View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9663_high_9 (Length: 258)
Name: NF9663_high_9
Description: NF9663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9663_high_9 |
 | |
|
| [»] chr4 (5 HSPs) |
| |
|
| [»] chr2 (10 HSPs) |
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|
Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 28)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 9 - 255
Target Start/End: Original strand, 13333088 - 13333334
Alignment:
| Q |
9 |
aatgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaata |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||||||||||| | ||||| |||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
13333088 |
aatgttgtggccattcaaggttacttctggtgtcaacgacaagcctatgattaccgctaagtgcaagggtcaagagaagcacttttgtgccgaggaaata |
13333187 |
T |
|
| Q |
109 |
tcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgatt |
208 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13333188 |
tcatctatggtccttacaaagatgcgagaggttgcagaggcatatatggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaatgatt |
13333287 |
T |
|
| Q |
209 |
ctcaacgaaaggccactatagatgctggtgctattgctggccttaat |
255 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13333288 |
ctcagcgaaaggccaccatagatgctggtgctattgctggccttaat |
13333334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 9 - 258
Target Start/End: Original strand, 10494006 - 10494255
Alignment:
| Q |
9 |
aatgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaata |
108 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| | |||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
10494006 |
aatgttgtggccattcaaggttacttcaggtgtcaatgacaaacctatgattaccgctaagtacaagggtcaagagaagcacttttgtgccgaggaaata |
10494105 |
T |
|
| Q |
109 |
tcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgatt |
208 |
Q |
| |
|
|| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10494106 |
tcatctatggtccttataaagatgcgagaggttgcagaggcatatttggggtcaccagtcaagaatgctgttgttactgtgccggcttacttcaacgatt |
10494205 |
T |
|
| Q |
209 |
ctcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc |
258 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10494206 |
ctcaacgaaaggctactattgatgctggtgctattgctggccttaatgtc |
10494255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 8667953 - 8667706
Alignment:
| Q |
11 |
tgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatc |
110 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8667953 |
tgttgtggccattcaaggttatttctggtgttaatgacaaacctatgattactgttaagtacaagggtcaagagaagcacttttgtgctgaggaaatatc |
8667854 |
T |
|
| Q |
111 |
ttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattct |
210 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
8667853 |
ttctatggtgcttacaaagatgcgagaggttgcggaggcatatctggggtcgccggtcaagaatgccgttgttactgtgccagcttacttcaatgattct |
8667754 |
T |
|
| Q |
211 |
caacgaaaggccactatagatgctggtgctattgctggccttaatgtc |
258 |
Q |
| |
|
|| ||||||||||| |||||||||||| |||||||||| ||||||||| |
|
|
| T |
8667753 |
cagcgaaaggccaccatagatgctggtactattgctggacttaatgtc |
8667706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 8671264 - 8671511
Alignment:
| Q |
11 |
tgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatc |
110 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||||| | |||| ||| ||||| |||||||||||||||||||| |
|
|
| T |
8671264 |
tgttgtggccattcaaggttatttctggtgttaatgacaaacctatgattactgtcaagtacgaaggtctagagaagcaattttgtgctgaggaaatatc |
8671363 |
T |
|
| Q |
111 |
ttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattct |
210 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||| ||||||||||| |||||| |
|
|
| T |
8671364 |
ttctatggtgcttacaaagatgcgagaggttgcggaggcatatctggagtcaccggtcaagaatgccgttgttaccgtgccagcttacttcaatgattct |
8671463 |
T |
|
| Q |
211 |
caacgaaaggccactatagatgctggtgctattgctggccttaatgtc |
258 |
Q |
| |
|
|| |||| |||||| || ||||||||| |||||||||| ||||||||| |
|
|
| T |
8671464 |
cagcgaacggccaccattgatgctggtactattgctggacttaatgtc |
8671511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 254
Target Start/End: Complemental strand, 8654985 - 8654741
Alignment:
| Q |
10 |
atgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatat |
109 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||| |
|
|
| T |
8654985 |
atgttgtggccattcatggttacttctggtgttaatgacaaacccatgattactgttaagtacaaaggtcaagagaagcaattttgtgctgaggaaatat |
8654886 |
T |
|
| Q |
110 |
cttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattc |
209 |
Q |
| |
|
| ||| ||| |||||||||||||||||| ||||||||||||| || || ||||| ||||| |||| |||||||||||||||||| |||||||| || || |
|
|
| T |
8654885 |
catctgcggttcttacaaagatgcgagagattgcagaggcataccttggatcacccgtcaaaaatgtcgttgttactgtgccggcatacttcaatgactc |
8654786 |
T |
|
| Q |
210 |
tcaacgaaaggccactatagatgctggtgctattgctggccttaa |
254 |
Q |
| |
|
||| ||||| || || |||||||||||||| |||||||| ||||| |
|
|
| T |
8654785 |
tcagcgaaaagcaaccatagatgctggtgccattgctggacttaa |
8654741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 10 - 258
Target Start/End: Complemental strand, 8659898 - 8659650
Alignment:
| Q |
10 |
atgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatat |
109 |
Q |
| |
|
|||||||||||||||||||||| ||||||| || ||||| | ||||||| ||| ||||||||||||| || |||||||||||||| |||||||||| |
|
|
| T |
8659898 |
atgttgtggccattcaaggttatcgctggtgtgaacgacaaactcatgattaatgttcagtacaagggtcaggagaagcacttttgtgcggaggaaatat |
8659799 |
T |
|
| Q |
110 |
cttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattc |
209 |
Q |
| |
|
| |||||||| |||||||| |||||||| ||||||||| ||||||| |||||| || |||||||| |||||||| ||||| || || ||||| ||||| |
|
|
| T |
8659798 |
catctatggtacttacaaaaatgcgagaagttgcagagacatatctaatgtcacctgtgaagaatgctgttgttacagtgcctgcatagttcaatgattc |
8659699 |
T |
|
| Q |
210 |
tcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc |
258 |
Q |
| |
|
||| ||||| ||||| |||||| | ||||| |||||||||||||||||| |
|
|
| T |
8659698 |
tcagcgaaaagccaccatagattccggtgccattgctggccttaatgtc |
8659650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 257
Target Start/End: Original strand, 8585338 - 8585586
Alignment:
| Q |
9 |
aatgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaata |
108 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| || | ||||||||||||||| |
|
|
| T |
8585338 |
aatgttgtggccattcaaggttatctctggtgttaatgacaaacctatgattactgttaagtacaagggtcaagaaaagaacctatgtgctgaggaaata |
8585437 |
T |
|
| Q |
109 |
tcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgatt |
208 |
Q |
| |
|
|| ||||| |||| ||||| ||| || |||||||| ||||| || ||||| || | ||||| ||||| |||||||| ||||| ||||| |||| |
|
|
| T |
8585438 |
tcatctatcatcctcacaaacatgaagaagattgcagagacatatttgaaatcacctgttcaaaatgcagttgtgactgtgcctgcttatttcaatgatt |
8585537 |
T |
|
| Q |
209 |
ctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
|||| ||||| ||||| || ||||||||||| ||||||||||||||||| |
|
|
| T |
8585538 |
ctcagcgaaaagccaccatggatgctggtgccattgctggccttaatgt |
8585586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 258
Target Start/End: Complemental strand, 1301999 - 1301751
Alignment:
| Q |
10 |
atgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatat |
109 |
Q |
| |
|
|||||||||||||||||||| | | ||||| |||||||| || ||||| ||||||||||||||||| || ||||||||||| | |||||||||| |
|
|
| T |
1301999 |
atgttgtggccattcaaggtcatcgccggtgtgaatgacaaacccgtgattgttgttaagtacaagggtcaggagaagcacttttgcgtggaggaaatat |
1301900 |
T |
|
| Q |
110 |
cttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattc |
209 |
Q |
| |
|
| |||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| | ||||| |||||||||||||| || | ||||| ||||| |
|
|
| T |
1301899 |
catctatggtccttacgaagatgcgagaaattgcagagacatatctaatgtcaccagtgacaaatgctgttgttactgtgcctgcacatttcaatgattc |
1301800 |
T |
|
| Q |
210 |
tcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc |
258 |
Q |
| |
|
||| ||||| ||||| |||||||| ||||| |||||||||||||||||| |
|
|
| T |
1301799 |
tcagcgaaaagccaccatagatgccggtgcaattgctggccttaatgtc |
1301751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 10 - 257
Target Start/End: Complemental strand, 8629067 - 8628820
Alignment:
| Q |
10 |
atgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatat |
109 |
Q |
| |
|
||||| |||||||||||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||| ||| || | |||||||||||||||| |
|
|
| T |
8629067 |
atgttctggccattcaaggttatttctggtcttaatgacaagcctatgattgctgttaagtacaagggtcaagagaagaacctatgtgctgaggaaatat |
8628968 |
T |
|
| Q |
110 |
cttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattc |
209 |
Q |
| |
|
| ||||| ||||| |||| ||| || |||||||||| ||| || ||||| || || ||||| ||||| || ||||| ||||| ||||| ||||| |
|
|
| T |
8628967 |
catctattatccttgcaaatatgaagaagattgcagaggcttatttgaaatcacctgtaaaaaatgcagttgtcaccgtgcctgcttatttcaatgattc |
8628868 |
T |
|
| Q |
210 |
tcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
||| ||||| ||||| || |||||||||| ||||||||||||||||| |
|
|
| T |
8628867 |
tcagcgaaaagccaccatgaatgctggtgccattgctggccttaatgt |
8628820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 257
Target Start/End: Original strand, 7877367 - 7877613
Alignment:
| Q |
11 |
tgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatc |
110 |
Q |
| |
|
||||||||||||| |||||| | ||||| | ||||||||||| || | |||||||| ||||| | || |||||||||||||| ||||||||||| |
|
|
| T |
7877367 |
tgttgtggccatttaaggttgttgctggttctgatgacaagcctgatatcattgttaagtataagggcgaggaaaagcacttttgtgccgaggaaatatc |
7877466 |
T |
|
| Q |
111 |
ttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattct |
210 |
Q |
| |
|
|| ||| |||||||||||||||| ||| |||||||| | | ||| |||||| ||||||||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
7877467 |
atccatgatccttacaaagatgcgcgagattgcagagaagtttttggagtcacctgtcaagaatgcagttgttactgtgccggcttatttcaatgattct |
7877566 |
T |
|
| Q |
211 |
caacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
|||||||| ||||| | |||||||||||| |||| ||||| ||||| |
|
|
| T |
7877567 |
caacgaaaagccacaaaagatgctggtgcagttgccggcctcaatgt |
7877613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 255
Target Start/End: Complemental strand, 8647407 - 8647167
Alignment:
| Q |
12 |
gttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatct |
111 |
Q |
| |
|
|||||||||||||||||| | | || || |||||||| || ||||||| ||||| ||||||||| |||| |||| | |||||||||||||||||| |
|
|
| T |
8647407 |
gttgtggccattcaaggtcatt---ggggtgaatgacaaacccatgattattgttaaatacaagggtgaagagaagcgttattgtgctgaggaaatatca |
8647311 |
T |
|
| Q |
112 |
tctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctc |
211 |
Q |
| |
|
|| ||| |||| |||||||||||||||||||||||| |||| | ||| || || |||||||| |||||||||||||| || |||||||| |||| || |
|
|
| T |
8647310 |
tcgatgatcctcacaaagatgcgagaggttgcagagaaatatttaatgtcccctgtaaagaatgcagttgttactgtgcctgcatacttcaatgattatc |
8647211 |
T |
|
| Q |
212 |
aacgaaaggccactatagatgctggtgctattgctggccttaat |
255 |
Q |
| |
|
| ||||| |||||||||||||| || || ||||||||||||||| |
|
|
| T |
8647210 |
agcgaaaagccactatagatgccggggccattgctggccttaat |
8647167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 257
Target Start/End: Complemental strand, 8602455 - 8602262
Alignment:
| Q |
64 |
gttaagtacaagggtcaagataagcacttttgtgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcac |
163 |
Q |
| |
|
|||||||| |||||| || |||||||| |||||||||||||| || || |||||||||||||||||||| || |||||||| | ||||| ||||| |
|
|
| T |
8602455 |
gttaagtataagggtggggaaaagcacttctgtgctgaggaaatctcatcaatggtccttacaaagatgcgtgaaattgcagagaagtttctggagtcac |
8602356 |
T |
|
| Q |
164 |
cagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||| || || |||||||| ||||| ||||| | |||||||||||| |||||||| || ||||| |
|
|
| T |
8602355 |
ctgtcaagaatgcagttgttactgtgccggcttattttaatgattctcagcgaaaagccacaaaagatgctggtgccattgctggtctcaatgt |
8602262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 257
Target Start/End: Complemental strand, 17268475 - 17268227
Alignment:
| Q |
9 |
aatgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaata |
108 |
Q |
| |
|
||||| ||||||||||||||| | | | | | | |||||||| || |||||| | | ||||||||||| | || || ||||||||||| |||||||| |
|
|
| T |
17268475 |
aatgtcgtggccattcaaggtcattgcggatatgaatgacaaaccaatgatttccctcaagtacaagggacgggagaaacacttttgtgcagaggaaatt |
17268376 |
T |
|
| Q |
109 |
tcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgatt |
208 |
Q |
| |
|
|| |||||||| || ||||||||||| ||| |||| |||| |||||| | ||| | || | |||||| || ||||||| ||||||||||||||||||| |
|
|
| T |
17268375 |
tcgtctatggtactcacaaagatgcgggagattgctgaggaatatctagaatcatcggttatgaatgctgtcattactgtcccggcttacttcaacgatt |
17268276 |
T |
|
| Q |
209 |
ctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
|||| ||||| ||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
17268275 |
ctcagcgaaaagccaccatagatgctggtgtcattgctggccttaatgt |
17268227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 8636064 - 8636223
Alignment:
| Q |
98 |
ctgaggaaatatcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggctta |
197 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||| ||| | ||||||||||| || |||||||||| ||||| |
|
|
| T |
8636064 |
ctgaggaaatatcgtctatggtcctgacaaagatgcgagagattgctgaggcatatctggaatcatctgtcaagaatgcagtcattactgtgcccgctta |
8636163 |
T |
|
| Q |
198 |
cttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
||||| |||||||| || || |||| | |||||||||||| ||||| ||||||||||| |
|
|
| T |
8636164 |
tttcaatgattctcagcgtaaatccaccaaagatgctggtgccattgccggccttaatgt |
8636223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 257
Target Start/End: Original strand, 27830562 - 27830755
Alignment:
| Q |
64 |
gttaagtacaagggtcaagataagcacttttgtgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcac |
163 |
Q |
| |
|
|||||||||||| |||| || || ||||| ||||| |||||||| || || |||||||||||||||||||||||| | || ||||||||| || |||| |
|
|
| T |
27830562 |
gttaagtacaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagatcgcggaggcatatttgcaatcac |
27830661 |
T |
|
| Q |
164 |
cagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
| || |||||||| || | || ||||| ||||| ||||| || ||||||||||| |||||| ||||| | ||||| ||||||||||||||||| |
|
|
| T |
27830662 |
cggttaagaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggccttaatgt |
27830755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 255
Target Start/End: Original strand, 8640184 - 8640425
Alignment:
| Q |
12 |
gttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatct |
111 |
Q |
| |
|
|||||||||||||||||| | | || || |||||||| || | ||||| ||||| ||||||||| |||| |||| |||||||| ||||||||||| |
|
|
| T |
8640184 |
gttgtggccattcaaggtcatt---ggggtgaatgacaaacccacgattattgttaaatacaagggtgaagagaagcgtttttgtgccgaggaaatatca |
8640280 |
T |
|
| Q |
112 |
tctatggtccttacaaagatgcgagaggttgcagaggcatatctggggt-caccagtcaagaatgccgttgttactgtgccggcttacttcaacgattct |
210 |
Q |
| |
|
|||||| ||||| | ||||||||||||||||||||| |||| | || | || || |||||||| ||||||||| |||| ||||||||||| |||| | |
|
|
| T |
8640281 |
tctatgatcctttcgaagatgcgagaggttgcagagaaatatttaatgtccccccgtaaagaatgcagttgttactatgcctgcttacttcaatgattat |
8640380 |
T |
|
| Q |
211 |
caacgaaaggccactatagatgctggtgctattgctggccttaat |
255 |
Q |
| |
|
|| | ||| ||||| |||||||| || || ||||||||||||||| |
|
|
| T |
8640381 |
cagcaaaaagccaccatagatgccggggccattgctggccttaat |
8640425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 3147807 - 3147562
Alignment:
| Q |
10 |
atgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatat |
109 |
Q |
| |
|
|||||||||||||||||||| | || || || |||||||| || |||||| ||||||||| |||||| || || |||||| | |||||||| ||||| | |
|
|
| T |
3147807 |
atgttgtggccattcaaggtcatttgcggagtgaatgacaaacccatgatttcggttaagtgcaagggacaggagaagcacctatgtgctgaagaaatct |
3147708 |
T |
|
| Q |
110 |
cttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattc |
209 |
Q |
| |
|
| |||||||| || ||||||||||| || |||||||| | | | | | || ||||||||||| |||||||| || || ||||| ||||| ||| | |
|
|
| T |
3147707 |
catctatggttctaacaaagatgcgcaagactgcagaggagtttttagaattgcctgtcaagaatgcagttgttaccgtacctgcttatttcaatgatgc |
3147608 |
T |
|
| Q |
210 |
tcaacgaaaggccactatagatgctggtgctattgctggccttaat |
255 |
Q |
| |
|
||| || || || || ||||||||||||| |||||||||||||||| |
|
|
| T |
3147607 |
tcagcggaaagcgacaatagatgctggtgttattgctggccttaat |
3147562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 257
Target Start/End: Original strand, 8382563 - 8382756
Alignment:
| Q |
64 |
gttaagtacaagggtcaagataagcacttttgtgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcac |
163 |
Q |
| |
|
|||||||| |||||| | || || ||| ||||||| |||||||| || ||||||||||| | ||||||||| ||| |||||||| | | ||| ||||| |
|
|
| T |
8382563 |
gttaagtataagggtgaggaaaaacacctttgtgccgaggaaatctcctctatggtcctcaaaaagatgcgtgagattgcagagaattttttggagtcac |
8382662 |
T |
|
| Q |
164 |
cagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
| || |||||| |||||||| ||||| || || ||||| ||||||||||| || ||||| | |||||||||||| ||||||||||| ||||| |
|
|
| T |
8382663 |
ctatcgagaatgtagttgttaccgtgcctgcatatttcaatgattctcaacggaaagccacaaaagatgctggtgcgattgctggcctcaatgt |
8382756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 257
Target Start/End: Complemental strand, 6790047 - 6789800
Alignment:
| Q |
10 |
atgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatat |
109 |
Q |
| |
|
||||| |||||||||||||| | | |||| || ||||||||||| |||||| ||| |||| |||||| | || ||||| | |||| ||||||| | | |
|
|
| T |
6790047 |
atgttttggccattcaaggtcattgctggcgtcaatgacaagcccatgattgttgttgagtataagggtgaggagaagcaactatgtgttgaggaagttt |
6789948 |
T |
|
| Q |
110 |
cttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattc |
209 |
Q |
| |
|
| |||||| |||| || |||||||| ||| |||| ||| |||| || |||| | || ||||| ||| |||||||||| ||||| ||||| ||||| |
|
|
| T |
6789947 |
cgtctatgatcctcaccaagatgcgggagattgctgagaaatatttgcagtcagagataaaaaatgcagttattactgtgcctgcttatttcaatgattc |
6789848 |
T |
|
| Q |
210 |
tcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
|||||| || |||||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
6789847 |
tcaacggaaagccactttagatgctggtgccattgctggtcttaatgt |
6789800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 257
Target Start/End: Complemental strand, 17260777 - 17260529
Alignment:
| Q |
9 |
aatgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaata |
108 |
Q |
| |
|
||||| ||||||||||||||| | | | | | | |||||||| || |||||| | | ||||||||||| | || || ||||||||||| |||||||| |
|
|
| T |
17260777 |
aatgtcgtggccattcaaggtcattgcggatatgaatgacaaaccaatgatttccctcaagtacaagggacgggagaaacacttttgtgcagaggaaatc |
17260678 |
T |
|
| Q |
109 |
tcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgatt |
208 |
Q |
| |
|
|| |||||||| ||| |||||||| ||| |||| |||| |||||| | ||| | || | |||| ||| ||||||| || ||||| ||||| |||| |
|
|
| T |
17260677 |
tcgtctatggtacttgtgaagatgcgggagattgctgaggtatatcttgaatcatcggttattaatgttgttattactgttcctgcttatttcaatgatt |
17260578 |
T |
|
| Q |
209 |
ctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
|||| ||||| ||||| ||||||||||||| ||||||||||||| |||| |
|
|
| T |
17260577 |
ctcagcgaaaagccaccatagatgctggtgttattgctggcctttatgt |
17260529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 8591170 - 8590934
Alignment:
| Q |
13 |
ttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatctt |
112 |
Q |
| |
|
||||||||||| |||||| ||| ||| || ||||||||||| || | ||||||||||||||| | || |||| ||||||| |||||||| || | |
|
|
| T |
8591170 |
ttgtggccatttaaggttgtttccggttttgatgacaagcctgaaatcattgttaagtacaagggtgaggaaaagcgtctttgtgcggaggaaatctcat |
8591071 |
T |
|
| Q |
113 |
ctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctca |
212 |
Q |
| |
|
| ||||| || ||||||||||||||| |||| || | | ||| |||||| ||||||||||| |||||||||||||| ||||| || || |||||||| |
|
|
| T |
8591070 |
ccatggttctcacaaagatgcgagagattgctgaaaagtttttggagtcacctgtcaagaatgcagttgttactgtgccagcttattttaatgattctca |
8590971 |
T |
|
| Q |
213 |
acgaaaggccactatagatgctggtgctattgctggc |
249 |
Q |
| |
|
| || || || | ||||||||||| ||||||||| |
|
|
| T |
8590970 |
gaggaaagctaccaaagatgctggtgtcattgctggc |
8590934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 8546166 - 8545963
Alignment:
| Q |
11 |
tgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatc |
110 |
Q |
| |
|
|||||||||| || ||||| | ||| |||||||||||||| || | ||| || || ||||||||| | || ||||||||| |||||| |||||||| |
|
|
| T |
8546166 |
tgttgtggccctttaaggtcatttccggtgttaatgacaaaccgacaattcttgtgaactacaagggtgaggaaaagcactttgttgctgaagaaatatc |
8546067 |
T |
|
| Q |
111 |
ttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattct |
210 |
Q |
| |
|
||| || |||| || ||||||||||| |||||||||||| | ||| |||||| || |||||||| || ||||||| || ||||| || || ||||| |
|
|
| T |
8546066 |
atctgtgatcctctcacagatgcgagagattgcagaggcatttttggagtcacctgttaagaatgcagtgattactgtacctgcttattttaatgattca |
8545967 |
T |
|
| Q |
211 |
caac |
214 |
Q |
| |
|
|||| |
|
|
| T |
8545966 |
caac |
8545963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 8576775 - 8576613
Alignment:
| Q |
96 |
tgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggct |
195 |
Q |
| |
|
|||||| |||||||| ||| || | || |||||||||||||| |||||||||| | |||| | |||| || |||||||| || || ||||||| ||| |
|
|
| T |
8576775 |
tgctgaagaaatatcatctgtgattctctcaaagatgcgagagattgcagaggcttttctgcagacacctgttaagaatgcagtgatttctgtgcctgct |
8576676 |
T |
|
| Q |
196 |
tacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc |
258 |
Q |
| |
|
|| || || ||||| ||||||| ||||||| |||||| ||||| |||||||| || |||||| |
|
|
| T |
8576675 |
tattttaatgattcccaacgaagagccactaaagatgcaggtgcaattgctggtctcaatgtc |
8576613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 8017100 - 8017245
Alignment:
| Q |
64 |
gttaagtacaagggtcaagataagcacttttgtgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcac |
163 |
Q |
| |
|
||||| ||||||||| | || ||||| ||| |||||||||||| || |||||||| || | ||||||||| ||| |||| || || || || || ||| |
|
|
| T |
8017100 |
gttaactacaagggtgaggacaagcaatttgctgctgaggaaatttcgtctatggtactcataaagatgcgtgagattgctgaagcttacctcggttcaa |
8017199 |
T |
|
| Q |
164 |
cagtcaagaatgccgttgttactgtgccggcttacttcaacgattc |
209 |
Q |
| |
|
| || ||||||||||||||||| || || ||||||||||| ||||| |
|
|
| T |
8017200 |
ctgtgaagaatgccgttgttacagttccagcttacttcaatgattc |
8017245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 257
Target Start/End: Complemental strand, 8538493 - 8538324
Alignment:
| Q |
88 |
cacttttgtgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactg |
187 |
Q |
| |
|
||||||| |||||| |||||||| |||||||||| ||||||||||| ||| | || || | || | ||| |||||| ||||| ||||| || |||| | |
|
|
| T |
8538493 |
cacttttttgctgaagaaatatcagctatggtcctcacaaagatgcgggagttcgctgaagtatttttggagtcacctgtcaaaaatgcagtgattacag |
8538394 |
T |
|
| Q |
188 |
tgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
| || ||||| ||||| ||||| || |||| ||||| | ||||||||||| ||||||||||| ||||| |
|
|
| T |
8538393 |
tacctgcttatttcaatgattcacagcgaagagccaccaaagatgctggtgtcattgctggcctcaatgt |
8538324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 257
Target Start/End: Original strand, 29577356 - 29577549
Alignment:
| Q |
64 |
gttaagtacaagggtcaagataagcacttttgtgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcac |
163 |
Q |
| |
|
|||||||||||||| |||| ||| |||| ||||||||||||||| |||||| |||| ||||||||| ||| |||||||| || | ||| || || |
|
|
| T |
29577356 |
gttaagtacaagggcaaagagaagtgctttgttgctgaggaaatatcgtctatgatcctctcaaagatgcaggagattgcagagaaatttttggagttac |
29577455 |
T |
|
| Q |
164 |
cagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
| || |||||||| || | || ||||| ||||| ||||| |||||||| ||||| ||||| | |||||| || |||||||||||| ||||| |
|
|
| T |
29577456 |
ccgtaaagaatgcagtgatcacagtgccagcttatttcaatgattctcagcgaaaagccaccaaagatgccggcattattgctggcctcaatgt |
29577549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 238
Target Start/End: Complemental strand, 8582175 - 8582007
Alignment:
| Q |
70 |
tacaagggtcaagataagcacttttgtgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtca |
169 |
Q |
| |
|
||||||||| | || || |||||| |||||| |||||||| ||| | | || ||| ||||||||||| |||||||||||| | ||| |||||| || | |
|
|
| T |
8582175 |
tacaagggtaaggaaaaacactttcttgctgaagaaatatcatctgttattctgacacagatgcgagagattgcagaggcatttttggagtcacctgtta |
8582076 |
T |
|
| Q |
170 |
agaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtg |
238 |
Q |
| |
|
||||||| || ||||||| || ||||| || || ||||| ||||||| ||||||| |||||| |||| |
|
|
| T |
8582075 |
agaatgcagtgattactgtacctgcttattttaatgattcacaacgaagagccactaaagatgcaggtg |
8582007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 257
Target Start/End: Complemental strand, 8570731 - 8570599
Alignment:
| Q |
125 |
caaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccac |
224 |
Q |
| |
|
|||||||||||||| ||||||| |||| | ||| ||| || || |||||||| || ||||||| || ||||| || || ||||| ||||||| ||||| |
|
|
| T |
8570731 |
caaagatgcgagagattgcagaagcatttttggagtctcctgttaagaatgcagtgattactgtacctgcttattttaatgattcacaacgaagagccac |
8570632 |
T |
|
| Q |
225 |
tatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
|| |||||| |||| |||||||| || ||||| |
|
|
| T |
8570631 |
taaagatgcaggtgaaattgctggtctcaatgt |
8570599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 176; Significance: 7e-95; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 9335525 - 9335772
Alignment:
| Q |
11 |
tgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatc |
110 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
9335525 |
tgttgtggccattcaaggttatttctggtgttaatgacaaacctatgattactgttaactacaagggtcaagagaagcacttttgtgctgaggaaatatc |
9335624 |
T |
|
| Q |
111 |
ttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattct |
210 |
Q |
| |
|
||||||| | |||||||||||| |||||||||| ||||||||| ||||||| || |||||||||||||||||||| ||||| ||||||||||| |||||| |
|
|
| T |
9335625 |
ttctatgttgcttacaaagatgagagaggttgcggaggcatatttggggtcgccggtcaagaatgccgttgttaccgtgccagcttacttcaatgattct |
9335724 |
T |
|
| Q |
211 |
caacgaaaggccactatagatgctggtgctattgctggccttaatgtc |
258 |
Q |
| |
|
|| ||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
9335725 |
cagcgaaaggccaccatagatgctggtactattgctggccttaatgtc |
9335772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 248
Target Start/End: Complemental strand, 35132975 - 35132745
Alignment:
| Q |
16 |
tggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatcttcta |
115 |
Q |
| |
|
|||||||||||||| ||| | ||||| |||||||| || |||||||||||||||||||||| | | || ||||| | | ||| || ||| |||| || | |
|
|
| T |
35132975 |
tggccattcaaggtcactgccggtgtaaatgacaaacccatgattacggttaagtacaaggatgaggaaaagcaactctatgcggaagaagtatcatcca |
35132876 |
T |
|
| Q |
116 |
tggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacg |
215 |
Q |
| |
|
|||| || |||||||||||||| |||||| |||||| | | ||| | || |||||||| |||||||||||||| ||||| || | ||||||||||| |
|
|
| T |
35132875 |
tggtactcacaaagatgcgagaaattgcag--gcatatttagaatcaactgttaagaatgcagttgttactgtgcctgcttattttagtgattctcaacg |
35132778 |
T |
|
| Q |
216 |
aaaggccactatagatgctggtgctattgctgg |
248 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| |
|
|
| T |
35132777 |
aaaagccactatagatgctggtgctattgctgg |
35132745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 30775786 - 30775540
Alignment:
| Q |
11 |
tgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatc |
110 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| || |||||| | |||||| |||||| || || || | | | ||||| |||||||| || |
|
|
| T |
30775786 |
tgttgtggccattcaaggttgtttctggtgttaatgacaaacccatgatttcccttaagttcaagggccaggagaaactcctctgtgccgaggaaatttc |
30775687 |
T |
|
| Q |
111 |
ttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattct |
210 |
Q |
| |
|
|| || ||||| ||||| ||| ||||| |||||||| ||| ||| || ||||| || ||||| ||| | |||||||| ||||| ||||| ||| | |
|
|
| T |
30775686 |
atcaatagtcctcacaaatatgagagagattgcagagatgtatttggaatccccagttaaaaatgcagttatcactgtgcctgcttatttcaatgatgca |
30775587 |
T |
|
| Q |
211 |
caacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
|| ||||| |||||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
30775586 |
cagcgaaaagccactatggatgctggtgccattgctggtcttaatgt |
30775540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 23587436 - 23587571
Alignment:
| Q |
80 |
aagataagcacttttgtgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgt |
179 |
Q |
| |
|
|||| ||||| |||| ||||| || |||||||||||||| |||| || ||| ||| |||||||||| ||||| || || | | ||||||||||| |
|
|
| T |
23587436 |
aagagaagcaattttccgctgaagagatatcttctatggttcttatgaaaatgaaggagattgcagaggcttatcttggtacaacgattaagaatgccgt |
23587535 |
T |
|
| Q |
180 |
tgttactgtgccggcttacttcaacgattctcaacg |
215 |
Q |
| |
|
||| |||||||| ||||||||||||||||| ||||| |
|
|
| T |
23587536 |
tgtaactgtgcctgcttacttcaacgattcacaacg |
23587571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 54396805 - 54396725
Alignment:
| Q |
163 |
ccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctatt |
243 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||| ||||| ||||||||||| | || || | |||||||||||||||| |
|
|
| T |
54396805 |
ccagtgaagaatgctgttgttactgttcctgcttatttcaatgattctcaacgtcaagctacgaaagatgctggtgctatt |
54396725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 258
Target Start/End: Original strand, 16657153 - 16657398
Alignment:
| Q |
13 |
ttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatctt |
112 |
Q |
| |
|
||||||||||||||||| | | | || || |||||||| || |||||||| || |||| ||||||||||| | || |||||||||||||||||||| | |
|
|
| T |
16657153 |
ttgtggccattcaaggtcattgccggagtgaatgacaaaccaatgattactcttcagtataagggtcaagagagccaattttgtgctgaggaaatatcat |
16657252 |
T |
|
| Q |
113 |
ctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctca |
212 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||||||| | ||| ||| || ||||||||||| |||||||||||||| ||||||||||| ||||| || |
|
|
| T |
16657253 |
ctatgatccttacaaagatgcgagaagttgctgaggcatttatggagtcgcctgtcaagaatgctgttgttactgtgccagcttacttcaatgattcgca |
16657352 |
T |
|
| Q |
213 |
acgaaaggccactatagatgctggtgctattgctggccttaatgtc |
258 |
Q |
| |
|
||||| ||||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
16657353 |
gcgaaaagccaccatagatgctggtgccatcgctggccttaatgtc |
16657398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 16661626 - 16661869
Alignment:
| Q |
11 |
tgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatc |
110 |
Q |
| |
|
|||||||||| |||||||||| | |||||||||||||||| |||| ||||| ||||||||||||||||| || |||| | ||||||| |||||||| || |
|
|
| T |
16661626 |
tgttgtggccgttcaaggttattgctggtgttaatgacaaacctacgattagtgttaagtacaagggtcaggagaagctcctttgtgccgaggaaatctc |
16661725 |
T |
|
| Q |
111 |
ttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattct |
210 |
Q |
| |
|
||||| ||||| ||||| ||| |||||||||||||| ||| ||| ||||| || || ||||| ||||| ||||| || ||||| || ||||||||| |
|
|
| T |
16661726 |
atctattgtcctcacaaacatgaaggaggttgcagaggcttatttggaatcaccggttaaaaatgcagttgtcactgttcctgcttattttaacgattct |
16661825 |
T |
|
| Q |
211 |
caacgaaaggccactatagatgctggtgctattgctggccttaa |
254 |
Q |
| |
|
|| ||||| ||||| || ||||||||||| |||||||||||||| |
|
|
| T |
16661826 |
cagcgaaaagccaccatggatgctggtgccattgctggccttaa |
16661869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 257
Target Start/End: Complemental strand, 12235224 - 12234977
Alignment:
| Q |
10 |
atgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatat |
109 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||||||| || ||||||| || ||||||||||||| ||| ||||| | ||| | || ||| ||| |
|
|
| T |
12235224 |
atgttgtggccattcaaggtcgctgctggtgtcaatgacaaacccatgattattgtcaagtacaagggtcgagagaagcagctatgtcccgaagaagtat |
12235125 |
T |
|
| Q |
110 |
cttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattc |
209 |
Q |
| |
|
| |||||||| || |||||||||||||| | || ||||||||| | | ||||| |||||||| |||||||| ||||| ||||| ||||| ||||| |
|
|
| T |
12235124 |
catctatggtactcacaaagatgcgagaaatcgctgaggcatatttacaatttccagttaagaatgcagttgttaccgtgcctgcttatttcaatgattc |
12235025 |
T |
|
| Q |
210 |
tcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
||||||||| || |||||||||||||||| ||||||||||| ||||| |
|
|
| T |
12235024 |
tcaacgaaaagcaactatagatgctggtgtcattgctggcctcaatgt |
12234977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 11999928 - 11999690
Alignment:
| Q |
11 |
tgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatc |
110 |
Q |
| |
|
|||| |||||||||||||| ||| ||| ||| |||||||| || || ||||| ||||||||||| || || || ||||| | |||||||| ||| |||| |
|
|
| T |
11999928 |
tgttatggccattcaaggtcactgctgatgtcaatgacaaaccaataattactgttaagtacaaaggccaggagaagcagctatgtgctgaagaagtatc |
11999829 |
T |
|
| Q |
111 |
ttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattct |
210 |
Q |
| |
|
|||||||| || || ||||||||||| |||| ||||||||| | | ||||| || ||||||| ||||||||||| || ||||| || | |||||| |
|
|
| T |
11999828 |
atctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccggtaaagaatgttgttgttactgtaccagcttattttagtgattct |
11999729 |
T |
|
| Q |
211 |
caacgaaaggccactatagatgctggtgctattgctggc |
249 |
Q |
| |
|
|||||||| |||||||||||||| ||||| ||||||||| |
|
|
| T |
11999728 |
caacgaaaagccactatagatgccggtgcaattgctggc |
11999690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 44 - 257
Target Start/End: Complemental strand, 43625914 - 43625700
Alignment:
| Q |
44 |
atgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgc |
143 |
Q |
| |
|
||||||| || ||||||| || || |||||||||||||| |||| |||||| ||||||||||||| |||||| |||| |||||||||||||||||||| |
|
|
| T |
43625914 |
atgacaaaccaatgattattgtaaaatacaagggtcaagagaagcgtttttgtcctgaggaaatatcgtctatgatcctcacaaagatgcgagaggttgc |
43625815 |
T |
|
| Q |
144 |
agaggcatatctggggt-caccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctat |
242 |
Q |
| |
|
|||| || | | || | || || |||||||| |||||||| ||||| ||||||||||| |||||||| ||||| ||||| ||||||| ||||| || |
|
|
| T |
43625814 |
agagaaatttttaatgtccccccgtaaagaatgcagttgttaccgtgcctgcttacttcaatgattctcagcgaaaagccaccatagatgttggtgtcat |
43625715 |
T |
|
| Q |
243 |
tgctggccttaatgt |
257 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
43625714 |
tgtcggccttaatgt |
43625700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 257
Target Start/End: Original strand, 12258213 - 12258461
Alignment:
| Q |
9 |
aatgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaata |
108 |
Q |
| |
|
||||||||||||||| || || ||| ||||||| |||| ||| || ||||||||||| ||||||||| |||||| ||||| ||||||| |||||| || |
|
|
| T |
12258213 |
aatgttgtggccatttaaagtcactgctggtgtcaatggcaaacccatgattacggtaaagtacaagaatcaagagaagcagctttgtgccgaggaagta |
12258312 |
T |
|
| Q |
109 |
tcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgatt |
208 |
Q |
| |
|
|| ||| |||| | |||||||||||||| |||| ||||||||| | | ||||| || |||||||| |||||||||||||| || || || | |||| |
|
|
| T |
12258313 |
tcatctgtggtattgacaaagatgcgagaaattgctgaggcatatttagaatcacccgttaagaatgcagttgttactgtgcctgcatattttagtgatt |
12258412 |
T |
|
| Q |
209 |
ctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
| ||| | || ||||||||||||| ||| ||||| |||||| ||||| |
|
|
| T |
12258413 |
cacaaaggaaagccactatagatgtgggtaatattgttggcctgaatgt |
12258461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 257
Target Start/End: Original strand, 12245045 - 12245286
Alignment:
| Q |
16 |
tggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatcttcta |
115 |
Q |
| |
|
||||| |||||||| ||| ||||||| |||||||| || || ||||| ||||| ||||| || || || ||||| | |||||||| ||| |||| |||| |
|
|
| T |
12245045 |
tggccgttcaaggtcactgctggtgtcaatgacaaaccaataattactgttaactacaaaggccaggagaagcagctatgtgctgaagaagtatcatcta |
12245144 |
T |
|
| Q |
116 |
tggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacg |
215 |
Q |
| |
|
|||| || |||||||||||||| |||| ||||||||| | | ||||| || |||||||| ||||||||||| || ||||| || | |||||||| || |
|
|
| T |
12245145 |
tggtactaacaaagatgcgagaaattgctgaggcatatttagaatcaccggtaaagaatgctgttgttactgtacctgcttattttagtgattctcagcg |
12245244 |
T |
|
| Q |
216 |
aaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
||| || || ||||||||||| | |||||||| || ||||| |
|
|
| T |
12245245 |
aaaagcaacgatagatgctggctcaattgctggtctcaatgt |
12245286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 7542760 - 7542514
Alignment:
| Q |
11 |
tgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatc |
110 |
Q |
| |
|
|||| |||||||||||||| ||| | |||| ||||||| || |||||||| ||||||||||||| ||| || || || | |||||| || |||| |
|
|
| T |
7542760 |
tgttatggccattcaaggtgactgcgggtgacaatgacagacccatgattaccgttaagtacaaggatcaggagaaacaactccatgctgaagaggtatc |
7542661 |
T |
|
| Q |
111 |
ttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattct |
210 |
Q |
| |
|
|||||||| || |||||||||||||| |||| ||| | ||| | | || | || | |||||| ||||||||||| || ||||| || || |||||| |
|
|
| T |
7542660 |
atctatggtactcacaaagatgcgagaaattgctgagtcgtatttagaaacaactgtgacgaatgcagttgttactgtacctgcttattttaatgattct |
7542561 |
T |
|
| Q |
211 |
caacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
|||||||| |||||||||||||| ||||| ||||||||||| ||||| |
|
|
| T |
7542560 |
caacgaaaagccactatagatgcgggtgccattgctggcctcaatgt |
7542514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 257
Target Start/End: Complemental strand, 14703937 - 14703696
Alignment:
| Q |
16 |
tggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatcttcta |
115 |
Q |
| |
|
|||||||| ||||| ||| |||| || ||||||| || |||||||||||||||||||||| ||| || ||| | | | ||| || ||| |||| |||| |
|
|
| T |
14703937 |
tggccatttaaggtcactgctggagtcgatgacaaacccatgattacggttaagtacaaggatcaggagaagaagctctatgccgaagaagtatcatcta |
14703838 |
T |
|
| Q |
116 |
tggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacg |
215 |
Q |
| |
|
|||| || ||||||||||| |||| ||| ||||| | | |||| | || |||||||| |||||||| ||||| ||||| || | ||||||||| | |
|
|
| T |
14703837 |
tggtactggtgaagatgcgagaaattgctgagacatatttagagtcaactgttaagaatgcagttgttacggtgcctgcttattttagtgattctcaaag |
14703738 |
T |
|
| Q |
216 |
aaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
||| |||||||| |||||||||| |||||| ||||| ||||| |
|
|
| T |
14703737 |
aaaagccactatggatgctggtgttattgccggcctcaatgt |
14703696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 17666356 - 17666461
Alignment:
| Q |
44 |
atgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgc |
143 |
Q |
| |
|
|||| |||||||||||| ||||| ||||||||| |||||||||| |||| || || || || ||||| ||||| || || |||||||| |||||||| |
|
|
| T |
17666356 |
atgaaaagcctatgattggtgttaactacaagggtgaagataagcaattttccgcagaagagatctcttccatggtactcacgaagatgcgtgaggttgc |
17666455 |
T |
|
| Q |
144 |
agaggc |
149 |
Q |
| |
|
||||| |
|
|
| T |
17666456 |
tgaggc |
17666461 |
T |
|
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Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 257
Target Start/End: Complemental strand, 15595569 - 15595329
Alignment:
| Q |
12 |
gttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatct |
111 |
Q |
| |
|
|||||||||||||||||| | |||||| |||||||| || ||||||| ||||| |||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
15595569 |
gttgtggccattcaaggtca---ttggtgtgaatgacaaacccatgattattgttaaatacaagggtcaagaaaagcgcttttgtgctgaggaaatatcg |
15595473 |
T |
|
| Q |
112 |
tctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctc |
211 |
Q |
| |
|
|||||| | || | |||||||||||||||||||||| | || | ||| || || || ||||| |||||||| ||||| ||||| |||| ||||||| |
|
|
| T |
15595472 |
tctatgattctcaaaaagatgcgagaggttgcagag--aaatttttagtctcccgtaaacaatgcagttgttaccgtgcctgcttatctcaatgattctc |
15595375 |
T |
|
| Q |
212 |
aacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
15595374 |
aacgaaaagccactatagatgcaggtgccattgctggccttaatgt |
15595329 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 257
Target Start/End: Original strand, 34466426 - 34466673
Alignment:
| Q |
10 |
atgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatat |
109 |
Q |
| |
|
||||| ||||||||||| |||| | ||||||||||||||||||| |||||| | ||||||| |||||||| || |||||| | |||||||||||||| | |
|
|
| T |
34466426 |
atgttatggccattcaaagttattgctggtgttaatgacaagccaatgatttcccttaagtataagggtcaggagaagcacctatgtgctgaggaaatct |
34466525 |
T |
|
| Q |
110 |
cttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattc |
209 |
Q |
| |
|
| |||||| ||||| |||||||||| || |||||||| |||| ||| |||||| | |||||||| ||| | || ||||| ||||| || || ||||| |
|
|
| T |
34466526 |
catctatgatcctttcaaagatgcgggatactgcagaggaatatttggaatcaccaattaagaatgcagttatcaccgtgcctgcttattttaatgattc |
34466625 |
T |
|
| Q |
210 |
tcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
||| ||||| || ||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
34466626 |
tcagcgaaaagctactgtggatgctggtactattgctggccttaatgt |
34466673 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 258
Target Start/End: Original strand, 4678191 - 4678439
Alignment:
| Q |
10 |
atgttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatat |
109 |
Q |
| |
|
|||||||||||||| | ||| | |||||| ||||| || || ||||||| |||||||||||||||||||| ||||| || ||| ||||||||||| |
|
|
| T |
4678191 |
atgttgtggccatttagggtcatcactggtgagaatgataaaccgatgattagtgttaagtacaagggtcaagagaagcaagttagtgttgaggaaatat |
4678290 |
T |
|
| Q |
110 |
cttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattc |
209 |
Q |
| |
|
| || ||| |||||||||||||| |||| ||||| || ||||||| || | || ||||||| ||||||||||||||| || |||||||| ||||| |
|
|
| T |
4678291 |
catcgatgatccttacaaagatgagagaagttgccgaaacatatctaacttcgtctgtgaagaatgtcgttgttactgtgcctgcatacttcaatgattc |
4678390 |
T |
|
| Q |
210 |
tcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc |
258 |
Q |
| |
|
||||||||| || || |||||||||||||| |||||||| ||||||||| |
|
|
| T |
4678391 |
tcaacgaaaagctaccatagatgctggtgccattgctggacttaatgtc |
4678439 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 257
Target Start/End: Complemental strand, 43745380 - 43745137
Alignment:
| Q |
12 |
gttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatct |
111 |
Q |
| |
|
||||||||| |||||||| | ||| || | |||||||| || ||||| | |||||||||||||| || || |||||| | ||||| || ||||| || |
|
|
| T |
43745380 |
gttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatctca |
43745281 |
T |
|
| Q |
112 |
tctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctc |
211 |
Q |
| |
|
|||||| | || ||||||||||| ||| |||||||| ||| | || | || ||||||||||| |||||||||||||||||||| ||||| |||| || |
|
|
| T |
43745280 |
tctatgattctaacaaagatgcgtgagattgcagagacatttttgcaattgcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatc |
43745181 |
T |
|
| Q |
212 |
aacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
| || || ||||| ||||||||||||| |||||||| ||| |||| |
|
|
| T |
43745180 |
agcggaaagccac--tagatgctggtgccattgctgggcttgatgt |
43745137 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 12528953 - 12528792
Alignment:
| Q |
96 |
tgctgaggaaatatcttctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggct |
195 |
Q |
| |
|
|||||| |||||||| |||||| | || || ||||||||||| ||||||| |||| ||| | |||||| || |||||||| || |||| ||||| || |
|
|
| T |
12528953 |
tgctgaagaaatatcctctatgattctatcacagatgcgagagattgcagatgcatttcttgagtcacctgttaagaatgcagtgattacggtgccagcg |
12528854 |
T |
|
| Q |
196 |
tacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
|| ||||| ||||| || ||| ||||| | |||||||||| ||||||||||| ||||| |
|
|
| T |
12528853 |
tatttcaatgattcgcagcgacgagccaccaaggatgctggtgtcattgctggcctcaatgt |
12528792 |
T |
|
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Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 257
Target Start/End: Complemental strand, 28220484 - 28220239
Alignment:
| Q |
12 |
gttgtggccattcaaggttacttctggtgttaatgacaagcctatgattacggttaagtacaagggtcaagataagcacttttgtgctgaggaaatatct |
111 |
Q |
| |
|
|||||||||||||||||| | ||| || || ||||| || |||||| | |||||||||||||| || || |||||| | ||||| || ||||| || |
|
|
| T |
28220484 |
gttgtggccattcaaggtcatttccggaacgaacgacaaacccatgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatctca |
28220385 |
T |
|
| Q |
112 |
tctatggtccttacaaagatgcgagaggttgcagaggcatatctggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctc |
211 |
Q |
| |
|
|||||||| || ||||||||||| ||| |||||||||| | | ||| | || ||||||||||| ||| |||||||||| ||||| ||||| |||| || |
|
|
| T |
28220384 |
tctatggttctaacaaagatgcgtgagattgcagaggcctttttggaatttcctgtcaagaatgcagttattactgtgcctgcttatttcaatgattatc |
28220285 |
T |
|
| Q |
212 |
aacgaaaggccactatagatgctggtgctattgctggccttaatgt |
257 |
Q |
| |
|
| || || ||||| |||||||| ||| | |||||||| || ||||| |
|
|
| T |
28220284 |
agcggaaagccaccatagatgcaggtaccattgctggtctaaatgt |
28220239 |
T |
|
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