||||||||||||||||||| | |||||||||||||    
T  30673494 ggttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgta 30673550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 18585854 - 18585733
Alignment:
Q  103 ggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggt 202  Q
    |||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| ||||| | ||||||||    
T  18585854 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 18585755  T
Q  203 tttgaagttgtaataggttgtt 224  Q
    || ||||||||||| |||||||    
T  18585754 ttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 19167926 - 19167992
Alignment:
Q  189 tttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  19167926 tttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgta 19167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 28948627 - 28948469
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtag-ttatgggaatttggaaatt 198  Q
    |||||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||| ||||||| || | | ||||||| ||||    
T  28948627 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaatttgggaatt 28948528  T
Q  199 aggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||| ||||||||||| |||||||   | ||||||||||  |||||||| |||||||    
T  28948527 aggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtaga 28948469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 19401147 - 19401030
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaat 197  Q
    |||||||||||||||  ||||| ||| |||||||||||| |||  ||| ||||| |||| |||| || |||||||||||||||| ||||||||||  |||    
T  19401147 ttaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaat 19401049  T
Q  198 taggttttgaagttgtaat 216  Q
    |||||||  ||||||||||    
T  19401048 taggtttataagttgtaat 19401030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 20410481 - 20410542
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| |||||||||||||||||||||||||||   || |||||||||||    
T  20410481 gagcaatcttgtagagtgcgatcatctaatttaaggtaagggtggaaatagctttctctaat 20410542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 17318135 - 17318179
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 113  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  17318135 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgg 17318179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 27572121 - 27572198
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcat-gttgtaggtt 175  Q
    ||||||||||||||   |||||||||||||||||||||| ||| |||| ||||||||| |||| ||| ||||||||||    
T  27572121 ttaaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaatttaacatggttgtaggtt 27572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 15998941 - 15998880
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagttta 161  Q
    |||||||||||||   |||||||||||||||||||||||||| |||| |||||  |||||||    
T  15998941 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagttta 15998880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 31731904 - 31732009
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  ||||||||||| ||||||||||  || |||| || ||||||  |||  || |||||||||||||||| |||| |||||  ||||    
T  31731904 taaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgagaatt 31732003  T
Q  199 aggttt 204  Q
    ||||||    
T  31732004 aggttt 31732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 19167853 - 19167923
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 170  Q
    ||||||||||||||   ||||||| ||||||  || |||||| |||| ||| |||||||||||||||||||    
T  19167853 taaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgt 19167923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 19825455 - 19825516
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||| ||||||  |||||||||||| |||||||||||||   ||| |||||||||||    
T  19825455 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagactagctttctctaat 19825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 23431420 - 23431477
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||| |||||||||||| ||||||||| ||||  ||||| |||| ||||    
T  23431420 aatcttgtagagtccgatcatctaatctaaggtaagcgtgggactaaccttctttaat 23431477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 24550168 - 24550249
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  ||||  |||| ||||| ||||||||  |||| ||||||||  |||| ||||||||||| |||||||    
T  24550168 taaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 24550249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 12041620 - 12041672
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| |||||    
T  12041620 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaa 12041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 25922084 - 25922040
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 113  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||    
T  25922084 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgg 25922040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 19676794 - 19676606
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  19676794 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 19676695  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19676694 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 19676606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 71 - 257
Target Start/End: Original strand, 21046020 - 21046206
Alignment:
Q  71 gcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 170  Q
    ||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  21046020 gcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 21046119  T
Q  171 aggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21046120 aggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 21046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 73 - 257
Target Start/End: Original strand, 16058287 - 16058470
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||  |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  16058287 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 16058386  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16058387 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 16058470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 20633600 - 20633791
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||  ||||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  20633600 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaacttgctctaattctaagttgtataattctgaaattgagtttagcatgtt 20633699  T
Q  169 gtaggttgtag---ttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||| |||   |||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||  ||||||||||||||||    
T  20633700 gtaggttatagttattatgggaatttgggaattaggttttgaagttgtaattggttgttaatagaataaaaaataagttgaatttgtgtaga 20633791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 42913101 - 42912944
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||| | |||||    
T  42913101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttgtgggaatttaggaatta 42913002  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  42913001 ggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtaga 42912944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 13302954 - 13302849
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| ||||| |||| |||| || |||||||||||||||| ||||||||||| ||||    
T  13302954 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 13302855  T
Q  199 aggttt 204  Q
    ||||||    
T  13302854 aggttt 13302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 51324556 - 51324399
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   ||||||||| ||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| |||||| |||| |||||    
T  51324556 taaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattgggaatta 51324457  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||  |||||||||| |||||||   | |||||||||||  ||||||| |||||||    
T  51324456 ggtttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtaga 51324399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 24723351 - 24723475
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||| |||| || || |||| |||||||| ||| ||||||  |||||    
T  24723351 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttgagaatta 24723450  T
Q  200 ggttttgaagttgtaataggttgtt 224  Q
     |||| ||||||||||| |||||||    
T  24723451 tgtttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 100 - 255
Target Start/End: Complemental strand, 21168985 - 21168831
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||   ||||||||||||||| || |||||| |||| | ||||||||||||||||||||| | ||||   | || |||||||| ||| |    
T  21168985 taaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgggaataa 21168886  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    ||||||||| | ||  |  ||| ||||||||||||||||||| |||||||||||||    
T  21168885 ggttttgaattagt-ttttgtttttaatagagtagaaaatccattgaatttgtgta 21168831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 7051922 - 7052046
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || |||| || ||||| | | ||||||| |||||    
T  7051922 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttttagaaatttgggaatta 7052021  T
Q  200 ggttttgaagttgtaataggttgtt 224  Q
    ||||| ||| ||||||| |||||||    
T  7052022 ggtttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 20588721 - 20588660
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||   || |||||||||||    
T  20588721 gagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20588660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 20593259 - 20593198
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||   || |||||||||||    
T  20593259 gagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 41225423 - 41225484
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    |||||||||||| |||| |||||||||||||||||||||||||||  ||||| |||| ||||    
T  41225423 gagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41225484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 41226676 - 41226737
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    |||||||||||| |||| |||||||||||||||||||||||||||  ||||| |||| ||||    
T  41226676 gagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41226737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 42697836 - 42697732
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||||   ||||| |||| ||||||||||||||| |||| ||| |||||  |||| ||||||||||||||||||| || | |||||  ||||    
T  42697836 taaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaatt 42697737  T
Q  199 aggtt 203  Q
    |||||    
T  42697736 aggtt 42697732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 4595853 - 4595944
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatt 190  Q
    |||||||||||||   |||||||||||||||||||||  ||| |||| || |||| || |||| || |||||||||||||||| ||||||||    
T  4595853 taaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttgggaatt 4595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 7320594 - 7320716
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  ||||| | | |||||||||||| |||  ||| ||||| |||| |||| || ||||||| |||||||| ||||||||||| ||||    
T  7320594 taaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgggaatt 7320692  T
Q  199 aggttttgaagttgtaataggttg 222  Q
    | |||| || |||||||| |||||    
T  7320693 atgtttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 212
Target Start/End: Complemental strand, 22350795 - 22350656
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgt 167  Q
    ||||||||||||||||| ||||||    || ||||||||||||||  ||||| |||  ||||||| |||  ||  ||| ||||| |||| |||| || ||    
T  22350795 gagcaatcttgtagagtccgatca----atctaaggtaagggtgggactaaccttcaataattctgagta-tatgattctgaaaattgaatttaacaagt 22350701  T
Q  168 tgtaggttgtagttatgggaatttggaaattaggttttgaagttg 212  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  22350700 tgtaggttgtagttttgggaatttgggaattagggttagaagttg 22350656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 44822090 - 44822145
Alignment:
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgtt 224  Q
    ||||||||||||| ||| ||||||| |||||||||| ||||||||||| |||||||    
T  44822090 gtaggttgtagttctggaaatttgggaattaggtttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 21239049 - 21239130
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||| ||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || |||||||||||||    
T  21239049 taaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 51336531 - 51336490
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgta 141  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  51336531 taaggtaagggtgggactaactttctctaattctaagttgta 51336490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 28476703 - 28476786
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    ||||||||||| ||||| || ||||||||| ||||||||||||||  |||  ||||||||||  | ||||||| |||| |||||    
T  28476703 gagcaatcttgcagagtccggtcatctaatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaa 28476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 8306689 - 8306628
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||| ||||||  |||||||||||| ||||||||| ||||  ||| |||||||||||    
T  8306689 gagcaatctcgtagagaccgatcatctaatctaaggtaagagtgggactagctttctctaat 8306628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 12327743 - 12327784
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgta 141  Q
    |||||||||||||   ||||||||||||||||||||||||||    
T  12327743 taaggtaagggtgagactaactttctctaattctaagttgta 12327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 12710950 - 12710889
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| | |||||||||| |||||||| | |||  ||| |||||||||||    
T  12710950 gagcaatcttgtagagtcccatcatctaatctaaggtaaagatgggactagctttctctaat 12710889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 29763632 - 29763669
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  29763632 taaggtaagggtgggactaactttctctaattctaagt 29763669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 45499427 - 45499374
Alignment:
Q  117 taactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 170  Q
    ||||| ||||||||| || |||||| |||| |||||||||||||||||| ||||    
T  45499427 taactctctctaattttaggttgtataattctgaaattgagtttagcatattgt 45499374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 46197745 - 46197782
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  46197745 taaggtaagggtgggactaactttctctaattctaagt 46197782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 14801384 - 14801337
Alignment:
Q  158 tttagcatgttgtaggttgtagttatgggaattt-ggaaattaggtttt 205  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  14801384 tttagcatgttgtaggtt-tagttttgggaatttgggaaattaggtttt 14801337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 14810258 - 14810211
Alignment:
Q  158 tttagcatgttgtaggttgtagttatgggaattt-ggaaattaggtttt 205  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  14810258 tttagcatgttgtaggtt-tagttttgggaatttgggaaattaggtttt 14810211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 4683 - 4871
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  4683 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 4782  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4783 gtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 4871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 42817876 - 42818064
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  42817876 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 42817975  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  42817976 gtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtaga 42818064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 19140847 - 19140660
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||||||||| |||| ||||||||||||||||| |||    
T  19140847 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta-ctttctctaattctaagttgtataattctgaaattgagtttagcaagtt 19140749  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19140748 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 19140660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 87 - 257
Target Start/End: Complemental strand, 5761598 - 5761429
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatggg 186  Q
    |||||||||||  ||||||||||||||  |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5761598 cgatcatctaacctaaggtaagggtgggactaactttctctaattctaagt-gtataattttgaaattgagtttagcatgttgtaggttgtagttatggg 5761500  T
Q  187 aatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  5761499 aatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtaga 5761429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 75 - 255
Target Start/End: Original strand, 39935982 - 39936165
Alignment:
Q  75 tcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt---gta 171  Q
    ||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||| |||||||||||||||||||||   |||    
T  39935982 tcttgtagagtccgatcatctaatttaaggtaagggtgggattaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgttgta 39936081  T
Q  172 ggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    |||||||||||||||||||||  ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  39936082 ggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgta 39936165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 5082228 - 5082369
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 215  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5082228 ctaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaa 5082327  T
Q  216 taggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    | ||||||||||||||||||||||||||||||||||||||||    
T  5082328 ttggttgttaatagagtagaaaatccgttgaatttgtgtaga 5082369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 6573072 - 6573213
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 215  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  6573072 ctaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgaggttttgaagttgtaa 6573171  T
Q  216 taggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    | |||||||||||||||||||||| |||||||||||||||||    
T  6573172 ttggttgttaatagagtagaaaattcgttgaatttgtgtaga 6573213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 20083638 - 20083795
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaatta 20083737  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  20083738 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtaga 20083795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 100 - 256
Target Start/End: Original strand, 6101753 - 6101909
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||| |||||  |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| |    
T  6101753 taaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaatttgggaatca 6101852  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtag 256  Q
    |||||||||||| |||| |||||||||||||||||||||||  ||||||||||||||    
T  6101853 ggttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtag 6101909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 37292753 - 37292606
Alignment:
Q  104 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 37292654  T
Q  204 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttg 251  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  37292653 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 37292606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 116 - 251
Target Start/End: Complemental strand, 6202812 - 6202677
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 215  Q
    ||||||||||||||||||| |||||| |||| ||||||||| ||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  6202812 ctaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggttttgaagttgtaa 6202713  T
Q  216 taggttgttaatagagtagaaaatccgttgaatttg 251  Q
    | ||||||||||||||||||||||||||||||||||    
T  6202712 ttggttgttaatagagtagaaaatccgttgaatttg 6202677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 20178581 - 20178687
Alignment:
Q  153 ttgagtttagca-tgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgt-aataggttgttaatagagtagaaaatccgttgaattt 250  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  20178581 ttgagtttagcaatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgttaatagagtagaaaattcgttgaattt 20178680  T
Q  251 gtgtaga 257  Q
    |||||||    
T  20178681 gtgtaga 20178687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 100 - 254
Target Start/End: Original strand, 20397510 - 20397656
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||   ||||||||||||||||||||||||| |||| |||||||||||||||||||||    |||||     || || ||||| |||||    
T  20397510 taaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt----gttgt-----tgtgattttgggaatta 20397600  T
Q  200 ggttttgaagttgtaa-taggttgttaatagagtagaaaatccgttgaatttgtgt 254  Q
    |||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  20397601 ggttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 31722493 - 31722616
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaatt-gagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||| |||||||||  |||||||||||||||||||||| ||| |||||||||| | || |||| || |||||||||||||||| ||||||||||||||||    
T  31722493 taagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttggaaatt 31722592  T
Q  199 aggttttgaagttgtaataggttg 222  Q
     ||||| ||||||||||| |||||    
T  31722593 tggtttagaagttgtaattggttg 31722616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 18761531 - 18761448
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||| ||| |||| |||||    
T  18761531 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaattctaagtggtataattctgaaa 18761448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 22532132 - 22532289
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| || |||| |||||    
T  22532132 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22532231  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||  |||||||||| | |||||   | ||||||||||  |||||||| |||||||    
T  22532232 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtaga 22532289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 22536817 - 22536974
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| || |||| |||||    
T  22536817 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22536916  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||  |||||||||| | |||||   | ||||||||||  |||||||| |||||||    
T  22536917 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtaga 22536974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 20022027 - 20022131
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgg 185  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||| ||| |||| || |||| || |||| || |||||||||||||||| |||    
T  20022027 cgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttgg 20022126  T
Q  186 gaatt 190  Q
    |||||    
T  20022127 gaatt 20022131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 23943795 - 23943866
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgt 140  Q
    ||||||||||||||||| || ||||||||||||||||||||||||   || |||||||||||||||||||||    
T  23943795 gagcaatcttgtagagtccggtcatctaatttaaggtaagggtgggtatagctttctctaattctaagttgt 23943866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 17906849 - 17906953
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || |||||||||||||||  |||| |||||  |||||    
T  17906849 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagtgttggggatttgagaatta 17906948  T
Q  200 ggttt 204  Q
    |||||    
T  17906949 ggttt 17906953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 45469219 - 45469342
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| || |||| || |||| || |||||||||| ||||| ||  ||||||| ||||    
T  45469219 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttgggaatt 45469318  T
Q  199 aggttttgaagttgtaataggttg 222  Q
    | |||| ||||||||||| |||||    
T  45469319 atgtttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 4380604 - 4380669
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    |||||||||||  ||||||||||||||  |||||||||||||||||||||||||| |||| |||||    
T  4380604 cgatcatctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 4380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 36727038 - 36727151
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| || ||||||  |||| || |||||||||||||||| | || |||||  ||||    
T  36727038 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttttgggatttgagaatt 36727137  T
Q  199 aggttttgaagttg 212  Q
    |||||| |||||||    
T  36727138 aggtttagaagttg 36727151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 257
Target Start/End: Original strand, 39694297 - 39694434
Alignment:
Q  120 ctttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaatagg 219  Q
    |||||||||||| |||||||||  ||| ||||| ||  |||| || |||||||||||||||| ||||||||||| ||||||| || || ||||||||  |    
T  39694297 ctttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagacgttgtaattag 39694396  T
Q  220 ttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||    | |||||| |||| |||||||| |||||||    
T  39694397 ttgtcgtaatagtagagaatctgttgaattggtgtaga 39694434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 21579175 - 21579218
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  21579175 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 21579218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 22317911 - 22318033
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  ||||| ||| |||||||||||| |||  ||| ||||| |||| |||| || ||| ||||||||||||  |||||||||| | ||    
T  22317911 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttgggattt 22318009  T
Q  199 aggttttgaagttgtaataggttg 222  Q
    |||||| ||||||||||| |||||    
T  22318010 aggtttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 29762837 - 29762880
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  29762837 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 29762880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 22258275 - 22258336
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    |||||||||||||| || ||||||||||||||||||||||||||   ||| |||||||||||    
T  22258275 gagcaatcttgtagtgtccgatcatctaatttaaggtaagggtgagactagctttctctaat 22258336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 36306080 - 36306019
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| |||||||||||| |||||||||||||   ||| |||||||||||    
T  36306080 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgagactagctttctctaat 36306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 23948315 - 23948211
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||| ||||| |||| |||||||||||||||  ||| || ||| ||  |||| || |||||||||||||||| |||| |||||  ||||    
T  23948315 taaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 23948216  T
Q  199 aggtt 203  Q
    |||||    
T  23948215 aggtt 23948211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 18834503 - 18834444
Alignment:
Q  71 gcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    |||||||||||| |  |||||||||||||||||||||||||||  ||| |||||||||||    
T  18834503 gcaatcttgtagtgcccgatcatctaatttaaggtaagggtgggactagctttctctaat 18834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 42265559 - 42265621
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttg 212  Q
    ||||||| |||| || |||||||||||||||| ||||||||||| ||||||| || |||||||    
T  42265559 aaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagaagttg 42265621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 22208352 - 22208291
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||  ||| |||||||||||    
T  22208352 gagcaatctggtagagaccgatcatctaatctaaggtaagggtgggactagctttctctaat 22208291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 23899987 - 23900100
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||||   ||||||||||||||||||||||  || || | ||| |||||| |||| || |||||||| ||||||| |||| |||||  || |    
T  23899987 taaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagttttggggatttgagaact 23900086  T
Q  199 aggttttgaagttg 212  Q
    |||||| |||||||    
T  23900087 aggtttagaagttg 23900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 36305890 - 36305837
Alignment:
Q  117 taactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 170  Q
    ||||||||| ||||| || |||||| |||| |||||||||||||||||||||||    
T  36305890 taactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 12037133 - 12037177
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 113  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||    
T  12037133 gagcaatctcgtagagtccgatcatctaatataaggtaagggtgg 12037177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 23419493 - 23419411
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| ||| |||||  |||| ||| ||||||| |||||||    
T  23419493 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatattgtaggatgtagtt 23419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 23889834 - 23889784
Alignment:
Q  117 taactttctctaattctaagttgtaaaattttgaaattgagtttagcatgt 167  Q
    |||||||||||||||||| |||||| |||| ||||||||| |||| |||||    
T  23889834 taactttctctaattctaggttgtataattctgaaattgaatttaacatgt 23889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 3273892 - 3273819
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttg 222  Q
    ||||||| |||| || ||||| |||||||||| ||||||||| |||||||||| || |||||||| || |||||    
T  3273892 aaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtgattggttg 3273819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 17158963 - 17159000
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  17158963 taaggtaagggtgggactaactttctctaattctaagt 17159000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 23479134 - 23479097
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  23479134 taaggtaagggtgggactaactttctctaattctaagt 23479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 26454760 - 26454723
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  26454760 taaggtaagggtgggactaactttctctaattctaagt 26454723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 19880874 - 19880838
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaag 136  Q
    ||||||||||||||  |||||||||||||||||||||    
T  19880874 taaggtaagggtgggactaactttctctaattctaag 19880838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 69 - 253
Target Start/End: Original strand, 22306552 - 22306736
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  22306552 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 22306651  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtg 253  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22306652 gtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 22306736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 73 - 257
Target Start/End: Complemental strand, 17045045 - 17044861
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  17045045 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 17044946  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  17044945 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtaga 17044861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 73 - 257
Target Start/End: Complemental strand, 17047205 - 17047021
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  17047205 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 17047106  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||  |||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  17047105 gttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgttaatagagtaaaaaatccgttgaatttgtgtaga 17047021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 73 - 257
Target Start/End: Complemental strand, 49900809 - 49900625
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    ||||| ||||||  |||||||||||| ||||||||||||||  |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  49900809 aatctcgtagagaccgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 49900710  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49900709 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 49900625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 73 - 257
Target Start/End: Original strand, 17518846 - 17519030
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    |||||| |||||| |||||||||||| ||||| ||||||||  |||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||    
T  17518846 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17518945  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17518946 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 17519030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 73 - 257
Target Start/End: Original strand, 17533708 - 17533892
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    |||||| |||||| |||||||||||| ||||| ||||||||  |||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||    
T  17533708 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17533807  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17533808 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 17533892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 40808048 - 40807891
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40808048 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40807949  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40807948 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 40807891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 11259514 - 11259326
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  11259514 gagcaatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaatttagcatgtt 11259415  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||    
T  11259414 gtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgttaataaagtagaaaatccgttgaatttgtgtaga 11259326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 73 - 257
Target Start/End: Complemental strand, 17539185 - 17539001
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    ||||||||||| | ||||||||||||||||||||||||||   |||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||    
T  17539185 aatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttatctaattctaagttgtataattctgaaattgattttatcatgttgtag 17539086  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  17539085 gttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgttaatagagtagaaaatctgttgaatttgtgtaga 17539001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 35354685 - 35354497
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| | ||||||||||||||| |||| ||||  |||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  35354685 gagcaatcttgtagagtccaatcatctaatttaagctaagtgtgggactaactttctctaattttaagttgtataattctgaaattgagtttagcatgtt 35354586  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||||||||||||||||||    
T  35354585 gttggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgttggtagagtagaaaatccgttgaatttgtgtaga 35354497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 41172340 - 41172528
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    |||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||| || ||||||||| || | |||||||||||||||||||||    
T  41172340 gagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctacttataagttgtataactctgaaattgagtttagcatgtt 41172439  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  41172440 gtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtaga 41172528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 17694150 - 17693962
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||| |||||||||   |||||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  17694150 gagcaatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaattctaagttgtataattctaaaattgagtttagcatgtt 17694051  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||||  |||||| ||||||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  17694050 gtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattgatcgttaatagagtagaaaatccgttgaatttgtgtaga 17693962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 72 - 257
Target Start/End: Complemental strand, 40812909 - 40812728
Alignment:
Q  72 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 171  Q
    |||| ||||||||||||||||    || ||||||||||||||  |||||||||||||||||||||||| | |||| ||||||||||||||||||||||||    
T  40812909 caattttgtagagttcgatca----atctaaggtaagggtgggactaactttctctaattctaagttgcataattctgaaattgagtttagcatgttgta 40812814  T
Q  172 ggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  40812813 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtaga 40812728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 50348042 - 50348183
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaa 215  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50348042 ctaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaa 50348141  T
Q  216 taggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    | ||||||||||||||||||||||| ||||||||||||||||    
T  50348142 ttggttgttaatagagtagaaaatctgttgaatttgtgtaga 50348183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 44274470 - 44274313
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44274470 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 44274371  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
      ||||||||||||||| |||||||||||||||||||||| | |||||||||||||||    
T  44274370 tattttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtaga 44274313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 100 - 251
Target Start/End: Complemental strand, 10563760 - 10563609
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||| |||||  |||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  10563760 taaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagttatggaaatttgggaatta 10563661  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttg 251  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  10563660 ggttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg 10563609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 10311575 - 10311428
Alignment:
Q  104 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||||| ||| ||||||||||||||||||||||| |||||||  |||||||||    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 10311476  T
Q  204 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttg 251  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10311475 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 10311428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 73 - 249
Target Start/End: Complemental strand, 14508926 - 14508749
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    ||||||||||||| ||||||||||||||| ||||||||||   |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  14508926 aatcttgtagagtccgatcatctaatttatggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaggttagcatgttgtag 14508827  T
Q  173 gttgtagttatgggaatttggaaattaggtttt-gaagttgtaataggttgttaatagagtagaaaatccgttgaatt 249  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||| ||||||  | |||||||| |||| | ||||||    
T  14508826 gttgtagttatgggaattttggaattaggttttggaagttgtaattggttgtagaaagagtagataatctgatgaatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 257
Target Start/End: Original strand, 15931481 - 15931664
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    ||||||||||||| ||||||| ||||||||||||| ||||   |||||||||||||||||||||| ||| |||| |||||| |||||||||||||| |||    
T  15931481 aatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaattctaagt-gtataattctgaaatagagtttagcatgttttag 15931579  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||| |||||| | |||||||||| |||||||||||   || ||||||||||||||||| |||||||||||||||||    
T  15931580 gttgtagttatgagaattttggaattaggtttcgaagttgtaattaattattaatagagtagaaaattcgttgaatttgtgtaga 15931664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 35064566 - 35064657
Alignment:
Q  125 tctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaat 216  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtaat 35064657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 17541517 - 17541423
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagc 163  Q
    |||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  17541517 gagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagc 17541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 19568208 - 19568365
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| |   |||| || |||||||||||||||| ||||||||||| |||||    
T  19568208 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttttgggaatttgggaatta 19568307  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    || || ||||||||||| ||| |||   | |||||| ||||||||||||  |||||||    
T  19568308 gggttagaagttgtaattggtagttgtaatagtagagaatccgttgaatcggtgtaga 19568365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 33565139 - 33565022
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||||   |||||||||||||||||||||| ||| |||| ||||| |||| |||| || ||||||||||| |||| ||||||||||||||||    
T  33565139 taaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 33565040  T
Q  199 aggttttgaagttgtaat 216  Q
    |||||| |||||||||||    
T  33565039 aggtttagaagttgtaat 33565022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 87 - 222
Target Start/End: Complemental strand, 11563790 - 11563654
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgg 185  Q
    |||||||||||| ||||||||||||||  ||||| |||||||||||||||| ||| |||| || ||||  | |||| || |||||||||||||||| |||    
T  11563790 cgatcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagttttgg 11563691  T
Q  186 gaatttggaaattaggttttgaagttgtaataggttg 222  Q
    |||||||| ||||||||||  |||||||||| |||||    
T  11563690 gaatttgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 42323971 - 42324094
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  ||||| || | ||||| ||||||||| |||| ||||| |||| |||  ||||||||||||||||||| ||||||||||||||||    
T  42323971 taaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaatt 42324070  T
Q  199 aggttttgaagttgtaataggttg 222  Q
    ||| || ||||||||||| |||||    
T  42324071 agggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 9510916 - 9511062
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || |||| |||||||| ||||||||||  |||||    
T  9510916 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9511015  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttga 246  Q
    ||||| ||||||||||| |||||||   | ||||||||||| |||||    
T  9511016 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9511062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 9518891 - 9519037
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || |||| |||||||| ||||||||||  |||||    
T  9518891 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9518990  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttga 246  Q
    ||||| ||||||||||| |||||||   | ||||||||||| |||||    
T  9518991 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9519037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 35960928 - 35961045
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||   |||||||||||||||||| || ||| |||| ||||| |||| |||| || ||||||||||| |||| ||| ||||||||||||    
T  35960928 taaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttggaaatt 35961027  T
Q  199 aggttttgaagttgtaat 216  Q
    |||||| |||||||||||    
T  35961028 aggtttagaagttgtaat 35961045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 16050979 - 16050875
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| |||||||| ||||| || |||||| ||||||||| || | |||||  |||||    
T  16050979 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttgaggatttgagaatta 16050880  T
Q  200 ggttt 204  Q
    |||||    
T  16050879 ggttt 16050875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 35064681 - 35064737
Alignment:
Q  201 gttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  35064681 gttttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtaga 35064737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 5200277 - 5200327
Alignment:
Q  207 aagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 5200327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 15566823 - 15566744
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    |||||||| |||| ||||||| |||| ||| ||||||||||  |||||||||||||||||||||||||| |||| |||||    
T  15566823 aatcttgttgagtccgatcatgtaatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 222
Target Start/End: Original strand, 45530572 - 45530725
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgt 167  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||  ||||| ||   |||||||||| | ||  ||| || ||||||| |||| || ||    
T  45530572 gagcaatcttgtagagtccgatcatctaatttaaggtaa-gatgggactaacatttaataattctaag-tatatgattctgaaaattgaatttaacaggt 45530669  T
Q  168 tgtaggttgtagttatgggaatttg-gaaattaggttttgaagttgtaataggttg 222  Q
    ||| |||||||||| |||||||||| ||||||||| || ||||||||||| |||||    
T  45530670 tgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 13185947 - 13185834
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaatt-gagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  |||||||||||||||| |||||  || |||| | ||| | || |||| || |||||||||||||||| ||| ||||||| ||||    
T  13185947 taaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 13185848  T
Q  199 aggttttgaagttg 212  Q
    |||||| |||||||    
T  13185847 aggtttagaagttg 13185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 37039085 - 37038978
Alignment:
Q  117 taactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaattt-ggaaattaggttttgaagttgta 214  Q
    |||| |||| ||||| ||||||||| |||| ||||| |||  |||| ||||||||||||||||||| ||||||||| |||||||||| ||  ||||||||    
T  37039085 taacattctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaaattagggttaaaagttgta 37038986  T
Q  215 ataggttg 222  Q
    || |||||    
T  37038985 attggttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 50347604 - 50347647
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  50347604 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 50347647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 24177736 - 24177840
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  | |||||||||||||| ||||||||| |||| ||||| ||  ||||  | || ||||||||||||| ||| ||||||| |||||    
T  24177736 taaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaatta 24177835  T
Q  200 ggttt 204  Q
     ||||    
T  24177836 tgttt 24177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 49968858 - 49968981
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaat 197  Q
    |||||||||| ||||  ||||| ||| ||||||||||| ||||  ||| || ||||||| |||| || ||||||| |||||||| || |||||||| |||    
T  49968858 ttaaggtaagagtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaat 49968956  T
Q  198 taggttttgaagttgtaataggttg 222  Q
    |||||||  |||||||||| |||||    
T  49968957 taggtttataagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 11885560 - 11885658
Alignment:
Q  103 ggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattagg 201  Q
    |||||||||||  ||||||||||||||||||||||  || |||| || ||||||  |||| || |||||||||||||||| ||||||||||  |||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgagaattagg 11885658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 5200243 - 5200285
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaa 142  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  5200243 taaggtaagggtgggactaactttctctaattctaagttgtaa 5200285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 12509350 - 12509431
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  | ||| |||| ||||||||||||||| |||| ||||||||  |||| ||||| ||||| |||||||    
T  12509350 taaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagtt 12509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 15446868 - 15446909
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgta 141  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  15446868 taaggtaagggtgggactaactttctctaattctaagttgta 15446909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 6159484 - 6159445
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtg 112  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  6159484 aatcttgtagagtccgatcatctaatctaaggtaagggtg 6159445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 14641517 - 14641578
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||   || |||||||||||    
T  14641517 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggattagctttctctaat 14641578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 50350793 - 50350846
Alignment:
Q  77 ttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||| |||||||||||| ||||||||||||||  ||||| |||| ||||    
T  50350793 ttgtagagtccgatcatctaatctaaggtaagggtgggactaaccttctttaat 50350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 53646032 - 53646089
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    |||||||||||||  ||||||||||| ||||||||||||||  ||||| |||| ||||    
T  53646032 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaaccttctttaat 53646089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 36528919 - 36528851
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||   |||||||||||||||||||||  || |||| ||| |||| ||||| ||||||    
T  36528919 taaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggtttaacatgtt 36528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 3e-81; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 24436731 - 24436543
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  24436731 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaactttctcgaattctaagttgtataattctgaaattgagtttagcatgtt 24436632  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  24436631 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtaga 24436543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 24780809 - 24780997
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||      
T  24780809 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgaa 24780908  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24780909 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 24780997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 5031098 - 5031286
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| | |||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  5031098 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 5031197  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  5031198 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaattcgttgaatttgtgtaga 5031286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 72 - 257
Target Start/End: Complemental strand, 9976009 - 9975824
Alignment:
Q  72 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 171  Q
    |||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  9976009 caatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 9975910  T
Q  172 ggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  9975909 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagacaatccgctgaatttgtgtaga 9975824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 87 - 257
Target Start/End: Complemental strand, 17307551 - 17307381
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatggg 186  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  17307551 cgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg 17307452  T
Q  187 aatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  17307451 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtaga 17307381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 73 - 252
Target Start/End: Original strand, 22251421 - 22251600
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    |||||||||||||  |||||||||||||||||||||||||   |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  22251421 aatcttgtagagtctgatcatctaatttaaggtaagggtgaaactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 22251520  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgt 252  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  22251521 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 24516238 - 24516081
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  24516238 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 24516139  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24516138 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 24516081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 69 - 253
Target Start/End: Original strand, 2523716 - 2523900
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| | |||||||||||| ||||||    
T  2523716 gagcaatcttgtaaagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattcttaaattgagtttaacatgtt 2523815  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtg 253  Q
    |||||||||| |||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||| |||||||||||||    
T  2523816 gtaggttgtatttatgggaatttggaaattaggtttttaaattgtaattggttattaatagagtagaaaattcgttgaatttgtg 2523900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 40912372 - 40912215
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40912372 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40912273  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||    
T  40912272 ggttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtaga 40912215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 257
Target Start/End: Original strand, 19201187 - 19201357
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatggg 186  Q
    |||||||||||  |||| ||||||||   |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||| ||    
T  19201187 cgatcatctaacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttatagg 19201286  T
Q  187 aatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  19201287 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtaga 19201357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 37270747 - 37270600
Alignment:
Q  104 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaagtt 37270648  T
Q  204 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttg 251  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37270647 ttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg 37270600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 27484514 - 27484634
Alignment:
Q  137 ttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaa 236  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||    
T  27484514 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaa 27484613  T
Q  237 aatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||||||    
T  27484614 aatccgttgaatttgtgtaga 27484634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 36841268 - 36841159
Alignment:
Q  148 tgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaa 247  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||    
T  36841268 tgaaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgttaatagagtagaaaatatgttgaa 36841169  T
Q  248 tttgtgtaga 257  Q
    ||||||||||    
T  36841168 tttgtgtaga 36841159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 25142256 - 25142133
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  |||||||||||||||||||||| ||| |||| ||||| |||| |||| || |||||||||||||||| ||||||||||| ||||    
T  25142256 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 25142157  T
Q  199 aggttttgaagttgtaataggttg 222  Q
    |||||| ||||||||||| |||||    
T  25142156 aggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 224
Target Start/End: Complemental strand, 22502050 - 22501897
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgta 171  Q
    ||||||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||  |  |||| ||| |||||  |||| ||||||||     
T  22502050 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22501951  T
Q  172 ggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttgtt 224  Q
    |||||||||| |  |||||| |||||||||| || |||||||| || |||||||    
T  22501950 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 224
Target Start/End: Complemental strand, 22509984 - 22509831
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgta 171  Q
    ||||||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||  |  |||| ||| |||||  |||| ||||||||     
T  22509984 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22509885  T
Q  172 ggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttgtt 224  Q
    |||||||||| |  |||||| |||||||||| || |||||||| || |||||||    
T  22509884 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 27852747 - 27852605
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgt 167  Q
    ||||| ||||||||||| ||||||    || ||||||||||||||  |||||||||||||||||||||| ||| |||| ||||| |||| |||| || ||    
T  27852747 gagcattcttgtagagtccgatca----atctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagt 27852652  T
Q  168 tgtaggttgtagttatgggaatttggaaattaggttttgaagttgta 214  Q
    |||||||||| ||| ||||||||||| |||||| ||| |||||||||    
T  27852651 tgtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 224
Target Start/End: Complemental strand, 357933 - 357809
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| | | ||||||| |||||    
T  357933 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 357834  T
Q  200 ggttttgaagttgtaataggttgtt 224  Q
    ||||| ||||||||||| |||||||    
T  357833 ggtttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 1383545 - 1383667
Alignment:
Q  102 aggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattagg 201  Q
    |||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| ||||||| |||||||    
T  1383545 aggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattagg 1383644  T
Q  202 ttttgaagttgtaataggttgtt 224  Q
    ||| ||||||||||| |||||||    
T  1383645 tttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 3539889 - 3539766
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaatt-gagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  |||||||||||||||| ||||| ||| |||| ||||| | || |||| || |||||||||||||||| | ||||||||  ||||    
T  3539889 taaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgagaatt 3539790  T
Q  199 aggttttgaagttgtaataggttg 222  Q
    |||||| ||||||||||| |||||    
T  3539789 aggtttagaagttgtaattggttg 3539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 44072609 - 44072509
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||||||||   ||||||||| |||||||||||| |||  ||||||||| |||| ||||||| |||||||||||||||| ||||||||||||||||    
T  44072609 taaggtaagggtgagactaactttcactaattctaagt-gtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgggaatttggaaatt 44072511  T
Q  199 ag 200  Q
    ||    
T  44072510 ag 44072509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 14179697 - 14179758
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  ||||| |||| ||||    
T  14179697 gagcaatcttgtagagttcgatcatctaatataaggtaagggtgggactaaccttctttaat 14179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 36841310 - 36841267
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  36841310 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 36841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 149474 - 149531
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||| |||||||||||| ||||||||||||||  ||| |||||||||||    
T  149474 aatcttgtagagtccgatcatctaatctaaggtaagggtggaactagctttctctaat 149531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 20916390 - 20916346
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 113  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||    
T  20916390 gagcaatcttgtagagctcgatcatctaatttaaagtaagggtgg 20916346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 21369376 - 21369332
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 113  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||    
T  21369376 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgg 21369332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 25046170 - 25046088
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| ||| |||||  |||| ||||||||||| |||||||    
T  25046170 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagtt 25046088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 19358893 - 19358820
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttg 222  Q
    ||||||| |||| || ||||| |||||||||| ||||||||| |||||||||| || ||||||||||| |||||    
T  19358893 aaattgaatttaacaagttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 31521252 - 31521209
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 112  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||    
T  31521252 gagcaatcttgtacagtccgatcatctaatttagggtaagggtg 31521209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 22260040 - 22259975
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaat 216  Q
    ||||||| |||| || |||||||||||||||| | ||||||||| ||||||| || |||||||||||    
T  22260040 aaattgaatttaacaggttgtaggttgtagtt-taggaatttgggaattaggcttagaagttgtaat 22259975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 24884453 - 24884399
Alignment:
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgt 223  Q
    ||||||||||||| ||  ||||||| |||||||||| ||||||||||| ||||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 21080969 - 21081006
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  21080969 taaggtaagggtgggactaactttctctaattctaagt 21081006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 5986229 - 5986125
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  | ||| |||| ||||||||||||||| |||| || ||||||  |||| || |||||||||| ||||| || | |||||  ||||    
T  5986229 taaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaatt 5986130  T
Q  199 aggtt 203  Q
    |||||    
T  5986129 aggtt 5986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 14183436 - 14183496
Alignment:
Q  70 agcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||| || | | |||||||||||||||||||||||||||  ||||| |||| ||||    
T  14183436 agcaatcttataaaatccgatcatctaatttaaggtaagggtgggactaaccttctttaat 14183496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 58829 - 58641
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  58829 gagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttgtacaattctgaaattgagtttagcatgtt 58730  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  58729 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtataga 58641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 72 - 257
Target Start/End: Original strand, 440 - 625
Alignment:
Q  72 caatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgta 171  Q
    ||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  440 caatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 539  T
Q  172 ggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  540 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaataagttgaatttgtgtaga 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 145; Significance: 2e-76; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 32077 - 31889
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  32077 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 31978  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
     |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  31977 ataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtaga 31889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 37384 - 37196
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  37384 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 37285  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
     |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  37284 ataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtaga 37196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 73 - 255
Target Start/End: Complemental strand, 77766 - 77584
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    |||||||||||||  ||||||||||| |||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  77766 aatcttgtagagtctgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 77667  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  77666 gttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 77584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 11251 - 11431
Alignment:
Q  77 ttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttg 176  Q
    ||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  11251 ttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtatatttctgaaattgagtttagcatgttgtaggttg 11350  T
Q  177 tagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11351 tagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 11431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 70 - 257
Target Start/End: Complemental strand, 1287 - 1100
Alignment:
Q  70 agcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttg 169  Q
    |||||| ||||||| | |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  1287 agcaattttgtagaatccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttg 1188  T
Q  170 taggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  1187 taggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtaga 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 73 - 257
Target Start/End: Original strand, 12506 - 12690
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    ||||||||||||| ||||||||||||  |||||||||||||   ||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||    
T  12506 aatcttgtagagtccgatcatctaatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgttatag 12605  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  12606 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtataga 12690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 103 - 257
Target Start/End: Complemental strand, 5432 - 5278
Alignment:
Q  103 ggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggt 202  Q
    |||||||||||  |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 5333  T
Q  203 tttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||    
T  5332 tttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtaga 5278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 70 - 257
Target Start/End: Complemental strand, 34421 - 34234
Alignment:
Q  70 agcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttg 169  Q
    |||||| ||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||| ||||  |||| ||||||||||||||||||||||    
T  34421 agcaattttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaatttgtttaattctgaaattgagtttagcatgttg 34322  T
Q  170 taggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  34321 taggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtaga 34234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 6002 - 5921
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| ||||||||| |||| ||||||||||| |||||||    
T  6002 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagtt 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 190 - 33
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  190 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 91  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  90 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 33  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 21762 - 21950
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||  |||| ||||||||||||||||||||| | || ||||||||| |||||||||||    
T  21762 gagcaatcttgtagagtccgatcatctaatttaaggtaatggtgggactaaatttctctaattctaagttgtatagttctgaaattgaatttagcatgtt 21861  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||  ||||||||||||||||    
T  21862 gtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtaaaaaataagttgaatttgtgtaga 21950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 570 - 413
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  570 taaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaatta 471  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  470 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 69 - 213
Target Start/End: Original strand, 78154 - 78298
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  78154 gagcaatcttgtagagtacgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 78253  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  78254 gtaggttgtagttatgggaatttggaaattaggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 73 - 257
Target Start/End: Original strand, 21300017 - 21300201
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtag 172  Q
    |||||||||||||  ||||||||||| ||||||||||||||  |||||||||||||||| ||||||||| |||| ||||||| |||||||||||||||||    
T  21300017 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaattaagtttagcatgttgtag 21300116  T
Q  173 gttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    || |||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||    
T  21300117 gtagtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgtgtaga 21300201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 7485050 - 7484903
Alignment:
Q  104 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||||||||  ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||  |||||||||    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 7484951  T
Q  204 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttg 251  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7484950 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 7484903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 19921727 - 19921533
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtc------ctaactttctctaattctaagttgtaaaattttgaaattgagtttag 162  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||        ||| |||||||||||||||||||||| |||| ||||||||||||||     
T  19921727 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggagtgggactacctttctctaattctaagttgtataattctgaaattgagtttaa 19921628  T
Q  163 catgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||  |||||||||||||||||||||| ||||||||||||||||    
T  19921627 catgttgtaggttgtaattatggaaatttgggaattaggttttgaagttataattagttgttaatagagtagaaaatctgttgaatttgtgtaga 19921533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 20566598 - 20566449
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   ||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||        |||||    
T  20566598 taaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg--------aatta 20566507  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||    
T  20566506 ggttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtaga 20566449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 91 - 249
Target Start/End: Complemental strand, 31622178 - 31622028
Alignment:
Q  91 catctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatt 190  Q
    |||||||| ||||||||||||||   ||||||||||||||| || |||||| |||| ||||||||||||||||||||||| | |||||        ||||    
T  31622178 catctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgta--------aatt 31622087  T
Q  191 tggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatt 249  Q
    ||| |||||||||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  31622086 tgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatt 31622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 224
Target Start/End: Original strand, 36508628 - 36508757
Alignment:
Q  95 taatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgga 194  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| |||||||     
T  36508628 taatttaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttttggaaatttggg 36508727  T
Q  195 aattaggttttgaagttgtaataggttgtt 224  Q
    ||||| |||| ||||||||||| |||||||    
T  36508728 aattatgtttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 23199176 - 23199237
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||    
T  23199176 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaat 23199237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 224
Target Start/End: Complemental strand, 31457012 - 31456888
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   |||||||||||||||| ||||| |||  ||| ||||| ||  |||| ||    ||||||||||||| ||| |||||||||||||    
T  31457012 taaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaatta 31456913  T
Q  200 ggttttgaagttgtaataggttgtt 224  Q
    ||||| ||||||||||| |||||||    
T  31456912 ggtttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 21617928 - 21618041
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  ||||||||||||||||||||||  || || | | ||| |||| |||| || |||||||||||||||| ||||||||||  ||||    
T  21617928 taaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttgggaatttgagaatt 21618027  T
Q  199 aggttttgaagttg 212  Q
    ||| || |||||||    
T  21618028 agggttagaagttg 21618041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 22111881 - 22111764
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||| ||||||||||   ||||||||||||||| |  |||||| |||||||||||||||||||||||||||| | ||||   | || |||||||  ||||    
T  22111881 ttaacgtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgttgtttgtgaatttgcgaatttgagaatt 22111782  T
Q  199 aggttttgaagttgtaat 216  Q
    ||||||| |||| |||||    
T  22111781 aggttttcaagtcgtaat 22111764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 21398613 - 21398674
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||   || |||||||||||    
T  21398613 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggattagctttctctaat 21398674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 10954141 - 10954060
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  ||||| |||  ||||||||||||||  |||| ||||||||  |||| ||||||||||| |||||||    
T  10954141 taaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagtt 10954060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 20469176 - 20469281
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  ||||||||||||||||||||||  || || | || ||||||  |||| || |||||||||||||||| |||| | |||  ||||    
T  20469176 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggacttgagaatt 20469275  T
Q  199 aggttt 204  Q
    ||||||    
T  20469276 aggttt 20469281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 21405678 - 21405751
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaattt-ggaaattaggttttgaagttgtaataggttg 222  Q
    ||||||| |||| || ||||| |||||||||| ||||||||| |||||||||| || ||||||||||| |||||    
T  21405678 aaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 6551290 - 6551342
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    |||||||||||||   |||||||||||||||||||||||||| |||| |||||    
T  6551290 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 6551342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 266091 - 266053
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagt 137  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  266091 ttaaggtaagggtgggactaactttctctaattctaagt 266053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 17876186 - 17876132
Alignment:
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgt 223  Q
    ||||||||||||| ||  ||||||| |||||||||| ||||||||||| ||||||    
T  17876186 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 17011780 - 17011743
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  17011780 taaggtaagggtgggactaactttctctaattctaagt 17011743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 32607285 - 32607346
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||| ||||||  |||| ||||||| ||||||||||||||  ||| |||||||||||    
T  32607285 gagcaatctcgtagagaccgattatctaatctaaggtaagggtgggactagctttctctaat 32607346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 696 - 853
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||| ||||||  |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  696 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 795  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  796 ggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtaga 853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 3234 - 3077
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||| |  |||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||    
T  3234 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagttatgggaatttgggaatta 3135  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3134 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 3077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 2558 - 2459
Alignment:
Q  158 tttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 2459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 13392 - 13549
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  13392 taaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaatttgggaatta 13491  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  13492 ggttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtaga 13549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 168999 - 169156
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||| ||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  168999 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 169098  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
T  169099 ggttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtaga 169156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 143667 - 143506
Alignment:
Q  96 aatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaa 195  Q
    |||||||||||||||||   |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||   ||||||| |    
T  143667 aatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattttaatttggga 143568  T
Q  196 attaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  143567 attatgttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtaga 143506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 146775 - 146618
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||| ||||||  ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  146775 taaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 146676  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||    
T  146675 ggttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtaga 146618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 24100 - 24235
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  24100 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 24199  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttt 204  Q
    ||||||||||||||||||||||||| ||||||||||    
T  24200 gtaggttgtagttatgggaatttgggaattaggttt 24235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 1217 - 1060
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   ||||||||  |||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  1217 taaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaatta 1118  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  1117 ggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtaga 1060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 110; Significance: 2e-55; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 87 - 257
Target Start/End: Original strand, 328275 - 328447
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattct--aagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatg 184  Q
    |||||||||||  ||||||||||||||  ||||||||||||||||||  |||||||| |||| |||||||||||||||||||||| || |||||||||||    
T  328275 cgatcatctaacctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatg 328374  T
Q  185 ggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    | ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  328375 gaaatttgggaattaggtttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtaga 328447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 253
Target Start/End: Complemental strand, 75839 - 75691
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||| ||||||||||   ||||||||||||||  || |||||| |||| ||||||||||| ||||||||||| | |||||  | || |||||||| ||||    
T  75839 ttaacgtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaatt 75740  T
Q  199 aggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtg 253  Q
    |||||      ||||||| ||||||||||||| |||||||||| |||||||||||    
T  75739 aggtt------ttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 72910 - 72841
Alignment:
Q  186 gaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    |||||||  |||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  72910 gaatttgtgaattaggttttgaagttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 110227 - 110133
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttg 192  Q
    |||| |||||||||   ||||||||||||||||||||||  || |||| ||||| |||| |||| || |||||||||||||||| |||| |||||    
T  110227 ttaacgtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttggggatttg 110133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 69 - 257
Target Start/End: Complemental strand, 79132 - 78959
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  79132 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 79033  T
Q  169 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
           |||||||||||        |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||    
T  79032 -------gtagttatggg--------aattaggttttgaagttgtaattggttgttaataaagtagaaaatccattgaatttgtgtaga 78959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 100 - 239
Target Start/End: Original strand, 29573 - 29711
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  |||||||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  29573 taaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgggaatttgggaatta 29672  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaat 239  Q
    ||||||||||||||||| |||||| ||||| |||||||||    
T  29673 ggttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 224
Target Start/End: Complemental strand, 21663 - 21539
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||| ||||||||||||||||||||||  |||  |||| ||  |||| ||  | |||| |||||||| ||| ||||||| |||||    
T  21663 taaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaatttgggaatta 21564  T
Q  200 ggttttgaagttgtaataggttgtt 224  Q
     |||| ||||||||||| |||||||    
T  21563 tgtttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 35542 - 35418
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  ||||| ||||||||||| |||||    
T  35542 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttttgggaatttgggaatta 35445  T
Q  200 ggttttgaagttgtaataggttgttaa 226  Q
    ||||||||||| ||||| |||||||||    
T  35444 ggttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 2638 - 2524
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgtt 168  Q
    ||||||||| ||||||  |||||||||||| || |||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  2638 gagcaatctcgtagagaccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 2539  T
Q  169 gtaggttgtagttat 183  Q
    |||||||||||||||    
T  2538 gtaggttgtagttat 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 19805 - 19656
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   || ||||||||||||||||||||||| |||| | ||||||||||||||| |||||||| |||        |||||||| |||||    
T  19805 taaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgt--------gaatttgggaatta 19714  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  19713 ggtttttaagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtaga 19656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 112966 - 113124
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg--aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaat 197  Q
    |||| |||||||||  ||||||||||||||||||||||  || || | ||  ||||||| |||| || ||||||||||||| || ||||||||||| |||    
T  112966 taagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttgggaatttgggaat 113065  T
Q  198 taggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    ||||||| ||||||||||| ||||||| | | ||||||||||  |||||||| |||||||    
T  113066 taggtttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtaga 113124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 81569 - 81503
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaat 216  Q
    ||||||| |||| || |||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  81569 aaattgaatttaacaggttgtaggttgtagttttgggaatttgggaattaggtttagaagttgtaat 81503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 117807 - 117844
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  117807 taaggtaagggtgggactaactttctctaattctaagt 117844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 255
Target Start/End: Complemental strand, 2941 - 2793
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||   ||||||||||||||| || |||||| |||| ||||||||||||||||||||||| | ||||        |||||||  |||||    
T  2941 taaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgtgaatta 2850  T
Q  200 ggttttgaagttgt-aataggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    ||||||||| | || ||| ||||||||||||| |||||||||| |||||||||||||    
T  2849 ggttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgta 2793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 213
Target Start/End: Original strand, 4709 - 4823
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  |||||||||||||||||||||| ||| |||| || ||||||| |||| || ||||||||||| ||||   ||||||||||||||    
T  4709 taaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttggaaatt 4808  T
Q  199 aggttttgaagttgt 213  Q
    |||||| ||||||||    
T  4809 aggtttagaagttgt 4823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 224
Target Start/End: Original strand, 6688 - 6809
Alignment:
Q  103 ggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggt 202  Q
    |||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || || ||||||||||||| ||| ||||| | ||||||||    
T  6688 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 6787  T
Q  203 tttgaagttgtaataggttgtt 224  Q
    || ||||||||||| |||||||    
T  6788 ttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 10755 - 10910
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || |||||||||| ||||| ||||||||||| |||||    
T  10755 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttgggaatta 10852  T
Q  200 ggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtaga 257  Q
    || || ||||||||||| |||||||   | |||||| ||||  ||||||| |||||||    
T  10853 gggttagaagttgtaattggttgttgtaatagtagagaatctattgaattggtgtaga 10910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 5045 - 5120
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggtt 175  Q
    ||||||||||||||  ||||||||||||||||||||||||||  ||| ||||| ||  |||| || ||||||||||    
T  5045 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaagttgtaggtt 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 19290 - 19207
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||||||  |||||||||||||||||||||||||| |||| |||||    
T  19290 gagcaatcttgtagagtccgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 17913 - 17992
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    ||||||||||| | |||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||| |||||    
T  17913 aatcttgtagaatccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 1045 - 1175
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagttatgg 185  Q
    |||||||||||| ||||||||||||||  |||||||||||| |||||||||  || |||| || ||||||| |||| || ||||||||||| |||| ||     
T  1045 cgatcatctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagttttga 1144  T
Q  186 gaatttggaaattaggttttgaagttgtaat 216  Q
    |||||||| | ||||| || |||||||||||    
T  1145 gaatttgggatttagggttagaagttgtaat 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 255
Target Start/End: Complemental strand, 5310 - 5167
Alignment:
Q  104 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||||||||   ||||||||||||||  || |||||| |||| ||||||||||||| ||||||||| | ||||        |||||||| ||||| |||    
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattacgtt 5219  T
Q  204 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    ||||||||||||| ||||||||||||| |||||||||| |||| ||| ||||    
T  5218 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 5167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 255
Target Start/End: Complemental strand, 11430 - 11287
Alignment:
Q  104 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||||||||   ||||||||||||||  || ||||||  ||| ||||||||||||| ||||||||| | ||||        |||||||| |||||||||    
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattaggtt 11339  T
Q  204 ttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 255  Q
    ||||||||||||| ||||||||||||| |||||||||| |||| ||| ||||    
T  11338 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 11287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 19737 - 19605
Alignment:
Q  121 tttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggt 220  Q
    ||||||||||  || ||| || |||| ||||||||||||||||||||||| | ||||   | || |||||||  ||||||||| |||||||||||| | |    
T  19737 tttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaattaggttatgaagttgtaattgat 19638  T
Q  221 tgttaatagagtagaaaatccgttgaatttgtgt 254  Q
    |||||||| | |||||||||| ||||||||||||    
T  19637 tgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 5537 - 5454
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    ||||||||| ||||||  | |||||||||| ||||||||||||||  ||| |||||||||||  | ||||||| |||| |||||    
T  5537 gagcaatctcgtagagaccaatcatctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaa 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 224
Target Start/End: Complemental strand, 16650 - 16532
Alignment:
Q  106 aagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtttt 205  Q
    ||||||||  |||| ||| |||||||||||||||||  ||| ||||| ||  |||| ||||| ||||||||||||| ||| ||||||| ||||||||||     
T  16650 aagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattaggttta 16551  T
Q  206 gaagttgtaataggttgtt 224  Q
    ||||||||||| |||||||    
T  16550 gaagttgtaattggttgtt 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 61821 - 61900
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    ||||||||||| | |||||||||||| |||||||||||||   |||||||||||||||||||||||||| |||| |||||    
T  61821 aatcttgtagaatccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 61900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 5716 - 5655
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||    
T  5716 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaat 5655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 2020 - 2143
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaat 197  Q
    ||||| |||||||||   |||| ||| |||||||||||| |||  ||||||||| |||| |||| ||||||||||||||||||| ||| ||||||| |||    
T  2020 ttaagctaagggtgggattaaccttcactaattctaagt-gtatgattttgaaaattgaatttaacatgttgtaggttgtagttttggaaatttgggaat 2118  T
Q  198 taggttttgaagttgtaataggttg 222  Q
    |||||||  |||||||||| |||||    
T  2119 taggtttataagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 10851 - 10742
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||| ||||||||||   ||||||||||||||| || |||||| |||| ||||||||||||||||||||||| | ||||        |||||||| ||||    
T  10851 ttaatgtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgggaatt 10760  T
Q  199 aggttttgaagttgtaat 216  Q
    ||||||||||||||||||    
T  10759 aggttttgaagttgtaat 10742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 11030 - 10969
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||| |  ||||||||||| ||||||||||||||  ||| |||||||||||    
T  11030 gagcaatcttgtagaatctgatcatctaatataaggtaagggtggaactagctttctctaat 10969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 8694 - 8571
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaattt-ggaaat 197  Q
    ||||||||||||||  ||||| ||| |||||||||||| |||  ||| ||||| |||| |||| || |||||||||||||||| ||||||||| ||||||    
T  8694 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaaat 8596  T
Q  198 taggttttgaagttgtaataggttg 222  Q
    |||| || ||||||||||| |||||    
T  8595 tagggttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 7329 - 7205
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgg-aaat 197  Q
    |||||| |||||||  ||||| |||| ||||||||||||||| |||| ||||| |||  |||  ||||||||||||| ||||| ||||||||||| ||||    
T  7329 taaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaat 7230  T
Q  198 taggttttgaagttgtaataggttg 222  Q
    |||| || ||||||||||| |||||    
T  7229 tagggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 26638 - 26779
Alignment:
Q  104 gtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggt 202  Q
    ||||||||||   ||||||||| ||||| || |||||| |||| ||||| |||||||||||||||||| | ||||        |||||||| ||||||||    
T  26638 gtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgttgtttgt--------gaatttgggaattaggt 26729  T
Q  203 tttgaagttgtaata-ggttgttaatagagtagaaaatccgttgaatttg 251  Q
    |||||| | |||||  |||||||||||||||||||||||| |||||||||    
T  26730 tttgaattagtaatttggttgttaatagagtagaaaatccattgaatttg 26779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 135504 - 135625
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||||||  ||||| ||| |||||||||||| ||| |||| ||||| |||| |||| || |||||||||||||||| ||||||||||| ||||    
T  135504 taaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 135602  T
Q  199 aggttttgaagttgtaataggtt 221  Q
    ||  || ||||||| ||| ||||    
T  135603 agagttagaagttgaaattggtt 135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 12399 - 12323
Alignment:
Q  148 tgaaattgagtttagcatg-ttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaataggttgt 223  Q
    ||||||||| |||| |||| ||||||||||||||| ||| ||||||  |||||||||| ||||||||||||||||||    
T  12399 tgaaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 18613 - 18693
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaa-aattttgaaa 152  Q
    ||||||||||||| |||||||||||| ||||||||||||||  ||| |||||||||||  | |||||||| ||||||||||    
T  18613 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtaataattttgaaa 18693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 106051 - 106175
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||   ||||||||||||||||||||||||||  |||  |||| ||  |||| || || ||||  ||||||| ||| ||||||| |||||    
T  106051 taaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttttggaaatttgggaatta 106150  T
Q  200 ggttttgaagttgtaataggttgtt 224  Q
    ||||| || |||||||| |||||||    
T  106151 ggtttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 6620 - 6686
Alignment:
Q  187 aatttggaaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtg 253  Q
    ||||||| ||||||||||||| || ||||| ||||||||||||||||||| ||||  ||||||||||    
T  6620 aatttgggaattaggttttgatgtcgtaattggttgttaatagagtagaagatccaatgaatttgtg 6686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 222
Target Start/End: Original strand, 3053 - 3174
Alignment:
Q  101 aaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 199  Q
    |||||||||||||  ||||| |||  ||||||||||| |||  ||| ||||| |||| |||| || |||||||||||||||| ||||||||| | |||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttaggaatta 3151  T
Q  200 ggttttgaagttgtaataggttg 222  Q
    || || ||||||||||| |||||    
T  3152 gggttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 2187 - 2252
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa 152  Q
    |||||||||||  ||||||||||||||  |||| ||||||||||||||||||||| |||| |||||    
T  2187 cgatcatctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 2423 - 2484
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||  ||| |||||||||||    
T  2423 gagcaatcttgtaaagtccgaacatctaatttaaggtaagggtgggactagctttctctaat 2484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 20086 - 20201
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    ||||||||||| ||  ||||| ||| |||||||||||| ||| |||| ||||| |||| |||| || |||||||||| ||||| ||||||||||| ||||    
T  20086 taaggtaagggcgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttatagtt-tgggaatttgggaatt 20183  T
Q  199 aggttttgaagttgtaat 216  Q
    | |||| |||||||||||    
T  20184 atgtttagaagttgtaat 20201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 23861 - 23922
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||   ||| |||||||||||    
T  23861 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgagactagctttctctaat 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 67173 - 67060
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggaaatt 198  Q
    |||||||| |||||  ||||||||||||||||| |||| ||| |||| ||||| |||  |||| ||  ||||||||||||||| | ||||||||| |||     
T  67173 taaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttaggaatttgggaata 67074  T
Q  199 aggttttgaagttg 212  Q
    |||||| |||||||    
T  67073 aggtttagaagttg 67060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 13525 - 13565
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtgg 113  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  13525 aatcttgtagagtccgatcatctaatttaaggtaagggtgg 13565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 60931 - 60843
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||| |||| ||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||| || | |||||  |||||||||    
T  60931 ctaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaattaggtt 60843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 5292 - 5351
Alignment:
Q  87 cgatcatctaatttaaggtaagggtggtcctaactttctctaattctaagttgtaaaatt 146  Q
    |||||||||||  ||||||||||||||  |||||||||||||||| ||||||||| ||||    
T  5292 cgatcatctaacctaaggtaagggtgggactaactttctctaattttaagttgtataatt 5351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 126320 - 126407
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||||||||||||||||||||||||  ||| ||||||||  |||| || ||||||| |||||||| || | |||||  |||||||||    
T  126320 ctaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggatttgagaattaggtt 126407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 1863 - 1917
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgt 170  Q
    |||||||||||||||||||||| ||| |||| ||||||||| |||| ||||||||    
T  1863 ctaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 20006 - 19924
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttg-aaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  ||||||||||||||||||||||  || |||| || ||||||  |||| || ||||||||||||||||    
T  20006 taaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt 19924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 28395 - 28441
Alignment:
Q  166 gttgtaggttgtagttatgggaatttggaaattaggttttgaagttg 212  Q
    |||||||||||||||| ||||||||||||||||||| || |||||||    
T  28395 gttgtaggttgtagttttgggaatttggaaattagggttagaagttg 28441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 15324 - 15283
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgta 141  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  15324 taaggtaagggtgggactaactttctctaattctaagttgta 15283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 5712 - 5761
Alignment:
Q  105 taagggtggtcctaactttctctaattctaagttgtaaaattttgaaatt 154  Q
    |||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 11232 - 11193
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtg 112  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  11232 aatcttgtagagtccgatcatctaatctaaggtaagggtg 11193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 4684 - 4618
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaat 216  Q
    ||||||| |||| || ||| |||||||| ||| ||||||||||  |||||||||| |||||||||||    
T  4684 aaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgtaat 4618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 4992 - 4910
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| |||| ||| | |||  |||| ||||||||||| |||||||    
T  4992 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagtt 4910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 195 - 233
Alignment:
Q  99 ttaaggtaagggtggtcctaactttctctaattctaagt 137  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  195 ttaaggtaagggtgggactaactttctctaattctaagt 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 158888 - 158934
Alignment:
Q  166 gttgtaggttgtagttatgggaatttggaaattaggttttgaagttg 212  Q
    |||||||||||||||| ||||||||||| ||||||| || |||||||    
T  158888 gttgtaggttgtagttttgggaatttgggaattagggttagaagttg 158934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 398614 - 398532
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||  ||||| |||| |||||||| |||||| |||| ||| |||||  |||| ||||||||||| |||||||    
T  398614 taaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagtt 398532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 2960 - 2903
Alignment:
Q  73 aatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    |||||||||||||  |||||| |||| ||||||||||||||  ||| |||||||||||    
T  2960 aatcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaat 2903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 5081 - 5044
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagt 5044  T

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Target: scaffold0436 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 9012 - 8975
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  9012 taaggtaagggtgggactaactttctctaattctaagt 8975  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 5081 - 5044
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagt 5044  T

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Target: scaffold0138 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 21149 - 21112
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  21149 taaggtaagggtgggactaactttctctaattctaagt 21112  T

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Target: scaffold0138; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 34164 - 34127
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  34164 taaggtaagggtgggactaactttctctaattctaagt 34127  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 69853 - 69890
Alignment:
Q  100 taaggtaagggtggtcctaactttctctaattctaagt 137  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  69853 taaggtaagggtgggactaactttctctaattctaagt 69890  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 96434 - 96369
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    |||||||||||||||||| |||||||  ||| ||||| ||  |||| || ||||||||||||||||    
T  96434 ctaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagtt 96369  T

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Target: scaffold0589 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 4421 - 4333
Alignment:
Q  116 ctaactttctctaattctaagttgtaaaattttga-aattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggtt 203  Q
    ||||| |||| ||||||||||||||| |||| ||| || ||  |||| ||||||||||||||||||| || | |||||  |||||||||    
T  4421 ctaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaattaggtt 4333  T

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Target: scaffold0414 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 11130 - 11190
Alignment:
Q  70 agcaatcttgtagagttcgatcatctaatttaaggtaagggtggtcctaactttctctaat 130  Q
    ||||||||| ||| || |||||| |||||||||||||||| |||  ||| |||||||||||    
T  11130 agcaatcttttagtgtccgatcacctaatttaaggtaaggatgggactagctttctctaat 11190  T

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Target: scaffold0125 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 28634 - 28590
Alignment:
Q  69 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgg 113  Q
    ||||||||||||||||| | |||||||||| ||||||||| ||||    
T  28634 gagcaatcttgtagagtcctatcatctaatctaaggtaagagtgg 28590  T

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