View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9661A_low_231 (Length: 208)

Name: NF9661A_low_231
Description: NF9661A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9661A_low_231
NF9661A_low_231
[»] chr7 (26 HSPs)
chr7 (92-208)||(6097326-6097442)
chr7 (111-208)||(19434502-19434599)
chr7 (107-208)||(30924071-30924172)
chr7 (107-208)||(32805543-32805644)
chr7 (121-208)||(34556971-34557058)
chr7 (107-208)||(20402394-20402495)
chr7 (118-208)||(38128307-38128397)
chr7 (107-208)||(13106395-13106496)
chr7 (125-208)||(45842854-45842937)
chr7 (94-181)||(34333276-34333362)
chr7 (107-181)||(18485966-18486039)
chr7 (107-181)||(34606266-34606339)
chr7 (107-195)||(4628571-4628657)
chr7 (99-139)||(24438626-24438666)
chr7 (102-158)||(38128422-38128478)
chr7 (92-162)||(18470066-18470136)
chr7 (102-141)||(30703824-30703863)
chr7 (94-181)||(43594144-43594230)
chr7 (107-181)||(12218544-12218617)
chr7 (107-181)||(29993595-29993668)
chr7 (99-141)||(31320381-31320423)
chr7 (107-181)||(34546422-34546495)
chr7 (102-152)||(37720503-37720553)
chr7 (130-199)||(34435744-34435813)
chr7 (108-141)||(35791651-35791684)
chr7 (100-141)||(40234664-40234705)
[»] chr1 (29 HSPs)
chr1 (98-208)||(38595833-38595943)
chr1 (107-208)||(28725986-28726087)
chr1 (107-208)||(52702226-52702327)
chr1 (107-208)||(27457031-27457132)
chr1 (107-208)||(30664248-30664348)
chr1 (111-203)||(10679519-10679610)
chr1 (107-181)||(5694326-5694399)
chr1 (107-181)||(24178571-24178644)
chr1 (107-181)||(29657776-29657849)
chr1 (124-208)||(37350137-37350220)
chr1 (107-181)||(29683200-29683274)
chr1 (107-181)||(15227744-15227817)
chr1 (107-181)||(18043167-18043240)
chr1 (102-152)||(19940548-19940598)
chr1 (144-204)||(33644420-33644480)
chr1 (92-139)||(5694470-5694517)
chr1 (96-139)||(23822517-23822560)
chr1 (99-158)||(28725902-28725961)
chr1 (100-139)||(38595750-38595789)
chr1 (107-181)||(12072170-12072243)
chr1 (107-181)||(17333390-17333462)
chr1 (107-181)||(29210418-29210491)
chr1 (107-181)||(42770098-42770171)
chr1 (102-143)||(8981019-8981060)
chr1 (102-139)||(18043311-18043348)
chr1 (102-139)||(29210543-29210580)
chr1 (124-181)||(39912387-39912443)
chr1 (107-143)||(13961217-13961253)
chr1 (102-138)||(45449244-45449280)
[»] chr8 (28 HSPs)
chr8 (107-208)||(18955698-18955799)
chr8 (107-205)||(29566705-29566803)
chr8 (109-208)||(43714269-43714367)
chr8 (107-208)||(39751552-39751653)
chr8 (107-208)||(40267926-40268027)
chr8 (127-208)||(24261390-24261471)
chr8 (118-208)||(42655357-42655447)
chr8 (123-205)||(37479588-37479670)
chr8 (134-208)||(39206217-39206291)
chr8 (141-208)||(2270564-2270630)
chr8 (148-208)||(2490238-2490297)
chr8 (126-205)||(4811581-4811660)
chr8 (107-157)||(2490320-2490370)
chr8 (107-181)||(13643017-13643090)
chr8 (107-181)||(13743442-13743515)
chr8 (107-181)||(34228687-34228760)
chr8 (122-191)||(33899108-33899177)
chr8 (107-181)||(4537852-4537925)
chr8 (107-181)||(20831661-20831734)
chr8 (107-181)||(27988607-27988680)
chr8 (107-181)||(28045909-28045982)
chr8 (107-181)||(30675680-30675753)
chr8 (94-158)||(2490149-2490213)
chr8 (98-142)||(16394207-16394251)
chr8 (94-181)||(33357237-33357323)
chr8 (107-181)||(168471-168544)
chr8 (101-139)||(34228831-34228869)
chr8 (107-180)||(12652635-12652707)
[»] chr6 (23 HSPs)
chr6 (107-208)||(34706725-34706826)
chr6 (107-208)||(1127820-1127921)
chr6 (107-208)||(34712206-34712307)
chr6 (133-208)||(31379447-31379522)
chr6 (118-203)||(22021647-22021732)
chr6 (107-181)||(32929616-32929689)
chr6 (94-181)||(23402130-23402216)
chr6 (107-181)||(392101-392174)
chr6 (102-160)||(4215823-4215881)
chr6 (107-181)||(20897953-20898026)
chr6 (93-149)||(6793345-6793401)
chr6 (107-195)||(7851254-7851340)
chr6 (107-195)||(27433497-27433583)
chr6 (102-158)||(34706851-34706907)
chr6 (92-139)||(392245-392292)
chr6 (107-162)||(2350657-2350711)
chr6 (111-198)||(3246178-3246264)
chr6 (107-181)||(3515771-3515844)
chr6 (104-158)||(34712127-34712181)
chr6 (133-202)||(252407-252476)
chr6 (99-160)||(12145114-12145175)
chr6 (102-139)||(32929508-32929545)
chr6 (102-146)||(18276612-18276656)
[»] chr4 (30 HSPs)
chr4 (107-208)||(34151126-34151226)
chr4 (107-208)||(16572568-16572669)
chr4 (107-208)||(22225826-22225927)
chr4 (107-208)||(292119-292220)
chr4 (118-208)||(28119987-28120077)
chr4 (107-208)||(10110080-10110183)
chr4 (107-208)||(11893482-11893583)
chr4 (107-208)||(55594136-55594236)
chr4 (142-208)||(6493780-6493846)
chr4 (107-208)||(37402839-37402934)
chr4 (107-181)||(32217050-32217123)
chr4 (123-208)||(8749880-8749965)
chr4 (92-142)||(5518876-5518926)
chr4 (107-181)||(54897313-54897386)
chr4 (94-139)||(16536197-16536242)
chr4 (107-195)||(18067974-18068060)
chr4 (107-195)||(43202478-43202564)
chr4 (126-181)||(9964744-9964799)
chr4 (107-162)||(15186248-15186302)
chr4 (103-158)||(16572488-16572543)
chr4 (107-181)||(789638-789711)
chr4 (107-181)||(4268930-4269003)
chr4 (102-160)||(16820980-16821038)
chr4 (111-181)||(32202588-32202657)
chr4 (102-152)||(37402759-37402809)
chr4 (107-181)||(43944512-43944585)
chr4 (107-181)||(47231980-47232053)
chr4 (101-150)||(19328901-19328950)
chr4 (99-139)||(10426066-10426106)
chr4 (102-158)||(28119906-28119962)
[»] chr5 (20 HSPs)
chr5 (107-208)||(21944941-21945042)
chr5 (107-201)||(40608623-40608717)
chr5 (111-208)||(14214130-14214227)
chr5 (107-208)||(16972181-16972282)
chr5 (123-208)||(31467740-31467825)
chr5 (123-205)||(39234851-39234933)
chr5 (130-208)||(1383355-1383433)
chr5 (107-207)||(32188072-32188171)
chr5 (130-208)||(30889511-30889589)
chr5 (135-208)||(14349592-14349665)
chr5 (107-181)||(10054460-10054533)
chr5 (107-181)||(10069974-10070047)
chr5 (126-202)||(6042135-6042210)
chr5 (107-181)||(13661813-13661886)
chr5 (107-162)||(11958094-11958148)
chr5 (107-162)||(35132527-35132581)
chr5 (107-181)||(35504348-35504421)
chr5 (108-141)||(1919620-1919653)
chr5 (102-139)||(34650833-34650870)
chr5 (98-158)||(31467850-31467910)
[»] chr2 (32 HSPs)
chr2 (107-208)||(15135801-15135901)
chr2 (107-208)||(29771421-29771521)
chr2 (107-208)||(31782646-31782747)
chr2 (107-208)||(44854421-44854521)
chr2 (110-208)||(5282334-5282432)
chr2 (107-208)||(26269990-26270089)
chr2 (118-208)||(28178417-28178507)
chr2 (107-193)||(45261908-45261998)
chr2 (47-101)||(43104477-43104531)
chr2 (107-182)||(44854315-44854388)
chr2 (121-208)||(28012035-28012122)
chr2 (118-203)||(44331755-44331840)
chr2 (107-181)||(561626-561699)
chr2 (107-181)||(20552936-20553009)
chr2 (107-181)||(26891771-26891844)
chr2 (107-162)||(44587907-44587961)
chr2 (102-160)||(27856396-27856454)
chr2 (107-195)||(16807318-16807406)
chr2 (107-195)||(16846599-16846687)
chr2 (96-139)||(20553080-20553123)
chr2 (107-162)||(30486215-30486269)
chr2 (95-158)||(31782558-31782621)
chr2 (107-142)||(32361015-32361050)
chr2 (107-181)||(4381800-4381873)
chr2 (107-181)||(22887755-22887828)
chr2 (101-139)||(30486359-30486397)
chr2 (107-161)||(31438651-31438704)
chr2 (111-181)||(32860111-32860180)
chr2 (118-155)||(22068452-22068489)
chr2 (134-195)||(30834456-30834517)
chr2 (107-140)||(35851917-35851950)
chr2 (95-131)||(26270141-26270177)
[»] chr3 (26 HSPs)
chr3 (110-208)||(53163768-53163869)
chr3 (134-208)||(51665796-51665870)
chr3 (130-202)||(26966523-26966595)
chr3 (111-202)||(27994387-27994477)
chr3 (107-181)||(272225-272298)
chr3 (107-181)||(48725276-48725349)
chr3 (107-181)||(49893336-49893409)
chr3 (97-181)||(39074414-39074497)
chr3 (135-202)||(25743842-25743909)
chr3 (92-139)||(43787020-43787067)
chr3 (121-195)||(17752703-17752777)
chr3 (121-195)||(19054023-19054097)
chr3 (107-181)||(41304010-41304083)
chr3 (107-161)||(46352639-46352692)
chr3 (107-181)||(52520686-52520759)
chr3 (135-195)||(40614462-40614522)
chr3 (107-162)||(4168188-4168242)
chr3 (100-139)||(6842768-6842807)
chr3 (154-208)||(31436313-31436367)
chr3 (108-141)||(23516588-23516621)
chr3 (102-139)||(52520830-52520867)
chr3 (125-181)||(2391630-2391685)
chr3 (125-181)||(2393391-2393446)
chr3 (130-202)||(13898979-13899051)
chr3 (107-187)||(23925285-23925364)
chr3 (102-158)||(36545128-36545184)
[»] scaffold0001 (1 HSPs)
scaffold0001 (134-208)||(509070-509144)
[»] scaffold0264 (1 HSPs)
scaffold0264 (107-181)||(22966-23039)
[»] scaffold0003 (1 HSPs)
scaffold0003 (107-195)||(53780-53866)
[»] scaffold0021 (1 HSPs)
scaffold0021 (107-181)||(116209-116282)
[»] scaffold0188 (1 HSPs)
scaffold0188 (107-152)||(6246-6291)
[»] scaffold0045 (1 HSPs)
scaffold0045 (94-162)||(50540-50607)
[»] scaffold0019 (1 HSPs)
scaffold0019 (134-202)||(66430-66498)
[»] scaffold0014 (1 HSPs)
scaffold0014 (107-143)||(68435-68471)


Alignment Details
Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 6097326 - 6097442
Alignment:
Q  92 aataaaatatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaat 191  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  6097326 aataaaataagggaaatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattatttaat 6097425  T
Q  192 taatccataaataagtc 208  Q
    |||||||||||||||||    
T  6097426 taatccataaataagtc 6097442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 19434502 - 19434599
Alignment:
Q  111 taaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  19434502 taaccggtgcctccggggcactgattaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtc 19434599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 30924172 - 30924071
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||    
T  30924172 atgctaaccggtgcccccggggcacgggttaaggataataaaaagggaaattatatgttaattagtgcattgaaaattgtttaattaattcataaataag 30924073  T
Q  207 tc 208  Q
    ||    
T  30924072 tc 30924071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 32805543 - 32805644
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  32805543 atgctaaccggtgttcccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattaaaaattgtttaattaatccataaataag 32805642  T
Q  207 tc 208  Q
    ||    
T  32805643 tc 32805644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 34557058 - 34556971
Alignment:
Q  121 ccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  34557058 ccccggggcattggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtc 34556971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 20402394 - 20402495
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| || ||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||    
T  20402394 atgctaaccggtgtccccgggacattggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattatttaattaatccataaataag 20402493  T
Q  207 tc 208  Q
    ||    
T  20402494 tc 20402495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 38128307 - 38128397
Alignment:
Q  118 tgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  38128307 tgcccccgggacaccggttaaggataataaaaaggaaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtc 38128397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 13106496 - 13106395
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaagga-taataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataa 205  Q
    |||||||||| ||||| |||| |||||||||| || ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||    
T  13106496 atgctaaccggtgccctcggg-cactggttaaagaataataaaaagggaaattatttgttaattattgcattgaaaattgtttaattaatccataaataa 13106398  T
Q  206 gtc 208  Q
    |||    
T  13106397 gtc 13106395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 45842937 - 45842854
Alignment:
Q  125 ggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    ||||||||||||| |||||||||||| | ||||||||| |||||||||||||| |||| | |||||||||| ||||||||||||    
T  45842937 ggggcactggttagggataataaaaaagaaaattatatgttaattattgcattaaaaattatttaattaattcataaataagtc 45842854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 34333276 - 34333362
Alignment:
Q  94 taaaatatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    ||||||| |||  |||||||||| ||||||||||||||||||||||| | || |||| |||||||||||  |||||| ||||||||||    
T  34333276 taaaataagggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtaattaatgcattgaaa 34333362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 18485966 - 18486039
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||||||||||||||||||||||||| | |||| |||||||||||  |||||| || |||||||    
T  18485966 atgctaaccggtgcccccggggcactggttaaggatattgaaaa-ggaaattatatagtaattaatgtattgaaa 18486039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 34606266 - 34606339
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||| | |||| |||||||||||||||||||| || |||| |||||||||||  |||||| ||||||||||    
T  34606266 atgctaactggtgcctccggggcactggttaaggat-atgaaaaaggaaattatatagtaattaatgcattgaaa 34606339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 4628571 - 4628657
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    ||||||||||||||||| ||||||| |||||||||| || |||| |||||||||||  || ||| | ||||| ||| ||||||||||||    
T  4628571 atgctaaccgatgcccctggggcaccggttaaggat-atgaaaaaggaaattatatagtagttaatacattg-aaattgtttaattaat 4628657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 24438666 - 24438626
Alignment:
Q  99 tatgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  24438666 tatgggtcctgctaaccggtgcccccggggcactggttaag 24438626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 38128478 - 38128422
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaatt 158  Q
    ||||||||||||||| |||| ||||||||||||||||| |||  ||||| |||||||    
T  38128478 gggtcatgctaaccggtgcctccggggcactggttaagcatacaaaaaaaggaaatt 38128422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 18470136 - 18470066
Alignment:
Q  92 aataaaatatgggtcatgctaaccgatgccccc-ggggcactggttaaggataataaaaagggaaattatat 162  Q
    |||||||||||||  |||||||||| ||||||| ||||||| ||||||| ||| |||||| |||||||||||    
T  18470136 aataaaatatgggaaatgctaaccggtgcccccgggggcaccggttaagcatactaaaaa-ggaaattatat 18470066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 30703863 - 30703824
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaagga 141  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  30703863 gggtcatgttaaccaatgcccccggggcactggttaagga 30703824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 43594230 - 43594144
Alignment:
Q  94 taaaatatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||| ||||||  |||||||||| || ||||||  |||||||||||||| ||||||| |||||||||||  || ||| ||||||||||    
T  43594230 taaagtatgggaaatgctaaccggtgtccccggaacactggttaaggat-ataaaaaaggaaattatataatagttaatgcattgaaa 43594144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 12218617 - 12218544
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||| |||| || || |||| |||||||||||  || ||| ||||||||||    
T  12218617 atgctaaccggtgcccccggggcactggataagtat-atgaaaaaggaaattatatagtagttaatgcattgaaa 12218544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 29993668 - 29993595
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||| | |||||||||||||| |||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  29993668 atgctaacgggtgcccccggggcaccggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaaa 29993595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 31320423 - 31320381
Alignment:
Q  99 tatgggtcatgctaaccgatgcccccggggcactggttaagga 141  Q
    |||||||  ||||||||| ||||||||||||||||||||||||    
T  31320423 tatgggtgttgctaaccggtgcccccggggcactggttaagga 31320381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 34546495 - 34546422
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    ||||||||||||||||||| || || |||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  34546495 atgctaaccgatgcccccgaggtaccggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaaa 34546422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 37720503 - 37720553
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagg 152  Q
    ||||| || |||||||||||||| |||||||||||||||| | ||||||||    
T  37720503 gggtcttgttaaccgatgcccccagggcactggttaaggaaactaaaaagg 37720553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 34435813 - 34435744
Alignment:
Q  130 actggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccat 199  Q
    ||||||| |||||| |||||| |||||||||||  || |||||||||| |||| ||| |||| |||||||    
T  34435813 actggttcaggatactaaaaaaggaaattatataatagttattgcattaaaaattgtgtaatcaatccat 34435744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 35791684 - 35791651
Alignment:
Q  108 tgctaaccgatgcccccggggcactggttaagga 141  Q
    ||||||||| ||||||||||||||||||||||||    
T  35791684 tgctaaccggtgcccccggggcactggttaagga 35791651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 40234705 - 40234664
Alignment:
Q  100 atgggtcatgctaaccgatgcccccggggcactggttaagga 141  Q
    |||||||||| |||||| ||| ||||||||||||||||||||    
T  40234705 atgggtcatgttaaccggtgctcccggggcactggttaagga 40234664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 98 - 208
Target Start/End: Complemental strand, 38595943 - 38595833
Alignment:
Q  98 atatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatcc 197  Q
    |||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  38595943 atatgggaaatgctaaccggtgcccccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcc 38595844  T
Q  198 ataaataagtc 208  Q
    |||||||||||    
T  38595843 ataaataagtc 38595833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 28726087 - 28725986
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  28726087 atgctaaccggtgcccccggggcactggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataag 28725988  T
Q  207 tc 208  Q
    ||    
T  28725987 tc 28725986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 52702327 - 52702226
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  52702327 atgctaaccggtgctcccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataag 52702228  T
Q  207 tc 208  Q
    ||    
T  52702227 tc 52702226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 27457132 - 27457031
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    ||||||| || |||||||||||||  |||||| |||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  27457132 atgctaatcggtgcccccggggcaagggttaaagataataaaaagtgaaattatatgttaattagtgcattgaaaattgtttaattaatccataaataag 27457033  T
Q  207 tc 208  Q
    ||    
T  27457032 tc 27457031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 30664348 - 30664248
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| |||| |||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  30664348 atgctaaccg-tgcctccggggcattggttaaggataataaaaaagaaaattatatgttaattattgcattgaaaattgtttaattaatctataaataag 30664250  T
Q  207 tc 208  Q
    ||    
T  30664249 tc 30664248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 10679519 - 10679610
Alignment:
Q  111 taaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaat 203  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  10679519 taaccggtgctcccggggcactggtta-ggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaat 10679610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 5694326 - 5694399
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||| |||||||||||||||||||| |||||||||||||||||||  || ||| ||||||||||    
T  5694326 atgctaaccggtgcctccggggcactggttaaggat-ataaaaagggaaattatatagtagttaatgcattgaaa 5694399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 24178644 - 24178571
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  24178644 atgctaaccgatgcccccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattgaaa 24178571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 29657776 - 29657849
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||  || ||| ||||||||||    
T  29657776 atgctaaccggtgcccccggggcactggttaaggat-ataaaaaaggaaattatatagtagttaatgcattgaaa 29657849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 37350137 - 37350220
Alignment:
Q  124 cggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||||| ||||||||| ||||||   |||||||||  ||||| |||||||||||| ||| |||||||||||||||||||||    
T  37350137 cggggcactgattaaggatattaaaaaat-aaattatatggtaattgttgcattgaaaattgtgtaattaatccataaataagtc 37350220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 29683200 - 29683274
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||| ||||  ||||| |||||||||||  || ||| ||||||||||    
T  29683200 atgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagttaatgcattgaaa 29683274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 15227744 - 15227817
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| | |||| |||||||||||||||||| || |||| |||||||||||  |||||| ||||||||||    
T  15227744 atgctaaccggtaccccgggggcactggttaaggat-atgaaaaaggaaattatatagtaattaatgcattgaaa 15227817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 18043167 - 18043240
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||| |||||||||||||||||| | ||||||| |||||||||||  || ||| ||||||||||    
T  18043167 atgctaaccggtgcctccggggcactggttaagggt-ataaaaaaggaaattatatagtagttaatgcattgaaa 18043240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 19940548 - 19940598
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagg 152  Q
    |||||||| |||||| |||||||||||||||||||||||| | ||||||||    
T  19940548 gggtcatgttaaccggtgcccccggggcactggttaaggaaactaaaaagg 19940598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 33644480 - 33644420
Alignment:
Q  144 ataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaata 204  Q
    ||||||| | |||||||||  |||||||||||||||||| ||| |||||||| ||||||||    
T  33644480 ataaaaaagaaaattatataataattattgcattgaaaattgtgtaattaattcataaata 33644420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 5694517 - 5694470
Alignment:
Q  92 aataaaatatgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    ||||||||| ||||| ||||||||| ||||||||| ||||||||||||    
T  5694517 aataaaataagggtcctgctaaccggtgcccccggagcactggttaag 5694470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 23822517 - 23822560
Alignment:
Q  96 aaatatgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||    
T  23822517 aaatttgggtcatgctaaccggtgcccccggggcattggttaag 23822560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 28725902 - 28725961
Alignment:
Q  99 tatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaatt 158  Q
    |||||||| ||||||||| || ||||||||||||||||||| |||  ||||| |||||||    
T  28725902 tatgggtcttgctaaccggtgtccccggggcactggttaagcatacgaaaaaaggaaatt 28725961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 139
Target Start/End: Original strand, 38595750 - 38595789
Alignment:
Q  100 atgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  38595750 atgggtcatgctaaccggtgcctccggggcactggttaag 38595789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 12072243 - 12072170
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||||||||||||| |||||||||| || |||| ||||||||| |  || ||| ||||||||||    
T  12072243 atgctaaccggtgcccccggggcaccggttaaggat-atgaaaaaggaaattatgtagtagttaatgcattgaaa 12072170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 17333462 - 17333390
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||||||||| |||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  17333462 atgctaaccggtgcccccggg-cactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaaa 17333390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 29210418 - 29210491
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||| |||||||||||||||||| | || |||| |||||||||||  || ||| ||||||||||    
T  29210418 atgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 29210491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 42770171 - 42770098
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||| | | || |||| |||||||||||  || ||| ||||||||||    
T  42770171 atgctaaccggtgcccccggggcactggttaatggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 42770098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 8981019 - 8981060
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggata 143  Q
    |||||||||||||||||||  |||||| ||||||||||||||    
T  8981019 gggtcatgctaaccgatgcttccggggtactggttaaggata 8981060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 18043348 - 18043311
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  18043348 gggtcctgctaaccggtgcccccggggcactggttaag 18043311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 29210580 - 29210543
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  29210580 gggtcctgctaaccggtgcccccggggcactggttaag 29210543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 39912443 - 39912387
Alignment:
Q  124 cggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||| ||||||||||||||||||  || ||| ||||||||||    
T  39912443 cggggcactgattaaggata-taaaaagggaaattatatactagttaatgcattgaaa 39912387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 13961217 - 13961253
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggata 143  Q
    |||||||||| |||||||||||||| |||||||||||    
T  13961217 atgctaaccggtgcccccggggcacgggttaaggata 13961253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 45449244 - 45449280
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaa 138  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  45449244 gggtcctgctaaccgatgcccctggggcactggttaa 45449280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 18955698 - 18955799
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  18955698 atgctaaccgatgcccccgtggcactggttaatgataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataag 18955797  T
Q  207 tc 208  Q
    ||    
T  18955798 tc 18955799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 29566705 - 29566803
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataa 205  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  29566705 atgctaaccggtgcccccggggcacgggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattatttaattaatccataaataa 29566803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 43714367 - 43714269
Alignment:
Q  109 gctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  43714367 gctaaccggtgcccccggggcactggtta-ggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtc 43714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 39751653 - 39751552
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||| ||||||||||||| |||||||||    
T  39751653 atgctaaccggtgcccccggggcactggttaaggataataaaaaggaaaattatatattatttattgcattaaaaattgtttaattaatctataaataag 39751554  T
Q  207 tc 208  Q
    ||    
T  39751553 tc 39751552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 40267926 - 40268027
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    ||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||||    
T  40267926 atgctaaccaatgtccccggagcactggttaaggataataaaaagggaaattataggttaattattgcattgaaaattgtttaattaatctataaataag 40268025  T
Q  207 tc 208  Q
    ||    
T  40268026 tc 40268027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 24261390 - 24261471
Alignment:
Q  127 ggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  24261390 ggcactggttaaggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaacccataaataagtc 24261471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 42655447 - 42655357
Alignment:
Q  118 tgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||| |||| ||||| |||||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  42655447 tgcctccggagcacttgttaaggataatgaaaaggtaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtc 42655357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 37479588 - 37479670
Alignment:
Q  123 ccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataa 205  Q
    ||||| ||||| |||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||    
T  37479588 ccgggacactgattaaggataataaaaaaggaaattatatgttaattattgccttgaaaattgtttaattaatctataaataa 37479670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 134 - 208
Target Start/End: Original strand, 39206217 - 39206291
Alignment:
Q  134 gttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||| | |||||||||| ||||||||||||    
T  39206217 gttaaggataataaaaagggaaattatatgttaattattgtattgaaaattatttaattaattcataaataagtc 39206291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 2270564 - 2270630
Alignment:
Q  141 ataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    ||||||||||||||| |||||| |||||||||| |||||||| |||||||||||| ||||||||||||    
T  2270564 ataataaaaagggaa-ttatatgttaattattgtattgaaaattgtttaattaatgcataaataagtc 2270630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 2490297 - 2490238
Alignment:
Q  148 aaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||||| ||||||||||||    
T  2490297 aaagggaaat-atatattaattattgcattgaaaattgtttaattaattcataaataagtc 2490238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 4811581 - 4811660
Alignment:
Q  126 gggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataa 205  Q
    |||||| ||||||| ||| |||||| | |||||||||  |||||||||||||||||| ||| |||||||| |||||||||    
T  4811581 gggcaccggttaagaatactaaaaaagaaaattatatagtaattattgcattgaaaattgtataattaattcataaataa 4811660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 2490370 - 2490320
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaat 157  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  2490370 atgctaaccggtgcctccggggcacaggttaaggataataaaaagggaaat 2490320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 13643017 - 13643090
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||  || ||| ||||||||||    
T  13643017 atgctaaccggtgcccccggggcactggttaaggatacgaaaaa-ggaaattatatagtagttaatgcattgaaa 13643090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 13743442 - 13743515
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||  || ||| ||||||||||    
T  13743442 atgctaaccggtgcccccggggcactggttaaggatacgaaaaa-ggaaattatatagtagttaatgcattgaaa 13743515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 34228687 - 34228760
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||||| |||||||||||||||||| || |||| |||||||||||  |||||| ||||||||||    
T  34228687 atgctaaccggtgccccgggggcactggttaaggat-atgaaaaaggaaattatatagtaattaatgcattgaaa 34228760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 33899177 - 33899108
Alignment:
Q  122 cccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaat 191  Q
    |||||||||||||||||| || ||||||| |||||||||||  ||||||||| |||||||| ||| ||||    
T  33899177 cccggggcactggttaagaatgataaaaaaggaaattatataataattattgaattgaaaattgtgtaat 33899108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 4537925 - 4537852
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||| |||||||||||||||||||| ||||||  |||||||||||  || ||| ||||||||||    
T  4537925 atgctaaccggtgcctccggggcactggttaaggat-ataaaataggaaattatatagtagttaatgcattgaaa 4537852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 20831734 - 20831661
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||||||||| |||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  20831734 atgctaaccggtgcccccgggacactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaaa 20831661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 27988680 - 27988607
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||| |||||||||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  27988680 atgctaaccggtgcctccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattgaaa 27988607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 28045982 - 28045909
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||| |||||||||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  28045982 atgctaaccggtgcctccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattgaaa 28045909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 30675753 - 30675680
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||| | || |||| |||||||||||  || ||| ||||||||||    
T  30675753 atgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 30675680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 2490149 - 2490213
Alignment:
Q  94 taaaatatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaatt 158  Q
    ||||||| ||||||||||||||| |||||||| ||||| ||||||| |||  ||||| |||||||    
T  2490149 taaaataagggtcatgctaaccggtgcccccgaggcacgggttaagcatacaaaaaaaggaaatt 2490213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 16394251 - 16394207
Alignment:
Q  98 atatgggtcatgctaaccgatgcccccggggcactggttaaggat 142  Q
    |||||||  |||||||||| |||||||||||||||||||||||||    
T  16394251 atatgggaaatgctaaccggtgcccccggggcactggttaaggat 16394207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 33357323 - 33357237
Alignment:
Q  94 taaaatatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    ||||||| |||  |||||||| | ||||||||| ||||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  33357323 taaaataagggaaatgctaactggtgcccccggagcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaaa 33357237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 168471 - 168544
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||| |||||||||||||||||| | || |||| |||||||||||  || ||| ||||||||||    
T  168471 atgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 168544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 34228869 - 34228831
Alignment:
Q  101 tgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  34228869 tgggtcctgctaaccggtgcccccggggcactggttaag 34228831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 12652635 - 12652707
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaa 180  Q
    |||||||||| |||||| || ||||||||||||||| || |||| |||||||||||  || ||| |||||||||    
T  12652635 atgctaaccggtgcccctggagcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaa 12652707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 6e-39; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 34706725 - 34706826
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  34706725 atgctaaccggtgccccgggggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataag 34706824  T
Q  207 tc 208  Q
    ||    
T  34706825 tc 34706826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 1127820 - 1127921
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||  ||| || ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||    
T  1127820 atgctaaccagtgctccgggggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatttataaataag 1127919  T
Q  207 tc 208  Q
    ||    
T  1127920 tc 1127921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 34712307 - 34712206
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||   | ||||||||||| |||||||||    
T  34712307 atgctaaccggtgcctccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattaaattttttttaattaatctataaataag 34712208  T
Q  207 tc 208  Q
    ||    
T  34712207 tc 34712206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 31379522 - 31379447
Alignment:
Q  133 ggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||    
T  31379522 ggttaaggataataaaaagggaaattatatattaattattgcatttaaaattgtttaattaatccataaataagtc 31379447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 22021647 - 22021732
Alignment:
Q  118 tgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaat 203  Q
    ||||||||||||||| ||||||| || ||||||  ||| ||||||  |||||||||||||||||  ||| ||||||||||||||||    
T  22021647 tgcccccggggcactagttaaggttactaaaaaaagaatttatatagtaattattgcattgaaacttgtgtaattaatccataaat 22021732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 32929689 - 32929616
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||| ||||||||| | || |||| ||||||||||| ||||||| ||||||||||    
T  32929689 atgctaaccggtgcccccggggcaatggttaagggt-atgaaaaaggaaattatatattaattaatgcattgaaa 32929616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 23402130 - 23402216
Alignment:
Q  94 taaaatatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    ||||||| |||  |||||||| | |||| |||||||||||||||||||| || |||| |||||||||||  |||||| ||||||||||    
T  23402130 taaaataagggaaatgctaactggtgcctccggggcactggttaaggat-atgaaaaaggaaattatatagtaattaatgcattgaaa 23402216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 392101 - 392174
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||| | || |||| |||||||||||  || ||| ||||||||||    
T  392101 atgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 392174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 4215881 - 4215823
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattat 160  Q
    ||||| |||||||||||||||||||||||||||||||| |||  | ||| |||||||||    
T  4215881 gggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattat 4215823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 20897953 - 20898026
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||| ||||||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  20897953 atgctaaccggtgcccccagggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaaa 20898026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 6793345 - 6793401
Alignment:
Q  93 ataaaatatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaa 149  Q
    |||||||| |||| ||| ||||||||||| |||||||||||||||| |||| |||||    
T  6793345 ataaaataagggttatgataaccgatgcctccggggcactggttaacgatactaaaa 6793401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 7851340 - 7851254
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    |||||||||| ||||||| ||||||||||||||||| || |||| | |||||||||  |||||| |||||| |||| ||| ||||||||    
T  7851340 atgctaaccggtgcccccagggcactggttaaggat-atgaaaaagaaaattatatagtaattaatgcatt-aaaattgtgtaattaat 7851254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 27433497 - 27433583
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    |||||||||| ||||||||||||||||||||||| | || |||| |||||||||||  || ||| |||||| |||| ||| ||||||||    
T  27433497 atgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcatt-aaaattgtgtaattaat 27433583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 34706907 - 34706851
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaatt 158  Q
    ||||| ||||||||| |||||||||||||||||||||| |||  ||||| |||||||    
T  34706907 gggtcttgctaaccggtgcccccggggcactggttaagcatacgaaaaaaggaaatt 34706851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 392292 - 392245
Alignment:
Q  92 aataaaatatgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    |||||| || ||||| ||||||||| ||||||||||||||||||||||    
T  392292 aataaattaagggtcctgctaaccggtgcccccggggcactggttaag 392245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 2350657 - 2350711
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatat 162  Q
    |||||||||| ||| ||||||||||||||||||||| || |||| |||||||||||    
T  2350657 atgctaaccggtgctcccggggcactggttaaggat-atgaaaaaggaaattatat 2350711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 3246264 - 3246178
Alignment:
Q  111 taaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatcca 198  Q
    |||||| |||||  || |||||| ||||||||| |||||||| ||||||||   ||||||||||||| |||| ||| |||||||||||    
T  3246264 taaccggtgcccttggagcactgattaaggatactaaaaagg-aaattatacagtaattattgcattaaaaattgtgtaattaatcca 3246178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 3515771 - 3515844
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||| ||||||||||||||| | || |||| |||||||||||  || ||| ||||||||||    
T  3515771 atgctaaccggtgcccccagggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 3515844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 34712127 - 34712181
Alignment:
Q  104 gtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaatt 158  Q
    ||||||||||||| ||||||||||||||| |||||| |||  ||||| |||||||    
T  34712127 gtcatgctaaccggtgcccccggggcactagttaagcatacaaaaaatggaaatt 34712181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 252476 - 252407
Alignment:
Q  133 ggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaa 202  Q
    ||||||||||| ||||||  |||||||||| ||| |||||| |||||||| ||| |||| ||| ||||||    
T  252476 ggttaaggatactaaaaatagaaattatatattagttattgtattgaaaattgtgtaatcaattcataaa 252407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 12145114 - 12145175
Alignment:
Q  99 tatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattat 160  Q
    |||||||| ||||||||| |||| |||| |||||||||||| ||| || ||| |||||||||    
T  12145114 tatgggtcctgctaaccggtgcctccggagcactggttaagcatactataaaaggaaattat 12145175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 32929508 - 32929545
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  32929508 gggtcctgctaaccggtgcccccggggcactggttaag 32929545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 18276612 - 18276656
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggataata 146  Q
    ||||| ||||||||| |||||| ||||||||||||||| ||||||    
T  18276612 gggtcctgctaaccggtgccccaggggcactggttaagcataata 18276656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 6e-39; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 34151126 - 34151226
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  34151126 atgctaaccgatgcccc-ggggcactggttaaggataataaaaaggaaaattatatgttaattattgcattgaaaattgtttaattaatccataaataag 34151224  T
Q  207 tc 208  Q
    ||    
T  34151225 tc 34151226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 16572669 - 16572568
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  16572669 atgctaaccggtgcctccgaggcactggttaaggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaatccataaataag 16572570  T
Q  207 tc 208  Q
    ||    
T  16572569 tc 16572568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 22225927 - 22225826
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  22225927 atgctaaccggtgcccccgggacactggttaaggataataaaaagggaaactatatgttaattattgcattaaaaattgtttaattaatccataaataag 22225828  T
Q  207 tc 208  Q
    ||    
T  22225827 tc 22225826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 292119 - 292220
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  292119 atgctaaccggtgccccgggggcaccggttaaggataataaaaagaaaaattatatgttaattattgcattgaaaattgtttaattaatccataaataag 292218  T
Q  207 tc 208  Q
    ||    
T  292219 tc 292220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 28120077 - 28119987
Alignment:
Q  118 tgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  28120077 tgccccgggggcaccggttaaggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtc 28119987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 10110183 - 10110080
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaa--tgtttaattaatccataaata 204  Q
    |||||||||| |||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||||    
T  10110183 atgctaaccggtgcctccgggacactgattaaggataataaaaagggaaattatatgttaattattgcattgaaaaaattgtttaattaatctataaata 10110084  T
Q  205 agtc 208  Q
    ||||    
T  10110083 agtc 10110080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 11893583 - 11893482
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||| | ||||||| |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| | ||||||||||| |||||||||    
T  11893583 atgctaacaggtgcccccagggcactgtttaaggataataaaaagggaaattatatgttaattattgaattgaaaattatttaattaatctataaataag 11893484  T
Q  207 tc 208  Q
    ||    
T  11893483 tc 11893482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 55594136 - 55594236
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| |||| | |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||| ||||    
T  55594136 atgctaaccggtgcctc-ggggcactggttaaggataataaaaaggaaaattatatgttaattattgcattaaaaattgtttaattaatccataagtaag 55594234  T
Q  207 tc 208  Q
    ||    
T  55594235 tc 55594236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 6493846 - 6493780
Alignment:
Q  142 taataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  6493846 taataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtc 6493780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 37402934 - 37402839
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| ||| |||||  ||||||||| |||||||||||||||||||||||| |||||||||      |||| |||||||||||||||||||||||    
T  37402934 atgctaaccggtgctcccgga-cactggttacggataataaaaagggaaattatatgttaattatta-----aaaattgtttaattaatccataaataag 37402841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 32217050 - 32217123
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||| | ||||||||||||||||||||||||| ||||||| |||||||||||  || ||| ||||||||||    
T  32217050 atgctaactggtgcccccggggcactggttaaggat-ataaaaaaggaaattatatagtagttaatgcattgaaa 32217123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 8749965 - 8749880
Alignment:
Q  123 ccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||||||| ||||| || |||||| | ||||| |||  |||||||| ||||||||| ||| ||||||||| |||||||||||    
T  8749965 ccggggcactggctaaggttactaaaaaagaaaattttataataattattacattgaaaattgtgtaattaatctataaataagtc 8749880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 5518876 - 5518926
Alignment:
Q  92 aataaaatatgggtcatgctaaccgatgcccccggggcactggttaaggat 142  Q
    ||||| ||||||||||||||||||  |||||||||||||| ||||||||||    
T  5518876 aataatatatgggtcatgctaaccagtgcccccggggcacaggttaaggat 5518926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 54897313 - 54897386
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||||| || | || |||||||||||  || ||| ||||||||||    
T  54897313 atgctaaccggtgcccccggggcactggttaaggat-atgagaaaggaaattatatagtagttaatgcattgaaa 54897386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 16536242 - 16536197
Alignment:
Q  94 taaaatatgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  16536242 taaaataagggtcctgctaaccggtgcccccggggcactggttaag 16536197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 18068060 - 18067974
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    |||||||||| ||||||||||||||||||||||| | || |||| |||||||||||  || ||| |||||| |||| ||| ||||||||    
T  18068060 atgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcatt-aaaattgtgtaattaat 18067974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 43202564 - 43202478
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    |||||||||| ||||||||||||||| ||||||| | || |||| |||||||||||  |||||| |||||| |||| ||| ||||||||    
T  43202564 atgctaaccggtgcccccggggcactagttaagggt-atgaaaaaggaaattatatagtaattaatgcatt-aaaattgtgtaattaat 43202478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 9964744 - 9964799
Alignment:
Q  126 gggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    ||||| |||||||||||  ||||||  |||||||||| ||||||||||||||||||    
T  9964744 gggcagtggttaaggatgttaaaaatagaaattatatattaattattgcattgaaa 9964799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 15186248 - 15186302
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatat 162  Q
    |||||||||| ||||||||||||||||||||||| | || |||| |||||||||||    
T  15186248 atgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatat 15186302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 16572488 - 16572543
Alignment:
Q  103 ggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaatt 158  Q
    |||||||||||||| |||||||||||||||| ||||| |||  ||||| |||||||    
T  16572488 ggtcatgctaaccggtgcccccggggcactgattaagtatacaaaaaaaggaaatt 16572543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 789711 - 789638
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||||||||||||| |||||||| | || |||| |||||||||||  || ||| ||||||||||    
T  789711 atgctaaccggtgcccccggggcacgggttaagggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 789638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 4269003 - 4268930
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||| | || |||| ||||| |||||  || ||| ||||||||||    
T  4269003 atgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaactatatagtagttaatgcattgaaa 4268930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 16821038 - 16820980
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattat 160  Q
    ||||| ||||||||| |||||||||||||||||||||| |||  | ||| |||||||||    
T  16821038 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaaggaaattat 16820980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 32202657 - 32202588
Alignment:
Q  111 taaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||| || ||||||||||| |||||||||| ||||||| |||||||||||  || ||| ||||||||||    
T  32202657 taaccggtgtccccggggcacgggttaaggat-ataaaaaaggaaattatatagtagttaatgcattgaaa 32202588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 37402759 - 37402809
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagg 152  Q
    ||||||||||||||| ||||| |||||||||||||||| |||  |||||||    
T  37402759 gggtcatgctaaccggtgccctcggggcactggttaagcatacaaaaaagg 37402809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 43944512 - 43944585
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||| |||||||||||||||||| | || |||| |||||||||||  || ||| ||||||||||    
T  43944512 atgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 43944585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 47232053 - 47231980
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||| |||||||||||||||  | |||| |||||||||||  || ||| ||||||||||    
T  47232053 atgctaaccggtgcccccggagcactggttaaggat-gtgaaaaaggaaattatataatagttaatgcattgaaa 47231980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 19328950 - 19328901
Alignment:
Q  101 tgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaa 150  Q
    ||||||||| |||||| |||||| ||||||||||||||||| | ||||||    
T  19328950 tgggtcatgttaaccggtgccccgggggcactggttaaggaaactaaaaa 19328901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 10426106 - 10426066
Alignment:
Q  99 tatgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    |||||||  ||||||||| ||||||||||||||||||||||    
T  10426106 tatgggtgctgctaaccggtgcccccggggcactggttaag 10426066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 28119906 - 28119962
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaatt 158  Q
    ||||||||||||||| || | ||||||||||||||||| |||  ||||| |||||||    
T  28119906 gggtcatgctaaccggtgtctccggggcactggttaagcatacaaaaaaaggaaatt 28119962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 21945042 - 21944941
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  21945042 atgctaaccggtgcctccggggcactggttaaggataataaaaaggaaaattatatattaattattgcattaaaaattgtttaattaatccataaataag 21944943  T
Q  207 tc 208  Q
    ||    
T  21944942 tc 21944941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 40608717 - 40608623
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataa 201  Q
    |||||||||| ||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  40608717 atgctaaccggtgctcccgggacactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 40608623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 14214227 - 14214130
Alignment:
Q  111 taaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||| ||| |||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  14214227 taaccggtgctcccgaggcacaggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtc 14214130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 16972181 - 16972282
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  ||||||||| |||||||||||||| |||| | |||||||||||||||||||||    
T  16972181 atgctaaccgatgcccccggagcactggttaaggataataaaaagaaaaattatatgttaattattgcattaaaaattatttaattaatccataaataag 16972280  T
Q  207 tc 208  Q
    ||    
T  16972281 tc 16972282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 31467740 - 31467825
Alignment:
Q  123 ccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  31467740 ccggggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtc 31467825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 39234851 - 39234933
Alignment:
Q  123 ccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataa 205  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  39234851 ccggggcacgggttaaggataataaaaagggaaattatatgttaattattgcattgacaattgtttaattaatccataaataa 39234933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 1383433 - 1383355
Alignment:
Q  130 actggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||    
T  1383433 actggttaaggataataagaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaaaaagtc 1383355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 32188171 - 32188072
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||| ||||||||||||  |||||||||    
T  32188171 atgctaaccgatgcctccgaggcactggttaag-ataataaaaagaaaaattatatgttaattattgcattgaaaattgtttaattaatttataaataag 32188073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 30889589 - 30889511
Alignment:
Q  130 actggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||| | ||||||||||| |||||||||||    
T  30889589 actggttaaggataataaaaagggaaattatatgttaattattgaattgaaaattatttaattaatctataaataagtc 30889511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 14349592 - 14349665
Alignment:
Q  135 ttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  14349592 ttaaggataataaaaagataaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtc 14349665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 10054533 - 10054460
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||| | || |||| |||||||||||  |||||| ||||||||||    
T  10054533 atgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatataataattaatgcattgaaa 10054460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 10069974 - 10070047
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  10069974 atgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaaa 10070047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 6042210 - 6042135
Alignment:
Q  126 gggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaa 202  Q
    ||||||||||||| |||| ||||||   |||||||||  |||||||||||||||||| ||| |||||||||||||||    
T  6042210 gggcactggttaaagatactaaaaaaa-aaattatatagtaattattgcattgaaaattgtgtaattaatccataaa 6042135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 13661813 - 13661886
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||| ||||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  13661813 atgctaaccggtgcccccggagcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaaa 13661886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 11958148 - 11958094
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatat 162  Q
    |||||||||| |||||||||||||| |||||| ||| ||||||| |||||||||||    
T  11958148 atgctaaccggtgcccccggggcacaggttaaagat-ataaaaaaggaaattatat 11958094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 35132527 - 35132581
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatat 162  Q
    |||||||||| |||||||||| |||||||||||||| || |||| |||||||||||    
T  35132527 atgctaaccggtgcccccgggacactggttaaggat-atgaaaaaggaaattatat 35132581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 35504421 - 35504348
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||||||||| |||||||||||| | || |||| |||||||||||  || ||| ||||||||||    
T  35504421 atgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 35504348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 1919653 - 1919620
Alignment:
Q  108 tgctaaccgatgcccccggggcactggttaagga 141  Q
    ||||||||| ||||||||||||||||||||||||    
T  1919653 tgctaaccggtgcccccggggcactggttaagga 1919620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 34650833 - 34650870
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  34650833 gggtcctgctaaccggtgcccccggggcactggttaag 34650870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 31467910 - 31467850
Alignment:
Q  98 atatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaatt 158  Q
    ||||||||| ||||||||| || ||| ||||||||||||||| |||  ||||| |||||||    
T  31467910 atatgggtcttgctaaccggtgtccctggggcactggttaagcatacaaaaaaaggaaatt 31467850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 4e-34; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 15135901 - 15135801
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    ||||||||| ||||| |||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  15135901 atgctaaccaatgcctccggggtactg-ttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataag 15135803  T
Q  207 tc 208  Q
    ||    
T  15135802 tc 15135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 29771421 - 29771521
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||  ||||||||||||||||||||    
T  29771421 atgctaaccgatgcccccggggcactggttaaggataataaaaaaggaaattatatgttaattattacattg-aaaattattaattaatccataaataag 29771519  T
Q  207 tc 208  Q
    ||    
T  29771520 tc 29771521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 31782747 - 31782646
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| || ||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  31782747 atgctaaccggtgtccccggggcacggattaaggataataaaaagagaaattatatattaattattgcattgaaaattgtttaattaatccataaataag 31782648  T
Q  207 tc 208  Q
    ||    
T  31782647 tc 31782646  T

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Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 44854521 - 44854421
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| | | ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  44854521 atgctaaccggtactcccggggcactggttaaggataataaaaagg-aaattatatgttaattattgcattgaaaattgtttaattaatccataaataag 44854423  T
Q  207 tc 208  Q
    ||    
T  44854422 tc 44854421  T

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Target: chr2; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 5282432 - 5282334
Alignment:
Q  110 ctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||| ||||||| ||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  5282432 ctaatcgatgcctccgggacactgattaaggataataaaaggggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtc 5282334  T

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Target: chr2; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 26269990 - 26270089
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    |||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  26269990 atgctaaccggtgcccccggg-cactggtta-ggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaatctataaataag 26270087  T

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Target: chr2; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 28178417 - 28178507
Alignment:
Q  118 tgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    ||||||| |||||| | |||||||||||||||||  ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||    
T  28178417 tgcccccagggcacggattaaggataataaaaagaaaaattatatattaattattacattgaaaattgtttaattaatccataaataagtc 28178507  T

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Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 45261908 - 45261998
Alignment:
Q  107 atgctaaccgatgcccccg-gggcactggttaaggataataaaaagggaa---attatatcttaattattgcattgaaaaatgtttaatta 193  Q
    |||||||||| |||||||  ||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||| ||||||||||    
T  45261908 atgctaaccggtgccccccagggcactggttaaggataataaaaagggaaattattatatgttaattattgcattgaaaattgtttaatta 45261998  T

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Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 43104477 - 43104531
Alignment:
Q  47 aggcatgccacgttcattagtcatcaacaatatatagaaacggtgaataaaatat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43104477 aggcatgccacgttcattagtcatcaacaatatatagaaacggtgagtaaaatat 43104531  T

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Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 44854315 - 44854388
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaa 182  Q
    |||||||||| |||||||||| | |||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  44854315 atgctaaccggtgcccccgggtc-ctggttaaggataataaaaagg-aaattatatattaattattgcattgaaaa 44854388  T

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Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 28012122 - 28012035
Alignment:
Q  121 ccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||  |||||||||||||| |||||||| |||||||||  ||||||||||||| |||| |||  |||||||| |||||||||||    
T  28012122 ccccgggatactggttaaggatattaaaaaggaaaattatatagtaattattgcattcaaaattgtggaattaatctataaataagtc 28012035  T

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Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 44331755 - 44331840
Alignment:
Q  118 tgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaat 203  Q
    ||||||||||||||| ||||||| || ||||||  ||| ||||||  |||||||||||||||||  ||| ||||||||||||||||    
T  44331755 tgcccccggggcactagttaaggttactaaaaaaagaatttatatagtaattattgcattgaaacttgtgtaattaatccataaat 44331840  T

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Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 561699 - 561626
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  561699 atgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaaa 561626  T

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Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 20552936 - 20553009
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||||| |||||||||||||||||| || |||| |||||||||||  |||||| ||||||||||    
T  20552936 atgctaaccggtgccccgggggcactggttaaggat-atgaaaaaggaaattatatagtaattaatgcattgaaa 20553009  T

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Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 26891844 - 26891771
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||||||||| ||||| ||||||||| |||||| ||||||||||| ||| ||| ||||||||||    
T  26891844 atgctaaccggtgcccccgggacactgattaaggata-taaaaaaggaaattatatattagttaatgcattgaaa 26891771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 44587907 - 44587961
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatat 162  Q
    |||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||    
T  44587907 atgctaaccggtgcccccggggcaccggttaaggat-ataaaaaaggaaattatat 44587961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 27856396 - 27856454
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattat 160  Q
    ||||| |||||||||||||||||||||||||||||||| |||  | ||| |||||||||    
T  27856396 gggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattat 27856454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 16807406 - 16807318
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    |||||||||| |||| ||| |||| |||||||||||  | |||| | |||||||||  || ||||||||||||||| ||| ||||||||    
T  16807406 atgctaaccggtgcctccgaggcattggttaaggatgtttaaaaagaaaattatatagtagttattgcattgaaaactgtgtaattaat 16807318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 16846687 - 16846599
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    |||||||||| |||| ||| |||| |||||||||||  | |||| | |||||||||  || ||||||||||||||| ||| ||||||||    
T  16846687 atgctaaccggtgcctccgaggcattggttaaggatgtttaaaaagaaaattatatagtagttattgcattgaaaactgtgtaattaat 16846599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 20553123 - 20553080
Alignment:
Q  96 aaatatgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||    
T  20553123 aaataagggtcctgctaaccggtgcccccggggcactggttaag 20553080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 30486215 - 30486269
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatat 162  Q
    |||||||| | ||||||||||||||||||||||||| || |||| |||||||||||    
T  30486215 atgctaactggtgcccccggggcactggttaaggat-atgaaaaaggaaattatat 30486269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 31782558 - 31782621
Alignment:
Q  95 aaaatatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaatt 158  Q
    |||| ||||||||||||||||| |||||||| ||||| ||||||| |||  ||||| |||||||    
T  31782558 aaaaaatgggtcatgctaaccggtgcccccgaggcacgggttaagcatacaaaaaaaggaaatt 31782621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 142
Target Start/End: Complemental strand, 32361050 - 32361015
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggat 142  Q
    |||||||||| |||||||||||||||||||||||||    
T  32361050 atgctaaccggtgcccccggggcactggttaaggat 32361015  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 4381800 - 4381873
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||| ||||||||||||| | || |||| |||||||||||  || ||| ||||||||||    
T  4381800 atgctaaccggtgcccccggtgcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 4381873  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 22887755 - 22887828
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    ||||||||||||||| |||||||| ||||||||||| || ||||  ||||||||||  || ||| ||||||||||    
T  22887755 atgctaaccgatgcctccggggcagtggttaaggat-atgaaaaaagaaattatatagtagttaatgcattgaaa 22887828  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 30486397 - 30486359
Alignment:
Q  101 tgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  30486397 tgggtcctgctaaccggtgcccccggggcactggttaag 30486359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 31438651 - 31438704
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattata 161  Q
    |||||||||| ||| ||||||||||||||||||||| || |||| ||||||||||    
T  31438651 atgctaaccggtgctcccggggcactggttaaggat-atgaaaaaggaaattata 31438704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 32860111 - 32860180
Alignment:
Q  111 taaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||| |||||| ||||||| |||||||||| ||||||| |||||||||||  || ||| ||||||||||    
T  32860111 taaccggtgccccgggggcacgggttaaggat-ataaaaaaggaaattatatagtatttaatgcattgaaa 32860180  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 155
Target Start/End: Complemental strand, 22068489 - 22068452
Alignment:
Q  118 tgcccccggggcactggttaaggataataaaaagggaa 155  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  22068489 tgcccccggggcactggttaaggatatgaaaaagggaa 22068452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 30834517 - 30834456
Alignment:
Q  134 gttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    |||||||||  |||||| |||||||||||  || ||||||||||||||| ||| ||||||||    
T  30834517 gttaaggatgctaaaaaaggaaattatataatagttattgcattgaaaactgtgtaattaat 30834456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 35851950 - 35851917
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaagg 140  Q
    |||||||||| |||||||||||||||||||||||    
T  35851950 atgctaaccggtgcccccggggcactggttaagg 35851917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 26270177 - 26270141
Alignment:
Q  95 aaaatatgggtcatgctaaccgatgcccccggggcac 131  Q
    |||||||||||||||||||||| |||| |||||||||    
T  26270177 aaaatatgggtcatgctaaccggtgcctccggggcac 26270141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 9e-26; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 110 - 208
Target Start/End: Original strand, 53163768 - 53163869
Alignment:
Q  110 ctaaccgatgcccccggggcactg---gttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataag 206  Q
    ||||||| ||||||| ||||||||   ||||||||||||||| ||||||||||||| ||||||| || |||||||| |||||||||||||||||||||||    
T  53163768 ctaaccggtgcccccagggcactgctggttaaggataataaatagggaaattatatgttaattactggattgaaaattgtttaattaatccataaataag 53163867  T
Q  207 tc 208  Q
    ||    
T  53163868 tc 53163869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 51665870 - 51665796
Alignment:
Q  134 gttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||    
T  51665870 gttaaggataataaaaagagaaattatatattaattattgcattgaaaattgtttaattaattcataaataagtc 51665796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 26966523 - 26966595
Alignment:
Q  130 actggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaa 202  Q
    |||| ||||||||| ||||||  ||||||||||  || ||||||||||||||| |||||||||||||||||||    
T  26966523 actgattaaggatactaaaaaaagaaattatatagtagttattgcattgaaaattgtttaattaatccataaa 26966595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 27994477 - 27994387
Alignment:
Q  111 taaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaa 202  Q
    ||||||||||||||||||||||||||||||||| ||||||  |||||| |||  |||||| || | |||||| | | |||||||||||||||    
T  27994477 taaccgatgcccccggggcactggttaaggatactaaaaa-agaaattttatagtaattaatgtagtgaaaattatgtaattaatccataaa 27994387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 272225 - 272298
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  272225 atgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaaa 272298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 48725276 - 48725349
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||||| |||||||||||||||||| || |||| |||||||||||  |||||| ||||||||||    
T  48725276 atgctaaccggtgccccgggggcactggttaaggat-atgaaaaaggaaattatatagtaattaatgcattgaaa 48725349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 49893336 - 49893409
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||||| || |||| |||||||||||  || ||| ||||||||||    
T  49893336 atgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattgaaa 49893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 39074414 - 39074497
Alignment:
Q  97 aatatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    ||||||||  |||||||||| ||||||||||||||||||||||| | || |||| |||||||||||  || ||| ||||||||||    
T  39074414 aatatgggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 39074497  T

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Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 25743842 - 25743909
Alignment:
Q  135 ttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaa 202  Q
    ||||||||| |||||| |||||||||||  ||||||||||||| |||| ||| |||||||| ||||||    
T  25743842 ttaaggatactaaaaaaggaaattatatagtaattattgcattaaaaattgtgtaattaattcataaa 25743909  T

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Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 43787067 - 43787020
Alignment:
Q  92 aataaaatatgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  43787067 aataaaataagggtcctgctaaccggtgcccccggggcactggttaag 43787020  T

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Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 17752703 - 17752777
Alignment:
Q  121 ccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    ||||||||||||||||||||||| ||||| || |||| ||||  || ||||||| ||||||| ||| ||||||||    
T  17752703 ccccggggcactggttaaggatactaaaatggtaaatcatatagtatttattgcgttgaaaattgtgtaattaat 17752777  T

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Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 19054023 - 19054097
Alignment:
Q  121 ccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    ||||||||||||||||||||||| ||||| || |||| ||||  || ||||||| ||||||| ||| ||||||||    
T  19054023 ccccggggcactggttaaggatactaaaatggtaaatcatatagtatttattgcgttgaaaattgtgtaattaat 19054097  T

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Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 41304010 - 41304083
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||| |||||||| ||||||||||| || |||| |||||||||||  |||||| ||||||||||    
T  41304010 atgctaaccggtgcctccggggcagtggttaaggat-atgaaaaaggaaattatatagtaattaatgcattgaaa 41304083  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 46352639 - 46352692
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattata 161  Q
    |||||||||| ||||||||||||||||||||||||| || |||| ||||||||||    
T  46352639 atgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattata 46352692  T

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Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 52520686 - 52520759
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||||||||||||||||| | || |||| |||||||||||  || ||| ||||||||||    
T  52520686 atgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattgaaa 52520759  T

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Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 40614462 - 40614522
Alignment:
Q  135 ttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    ||||||||| ||||||||||||||||||  || ||||||||||||||| ||| ||| ||||    
T  40614462 ttaaggatactaaaaagggaaattatatagtagttattgcattgaaaattgtgtaactaat 40614522  T

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Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 4168188 - 4168242
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatat 162  Q
    |||||||||| |||| |||||| ||||||||||||| ||||||| |||||||||||    
T  4168188 atgctaaccggtgcctccggggaactggttaaggat-ataaaaaaggaaattatat 4168242  T

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Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 139
Target Start/End: Complemental strand, 6842807 - 6842768
Alignment:
Q  100 atgggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  6842807 atgggtcctgctaaccgctgcccccggggcactggttaag 6842768  T

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Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 31436313 - 31436367
Alignment:
Q  154 aaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    |||||||||  ||||||||||||| |||| ||| |||||||| ||||||||||||    
T  31436313 aaattatatagtaattattgcattaaaaattgtgtaattaattcataaataagtc 31436367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 23516621 - 23516588
Alignment:
Q  108 tgctaaccgatgcccccggggcactggttaagga 141  Q
    ||||||||| ||||||||||||||||||||||||    
T  23516621 tgctaaccggtgcccccggggcactggttaagga 23516588  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 52520867 - 52520830
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaag 139  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  52520867 gggtcctgctaaccggtgcccccggggcactggttaag 52520830  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 2391630 - 2391685
Alignment:
Q  125 ggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||||||||||||| ||||| |||||||||||  || ||| ||||||||||    
T  2391630 ggggcactggttaaggataagaaaaa-ggaaattatatagtagttaatgcattgaaa 2391685  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 2393391 - 2393446
Alignment:
Q  125 ggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||||||||||||| ||||| |||||||||||  || ||| ||||||||||    
T  2393391 ggggcactggttaaggataagaaaaa-ggaaattatatagtagttaatgcattgaaa 2393446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 13899051 - 13898979
Alignment:
Q  130 actggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaa 202  Q
    ||||||||| |||  |||||| | |||||||||  ||||||||| |||||||| | | |||||||||||||||    
T  13899051 actggttaaagatgctaaaaaagaaaattatatagtaattattgtattgaaaattttgtaattaatccataaa 13898979  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 23925285 - 23925364
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtt 187  Q
    |||||||| | | ||||||||| |||||||||| ||| |||||| |||||||||||  |||||| |||||| ||| |||||    
T  23925285 atgctaactggtacccccggggaactggttaagaata-taaaaaaggaaattatatagtaattaatgcattaaaatatgtt 23925364  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 36545128 - 36545184
Alignment:
Q  102 gggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaatt 158  Q
    ||||| || |||||| ||||||||||||||||||||| || | |||||||| |||||    
T  36545128 gggtcttgttaaccggtgcccccggggcactggttaaagaaactaaaaaggaaaatt 36545184  T

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Target: scaffold0001 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 509144 - 509070
Alignment:
Q  134 gttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaataagtc 208  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||| |||||||||||| ||||||||||||    
T  509144 gttaaggataataaaaatggaaattatatgttaattattgaattgaaaattgtttaattaattcataaataagtc 509070  T

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Target: scaffold0264 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 22966 - 23039
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| ||||||||| ||||||||||||||| || |||| |||||||||||  |||||| | ||||||||    
T  22966 atgctaaccggtgcccccggagcactggttaaggat-atgaaaaaggaaattatatagtaattaatacattgaaa 23039  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 53866 - 53780
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaat 195  Q
    |||||||||| ||||||||||||||||||||||| | || |||| |||||||||||  || ||| |||||| |||| ||| ||||||||    
T  53866 atgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcatt-aaaattgtgtaattaat 53780  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 116209 - 116282
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatcttaattattgcattgaaa 181  Q
    |||||||||| |||||||||||||| |||||| ||| || |||| |||||||||||  || ||| ||||||||||    
T  116209 atgctaaccggtgcccccggggcacaggttaaagat-atgaaaaaggaaattatatagtagttaatgcattgaaa 116282  T

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Target: scaffold0188 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 6291 - 6246
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggataataaaaagg 152  Q
    |||||||||| |||||| |||||||||||||||||||  |||||||    
T  6291 atgctaaccggtgcccctggggcactggttaaggatatgaaaaagg 6246  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 50540 - 50607
Alignment:
Q  94 taaaatatgggtcatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatat 162  Q
    |||||||||||  ||| |||||| |||| |||||||||||||||| ||| || |||| |||||||||||    
T  50540 taaaatatgggaaatgttaaccggtgcctccggggcactggttaaagat-atgaaaaaggaaattatat 50607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 66430 - 66498
Alignment:
Q  134 gttaaggataataaaaagggaaattatatcttaattattgcattgaaaaatgtttaattaatccataaa 202  Q
    ||||||||||  |||||  ||| ||||||  || ||||||||||||||| ||| |||||||||||||||    
T  66430 gttaaggatacgaaaaaatgaagttatataatagttattgcattgaaaattgtgtaattaatccataaa 66498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 68471 - 68435
Alignment:
Q  107 atgctaaccgatgcccccggggcactggttaaggata 143  Q
    |||||||| | ||||||||||||||||||||||||||    
T  68471 atgctaactggtgcccccggggcactggttaaggata 68435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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