View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9661A_low_211 (Length: 221)

Name: NF9661A_low_211
Description: NF9661A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9661A_low_211
NF9661A_low_211
[»] chr8 (28 HSPs)
chr8 (19-221)||(21382107-21382309)
chr8 (19-221)||(21098794-21098995)
chr8 (19-221)||(21104115-21104316)
chr8 (19-221)||(23911455-23911655)
chr8 (19-221)||(8314481-8314683)
chr8 (19-221)||(8322846-8323048)
chr8 (19-221)||(21843524-21843726)
chr8 (19-221)||(20038981-20039182)
chr8 (19-221)||(21939996-21940199)
chr8 (19-221)||(17620761-17620961)
chr8 (19-221)||(16418620-16418823)
chr8 (19-221)||(23454951-23455154)
chr8 (19-199)||(24034049-24034230)
chr8 (30-221)||(14352181-14352372)
chr8 (19-209)||(21538573-21538765)
chr8 (19-131)||(20712537-20712649)
chr8 (19-75)||(11346953-11347009)
chr8 (19-75)||(19767684-19767740)
chr8 (19-75)||(22370102-22370158)
chr8 (19-70)||(20002279-20002330)
chr8 (19-75)||(22033555-22033611)
chr8 (19-75)||(22099655-22099711)
chr8 (19-75)||(22102552-22102608)
chr8 (19-70)||(21831181-21831232)
chr8 (19-70)||(22817755-22817806)
chr8 (159-221)||(20712477-20712539)
chr8 (20-68)||(18572977-18573025)
chr8 (20-62)||(19902174-19902216)
[»] scaffold0029 (2 HSPs)
scaffold0029 (19-221)||(123383-123584)
scaffold0029 (20-62)||(77391-77433)
[»] chr7 (38 HSPs)
chr7 (19-221)||(9582907-9583108)
chr7 (19-221)||(16119849-16120050)
chr7 (23-221)||(23515081-23515278)
chr7 (19-221)||(14551112-14551314)
chr7 (19-221)||(8717879-8718080)
chr7 (19-221)||(13673870-13674071)
chr7 (19-221)||(18593352-18593553)
chr7 (19-221)||(18618131-18618332)
chr7 (19-221)||(4312571-4312772)
chr7 (19-221)||(538755-538957)
chr7 (19-221)||(12567027-12567229)
chr7 (19-221)||(12548805-12549006)
chr7 (21-221)||(9003965-9004165)
chr7 (19-214)||(8780936-8781132)
chr7 (20-208)||(48801777-48801964)
chr7 (19-221)||(20108382-20108584)
chr7 (19-221)||(9264939-9265141)
chr7 (19-221)||(13657880-13658081)
chr7 (19-221)||(11921307-11921505)
chr7 (19-82)||(16465616-16465679)
chr7 (19-199)||(16532130-16532311)
chr7 (19-199)||(16633351-16633532)
chr7 (19-75)||(825783-825839)
chr7 (19-75)||(4461242-4461298)
chr7 (19-75)||(14221718-14221774)
chr7 (19-75)||(15916776-15916832)
chr7 (19-75)||(18287761-18287817)
chr7 (19-75)||(27291496-27291552)
chr7 (19-82)||(15206584-15206647)
chr7 (19-77)||(5397273-5397331)
chr7 (19-68)||(15065935-15065984)
chr7 (19-72)||(9194544-9194597)
chr7 (23-75)||(6713072-6713124)
chr7 (20-75)||(4791383-4791438)
chr7 (20-75)||(15348532-15348587)
chr7 (35-75)||(15522517-15522557)
chr7 (20-62)||(15940731-15940773)
chr7 (150-198)||(16465743-16465791)
[»] chr6 (29 HSPs)
chr6 (19-221)||(15699569-15699770)
chr6 (19-221)||(22165549-22165750)
chr6 (19-221)||(22243826-22244027)
chr6 (19-221)||(22061503-22061704)
chr6 (19-221)||(24855245-24855446)
chr6 (19-218)||(22767116-22767314)
chr6 (19-221)||(20170256-20170458)
chr6 (19-221)||(23023100-23023302)
chr6 (19-217)||(18448151-18448349)
chr6 (19-220)||(18854026-18854226)
chr6 (19-221)||(2181067-2181269)
chr6 (19-221)||(25625698-25625899)
chr6 (23-221)||(20107784-20107982)
chr6 (19-221)||(21560554-21560755)
chr6 (19-221)||(25631269-25631470)
chr6 (19-213)||(29595711-29595904)
chr6 (19-221)||(25963255-25963457)
chr6 (19-221)||(25967902-25968104)
chr6 (19-209)||(30671807-30671997)
chr6 (109-221)||(19585631-19585743)
chr6 (19-82)||(18184874-18184937)
chr6 (131-221)||(20016339-20016430)
chr6 (19-76)||(35270971-35271028)
chr6 (19-82)||(18731868-18731931)
chr6 (19-82)||(20218981-20219044)
chr6 (19-82)||(22113006-22113069)
chr6 (19-75)||(11204004-11204060)
chr6 (23-75)||(23517835-23517887)
chr6 (19-75)||(29686601-29686657)
[»] chr4 (22 HSPs)
chr4 (19-221)||(11496614-11496815)
chr4 (19-221)||(13822927-13823128)
chr4 (19-221)||(42709731-42709932)
chr4 (19-221)||(15254362-15254563)
chr4 (19-221)||(10630764-10630965)
chr4 (19-221)||(3354653-3354855)
chr4 (19-218)||(18291954-18292153)
chr4 (19-221)||(17484910-17485112)
chr4 (19-221)||(18081459-18081662)
chr4 (19-221)||(45234232-45234434)
chr4 (19-221)||(38426751-38426938)
chr4 (19-221)||(56580539-56580742)
chr4 (19-82)||(14653998-14654061)
chr4 (150-221)||(8092559-8092630)
chr4 (21-75)||(15865647-15865701)
chr4 (19-75)||(10650547-10650603)
chr4 (19-75)||(15260109-15260165)
chr4 (19-75)||(16682913-16682969)
chr4 (19-70)||(15409534-15409585)
chr4 (19-75)||(9488878-9488934)
chr4 (19-79)||(8092427-8092487)
chr4 (20-68)||(17296250-17296298)
[»] chr3 (49 HSPs)
chr3 (19-221)||(10602472-10602673)
chr3 (19-221)||(13504881-13505082)
chr3 (19-221)||(11947421-11947622)
chr3 (19-221)||(16448760-16448961)
chr3 (19-221)||(7600369-7600570)
chr3 (19-221)||(15556942-15557143)
chr3 (19-221)||(9360971-9361172)
chr3 (19-221)||(16373565-16373766)
chr3 (19-221)||(12187076-12187277)
chr3 (19-221)||(37942392-37942593)
chr3 (20-221)||(12193491-12193691)
chr3 (23-221)||(6814882-6815079)
chr3 (19-221)||(10147025-10147226)
chr3 (19-221)||(15645015-15645216)
chr3 (19-221)||(10160173-10160374)
chr3 (20-221)||(13187418-13187618)
chr3 (20-219)||(3245589-3245787)
chr3 (19-221)||(2721311-2721511)
chr3 (19-221)||(13097718-13097919)
chr3 (19-221)||(4382758-4382961)
chr3 (19-221)||(13001425-13001628)
chr3 (19-221)||(10546936-10547141)
chr3 (19-221)||(20156515-20156715)
chr3 (19-221)||(1992810-1993011)
chr3 (19-221)||(13690615-13690816)
chr3 (19-221)||(11398222-11398424)
chr3 (19-221)||(14348588-14348790)
chr3 (19-221)||(22637706-22637908)
chr3 (19-221)||(3279197-3279399)
chr3 (19-221)||(17387843-17388045)
chr3 (19-221)||(12160207-12160409)
chr3 (137-221)||(16655812-16655897)
chr3 (19-75)||(27356728-27356784)
chr3 (19-76)||(13601220-13601277)
chr3 (19-75)||(3339226-3339282)
chr3 (19-75)||(12776534-12776590)
chr3 (19-75)||(13136210-13136266)
chr3 (19-75)||(20584262-20584318)
chr3 (19-70)||(15946773-15946824)
chr3 (27-82)||(17045847-17045902)
chr3 (27-82)||(17048007-17048062)
chr3 (19-77)||(14445768-14445826)
chr3 (19-75)||(15619283-15619339)
chr3 (19-75)||(13195458-13195514)
chr3 (19-74)||(8686387-8686442)
chr3 (19-82)||(20225754-20225817)
chr3 (19-70)||(13068306-13068357)
chr3 (19-50)||(2005499-2005530)
chr3 (19-75)||(16703307-16703363)
[»] chr2 (32 HSPs)
chr2 (19-221)||(22665076-22665277)
chr2 (19-221)||(117557-117758)
chr2 (19-221)||(22044660-22044861)
chr2 (19-221)||(25357525-25357726)
chr2 (19-221)||(11615-11816)
chr2 (19-221)||(16775665-16775866)
chr2 (19-221)||(17590421-17590622)
chr2 (19-221)||(24795285-24795486)
chr2 (19-221)||(27627594-27627796)
chr2 (19-221)||(25144757-25144959)
chr2 (19-221)||(5500265-5500467)
chr2 (19-221)||(25804267-25804468)
chr2 (24-221)||(25370890-25371086)
chr2 (19-221)||(23798922-23799123)
chr2 (19-208)||(23643970-23644160)
chr2 (145-221)||(24502175-24502251)
chr2 (19-174)||(24178193-24178348)
chr2 (19-75)||(23159385-23159441)
chr2 (19-75)||(23570642-23570698)
chr2 (19-75)||(27631655-27631711)
chr2 (19-75)||(27768816-27768872)
chr2 (19-70)||(24171510-24171561)
chr2 (19-82)||(24506802-24506865)
chr2 (19-75)||(23257570-23257625)
chr2 (23-75)||(24321328-24321380)
chr2 (19-82)||(25337651-25337714)
chr2 (38-80)||(23648123-23648165)
chr2 (20-65)||(29955868-29955913)
chr2 (20-64)||(19805618-19805662)
chr2 (20-68)||(21512567-21512615)
chr2 (20-75)||(24019068-24019123)
chr2 (20-62)||(17334606-17334648)
[»] chr5 (28 HSPs)
chr5 (19-221)||(20595831-20596032)
chr5 (19-221)||(20602117-20602318)
chr5 (19-221)||(20608408-20608609)
chr5 (19-221)||(15735548-15735749)
chr5 (44-221)||(23710701-23710878)
chr5 (19-221)||(23748065-23748266)
chr5 (19-220)||(24940548-24940749)
chr5 (19-221)||(18072914-18073115)
chr5 (37-221)||(20622176-20622359)
chr5 (19-221)||(24953174-24953375)
chr5 (19-221)||(20790714-20790915)
chr5 (19-221)||(23600636-23600838)
chr5 (19-221)||(24219759-24219961)
chr5 (23-221)||(20444843-20445041)
chr5 (19-214)||(21387410-21387605)
chr5 (19-221)||(20916456-20916657)
chr5 (150-221)||(22948525-22948596)
chr5 (107-220)||(20575517-20575630)
chr5 (19-75)||(22317513-22317569)
chr5 (19-75)||(25006808-25006864)
chr5 (19-75)||(30759655-30759711)
chr5 (19-82)||(18484212-18484275)
chr5 (19-69)||(25116171-25116221)
chr5 (19-75)||(26847803-26847859)
chr5 (19-64)||(25175261-25175306)
chr5 (23-75)||(22855723-22855775)
chr5 (20-64)||(27270563-27270607)
chr5 (20-68)||(17412736-17412784)
[»] chr1 (15 HSPs)
chr1 (19-221)||(27046888-27047089)
chr1 (19-221)||(17094601-17094802)
chr1 (19-221)||(21798662-21798864)
chr1 (19-221)||(20237470-20237671)
chr1 (23-209)||(8653142-8653327)
chr1 (19-221)||(52938621-52938823)
chr1 (19-221)||(19364043-19364244)
chr1 (19-221)||(3989951-3990154)
chr1 (19-107)||(14070632-14070720)
chr1 (23-77)||(19875648-19875702)
chr1 (19-82)||(21784472-21784535)
chr1 (19-82)||(4027832-4027895)
chr1 (22-75)||(16382578-16382631)
chr1 (19-82)||(8947515-8947578)
chr1 (20-62)||(18478234-18478276)
[»] scaffold0230 (1 HSPs)
scaffold0230 (19-221)||(15692-15893)
[»] scaffold0404 (2 HSPs)
scaffold0404 (19-221)||(1052-1253)
scaffold0404 (19-82)||(3461-3524)
[»] scaffold0215 (1 HSPs)
scaffold0215 (19-210)||(615-805)
[»] scaffold0113 (1 HSPs)
scaffold0113 (19-221)||(227-428)
[»] scaffold0825 (1 HSPs)
scaffold0825 (19-221)||(2852-3054)
[»] scaffold0026 (1 HSPs)
scaffold0026 (19-220)||(11064-11264)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-221)||(251870-252072)
[»] scaffold0506 (1 HSPs)
scaffold0506 (19-221)||(2287-2489)
[»] scaffold0315 (1 HSPs)
scaffold0315 (19-221)||(14662-14863)
[»] scaffold0156 (1 HSPs)
scaffold0156 (19-221)||(838-1041)
[»] scaffold0020 (1 HSPs)
scaffold0020 (19-221)||(120960-121162)
[»] scaffold0773 (1 HSPs)
scaffold0773 (19-221)||(486-687)
[»] scaffold0679 (1 HSPs)
scaffold0679 (19-221)||(7948-8149)
[»] scaffold0011 (3 HSPs)
scaffold0011 (19-178)||(164403-164562)
scaffold0011 (20-82)||(172254-172316)
scaffold0011 (19-82)||(161995-162058)
[»] scaffold0032 (1 HSPs)
scaffold0032 (19-219)||(97726-97927)
[»] scaffold0974 (1 HSPs)
scaffold0974 (19-221)||(1115-1318)
[»] scaffold0420 (1 HSPs)
scaffold0420 (19-138)||(10206-10325)
[»] scaffold0034 (1 HSPs)
scaffold0034 (19-221)||(58628-58831)
[»] scaffold0328 (1 HSPs)
scaffold0328 (19-221)||(510-711)
[»] scaffold0278 (1 HSPs)
scaffold0278 (19-220)||(13002-13202)
[»] scaffold0582 (1 HSPs)
scaffold0582 (19-138)||(8750-8869)
[»] scaffold0059 (1 HSPs)
scaffold0059 (21-181)||(12450-12609)
[»] scaffold0013 (1 HSPs)
scaffold0013 (21-181)||(232789-232948)
[»] scaffold0162 (1 HSPs)
scaffold0162 (19-221)||(35104-35303)
[»] scaffold0096 (2 HSPs)
scaffold0096 (19-83)||(38508-38572)
scaffold0096 (156-200)||(38631-38675)
[»] scaffold0512 (1 HSPs)
scaffold0512 (19-82)||(5232-5295)
[»] scaffold0056 (1 HSPs)
scaffold0056 (19-82)||(42237-42300)
[»] scaffold0035 (2 HSPs)
scaffold0035 (19-82)||(50506-50569)
scaffold0035 (20-62)||(88361-88403)
[»] scaffold0861 (1 HSPs)
scaffold0861 (19-77)||(912-970)
[»] scaffold0566 (1 HSPs)
scaffold0566 (19-75)||(2762-2818)
[»] scaffold0375 (1 HSPs)
scaffold0375 (19-70)||(12743-12794)
[»] scaffold0258 (1 HSPs)
scaffold0258 (23-82)||(22159-22218)
[»] scaffold0384 (1 HSPs)
scaffold0384 (19-75)||(10720-10776)
[»] scaffold0089 (1 HSPs)
scaffold0089 (19-75)||(54849-54905)
[»] scaffold1225 (1 HSPs)
scaffold1225 (19-82)||(1839-1902)
[»] scaffold0116 (1 HSPs)
scaffold0116 (19-82)||(37743-37806)
[»] scaffold0094 (1 HSPs)
scaffold0094 (20-75)||(1193-1248)
[»] scaffold0031 (1 HSPs)
scaffold0031 (19-82)||(22756-22818)
[»] scaffold1095 (1 HSPs)
scaffold1095 (161-221)||(2866-2926)
[»] scaffold0117 (1 HSPs)
scaffold0117 (19-82)||(45228-45291)
[»] scaffold0088 (1 HSPs)
scaffold0088 (23-77)||(37868-37922)
[»] scaffold0037 (2 HSPs)
scaffold0037 (19-69)||(72572-72622)
scaffold0037 (19-69)||(84762-84812)
[»] scaffold0123 (1 HSPs)
scaffold0123 (19-64)||(18218-18263)
[»] scaffold0001 (1 HSPs)
scaffold0001 (35-75)||(83174-83214)
[»] scaffold0226 (1 HSPs)
scaffold0226 (22-62)||(3251-3291)


Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 21382309 - 21382107
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21382309 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 21382210  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21382209 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 21382110  T
Q  219 tgt 221  Q
    |||    
T  21382109 tgt 21382107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 21098794 - 21098995
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| || ||||||||||||||| | ||||||||    
T  21098794 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaacaattttatcaaatgacaatt-cgattaaagc 21098892  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||| |||||||    
T  21098893 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaattcaagcatttcttgtcatttttattcaacccaatgatcaagttttaagtgag 21098992  T
Q  219 tgt 221  Q
    |||    
T  21098993 tgt 21098995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 21104115 - 21104316
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| || ||||||||||||||| | ||||||||    
T  21104115 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaacaattttatcaaatgacaatt-cgattaaagc 21104213  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||| |||||||    
T  21104214 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaattcaagcatttcttgtcatttttattcaacccaatgatcaagttttaagtgag 21104313  T
Q  219 tgt 221  Q
    |||    
T  21104314 tgt 21104316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 23911655 - 23911455
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||    
T  23911655 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaatagttatatcaaatgacaa-ttcgattaaagc 23911557  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||| || |||||||||||||||||||||||||||| |||||| |||||||||||    
T  23911556 acatgtctcctcaagggcttaaatcccagatgtacactaatcacaaacttaaacatttcttgtaatttttattcaacccaa-gatcaaatttcaagtgag 23911458  T
Q  219 tgt 221  Q
    |||    
T  23911457 tgt 23911455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 8314683 - 8314481
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||  | |||||||    
T  8314683 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacatttaaatcaaatgacaattaaatttaaagc 8314584  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||| |||||||    
T  8314583 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagttttaagtgag 8314484  T
Q  219 tgt 221  Q
    |||    
T  8314483 tgt 8314481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 8322846 - 8323048
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||| || |||||||||    
T  8322846 catcaaactccctcatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcgacagttaaatcaaatgacaaatt-aattaaagc 8322944  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||    
T  8322945 acatgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagtttcaagtga 8323044  T
Q  218 gtgt 221  Q
    ||||    
T  8323045 gtgt 8323048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 21843524 - 21843726
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcacta-acagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| |  ||||| |||||||||| |||||||     
T  21843524 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaagacaatattatcatatgacaattt-aattaaaa 21843622  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |||||||||||||||||||||||||  |||  ||||  ||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  21843623 cacatgtctcctcaagggcttaaatttcaagcgtacagtaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtga 21843722  T
Q  218 gtgt 221  Q
    ||||    
T  21843723 gtgt 21843726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 20038981 - 20039182
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||     |||| ||||| |||| || |||       
T  20038981 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaacaagatcatcacatgac-attttaactaagat 20039079  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||| |||| ||||| |||  |||||||||  |||||||||||||||| ||||||||||||  || ||||||||||| |||||||||||| ||||    
T  20039080 acatgtctcttcaaaggctttaatttcaaatgtacaataatcacaaactcaagtatttcttgtaatcctttttcaacccaacaatcaagtttcaaatgag 20039179  T
Q  219 tgt 221  Q
    |||    
T  20039180 tgt 20039182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 21939996 - 21940199
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||   || |    ||||| ||||||| || ||||||||    
T  21939996 catcaaactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaacatggtagcataaaataacattatcatatgacaa-ttaaattaaag 21940094  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    ||||||||||||||| |||||  ||  ||||  |||| ||||||||||||||||||||||||||||||  || ||||||||||| ||||||| | |||||    
T  21940095 cacatgtctcctcaaaggctttcatttcaaagagtacactaatcacaaactcaagcatttcttgtaatcctttttcaacccaacaatcaagtctgaagtg 21940194  T
Q  217 agtgt 221  Q
    |||||    
T  21940195 agtgt 21940199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 17620961 - 17620761
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  ||||    ||    |||||||||| ||||||| |    
T  17620961 catcaaactcccccacacttgaatttttgcttgtcctcaagcaaaaggcataaacatggtagcataaacaagattacttcatgacaattt-aattaaaac 17620863  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||| ||||| |||  ||| ||||| ||||||| |||||||||||||  |||||||  || ||||| ||||| |||||||||||||||||    
T  17620862 acatgtctcctcaaaggctttaatttcaagtgtaccctaatcataaactcaagcattctttgtaatcctttttcaa-ccaacaatcaagtttcaagtgag 17620764  T
Q  219 tgt 221  Q
    |||    
T  17620763 tgt 17620761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 16418620 - 16418823
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||   || |    ||||| ||||||||| | ||||||     
T  16418620 catcaaactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaacatggtagcataaaataacattatcatatgacaattac-attaaaa 16418718  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    ||||||||||||||| |||||  ||  ||||  |||| ||||||||||||||||||||||||| ||||  || ||||||||||| ||||||| | |||||    
T  16418719 cacatgtctcctcaaaggcttttatttcaaagagtacactaatcacaaactcaagcatttcttataatcctttttcaacccaacaatcaagtcttaagtg 16418818  T
Q  217 agtgt 221  Q
    |||||    
T  16418819 agtgt 16418823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 23455154 - 23454951
Alignment:
Q  19 catcaaactccccc-acacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaatt-aaa 116  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||  ||||    |  || ||||||||| ||||| |||    
T  23455154 catcaaactccccccacacttgaatctttgcttgtcctcgagcaaaaggcataaacatagtagcataaacaagactcacatatgacaatt-caattgaaa 23455056  T
Q  117 gcacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
        |||||||||||| |||||  ||  |||   ||| |||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  23455055 atttatgtctcctcaaaggctttcatttcaagcatacactaatcacaaactcaagcatttcttgtaatctttattcaatccaacaatcaagtttcaagtg 23454956  T
Q  217 agtgt 221  Q
    |||||    
T  23454955 agtgt 23454951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 24034230 - 24034049
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagtta-tatcaaatgacaatttcaatt-aaa 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  |  | ||  | ||||||| ||||||| |||    
T  24034230 catcaaactcccccacacttgaatctttgcttgtccacaagcaaaaggcataaacatagtagcaataaacgagattaatatatgacaa-ttcaattgaaa 24034132  T
Q  117 gcacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaa 199  Q
     |  |||||||||||| ||||| |||  |||  |||| || ||||||||||||||||||||||||||| ||||||||||||||    
T  24034131 acttatgtctcctcaaaggctttaatttcaagcgtacactgatcacaaactcaagcatttcttgtaatctttattcaacccaa 24034049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 14352181 - 14352372
Alignment:
Q  30 cccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaac-agttatatcaaatgacaatttcaattaaagcacatgtctcc 128  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||  ||| || || || | |||||||||  ||||||| | |||||||||    
T  14352181 cccacacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaacaagata-attatatgacaattaaaattaaaactcatgtctcc 14352279  T
Q  129 tcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    ||   |||||  ||  |||  |||| ||||| || ||||||||||||  ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  14352280 tccgaggcttttatttcaagcgtacactaattactaactcaagcattctttgtaatctttattcaacccaacaatcaagtctcaagtgagtgt 14352372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 21538765 - 21538573
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||   ||||    ||||| ||||||| ||||||||||     
T  21538765 catcaaaatcccccacacttaaatttttgcttgtcctcaagcaaaaggcataaacatggtagcataaaacaagattatcatatgacaa-ttcaattaaaa 21538667  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgc--taatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtt 209  Q
    |  |||||||||||| | ||| |||  |||  |||| |  ||||||||||||| ||  ||||||||||| ||||||||||||||| ||||||||    
T  21538666 cttatgtctcctcaaagactttaatttcaatcgtacactataatcacaaactccagggtttcttgtaatctttattcaacccaacaatcaagtt 21538573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 20712649 - 20712537
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcac-taacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||  ||||    ||||| |||||||||| ||| ||||    
T  20712649 catcaaactcccctacacttaaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaacaacattatcatatgacaattt-aatcaaag 20712551  T
Q  118 cacatgtctcctca 131  Q
    ||||||||||||||    
T  20712550 cacatgtctcctca 20712537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 11346953 - 11347009
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11346953 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 11347009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 19767740 - 19767684
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19767740 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 19767684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 22370158 - 22370102
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22370158 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 22370102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 20002330 - 20002279
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20002330 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 20002279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 22033555 - 22033611
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  22033555 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacatagacat 22033611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 22099655 - 22099711
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  22099655 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacatagacat 22099711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 22102608 - 22102552
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  22102608 catcaaactcccctacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 22102552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 21831232 - 21831181
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21831232 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 21831181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 22817806 - 22817755
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 70  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  22817806 catcaaactcccccacacttgaatctttgcttttcctcaagcaaaagacata 22817755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 20712539 - 20712477
Alignment:
Q  159 tcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    |||||||||||| ||||||||||||| ||| ||||||||||| ||||||| |||| |||||||    
T  20712539 tcacaaactcaatcatttcttgtaatcttttttcaacccaacaatcaagtctcaaatgagtgt 20712477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 18572977 - 18573025
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggca 68  Q
    |||||||||||||| |||||||| ||| |||||||| ||||||||||||    
T  18572977 atcaaactcccccatacttgaattttttcttgtccttaagcaaaaggca 18573025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 19902174 - 19902216
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 62  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  19902174 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 19902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 123584 - 123383
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  123584 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 123486  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  123485 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 123386  T
Q  219 tgt 221  Q
    |||    
T  123385 tgt 123383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 77391 - 77433
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 62  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  77391 atcaaactcccctacacttgaaccattgcttgtcctcaagcaa 77433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 9583108 - 9582907
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  9583108 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 9583010  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9583009 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 9582910  T
Q  219 tgt 221  Q
    |||    
T  9582909 tgt 9582907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 16119849 - 16120050
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  16119849 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacatatacatagtagcacaaacagttatatcaaatgacaatt-caattaaagc 16119947  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16119948 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 16120047  T
Q  219 tgt 221  Q
    |||    
T  16120048 tgt 16120050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 23515278 - 23515081
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagcacat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||| ||||||||||||||    
T  23515278 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaacaattatatcaaatgacaatt-caattaaagcacat 23515180  T
Q  123 gtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23515179 gtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 23515081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 14551314 - 14551112
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  14551314 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcacaaacggttatatcaaatgacaa-ttcaattaaagc 14551216  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaa-tttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14551215 acatgtcccctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaattttttattcaacccaacgatcaagtttcaagtga 14551116  T
Q  218 gtgt 221  Q
    ||||    
T  14551115 gtgt 14551112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 8718080 - 8717879
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  8718080 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaatgcataaacatagtagcaccaatagttatatcaaatgacaatt-caattaaagc 8717982  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  8717981 acatgtctcctcaagggcttaaatcccaagtgtacactaatcacaaactcaagtgtttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 8717882  T
Q  219 tgt 221  Q
    |||    
T  8717881 tgt 8717879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 13674071 - 13673870
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||||| |||||||||    
T  13674071 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacgtagtagcatcaacagttaaatcaaatgacaattt-aattaaagc 13673973  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||| ||| ||||||||||||||||| |||||||    
T  13673972 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagtatttcttgaaatcttttttctacccaacgatcaagttttaagtgag 13673873  T
Q  219 tgt 221  Q
    |||    
T  13673872 tgt 13673870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 18593352 - 18593553
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||  ||||||||     
T  18593352 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaatta-aattaaagt 18593450  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||||||    
T  18593451 acatgtctcctcaagggcttaaatccaaaatgtacactaattacaaactcaagtatttcttggaatctttattctacccaacgatcaagtttcaagtgag 18593550  T
Q  219 tgt 221  Q
    |||    
T  18593551 tgt 18593553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 18618332 - 18618131
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||  ||||||||     
T  18618332 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaatta-aattaaagt 18618234  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||||||    
T  18618233 acatgtctcctcaagggcttaaatccaaaatgtacactaattacaaactcaagtatttcttggaatctttattctacccaacgatcaagtttcaagtgag 18618134  T
Q  219 tgt 221  Q
    |||    
T  18618133 tgt 18618131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 4312772 - 4312571
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    ||||| ||||||| |||||||||| |    
T  4312772 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaacaagattatcatatgacaa-ttcaattaaaac 4312674  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
      |||||||||||| |||||  ||  |||  |||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  4312673 ttatgtctcctcaaaggcttttatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtgag 4312574  T
Q  219 tgt 221  Q
    |||    
T  4312573 tgt 4312571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 538755 - 538957
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |  ||||| |||||||||| ||||||| |    
T  538755 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaacaatattatcatatgacaattt-aattaaaac 538853  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagca-tttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||| ||||| || |||  |||  |||| ||||||||||||||||||| ||| ||||||| ||||||||||||||| ||||||||||||||||    
T  538854 acatgtctcctgaagggttttaatttcaagcgtacactaatcacaaactcaagcatttttttgtaatctttattcaacccaacaatcaagtttcaagtga 538953  T
Q  218 gtgt 221  Q
    ||||    
T  538954 gtgt 538957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 12567229 - 12567027
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||| || || || |  ||||| |||||||||| |||||||     
T  12567229 catcaaactcccccacacttgaatttttgcttgtcctcaagcaaaatgcataaacatggtagaacaaaacaatattatcatatgacaattt-aattaaaa 12567131  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    | ||||||||||||||||||| |||  |||  |||| |||||||||||||||| ||||||||||||   |||||||||||||| ||||||||||||||||    
T  12567130 ctcatgtctcctcaagggcttcaatttcaagcgtacactaatcacaaactcaaacatttcttgtaaaccttattcaacccaacaatcaagtttcaagtga 12567031  T
Q  218 gtgt 221  Q
    ||||    
T  12567030 gtgt 12567027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 12548805 - 12549006
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcac-taacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||  || | |  ||||| |||||||||| |||||||     
T  12548805 catcaaactccccaacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaataatattatcatatgacaattt-aattaaa- 12548902  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
     |||||||||||||||||||| |||  |||  || | |||||||||||||||||||||||||||||   |||||||||||||| |||||| |||||||||    
T  12548903 tacatgtctcctcaagggcttcaatttcaagcgtccactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagcttcaagtga 12549002  T
Q  218 gtgt 221  Q
    ||||    
T  12549003 gtgt 12549006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 9004165 - 9003965
Alignment:
Q  21 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaagca 119  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   ||||  | ||||| ||||||| |||||||||| |     
T  9004165 tcaaactcccccacacttgaatctttgtttgtcctcaagcaaaaggcataaacatagtagcataaaacaagtttatcatatgacaa-ttcaattaaaact 9004067  T
Q  120 catgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagt 219  Q
     |||||||||||| |||||  ||  |||   ||| ||||| ||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||    
T  9004066 tatgtctcctcaaaggcttttatttcaagcatacactaattacaaactcaagcatttcttgtgatctttattcaacccaacaatcaagtttcaagtgagt 9003967  T
Q  220 gt 221  Q
    ||    
T  9003966 gt 9003965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 8780936 - 8781132
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||  ||||    || || ||||||| ||||||||||      
T  8780936 catcaaactcccccacacttgaatctttgcttgtcctcaaacaaaaggcataaacatagcagcataaacaagattaacatatgacaa-ttcaattaaaaa 8781034  T
Q  119 ac--atgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaag 214  Q
    ||  |||||||||||| |||||  ||  ||| ||||| |||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  8781035 acttatgtctcctcaaaggcttttatttcaagtgtacactaatcacaaactcaagcatttcttgtaacctttattcaacccaacaatcaagtttcaag 8781132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 48801777 - 48801964
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaac--ag-ttatatcaaatgacaatttcaattaaa 116  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||   || ||||||   ||||||||| |||| |||    
T  48801777 atcaaactcccccacacttgaatcttttcttgtcctcaagcaaaaggcatacacatagtagcaataaacaagattatat---atgacaatt-caatcaaa 48801872  T
Q  117 gcacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagt 208  Q
     | ||||||||||||| ||||| |||  |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  48801873 actcatgtctcctcaaaggctttaatttcaaacgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagt 48801964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 20108584 - 20108382
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||  || ||    ||||| |||| |||| ||||||||     
T  20108584 catcaaactcccccacacttgaatcttttattgtcctcaagcaaaagacataaacatagtagcataaaacaaggttatcatatgagaatt-caattaaaa 20108486  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |  |||||||||||| |||||  ||  |||   ||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  20108485 ctgatgtctcctcaaaggcttttatttcaagcatacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtga 20108386  T
Q  218 gtgt 221  Q
    ||||    
T  20108385 gtgt 20108382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 9264939 - 9265141
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaat-taaag 117  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||  | ||    || || ||||||| ||||||  |||     
T  9264939 catcaaactcccccacacttgaatctttgcttgtcctcaaacaaaaggcataaacatagcagcataagcaagattaacatatgacaa-ttcaataaaaaa 9265037  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |  |||||||||||| | |||  ||  |||  |||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||    
T  9265038 cttatgtctcctcaaagacttttatttcaagcgtacactaatcacaaactcaagtatttcttgtaatctttattcaacccaacaatcaagtttcaagtga 9265137  T
Q  218 gtgt 221  Q
    ||||    
T  9265138 gtgt 9265141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 13658081 - 13657880
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||   ||||    ||    |||||||||| ||||||| |    
T  13658081 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatcaacatggtagcgtaaacaagattacttcatgacaattt-aattaaaac 13657983  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||| ||||||||| ||||| |||  ||| ||||| |||||||||||||||||||||  |||||||   | ||| ||||||| |||||||||||| ||||    
T  13657982 acatatctcctcaaaggctttaatttcaagtgtacactaatcacaaactcaagcattctttgtaatcccttttccacccaacaatcaagtttcaaatgag 13657883  T
Q  219 tgt 221  Q
    |||    
T  13657882 tgt 13657880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 11921307 - 11921505
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||   ||| ||||||||| | ||||||||    
T  11921307 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagtcataaacatggtagca-taacattt---tcacatgacaattac-attaaagc 11921401  T
Q  119 acatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||| |||||||||| |||||  ||  ||||  |||| |||||||||||| |||||||||||| ||||  || ||||||||||| ||| |||   ||||||    
T  11921402 acacgtctcctcaaaggcttttatttcaaagagtacactaatcacaaacgcaagcatttcttataatcctttttcaacccaacaatctagtcctaagtga 11921501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 16465616 - 16465679
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16465616 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaacatagtagca 16465679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 16532311 - 16532130
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagc----actaacagttatatcaaatgacaatttcaatta 114  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||    | ||||| ||   ||| ||||||||| | ||||    
T  16532311 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaaataacattt---tcatatgacaattac-atta 16532216  T
Q  115 aagcacatgtctcctcaagggc-ttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaa 199  Q
    |||||||||||||||||| ||| || | | | ||  |||| ||||||||||||||||| ||||||| |||  ||| ||||||||||    
T  16532215 aagcacatgtctcctcaaaggcatttatttcaaagagtacactaatcacaaactcaagtatttcttataaccttttttcaacccaa 16532130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 16633351 - 16633532
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagc----actaacagttatatcaaatgacaatttcaatta 114  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||    | ||||| ||   ||| ||||||||| | ||||    
T  16633351 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaaataacattt---tcatatgacaattac-atta 16633446  T
Q  115 aagcacatgtctcctcaagggc-ttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaa 199  Q
    |||||||||||||||||| ||| || | | | ||  |||| ||||||||||||||||| ||||||| |||  ||| ||||||||||    
T  16633447 aagcacatgtctcctcaaaggcatttatttcaaagagtacactaatcacaaactcaagtatttcttataaccttttttcaacccaa 16633532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 825839 - 825783
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  825839 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 825783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 4461242 - 4461298
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4461242 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 4461298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 14221718 - 14221774
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14221718 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 14221774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 15916776 - 15916832
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15916776 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 15916832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 18287817 - 18287761
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18287817 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 18287761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 27291552 - 27291496
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27291552 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 27291496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 15206584 - 15206647
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  15206584 catcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcatagacatagcagca 15206647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 5397331 - 5397273
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatag 77  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  5397331 catcaaactcccctacacttgaatctttgcttgtcctcaagcaaaaggcatagacatag 5397273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 15065984 - 15065935
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggca 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15065984 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggca 15065935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 9194544 - 9194597
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaa 72  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  9194544 catcaaactcccccatacttgaatctttgtttgtcctcaagcaaaaggcataaa 9194597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 6713072 - 6713124
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  6713072 aaactcccctatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 6713124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 4791383 - 4791438
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||| ||||||||||||||||||||||||||| || ||||| ||||    
T  4791383 atcaaactcccccatacttgaatctttgcttgtcctcaagcagaatgcatagacat 4791438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 15348587 - 15348532
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  15348587 atcaaacttccccaaacttgaatctttgtttgtcctcaagtaaaaggcataaacat 15348532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 15522557 - 15522517
Alignment:
Q  35 acttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  15522557 acttgaatctttgcttgtcctcaagtaaaaggcataaacat 15522517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 15940773 - 15940731
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 62  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  15940773 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 15940731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 16465743 - 16465791
Alignment:
Q  150 gtacgctaatcacaaactcaagcatttcttgtaatttttattcaaccca 198  Q
    |||| ||||||||||||||||||||||||| ||||  || |||||||||    
T  16465743 gtacactaatcacaaactcaagcatttcttataatcctttttcaaccca 16465791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 15699770 - 15699569
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  15699770 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 15699672  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15699671 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 15699572  T
Q  219 tgt 221  Q
    |||    
T  15699571 tgt 15699569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 22165549 - 22165750
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  22165549 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 22165647  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22165648 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 22165747  T
Q  219 tgt 221  Q
    |||    
T  22165748 tgt 22165750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 22244027 - 22243826
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  22244027 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 22243929  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22243928 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 22243829  T
Q  219 tgt 221  Q
    |||    
T  22243828 tgt 22243826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 22061503 - 22061704
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  22061503 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 22061601  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22061602 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 22061701  T
Q  219 tgt 221  Q
    |||    
T  22061702 tgt 22061704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 24855245 - 24855446
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||||||||||  |||||||||    
T  24855245 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaatagttaaatcaaatgacaatt--aattaaagc 24855342  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||| ||||||||||||||||    
T  24855343 acatgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacaatcaagtttcaagtga 24855442  T
Q  218 gtgt 221  Q
    ||||    
T  24855443 gtgt 24855446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 22767116 - 22767314
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| ||||||||||||||  |||||||||    
T  22767116 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtaacatcaacagttaaatcaaatgacaatt--aattaaagc 22767213  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||| ||||||||||||||||    
T  22767214 acatgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacaatcaagtttcaagtga 22767313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 20170458 - 20170256
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacag-ttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || || ||| ||||||||||||||  ||||||||    
T  20170458 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaatagtttaaatcaaatgacaatt--aattaaag 20170361  T
Q  118 cacatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||| |||||||||||||||    
T  20170360 cacatgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacaatcaagtttcaagtg 20170261  T
Q  217 agtgt 221  Q
    |||||    
T  20170260 agtgt 20170256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 23023302 - 23023100
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcacta-acagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||  | ||| |  ||||| |||||||||| |||||||     
T  23023302 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagtcttaaacatggtagcataagacaatattatcatatgacaattt-aattaaaa 23023204  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||| |||  |||  |||| |||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  23023203 cacatgtctcctcaagggctttaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtga 23023104  T
Q  218 gtgt 221  Q
    ||||    
T  23023103 gtgt 23023100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 18448349 - 18448151
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcac-taacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||  |||| |  ||||| |||||||||| |||||||     
T  18448349 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacttggtagcacaaaacaatattatcatatgacaattt-aattaaaa 18448251  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||| |||  |||  |||| |||||||||||||||||||||||||||||   ||||||| ||||||  |||||||||||||||    
T  18448250 cacatgtctcctcaagggctttaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcatcccaacagtcaagtttcaagtga 18448151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 18854226 - 18854026
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||| || ||||||  |||| |  ||||| |||||||||| ||||||  |    
T  18854226 catcaaactcccccatacttgaatcttttcttgtcctcaagcaaaaggcataaatatggtagcataaacaatattatcatatgacaattt-aattaatac 18854128  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||||||||| |||  | |  |||| |||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||    
T  18854127 acatgtctcctcaagggctttaatttccagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgag 18854028  T
Q  219 tg 220  Q
    ||    
T  18854027 tg 18854026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 2181269 - 2181067
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcac-taacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||| |  ||||| |||||||||| |||||||     
T  2181269 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaacaatattatcatatgacaattt-aattaaaa 2181171  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |||||||||||||||||||||||||  | |  | ||  |||||||||||| |||||||||| |||||  ||||||||| |||| | ||||||||||||||    
T  2181170 cacatgtctcctcaagggcttaaatttcgagcgcacattaatcacaaacttaagcatttctcgtaatccttattcaactcaacaaccaagtttcaagtga 2181071  T
Q  218 gtgt 221  Q
    ||||    
T  2181070 gtgt 2181067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 25625899 - 25625698
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||| ||||||  |||| |  ||||| |||||||||| ||||||| |    
T  25625899 catcaaactcccccatacttgaatttttgcttgtcctcaagcaaaaggtgtaaacatggtagcataaacaatattatcatatgacaattt-aattaaaac 25625801  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    | ||||||||| |||||||| |||  |||  |||| |||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||    
T  25625800 atatgtctccttaagggctttaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgag 25625701  T
Q  219 tgt 221  Q
    |||    
T  25625700 tgt 25625698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 20107784 - 20107982
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaaca-gttatatcaaatgacaatttcaatt-aaagcac 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | || | || ||||||||| ||||| ||| |      
T  20107784 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaacaagataaa-catatgacaatt-caattgaaaactt 20107881  T
Q  121 atgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtg 220  Q
    |||||||||||| |||||  ||  |||  |||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  20107882 atgtctcctcaaaggctttcatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtgagtg 20107981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 21560554 - 21560755
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||    ||    ||| |||||| ||||||| |    
T  21560554 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaacaagattacttcatgtcaattt-aattaaaac 21560652  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||| ||||| |||  ||| ||||| |||||||||||||||||||||  |||||||  || ||||||||||| |||||||||||| ||||    
T  21560653 acatgtctcctcaaaggctttaatttcaagtgtacactaatcacaaactcaagcattctttgtaatcctttttcaacccaacaatcaagtttcaaatgag 21560752  T
Q  219 tgt 221  Q
    |||    
T  21560753 tgt 21560755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 25631269 - 25631470
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaac--ag-ttatatcaaatgacaatttcaattaa 115  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| |||||| |||   || ||||||   ||||||||| |||||||    
T  25631269 catcaaactcccccacacttgaatctttgcttgtcctcaggaaaaatgcataaacatggtagcaataaacaagattatat---atgacaatt-caattaa 25631364  T
Q  116 agcacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagt 215  Q
    | |  || |||| |||| ||||| |||  |||  |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  25631365 aacttatatctcttcaaaggctttaatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagt 25631464  T
Q  216 gagtgt 221  Q
    ||||||    
T  25631465 gagtgt 25631470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 29595904 - 29595711
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||  || |    ||||| ||||| |||| ||||||| |    
T  29595904 catcaaactccctcacacttgaatctttgcttgtcctcaagcaaaaagcataaacatggtagcataaataagattatcacatgacgattt-aattaaaac 29595806  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaa 213  Q
    |||||||||| ||||||||| |||  ||| ||||| ||||| | |||||||| |||||||||||||  || ||||||||||  ||||||||||||    
T  29595805 acatgtctccccaagggctttaatttcaagtgtacactaataaaaaactcaaacatttcttgtaatcctttttcaacccaataatcaagtttcaa 29595711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 25963457 - 25963255
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaac-agttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | | ||   || || ||||||| ||||||||||     
T  25963457 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagtagcataagcaagacttaacatatgacaa-ttcaattaaaa 25963359  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
        ||||||||||| |||||  ||  |||   ||| ||||||||||||||||||||||| | |||| ||||||||||||||| ||||||||  ||||||    
T  25963358 tttgtgtctcctcaaaggcttttatttcaagcatacactaatcacaaactcaagcatttcctttaatctttattcaacccaacaatcaagttctaagtga 25963259  T
Q  218 gtgt 221  Q
    ||||    
T  25963258 gtgt 25963255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 25968104 - 25967902
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaac-agttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | | ||   || || ||||||| ||||||||||     
T  25968104 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagtagcataagcaagacttaacatatgacaa-ttcaattaaaa 25968006  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
        ||||||||||| |||||  ||  |||   ||| ||||||||||||||||||||||| | |||| ||||||||||||||| ||||||||  ||||||    
T  25968005 tttgtgtctcctcaaaggcttttatttcaagcatacactaatcacaaactcaagcatttcctttaatctttattcaacccaacaatcaagttctaagtga 25967906  T
Q  218 gtgt 221  Q
    ||||    
T  25967905 gtgt 25967902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 30671807 - 30671997
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaac-agttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | | ||   || || ||||||| ||||||||||     
T  30671807 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagtagcataagcaagacttaacatatgacaa-ttcaattaaaa 30671905  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtt 209  Q
        ||| ||| ||| |||||  ||  |||  |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  30671906 tttgtgtttccccaaaggcttttatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtt 30671997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 19585631 - 19585743
Alignment:
Q  109 caattaaagcacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagt 208  Q
    |||||||| | |||||||||| || |||||  ||  |||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  19585631 caattaaaactcatgtctcctaaaaggcttttatttcaaacgtacactaatcacaaacacaagcatttcttgtaatctttattcaacccaacaatcaagt 19585730  T
Q  209 ttcaagtgagtgt 221  Q
    || ||||||||||    
T  19585731 tttaagtgagtgt 19585743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 18184874 - 18184937
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18184874 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 18184937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 20016339 - 20016430
Alignment:
Q  131 aagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    |||||||||||||||||| ||||| |||||  |||||||||| |||||||| ||| ||||||| | ||||||||||||||||||||||||||    
T  20016339 aagggcttaaatcccaaaatgtacactaattgcaaactcaagtatttcttgaaatctttattctatccaacgatcaagtttcaagtgagtgt 20016430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 35271028 - 35270971
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacata 76  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35271028 catcaaacacccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacata 35270971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 18731931 - 18731868
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  18731931 catcaaactcctccacacttgaatcttagcttgtcctcaagcaaaaggcatagacatagcagca 18731868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 20218981 - 20219044
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||    
T  20218981 catcaaactcccccacacatgaatctttgcttctcttcaagcaaaaggcataaacatagcagca 20219044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 22113006 - 22113069
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||    
T  22113006 catcaaactcccccacacatgaatctttgcttctcttcaagcaaaaggcataaacatagcagca 22113069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 11204060 - 11204004
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  11204060 catcaaactcccccacacttaaatatttgcttgtcctcaagcaaaaggcatagacat 11204004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 23517835 - 23517887
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  23517835 aaactcccccatacttgaatctttgcttatcctcaagcaaaaggcatacacat 23517887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 29686657 - 29686601
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||    
T  29686657 catcaaactctcccatacttgaatcttttcttgtcctcaagcaagaggcataaacat 29686601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 11496614 - 11496815
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  11496614 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 11496712  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11496713 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 11496812  T
Q  219 tgt 221  Q
    |||    
T  11496813 tgt 11496815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 13823128 - 13822927
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  13823128 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 13823030  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13823029 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 13822930  T
Q  219 tgt 221  Q
    |||    
T  13822929 tgt 13822927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 42709731 - 42709932
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  42709731 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 42709829  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42709830 acatgtctcctcaagggcttaaatctcaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 42709929  T
Q  219 tgt 221  Q
    |||    
T  42709930 tgt 42709932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 15254563 - 15254362
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| |||| || ||||||||||||||| | ||||||||    
T  15254563 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacgtagttgcacaaacaattttatcaaatgacaatt-cgattaaagc 15254465  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15254464 acatgtctccttaagggtttaaatccaaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagttttaagtgag 15254365  T
Q  219 tgt 221  Q
    |||    
T  15254364 tgt 15254362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 10630965 - 10630764
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcacta-acagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||  | ||||| |||||||||| ||||||||    
T  10630965 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaagacatat-tatcatatgacaattt-aattaaag 10630868  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |||||||||||||||||||||||||  |||  |||| |||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  10630867 cacatgtctcctcaagggcttaaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtga 10630768  T
Q  218 gtgt 221  Q
    ||||    
T  10630767 gtgt 10630764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 3354855 - 3354653
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| || || |  ||||| |||||||||| |||||||     
T  3354855 catcaaactcccccacacttgaatagttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaacaatattatcatatgacaattt-aattaaaa 3354757  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||| |||  |||  |||| |||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  3354756 cacatgtctcctcaagggcttcaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtga 3354657  T
Q  218 gtgt 221  Q
    ||||    
T  3354656 gtgt 3354653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 18292153 - 18291954
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||| || || |  ||||| |||||||||| |||||||     
T  18292153 catcaaactcccccacacttgaatctttgcttgtccacaagaaaaaggcataaacatggtagcacaaaacaatattatcatatgacaattt-aattaaaa 18292055  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||| |||  |||  |||| ||||||||||| |||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  18292054 cacatgtctcctcaagggcttcaatttcaagcgtacactaatcacaaagtcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtga 18291955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 17484910 - 17485112
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  || ||    ||||| |||||||||| |||||||     
T  17484910 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaatatggtagcataaaacaagattatcacatgacaattt-aattaaaa 17485008  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |  ||||||||||| ||||||  ||  |||  |||| ||||||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||||||    
T  17485009 cttatgtctcctcaggggcttttatttcaagcgtacactaatcacaaactcaagcatttcttataatccttattcaacccaacaatcaagtttcaagtga 17485108  T
Q  218 gtgt 221  Q
    ||||    
T  17485109 gtgt 17485112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 18081459 - 18081662
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||    ||||| ||||||| || ||| ||||    
T  18081459 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcatagaacaacattatcatatgacaa-ttaaatcaaag 18081557  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    ||||||||||||||| |||||  ||  ||||  |||| ||||||||||||||||||||||||||||||  || ||||||||||| ||||||| | |||||    
T  18081558 cacatgtctcctcaaaggcttttatttcaaagagtacactaatcacaaactcaagcatttcttgtaatcctttttcaacccaacaatcaagtcttaagtg 18081657  T
Q  217 agtgt 221  Q
    |||||    
T  18081658 agtgt 18081662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 45234232 - 45234434
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || |||  || ||    ||||| |||||||||  |||||||     
T  45234232 catcaaactcccccagacttgaatctttgcttgtcctcaagtaaaaggcataaacatggtggcataaaacaagattatcatatgacaatta-aattaaaa 45234330  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |  |||||||||||| |||||  ||  |||  ||||  ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  45234331 ctaatgtctcctcaaaggcttttatttcaagcgtacagtaatcacaaactcaagcatttcttgtaatctttattcaacccaactatcaagtttcaagtga 45234430  T
Q  218 gtgt 221  Q
    ||||    
T  45234431 gtgt 45234434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 38426938 - 38426751
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||| | |   |||| |||||||||| ||||||| |    
T  38426938 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaa-----------taatatt---atcatatgacaattt-aattaaaac 38426854  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||||||||| |||  |||  |||| |||||||||||||||||||||||||||||   |||||||| ||||| |||||||||||||||||    
T  38426853 acatgtctcctcaagggctttaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaagccaacaatcaagtttcaagtgag 38426754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 56580539 - 56580742
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   || |    |||||  |||||| || ||||||||    
T  56580539 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaataacattatcatctgacaa-ttaaattaaag 56580637  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    ||||||||||||||| |||||  ||  ||||  |||| ||||||||||||||||||||||||||||||  || |||||||||   ||||||| | |||||    
T  56580638 cacatgtctcctcaaaggcttttatttcaaagagtacactaatcacaaactcaagcatttcttgtaatcatttttcaacccataaatcaagtcttaagtg 56580737  T
Q  217 agtgt 221  Q
    |||||    
T  56580738 agtgt 56580742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 14653998 - 14654061
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  14653998 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagca 14654061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 8092559 - 8092630
Alignment:
Q  150 gtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||    
T  8092559 gtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagttctaagtgagtgt 8092630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 15865701 - 15865647
Alignment:
Q  21 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15865701 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 15865647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 10650603 - 10650547
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  10650603 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcatagacat 10650547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 15260109 - 15260165
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  15260109 catcaaactcccccacacttgaatctttgcttttcctcaagcaaaaggcatagacat 15260165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 16682969 - 16682913
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  16682969 catcaaactcccccacacttgaatctttgcttgtcatcaagcaaaaggcatagacat 16682913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 15409585 - 15409534
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 70  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15409585 catcaaactcccccacactagaatctttgcttgtcctcaagcaaaaggcata 15409534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 9488878 - 9488934
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||    
T  9488878 catcaaactcccccatacttcaatctttgcttgtcctcaagcaaaaggcatgaacat 9488934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 8092427 - 8092487
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagta 79  Q
    |||||||||  |||| ||||||||||||||||||||||||| ||||| |||||||||||||    
T  8092427 catcaaactttcccatacttgaatctttgcttgtcctcaagaaaaagacataaacatagta 8092487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 17296250 - 17296298
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggca 68  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  17296250 atcaaactcccccatgcttgaatctttgcttgtcctcaagcaaaaggca 17296298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 10602472 - 10602673
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  10602472 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 10602570  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10602571 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 10602670  T
Q  219 tgt 221  Q
    |||    
T  10602671 tgt 10602673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 13504881 - 13505082
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||||    
T  13504881 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcacaaacaattttatcaaatgacaatt-caattaaagc 13504979  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13504980 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 13505079  T
Q  219 tgt 221  Q
    |||    
T  13505080 tgt 13505082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 11947622 - 11947421
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||||    
T  11947622 catcaaactcccccacacttgaatctttacttgtcctcaagcaaaaggcataaacatagtagcacaaacaattttatcaaatgacaatt-caattaaagc 11947524  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11947523 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaaatgag 11947424  T
Q  219 tgt 221  Q
    |||    
T  11947423 tgt 11947421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 16448760 - 16448961
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| || ||||||||||||||| ||||||||||    
T  16448760 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaacaattttatcaaatgacaatt-caattaaagc 16448858  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16448859 acatgtctcctcaagggcttaaattccaaatgtacactaatcacaaattcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 16448958  T
Q  219 tgt 221  Q
    |||    
T  16448959 tgt 16448961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 7600570 - 7600369
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||    
T  7600570 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaattt-aattaaagc 7600472  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||| |||||||    
T  7600471 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagttttaagtgag 7600372  T
Q  219 tgt 221  Q
    |||    
T  7600371 tgt 7600369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 15556942 - 15557143
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  || |||||  ||||||||||||| ||||||||||    
T  15556942 catcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacatagtagcatcaatagttaattcaaatgacaatt-caattaaagc 15557040  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  15557041 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaacttaagcatttcttgaaatctttattcaacccaacgatcaagtttcaagtgag 15557140  T
Q  219 tgt 221  Q
    |||    
T  15557141 tgt 15557143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 9360971 - 9361172
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| || ||||||||||||||| | |||||||     
T  9360971 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaacaattttatcaaatgacaatt-cgattaaagg 9361069  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9361070 acatgtctcctcaagggcttaaattccaaatgtacactaatcacaaattcaagcatttcttgtaatttttattcaacccaacgatcaagttttaagtgag 9361169  T
Q  219 tgt 221  Q
    |||    
T  9361170 tgt 9361172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 16373565 - 16373766
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||  |||||||||    
T  16373565 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaatt--aattaaagc 16373662  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||| ||||||| ||||||||||||||||    
T  16373663 acatgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagcatttcttgaaatctttattctacccaacaatcaagtttcaagtga 16373762  T
Q  218 gtgt 221  Q
    ||||    
T  16373763 gtgt 16373766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 12187076 - 12187277
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||  |||||||||    
T  12187076 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaatt--aattaaagc 12187173  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||| ||||||||||||||||    
T  12187174 acatgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacaatcaagtttcaagtga 12187273  T
Q  218 gtgt 221  Q
    ||||    
T  12187274 gtgt 12187277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 37942593 - 37942392
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||  |||||||||    
T  37942593 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaatt--aattaaagc 37942496  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| || ||| ||||||| ||||||| ||||||||||||||||    
T  37942495 acatgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagtatttcctgaaatctttattctacccaacaatcaagtttcaagtga 37942396  T
Q  218 gtgt 221  Q
    ||||    
T  37942395 gtgt 37942392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 12193491 - 12193691
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagca 119  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||  ||||||||||    
T  12193491 atcaaactcccccatacctgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaatt--aattaaagca 12193588  T
Q  120 catgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||| |||||||||||||||||    
T  12193589 catgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacaatcaagtttcaagtgag 12193688  T
Q  219 tgt 221  Q
    |||    
T  12193689 tgt 12193691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 6815079 - 6814882
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagcacat 122  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||| ||  |||||||||||||    
T  6815079 aaactccctcatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacagtt--aattaaagcacat 6814982  T
Q  123 gtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    |||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  6814981 gtctcctcaagggcataaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagtttcaagtgagtgt 6814882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 10147226 - 10147025
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||||||| ||  |||||||||    
T  10147226 catcaaactcccccatacttgagtctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaatagttaaatcaaatgacagtt--aattaaagc 10147129  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||| ||||||||||||||||    
T  10147128 acatgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacaatcaagtttcaagtga 10147029  T
Q  218 gtgt 221  Q
    ||||    
T  10147028 gtgt 10147025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 15645216 - 15645015
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||||||||  |||||||||||    
T  15645216 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaatagttaaatcaaatgacaa--tcaattaaagc 15645119  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||| ||| ||||||| ||||||| || |||||||||||||    
T  15645118 acatgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagtgtttcttgaaatctttattctacccaacaattaagtttcaagtga 15645019  T
Q  218 gtgt 221  Q
    ||||    
T  15645018 gtgt 15645015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 10160173 - 10160374
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||| ||||||| ||  |||||||||    
T  10160173 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaatagttaaatcgaatgacagtt--aattaaagc 10160270  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||| ||||||||||||||||    
T  10160271 acatgtctcctcaagggctttaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacaatcaagtttcaagtga 10160370  T
Q  218 gtgt 221  Q
    ||||    
T  10160371 gtgt 10160374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 13187418 - 13187618
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagca 119  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||||||| ||  ||||||||||    
T  13187418 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaatagttaaatcaaatgacagtt--aattaaagca 13187515  T
Q  120 catgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||| ||| |||||||||||||    
T  13187516 catgtctcctcaagggctttaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacaatcgagtttcaagtgag 13187615  T
Q  219 tgt 221  Q
    |||    
T  13187616 tgt 13187618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 3245589 - 3245787
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagca 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    ||||| ||||||| |||||||||| |     
T  3245589 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaacaagattatcatatgacaa-ttcaattaaaact 3245687  T
Q  120 catgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagt 219  Q
     |||||||||||| |||||  ||  |||  |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  3245688 tatgtctcctcaaaggcttttatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtctcaagtgagt 3245787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 2721511 - 2721311
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||    ||| | ||||||||| |||||||| |    
T  2721511 catcaaactcccc-acacttgaatctttgcttgtcctcaagcaaaaggcataaacatagcagcataaacaagattataatatgacaatt-caattaaaac 2721414  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
      |||||||||||| |||||  |   |||  |||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  2721413 ttatgtctcctcaaaggcttttaattcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtgag 2721314  T
Q  219 tgt 221  Q
    |||    
T  2721313 tgt 2721311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 13097919 - 13097718
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||  ||||    ||    |||||||||| ||||||| |    
T  13097919 catcaaactcccccacatttgaatctttgcttgtcctcaagtaaaaggcataaacatggtagcataaacaagattacttcatgacaattt-aattaaaac 13097821  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||| ||||| |||  ||| ||||| |||||||||||||||||||||  |||||||  || ||||||||||| |||||||||||||||||    
T  13097820 acatgtctcctcaaaggctttaatttcaagtgtacactaatcacaaactcaagcattctttgtaatcctttttcaacccaacaatcaagtttcaagtgag 13097721  T
Q  219 tgt 221  Q
    |||    
T  13097720 tgt 13097718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 4382961 - 4382758
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||    ||||| ||||||| || ||| ||||    
T  4382961 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcatagaacaacattatcatatgacaa-ttaaatcaaag 4382863  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    ||||||||||||||| |||||  ||  ||||  |||| ||||||||||||||||||||||||||||||  || ||||||||||| ||||||| | |||||    
T  4382862 cacatgtctcctcaaaggcttttatttcaaagagtacactaatcacaaactcaagcatttcttgtaatcctttttcaacccaacaatcaagtcttaagtg 4382763  T
Q  217 agtgt 221  Q
    |||||    
T  4382762 agtgt 4382758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 13001425 - 13001628
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||    ||||| ||||||| || ||| ||||    
T  13001425 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaacaacattatcatatgacaa-ttaaatcaaag 13001523  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    ||||||||||||||| |||||  ||  ||||  |||| ||||||||||||||||||||||||||||||  || ||||||||||| ||||||| | |||||    
T  13001524 cacatgtctcctcaaaggcttttatttcaaagagtacactaatcacaaactcaagcatttcttgtaatcctttttcaacccaacaatcaagtcttaagtg 13001623  T
Q  217 agtgt 221  Q
    |||||    
T  13001624 agtgt 13001628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 10546936 - 10547141
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagtta-tatcaaatgacaatttcaatt-aaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||  | || ||||| |||||||||  ||||  ||    
T  10546936 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaacgatattatcatatgacaatt--aattcgaa 10547033  T
Q  117 gcacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaat--ttttattcaacccaacgatcaagtttcaa 213  Q
    |||||||||||||||| |||||  ||  ||||  |||| ||||||||||||||||||||||||||||||  |||| ||||||||||| ||||||| | ||    
T  10547034 gcacatgtctcctcaaaggcttttatttcaaagagtacactaatcacaaactcaagcatttcttgtaatcctttttttcaacccaacaatcaagtcttaa 10547133  T
Q  214 gtgagtgt 221  Q
    ||||||||    
T  10547134 gtgagtgt 10547141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 20156515 - 20156715
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaaca-gttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||  |||| | || |||| |||||||||  |||||||     
T  20156515 catcaaactcccccacacttgaatctt-gcttgtcctcaagcaaaatgcataaacatggtagcataaacaagata-atcatatgacaatta-aattaaaa 20156611  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    | ||||||||||||| |||||  ||  ||| | ||| |||||||||| ||||||||||||||||||  ||||||||||||||| ||||||| ||||||||    
T  20156612 ctcatgtctcctcaaaggcttttatttcaattttacactaatcacaagctcaagcatttcttgtaaactttattcaacccaacaatcaagtctcaagtga 20156711  T
Q  218 gtgt 221  Q
    ||||    
T  20156712 gtgt 20156715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 1993011 - 1992810
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||| | | ||||||||||||||||| | |||||||||||||||||||||||||||||  ||||    ||||| |||||||||  ||||||| |    
T  1993011 catcaaactctctcccacttgaatctttgcttatgctcaagcaaaaggcataaacatagtagcataaacaagattatcatatgacaatta-aattaaaac 1992913  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
      |||||||||||| |||||  ||  |||  |||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||    
T  1992912 ttatgtctcctcaaaggcttttatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaactcaacaatcaaatttcaagtgag 1992813  T
Q  219 tgt 221  Q
    |||    
T  1992812 tgt 1992810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 13690816 - 13690615
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||  ||||    |||   |||||||||| ||||||| |    
T  13690816 catcaaactcccccacacttgaatctttagttgtcatcaagcaaaaggcataaacatggtagcataaacaagattatttcatgacaattt-aattaaaac 13690718  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||| ||||| |||  ||| ||| | |||||||||||||||||||||  |||||||  || ||||||||||| |||||||||||| ||||    
T  13690717 acatgtctcctcaaaggctttaatttcaagtgtccactaatcacaaactcaagcattctttgtaatcctttttcaacccaacaatcaagtttcaaatgag 13690618  T
Q  219 tgt 221  Q
    |||    
T  13690617 tgt 13690615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 11398424 - 11398222
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaatt-aaag 117  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||  ||||    || || | ||||||| ||||| |||     
T  11398424 catcaaactcccccacacttgaatatttgcttgtcctcaagcaaaaggcataaatatagcagcataaacaagattaacatacgacaatt-caattgaaaa 11398326  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |  ||||||| |||| |||||  ||   ||  |||| ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  11398325 cttatgtctcttcaaaggcttttatttaaagcgtacactaatcataaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtga 11398226  T
Q  218 gtgt 221  Q
    ||||    
T  11398225 gtgt 11398222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 14348588 - 14348790
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaac-agttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||  | | ||   || || ||||||| ||||||||||     
T  14348588 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggtaacataagcaagacttaacatatgacaa-ttcaattaaaa 14348686  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |   ||||||||||| |||||  ||  |||  |||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||  ||||||    
T  14348687 cttgtgtctcctcaaaggcttttatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaaccaaacaatcaagttctaagtga 14348786  T
Q  218 gtgt 221  Q
    ||||    
T  14348787 gtgt 14348790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 22637908 - 22637706
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||||||||| ||||| ||||||  || ||    ||||| ||||||||| ||||||||     
T  22637908 catcaaactcccctacacttgaatctttacttgtgctcaagcaaaaggcatcaacatggtagcataaaacaagattatcatatgacaatt-caattaaaa 22637810  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |  ||| |||||||| | |||  ||  |||  |||| ||||||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  22637809 cttatgcctcctcaaagacttttatttcaagcgtacactaatcacaaacttaagcaattcttgtaatctttattcaacccaacaatcaagtttcaagtga 22637710  T
Q  218 gtgt 221  Q
    ||||    
T  22637709 gtgt 22637706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 3279399 - 3279197
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagt-tatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| | ||  |||| |   || || ||||||| || |||||||     
T  3279399 catcaaactcccccacacttgaatctttgtttgtcctcaagcaaaaggcatagacatagcaacataaacaatacttaacatatgacaa-ttaaattaaaa 3279301  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |   ||||||||||| | |||  ||  ||| ||||| |||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||  ||||||    
T  3279300 cttgtgtctcctcaaagacttttatttcaagtgtacactaatcacaaactcgaacatttcttgtaatctttattcaacccaacaatcaagttctaagtga 3279201  T
Q  218 gtgt 221  Q
    ||||    
T  3279200 gtgt 3279197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 17388045 - 17387843
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||   ||||    |||||  |||||| ||||||||||     
T  17388045 catcaaactcccccacacttgaatctttgcttgtccttaagcaaaaggcatcaacatggtagcataaaacaagattatcatgtgacaa-ttcaattaaaa 17387947  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |  || ||||||||| |||||  ||  |||    || ||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||| ||||||    
T  17387946 cttatatctcctcaaaggcttttatttcaagcacacactaatcacaaactcaagcaattcttgaaatctttattcaacccaacaatcaagtttaaagtga 17387847  T
Q  218 gtgt 221  Q
    ||||    
T  17387846 gtgt 17387843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 12160207 - 12160409
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||   || |    ||||| ||||||| || ||||||||    
T  12160207 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaatgcataaacatggtggcataaaataacattatcatatgacaa-ttaaattaaag 12160305  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
     ||||||||||||||  | ||  ||  ||||  |||| ||||| | ||||||||||||||||||||||| || ||||||||||| ||||||| | |||||    
T  12160306 aacatgtctcctcaaatgtttttatttcaaagagtacactaataaaaaactcaagcatttcttgtaattctt-ttcaacccaacaatcaagtcttaagtg 12160404  T
Q  217 agtgt 221  Q
    |||||    
T  12160405 agtgt 12160409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 16655897 - 16655812
Alignment:
Q  137 ttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  16655897 ttaaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagtttcaagtgagtgt 16655812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 27356728 - 27356784
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27356728 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 27356784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 13601277 - 13601220
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacata 76  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13601277 catcaaactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaacata 13601220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 3339226 - 3339282
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3339226 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 3339282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 12776534 - 12776590
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12776534 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 12776590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 13136210 - 13136266
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13136210 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 13136266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 20584318 - 20584262
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20584318 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 20584262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 15946824 - 15946773
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15946824 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 15946773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 17045902 - 17045847
Alignment:
Q  27 tcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17045902 tcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaaaatagtagca 17045847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 17048062 - 17048007
Alignment:
Q  27 tcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17048062 tcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaaaatagtagca 17048007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 14445768 - 14445826
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatag 77  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  14445768 catcaaactcccccacacttgaatctttgcttgtcctaaagcaaaaggcatagacatag 14445826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 15619283 - 15619339
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  15619283 catcaaactgccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 15619339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 13195458 - 13195514
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  13195458 catcaaactcccacacacttgaatctttgcttgtcctcaagcaaaatgcatagacat 13195514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 8686387 - 8686442
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaaca 74  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  8686387 catcaaactcccccatacttgaatctttgcttgtcctcaaacaaaaagcataaaca 8686442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 20225754 - 20225817
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||| ||||    
T  20225754 catcaaactcccccatacttaaatctttgtttgtcctcaagcaaaagacataaacatagcagca 20225817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 13068357 - 13068306
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 70  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  13068357 catcaaactcccccacacttgaatctttacttgtcctcaaccaaaagacata 13068306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 50
Target Start/End: Complemental strand, 2005530 - 2005499
Alignment:
Q  19 catcaaactcccccacacttgaatctttgctt 50  Q
    ||||||||||||||||||||||||||||||||    
T  2005530 catcaaactcccccacacttgaatctttgctt 2005499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 16703363 - 16703307
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||| |||  |||||||||||||||  ||| |||||||||| ||||||||    
T  16703363 catcaaactcctccatgcttgaatctttgcttaacctaaagcaaaaggtataaacat 16703307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 22665277 - 22665076
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  22665277 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 22665179  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22665178 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 22665079  T
Q  219 tgt 221  Q
    |||    
T  22665078 tgt 22665076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 117758 - 117557
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| | |||| || ||||||||||||||| | ||||||||    
T  117758 catcaaactcccccacacttgcatatttgcttgtcctcaagcaaaaggcataaacgtagtagctcaaacaattttatcaaatgacaatt-cgattaaagc 117660  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  117659 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 117560  T
Q  219 tgt 221  Q
    |||    
T  117559 tgt 117557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 22044660 - 22044861
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||    
T  22044660 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaattt-aattaaagc 22044758  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||||||    
T  22044759 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagtttcaagtgag 22044858  T
Q  219 tgt 221  Q
    |||    
T  22044859 tgt 22044861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 25357726 - 25357525
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||    
T  25357726 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaattt-aattaaagc 25357628  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||||||    
T  25357627 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagtttcaagtgag 25357528  T
Q  219 tgt 221  Q
    |||    
T  25357527 tgt 25357525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 11615 - 11816
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| | |||| || ||||||||||||||| | ||||||||    
T  11615 catcaaactcccccacacttgcctctttgcttgtcctcaagcaaaaggcataaacgtagtagctcaaacaattttatcaaatgacaatt-cgattaaagc 11713  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11714 acatatctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagttttaagtgag 11813  T
Q  219 tgt 221  Q
    |||    
T  11814 tgt 11816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 16775866 - 16775665
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||  |||||||||    
T  16775866 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaatta-aattaaagc 16775768  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||| |||||||    
T  16775767 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagttttaagtgag 16775668  T
Q  219 tgt 221  Q
    |||    
T  16775667 tgt 16775665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 17590622 - 17590421
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||  |||||||||    
T  17590622 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcagcaacagttaaatcaaatgacaatta-aattaaagc 17590524  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | ||| | ||||| ||||||||||||||||| |||||||    
T  17590523 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagtatttctggaaatctctattctacccaacgatcaagttttaagtgag 17590424  T
Q  219 tgt 221  Q
    |||    
T  17590423 tgt 17590421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 24795285 - 24795486
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||  | |||||| ||||||||||||||| |||||||||    
T  24795285 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacgtagtaccatcagcagttaaatcaaatgacaattt-aattaaagc 24795383  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||| |||||||    
T  24795384 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagttttaagtgag 24795483  T
Q  219 tgt 221  Q
    |||    
T  24795484 tgt 24795486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 27627796 - 27627594
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||  |||||||||||| || |||||||||    
T  27627796 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcgacagttgaatcaaatgacaaatt-aattaaagc 27627698  T
Q  119 acatgtctcctcaagggcttaaatcc-caaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||    
T  27627697 acatgtctcctcaagggcttaaatcctaaaatgtacattaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagtttcaagtga 27627598  T
Q  218 gtgt 221  Q
    ||||    
T  27627597 gtgt 27627594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 25144757 - 25144959
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |  ||||| |||||||||| |||||||     
T  25144757 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaacaatattatcatatgacaattt-aattaaaa 25144855  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||| |||  |||  |||| |||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  25144856 cacatgtctcctcaagggcttcaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtga 25144955  T
Q  218 gtgt 221  Q
    ||||    
T  25144956 gtgt 25144959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 5500265 - 5500467
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcac-taacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||| |  ||||| |||||||||| |||||||     
T  5500265 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaacaatattatcatatgacaattt-aattaaaa 5500363  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||| |||  |||  |||| |||||||||||||||||||||||  ||||   ||||||||| |||| ||||||||||||||||    
T  5500364 cacatgtctcctcaagggcttcaatttcaagcgtacactaatcacaaactcaagcatttcacgtaaaccttattcaactcaacaatcaagtttcaagtga 5500463  T
Q  218 gtgt 221  Q
    ||||    
T  5500464 gtgt 5500467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 25804267 - 25804468
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    || || ||||||| |||||||||| |    
T  25804267 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagcagcacaaacaagattaacatatgacaa-ttcaattaaaac 25804365  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
      |||| ||||||| |||||  |   |||  |||| ||||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  25804366 ttatgtatcctcaaaggcttttaattcaagcgtacactaatcacaaattcaagcatttcttgtaatctttattcaacccaacaatcaaatttcaagtgag 25804465  T
Q  219 tgt 221  Q
    |||    
T  25804466 tgt 25804468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 25370890 - 25371086
Alignment:
Q  24 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcact-aacag--ttatatcaaatgacaatttcaattaaagcac 120  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||  ||||||   ||||||| |||||| ||| | |    
T  25370890 aactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaacatagtaacaataaacaggattatat---atgacaa-ttcaatcaaaactc 25370985  T
Q  121 atgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtg 220  Q
    |||||||||||| ||||| |||  |||  |||| ||||| ||||||||||||||||||| |||| ||||||||||||||| ||||||||  |||||||||    
T  25370986 atgtctcctcaaaggctttaatttcaagcgtacactaattacaaactcaagcatttcttataatctttattcaacccaacaatcaagttctaagtgagtg 25371085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 23798922 - 23799123
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||     ||  || ||||||| |||||| ||| |    
T  23798922 catcaaactcccccacacttgaatctttgattatcctcaagcaaaaggcataaacatagtagcataaaacaagattacatatgacaa-ttcaatcaaaac 23799020  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
     ||||||||||||| |||||  ||  |||  |||| ||||||||||||||||||||||||||||   ||||||||||||||| ||||||||  |||||||    
T  23799021 tcatgtctcctcaaaggcttttatttcaagcgtacactaatcacaaactcaagcatttcttgtatcctttattcaacccaacaatcaagttctaagtgag 23799120  T
Q  219 tgt 221  Q
    |||    
T  23799121 tgt 23799123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 208
Target Start/End: Complemental strand, 23644160 - 23643970
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||   || |    ||||| ||||||| || ||||||||    
T  23644160 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaaataacattatcatatgacaa-ttaaattaaag 23644062  T
Q  118 cacatgtctcctcaagggcttaaatcccaa-atgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagt 208  Q
    ||| ||||||||||| |||||  ||  |||   |||| ||||||||||||||||||||||| ||||||  || |||||||| || |||||||    
T  23644061 cacgtgtctcctcaaaggcttttatttcaaggagtacactaatcacaaactcaagcatttcctgtaatcctttttcaaccctacaatcaagt 23643970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 24502251 - 24502175
Alignment:
Q  145 caaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  24502251 caaacgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtgagtgt 24502175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 24178193 - 24178348
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||  ||||    ||||| |||||||||| | | ||| |    
T  24178193 catcaaactcccccacacttgaatctttgcttgtcttcaaacaaaaggcataaacatagcagcataaacaagattatcatatgacaatttaattaaaaac 24178292  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcat 174  Q
      ||||||||||||  ||||  ||  |||| |||| ||||||||||||||||||||    
T  24178293 ttatgtctcctcaaaagcttttatttcaaacgtacactaatcacaaactcaagcat 24178348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 23159385 - 23159441
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23159385 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 23159441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 23570642 - 23570698
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23570642 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 23570698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 27631711 - 27631655
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27631711 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 27631655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 27768816 - 27768872
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27768816 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 27768872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 24171561 - 24171510
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24171561 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 24171510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 24506865 - 24506802
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||| ||||    
T  24506865 catcaaactcccccacacttgaatcttttattgtcctcaagcaaaagacataaacatagcagca 24506802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 23257570 - 23257625
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  23257570 catcaaactcccc-atacttgaatctttgcttgtcctcaagcaaaaggcataaacat 23257625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 24321380 - 24321328
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  24321380 aaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcgtaaacat 24321328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 25337651 - 25337714
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| |||| ||||    
T  25337651 catcaaattcccccatacttgaatctttgcttgtcctcaagaaaaaggcataaatatagcagca 25337714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 23648165 - 23648123
Alignment:
Q  38 tgaatctttgcttgtcctcaagcaaaaggcataaacatagtag 80  Q
    ||||||||||||||||||||||||||| ||||| |||||||||    
T  23648165 tgaatctttgcttgtcctcaagcaaaatgcatagacatagtag 23648123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 29955913 - 29955868
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 65  Q
    |||||||| ||| | |||||||||||||||||||||||||||||||    
T  29955913 atcaaacttcccgatacttgaatctttgcttgtcctcaagcaaaag 29955868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 19805618 - 19805662
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 64  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||    
T  19805618 atcaaactcccccacactagaaccattgcttgtcctcaagcaaaa 19805662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 21512567 - 21512615
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggca 68  Q
    |||||| |||||||  |||||||| ||||||||||||||||||||||||    
T  21512567 atcaaattcccccatgcttgaatccttgcttgtcctcaagcaaaaggca 21512615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 24019068 - 24019123
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||| ||||||| ||||||||||||  |||||||||| |||||| |||||||||    
T  24019068 atcaaattcccccatacttgaatctttttttgtcctcaaacaaaagacataaacat 24019123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 17334606 - 17334648
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 62  Q
    |||||||||||||||||||||| | ||| ||||||||||||||    
T  17334606 atcaaactcccccacacttgaaccattgattgtcctcaagcaa 17334648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 4e-99; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 20595831 - 20596032
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  20595831 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcacaaacggttatatcaaatgacaatt-caattaaagc 20595929  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20595930 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 20596029  T
Q  219 tgt 221  Q
    |||    
T  20596030 tgt 20596032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 20602117 - 20602318
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  20602117 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcacaaacggttatatcaaatgacaatt-caattaaagc 20602215  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20602216 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 20602315  T
Q  219 tgt 221  Q
    |||    
T  20602316 tgt 20602318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 20608408 - 20608609
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  20608408 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcacaaacggttatatcaaatgacaatt-caattaaagc 20608506  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20608507 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 20608606  T
Q  219 tgt 221  Q
    |||    
T  20608607 tgt 20608609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 15735749 - 15735548
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  15735749 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaccaacagttatatcaaatgacaatt-caattaaagc 15735651  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  15735650 acatgtctcctcaagggcttaaatcccaagtgtacactaatcacaaactcaagtgtttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 15735551  T
Q  219 tgt 221  Q
    |||    
T  15735550 tgt 15735548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 44 - 221
Target Start/End: Original strand, 23710701 - 23710878
Alignment:
Q  44 tttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagcacatgtctcctcaagggcttaaatc 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23710701 tttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagcacatgtctcctcaagggcttaaatc 23710800  T
Q  144 ccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23710801 ccaaatgtacactaatcacaaactcaagcatttcttgtaatttttatttaacccaacgatcaagtttcaagtgagtgt 23710878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 23748266 - 23748065
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||  |||||||||    
T  23748266 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaatta-aattaaagc 23748168  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||| |||||||    
T  23748167 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagttttaagtgag 23748068  T
Q  219 tgt 221  Q
    |||    
T  23748067 tgt 23748065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 24940749 - 24940548
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||    
T  24940749 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaattt-aattaaagc 24940651  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||    
T  24940650 acatgtctcctcaagggcttaaatcccaaaatgtaaactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagtttcaagtga 24940551  T
Q  218 gtg 220  Q
    |||    
T  24940550 gtg 24940548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 18073115 - 18072914
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||||||||  |||||||||||    
T  18073115 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaatagttaaatcaaatgacaa--tcaattaaagc 18073018  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||| || |||||||||||||    
T  18073017 acatgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacaattaagtttcaagtga 18072918  T
Q  218 gtgt 221  Q
    ||||    
T  18072917 gtgt 18072914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 37 - 221
Target Start/End: Complemental strand, 20622359 - 20622176
Alignment:
Q  37 ttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagcacatgtctcctcaagggc 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||| |||||||||||||||||||||||||||    
T  20622359 ttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacaattaaatcaaatgacaattt-aattaaagcacatgtctcctcaagggc 20622261  T
Q  137 ttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||| ||||||||||    
T  20622260 ttaaatcccaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacgatcaagttttaagtgagtgt 20622176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 24953174 - 24953375
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||  || ||||| ||||||||||||||  |||||||||    
T  24953174 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggtataaacatagtagcatcaatagttaaatcaaatgacaatt--aattaaagc 24953271  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||| ||||||||||||||||    
T  24953272 acatgtctcctcaagggcttaaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacaatcaagtttcaagtga 24953371  T
Q  218 gtgt 221  Q
    ||||    
T  24953372 gtgt 24953375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 20790714 - 20790915
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||||||| ||  |||||||||    
T  20790714 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaatagttaaatcaaatgacagtt--aattaaagc 20790811  T
Q  119 acatgtctcctcaagggcttaaatccc-aaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||| ||| ||||||||||||| ||    
T  20790812 acatgtctcctcaagggctttaatcccaaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacctaacaatcaagtttcaagcga 20790911  T
Q  218 gtgt 221  Q
    ||||    
T  20790912 gtgt 20790915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 23600636 - 23600838
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcacta-acagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| |  ||||| |||||||||| ||||| |     
T  23600636 catcaaattcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaagacaatattatcatatgacaattt-aattagaa 23600734  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |||||||||||||||||||||||||  |||  |||| |||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  23600735 cacatgtctcctcaagggcttaaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtga 23600834  T
Q  218 gtgt 221  Q
    ||||    
T  23600835 gtgt 23600838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 24219961 - 24219759
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| || || |  ||||| |||||||||| |||||||     
T  24219961 catcaaactcccccacacttgagtctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaacaatattatcatatgacaattt-aattaaaa 24219863  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||| |||  |||  |||| |||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  24219862 cacatgtctcctcaagggcttcaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtga 24219763  T
Q  218 gtgt 221  Q
    ||||    
T  24219762 gtgt 24219759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 20444843 - 20445041
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttat-atcaaatgacaatttcaattaaagcaca 121  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||| ||    ||| |||| |||||||||| ||||||| ||||    
T  20444843 aaactcccccacacttgaatctttgattgtcctcaagcaaaaggcataaatatggtagcacaaaataatattatcatatgacaattt-aattaaaacaca 20444941  T
Q  122 tgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    ||||||||||||||||| |||  |||  |||| |||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  20444942 tgtctcctcaagggcttcaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaactttattcaacccaacaatcaagtttcaagtgagtgt 20445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 21387605 - 21387410
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaatt-aaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||  |||    || || ||||||||| ||||| |||     
T  21387605 catcaaactcccccacacttgaatctttgcttgtcctcaagaaaaatgcataaacatagcagcacacacaagactaacatatgacaatt-caattgaaaa 21387507  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaag 214  Q
    |  |||||||||||| | |||  ||  |||  |||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  21387506 cttatgtctcctcaaagactttcatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaag 21387410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 20916456 - 20916657
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||| |||| ||||| |||| |||||||||||||||||||||| ||||||  |||  ||     ||  || | |||||||  ||| ||| |    
T  20916456 catcaaactcccctacacatgaatttttggttgtcctcaagcaaaaggcatagacatagctgcataaaataagattacataggacaatta-aatcaaaac 20916554  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
     ||||||||||||| |||||  ||  |||  |||| |||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  20916555 tcatgtctcctcaaaggcttttatttcaaccgtacactaatcacgaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtgag 20916654  T
Q  219 tgt 221  Q
    |||    
T  20916655 tgt 20916657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 22948596 - 22948525
Alignment:
Q  150 gtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  22948596 gtacactaatcacaaactcaagcatttcttgtaatcttttttcaacccaacaatcaagtttcaagtgagtgt 22948525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 20575630 - 20575517
Alignment:
Q  107 ttcaattaaagcacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaa 206  Q
    |||||| ||| | ||||||||||||| |||||  ||  |||  |||| |||||||||||||||||||||||||||| | |||||||||||| || |||||    
T  20575630 ttcaatcaaaactcatgtctcctcaaaggcttttatttcaagcgtacactaatcacaaactcaagcatttcttgtagtctttattcaacccgacaatcaa 20575531  T
Q  207 gtttcaagtgagtg 220  Q
    ||||||||||||||    
T  20575530 gtttcaagtgagtg 20575517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 22317513 - 22317569
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22317513 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 22317569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 25006808 - 25006864
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25006808 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 25006864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 30759655 - 30759711
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30759655 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 30759711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 18484212 - 18484275
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  18484212 catcaaactccccaacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagca 18484275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 25116171 - 25116221
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcat 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25116171 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcat 25116221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 26847859 - 26847803
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  26847859 catcaaactcccccacacttgaatctttgcttgtcctcaaccaaaaggcatagacat 26847803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 25175261 - 25175306
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25175261 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25175306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 22855775 - 22855723
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  22855775 aaactcccccacacttgaatctttgcttgtcctcaagcaaaagacatagacat 22855723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 27270607 - 27270563
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  27270607 atcaaactcccccacacttgaatcattgcttgtcctcaagcaaaa 27270563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 17412784 - 17412736
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggca 68  Q
    |||||||||||||| ||||||||| ||| ||||| ||||||||||||||    
T  17412784 atcaaactcccccatacttgaatcattgtttgtcgtcaagcaaaaggca 17412736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 4e-99; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 27047089 - 27046888
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  27047089 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagctccaacagttatatcaaatgacaatt-caattaaagc 27046991  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27046990 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 27046891  T
Q  219 tgt 221  Q
    |||    
T  27046890 tgt 27046888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 17094601 - 17094802
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||  ||||||||||||| ||||||||||    
T  17094601 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaatagttaattcaaatgacaatt-caattaaagc 17094699  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  17094700 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaacttaagcatttcttgaaatctttattcaacccaacgatcaagtttcaagtgag 17094799  T
Q  219 tgt 221  Q
    |||    
T  17094800 tgt 17094802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 21798662 - 21798864
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||  | |||||||    
T  21798662 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaattaaatttaaagc 21798761  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||    
T  21798762 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagtatttcttgaaatttttattctacccaacgatcaagttttaagtgag 21798861  T
Q  219 tgt 221  Q
    |||    
T  21798862 tgt 21798864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 20237671 - 20237470
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| || | || ||||||||||||||| | ||||||||    
T  20237671 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaatgcagtagcacaaataattttatcaaatgacaatt-cgattaaagc 20237573  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  20237572 acatgtctcctcaagggcttaaatcccaaatgtacactaaccacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagctttaagtgag 20237473  T
Q  219 tgt 221  Q
    |||    
T  20237472 tgt 20237470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 209
Target Start/End: Complemental strand, 8653327 - 8653142
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcact-aaca--gttatatcaaatgacaatttcaattaaagca 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||   ||||||   ||||||| |||||| ||| |     
T  8653327 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcaataaacaagattatat---atgacaa-ttcaatcaaaact 8653232  T
Q  120 catgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtt 209  Q
    ||||||||||||| ||||| |||  |||  |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  8653231 catgtctcctcaaaggctttaatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtt 8653142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 52938621 - 52938823
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||   ||||    ||||| ||||||| || ||| |||     
T  52938621 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataatcatggtagcataaaacaacattatcatatgacaa-ttaaatcaaat 52938719  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||| |||||  ||  |||  |||| ||||||||||||||||||||||||||||||  || ||||||||||| ||||||| | ||||||    
T  52938720 cacatgtctcctcaaaggcttttatttcaagagtacactaatcacaaactcaagcatttcttgtaatcctttttcaacccaacaatcaagtcttaagtga 52938819  T
Q  218 gtgt 221  Q
    ||||    
T  52938820 gtgt 52938823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 19364244 - 19364043
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||  ||     ||  || ||||||| |||||| ||| |    
T  19364244 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaatgcatagacatagcagcataaaacaagattacatatgacaa-ttcaatcaaaac 19364146  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
     ||||||||||||| |||||  ||  |||  |||| |||||||||||||||||||||||||||| | ||||||||||||||| ||| ||||  |||||||    
T  19364145 tcatgtctcctcaaaggcttttatttcaagcgtacactaatcacaaactcaagcatttcttgtagtctttattcaacccaacaatccagttctaagtgag 19364046  T
Q  219 tgt 221  Q
    |||    
T  19364045 tgt 19364043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 3990154 - 3989951
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||   ||||    ||||| ||||||| || ||| ||||    
T  3990154 catcaaactcccccatacttgaatctttgtttgtcctcaagcaaaaggcataaacatggtagcataaaacaacattatcatatgacaa-ttaaatcaaag 3990056  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    |||||||||| |||| |||||  ||  ||||  || | ||||||||||||||||||||||||||||||  || ||||||||||| ||||||| | |||||    
T  3990055 cacatgtctcgtcaaaggcttttatttcaaagagtgcactaatcacaaactcaagcatttcttgtaatcctttttcaacccaacaatcaagtcttaagtg 3989956  T
Q  217 agtgt 221  Q
    |||||    
T  3989955 agtgt 3989951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 14070720 - 14070632
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatt 107  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  14070720 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcatcaacagttaaatcaaatgacaatt 14070632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 19875648 - 19875702
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatag 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19875648 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatag 19875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 21784472 - 21784535
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  21784472 catcaaactcccccacacttgaatatttgcttgtcctcaagcaaaaggcatagacatagcagca 21784535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 4027895 - 4027832
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  4027895 catcaaactcccccacccttgaatctttgcttttcctcaagcaaaaggcatagacatagcagca 4027832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 16382578 - 16382631
Alignment:
Q  22 caaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  16382578 caaactcccccatacttgaatctttgcttgtcctcaagcaaaaggaataaacat 16382631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 8947515 - 8947578
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| |||| |||||| ||||    
T  8947515 catcaaactcccccacacttgaatctttacttgtcctcaaggaaaagacatagacatagcagca 8947578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 18478234 - 18478276
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 62  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  18478234 atcaaactcccctacacttgaaccattgcttgtcctcaagcaa 18478276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 15893 - 15692
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  15893 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcacaaacagttttatcaaatgacaatt-caattaaagc 15795  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15794 acatgtctcctcaagggcttaaatctcaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 15695  T
Q  219 tgt 221  Q
    |||    
T  15694 tgt 15692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 1253 - 1052
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||  | |||||| ||||||||||||||| |||||||||    
T  1253 catcaaactcccccatacttgaatctttgcttttcctcaagcaaaaggcataaacgtagtagcatcagcagttaaatcaaatgacaattt-aattaaagc 1155  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||||| |||||||||||||||||    
T  1154 acatgtctcctcaagggcttaaatcccaaatgtacactaatcacaaactcaagtatttcttgaaatctttattctacccaacaatcaagtttcaagtgag 1055  T
Q  219 tgt 221  Q
    |||    
T  1054 tgt 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 3524 - 3461
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3524 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacgtagtagca 3461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 615 - 805
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| || ||||||| |||| || |||||||| |||||| | ||||||||    
T  615 catcaaactcccccacacttgaatctttgcttgtcctaaagcaaaaagcataaatatggtagcacaaacaattttatcaaatcacaatt-cgattaaagc 713  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagttt 210  Q
    ||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  714 acaagtctcctcaagggattaaatcccaaatgtacactaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagttt 805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 428 - 227
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |  ||||  |||||||||| |||||||      
T  428 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaacaatattatcgtatgacaattt-aattaaaat 330  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||||||||| |||   ||  |||| ||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  329 acatgtctcctcaagggctttaatttaaagcgtacactaatcacaaactgaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtgag 230  T
Q  219 tgt 221  Q
    |||    
T  229 tgt 227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 2852 - 3054
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| || || |  ||||| |||||||||| |||||||     
T  2852 catcaaactcccacatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaacaatattatcatatgacaattt-aattaaaa 2950  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    |||||||||||| |||||||| |||  ||  ||||| |||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  2951 cacatgtctccttaagggctttaatttcatgtgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtga 3050  T
Q  218 gtgt 221  Q
    ||||    
T  3051 gtgt 3054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 11264 - 11064
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |  ||||| |||||||||| ||||||| |    
T  11264 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaacaatattatcatatgacaattt-aattaaaac 11166  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||||||||| |||   ||  |||| |||||||||||||||||||||||||||||   |||||||||||||  || ||||||||||||||    
T  11165 acatgtctcctcaagggctttaattttaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaaaaattaagtttcaagtgag 11066  T
Q  219 tg 220  Q
    ||    
T  11065 tg 11064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 251870 - 252072
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||| || || |  |||||  ||||||||| |||||||     
T  251870 catcaaactcccccacacttgaatctttacttgtcctcaagcaaatggcataaacatggtagcacaaaacaatattatcatttgacaattt-aattaaaa 251968  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||| |||  |||  |||| ||| |||||||||||||||||||||||||   |||||||||||||| |||||||| |||||||    
T  251969 cacatgtctcctcaagggctttaatttcaagcgtacactagtcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagttccaagtga 252068  T
Q  218 gtgt 221  Q
    ||||    
T  252069 gtgt 252072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 2287 - 2489
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  || ||    ||||| |||||||||  ||| ||||    
T  2287 catcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaacaacattatcatatgacaatta-aatcaaag 2385  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||| |||||  ||  |||  |||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| | ||||||    
T  2386 cacatgtctcctcaaaggcttttatttcaagagtacactaatcacaaactcaagcatttcttgtaatcttttttcaacccaacaatcaagtcttaagtga 2485  T
Q  218 gtgt 221  Q
    ||||    
T  2486 gtgt 2489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 14662 - 14863
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||  |||| |  ||||| |||| ||||| ||||||| |    
T  14662 catcaaactcccccatacttgaatctttgcttgtcctcaagaaaaaggcataaacatggtagcataaacaatattatcatatgaaaattt-aattaaaac 14760  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    |||||||||||||||||||| |||  |||  ||||  || ||| |||||||||||||||||||||   ||||  |||||||| |||||||||||||||||    
T  14761 acatgtctcctcaagggctttaatttcaagcgtacattattcataaactcaagcatttcttgtaaaccttatgaaacccaacaatcaagtttcaagtgag 14860  T
Q  219 tgt 221  Q
    |||    
T  14861 tgt 14863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 1041 - 838
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaa-cagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||  |    ||||| ||||||| || ||||||||    
T  1041 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaattaacattatcatatgacaa-ttaaattaaag 943  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    ||||||||||||||| |||||  ||  ||||  |||| ||||||||||||||||||||||||||||||  || ||||||||||| ||||||| | |||||    
T  942 cacatgtctcctcaaaggcttttatttcaaagagtacactaatcacaaactcaagcatttcttgtaatcctttttcaacccaacaatcaagtcttaagtg 843  T
Q  217 agtgt 221  Q
    |||||    
T  842 agtgt 838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 121162 - 120960
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcac-taacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  || | |  | | | |||||||||| |||| ||     
T  121162 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaataatatttttatatgacaattt-aattgaaa 121064  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtga 217  Q
    ||||||||||||||||||||| |||  |||  |||| ||||||||||||||||| |||||||||||   |||||||||||||| | |||||| ||||||     
T  121063 cacatgtctcctcaagggctttaatttcaagcgtacactaatcacaaactcaagtatttcttgtaaaccttattcaacccaacaaccaagttccaagtgt 120964  T
Q  218 gtgt 221  Q
    ||||    
T  120963 gtgt 120960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 687 - 486
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||  ||||    ||||| ||||||| ||||||||||      
T  687 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaatgtataaacatagcagcataaacaagattatcatatgacaa-ttcaattaaaat 589  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
      ||||||||||||  ||||  ||  ||| ||||| |||||||||||||||| ||||| ||||||| ||||||||||||||| |||||||||||| ||||    
T  588 taatgtctcctcaaaagcttttatttcaagtgtacactaatcacaaactcaaccattttttgtaatctttattcaacccaacaatcaagtttcaaatgag 489  T
Q  219 tgt 221  Q
    |||    
T  488 tgt 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 8149 - 7948
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||  ||||     || | |||||| ||| || |||| |    
T  8149 catcaaactcccccacacttgaatctttgcttgtcttcaagcaaaaggcataaacacggtagcataaacaagatcattacatgacatttt-aactaaaac 8051  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
    ||||||||| |||| ||||| |||  ||||||||| |||||||||||||| |||||||||||||||  || ||||||||||| |||||||||||| ||||    
T  8050 acatgtctcttcaaaggctttaatttcaaatgtacactaatcacaaactcgagcatttcttgtaatcctttttcaacccaacaatcaagtttcaaatgag 7951  T
Q  219 tgt 221  Q
    |||    
T  7950 tgt 7948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 164403 - 164562
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcac-taacagttatatcaaatgacaatttcaattaaag 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||  |||| |  ||||| |||||||||| |||||||     
T  164403 catcaaactcccccacacttgaatctttgcttatcctcaagcaaaaggcataaacatggtagcacaaaacaatattatcatatgacaattt-aattaaaa 164501  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttct 178  Q
    ||||||||||||||||||||| |||   ||  | || ||||||||||||||||||||||||    
T  164502 cacatgtctcctcaagggcttcaatttaaagcgcacactaatcacaaactcaagcatttct 164562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 172316 - 172254
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  172316 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagcagca 172254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 162058 - 161995
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  162058 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagca 161995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 97726 - 97927
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||   || |    ||||| ||||||||| | |||||||    
T  97726 catcaaactcccccacacttgaatctttgcttgtcctaaagcaaaaggcataaacatggtagcataaaataacattatcatatgacaattac-attaaag 97824  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    |||||||||||||||  ||||  ||  ||||  |||| ||||||||||||||||||||||||| ||||  || ||||||||||| ||||||| | |||||    
T  97825 cacatgtctcctcaaatgcttttatttcaaagagtacactaatcacaaactcaagcatttcttataatcctttttcaacccaacaatcaagtcttaagtg 97924  T
Q  217 agt 219  Q
    |||    
T  97925 agt 97927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 1318 - 1115
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   || |    ||||| ||||||||| | ||||| |    
T  1318 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaataacattatcatatgacaattac-attaagg 1220  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    |||||||| |||||| |||||  ||  ||||  ||||  |||||||||||||||||||||||| ||||  || ||||||||||| ||||||| | |||||    
T  1219 cacatgtcccctcaaaggcttttatttcaaagagtacattaatcacaaactcaagcatttcttataatcctttttcaacccaacaatcaagtcttaagtg 1120  T
Q  217 agtgt 221  Q
    |||||    
T  1119 agtgt 1115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 10206 - 10325
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcacta-acagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| |  ||||| |||||||||| |||||||     
T  10206 catcaaactcccccaaacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaagacaatattatcatatgacaattt-aattaaaa 10304  T
Q  118 cacatgtctcctcaagggctt 138  Q
    |||||||||||||||||||||    
T  10305 cacatgtctcctcaagggctt 10325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 58628 - 58831
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||   || |    ||||| ||||||||| | |||||||    
T  58628 catcaaactcccccacacttgaatctttgcttgtcctcaagtaaaaggcataaacatggtagcataaaataacattatcatatgacaattac-attaaag 58726  T
Q  118 cacatgtctcctcaagggcttaaatcccaaa-tgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtg 216  Q
    |||||||||||||||  ||||  ||  ||||  |||| |||||||||||||||| |||||||| ||||  || ||||||||||| ||||||| | |||||    
T  58727 cacatgtctcctcaaatgcttttatttcaaagagtacactaatcacaaactcaaccatttcttataatcctttttcaacccaacaatcaagtcttaagtg 58826  T
Q  217 agtgt 221  Q
    |||||    
T  58827 agtgt 58831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 510 - 711
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||  ||     ||  || ||||||| |||||| ||| |    
T  510 catcaaactcccccatacttgaatctttgtttgtcctcaagcaaaaggcataaatatagtagcataaaacaagattacatatgacaa-ttcaatcaaaac 608  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
      || ||||||||| |||||  ||  |||  |||| |||||||||||||||| ||||||||||||  ||||||||||||||| ||||||||  |||||||    
T  609 ttatatctcctcaaaggcttttatttcaagcgtacactaatcacaaactcaaacatttcttgtaacctttattcaacccaacaatcaagttctaagtgag 708  T
Q  219 tgt 221  Q
    |||    
T  709 tgt 711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 13002 - 13202
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    ||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||  | ||    ||||| || | || |||||||||| |    
T  13002 catcaaactccgccacacttgaatctttgcttgtcctcaagtaagaggcataaacatagtagcataaccaagattatcatataataa-ttcaattaaaac 13100  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgag 218  Q
      |||||| ||||| |||||  ||  ||   |||| |||||  || |||||||||||||||||||| |||||| |||||||  |||||||||||||||||    
T  13101 ttatgtcttctcaaaggcttttatttcatgcgtacactaataccatactcaagcatttcttgtaatctttattaaacccaagaatcaagtttcaagtgag 13200  T
Q  219 tg 220  Q
    ||    
T  13201 tg 13202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 8869 - 8750
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca-ctaacagttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||    ||||| ||||||| || ||| ||||    
T  8869 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaacaacattatcatatgacaa-ttaaatcaaag 8771  T
Q  118 cacatgtctcctcaagggctt 138  Q
    ||||||||||||||| |||||    
T  8770 cacatgtctcctcaaaggctt 8750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 12609 - 12450
Alignment:
Q  21 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcact-aacag--ttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||  ||||||   ||||||| |||||| |||     
T  12609 tcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacatagtagcaataaacaggattatat---atgacaa-ttcaatcaaaa 12514  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgt 181  Q
      ||||||||||||| | |||  ||  |||   ||| |||||||||||||||||||||||||||    
T  12513 ttcatgtctcctcaaagacttttatttcaagcatacactaatcacaaactcaagcatttcttgt 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 232789 - 232948
Alignment:
Q  21 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcact-aacag--ttatatcaaatgacaatttcaattaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||  ||||||   ||||||| |||||| |||     
T  232789 tcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacatagtagcaataaacaggattatat---atgacaa-ttcaatcaaaa 232884  T
Q  118 cacatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgt 181  Q
      ||||||||||||| | |||  ||  |||   ||| |||||||||||||||||||||||||||    
T  232885 ttcatgtctcctcaaagacttttatttcaagcatacactaatcacaaactcaagcatttcttgt 232948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 35104 - 35303
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcactaacagttatatcaaatgacaatttcaattaaagc 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||  ||||        | ||||||| ||||| |||| |    
T  35104 catcaaactcccccacacttgaatctttccttgtcctcaagcaaaaggcataaacatggtagcataaaca--------agatgacaa-ttcaactaaaac 35194  T
Q  119 acatgtctcctcaagggcttaaatcccaaatgtacgctaatcacaaactcaagcatttcttgtaa------tttttattcaacccaacgatcaagtttca 212  Q
    |||||||||||  | ||||| |||  ||| |||||  ||||||||||||||||||||  | ||||      ||||| ||||||||||| || ||||||||    
T  35195 acatgtctcctttaaggctttaatttcaagtgtacagtaatcacaaactcaagcattcttggtaatcttttttttttttcaacccaacaatgaagtttca 35294  T

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Target: scaffold0096 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 38508 - 38572
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcac 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  38508 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaagcataaacatggtagcac 38572  T

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Target: scaffold0096; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 38631 - 38675
Alignment:
Q  156 taatcacaaactcaagcatttcttgtaatttttattcaacccaac 200  Q
    ||||||||||||||||||||||||||||   ||||||||||||||    
T  38631 taatcacaaactcaagcatttcttgtaaaccttattcaacccaac 38675  T

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Target: scaffold0512 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 5295 - 5232
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  5295 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagca 5232  T

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Target: scaffold0056 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 42300 - 42237
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  42300 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagca 42237  T

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Target: scaffold0035 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 50506 - 50569
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  50506 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagca 50569  T

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Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 88361 - 88403
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 62  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  88361 atcaaactcccctacacttgaaccattgcttgtcctcaagcaa 88403  T

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Target: scaffold0861 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 970 - 912
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatag 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  970 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatag 912  T

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Target: scaffold0566 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 2818 - 2762
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2818 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 2762  T

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Target: scaffold0375 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 12794 - 12743
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12794 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 12743  T

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Target: scaffold0258 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 22159 - 22218
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  22159 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagca 22218  T

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Target: scaffold0384 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 10776 - 10720
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  10776 catcaaactcccccacactttaatctttgcttgtcctcaagcaaaaggcatagacat 10720  T

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Target: scaffold0089 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 54849 - 54905
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  54849 catcaaactcccccacgcttgaatctttgcttgtcctcaagcaaaaggcatagacat 54905  T

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Target: scaffold1225 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 1902 - 1839
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||| ||||    
T  1902 catcaaactcccccacacttgaatctttgattgttctcaagcaaaaggcataaatatagcagca 1839  T

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Target: scaffold0116 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 37743 - 37806
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||    
T  37743 catcaaattcccccacacttgaatctttgcttgtcctcaagcaaaaggaatagacatagcagca 37806  T

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Target: scaffold0094 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 1248 - 1193
Alignment:
Q  20 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  1248 atcaaactcccccatacttgaatctttgcttgtccacaagcaaaaggcataaacat 1193  T

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Target: scaffold0031 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 22818 - 22756
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  22818 catcaaactcccccacacttgaatctttgcttgtcctcaagc-aaaggcatagacatagcagca 22756  T

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Target: scaffold1095 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 2926 - 2866
Alignment:
Q  161 acaaactcaagcatttcttgtaatttttattcaacccaacgatcaagtttcaagtgagtgt 221  Q
    |||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||    
T  2926 acaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgt 2866  T

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Target: scaffold0117 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 45228 - 45291
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 82  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||| ||||    
T  45228 catcaaactcccccacacctgaatctttgcttgttctcaagcaaaagacatagacatagcagca 45291  T

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Target: scaffold0088 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 37922 - 37868
Alignment:
Q  23 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatag 77  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  37922 aaactcccccacacttgaatcttttcttgccctcaagcaaaagccataaacatag 37868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 72572 - 72622
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcat 69  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  72572 catcaaactcccccacacttgaatctttacttttcctcaagcaaaaggcat 72622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 84762 - 84812
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcat 69  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  84762 catcaaactcccccacacttgaatctttacttttcctcaagcaaaaggcat 84812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 18263 - 18218
Alignment:
Q  19 catcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 64  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  18263 catcaaactcccccacacttgaatctttgcttgtcctcaagaaaaa 18218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 83174 - 83214
Alignment:
Q  35 acttgaatctttgcttgtcctcaagcaaaaggcataaacat 75  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  83174 acttgaatatttgcttgtcctcaagcaaaaggcataaacat 83214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 3291 - 3251
Alignment:
Q  22 caaactcccccacacttgaatctttgcttgtcctcaagcaa 62  Q
    |||||||||| ||||||||| | ||||||||||||||||||    
T  3291 caaactcccctacacttgaaccgttgcttgtcctcaagcaa 3251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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