View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9661A_low_130 (Length: 247)
Name: NF9661A_low_130
Description: NF9661A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9661A_low_130 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 43467335 - 43467102
Alignment:
| Q |
1 |
tgctgtattacacatcaactacagagtacagatatcattgttacactaacatacaaaccatcatgctgcttgctttacactatttatcctttagttcaca |
100 |
Q |
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| T |
43467335 |
tgctgtattacacatcaactacagagtacagatatcattgttacactaacatacaatccatcatgctgcttgctttgcactatttaacctttagttcaca |
43467236 |
T |
|
| Q |
101 |
aaacatgtcataccagaaaaatagattttcttacaattaatctcttgaccgcagcctttccacgtatttggcgagtaaaatatcagttgaacaacacaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43467235 |
aaacatgtcataccagaaaaatagattttcttacaattaatctcttgaccgcagactttccacgtatttggcgagtaaaatatcagttgaacaacacaaa |
43467136 |
T |
|
| Q |
201 |
tggaaacagcggttccaagaacatgatgtccatc |
234 |
Q |
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||||||||||||||||||||||||||||| |||| |
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| T |
43467135 |
tggaaacagcggttccaagaacatgatgtacatc |
43467102 |
T |
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