View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9663_low_29 (Length: 221)
Name: NF9663_low_29
Description: NF9663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9663_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 4058354 - 4058519
Alignment:
| Q |
49 |
tgaagacgcaacactatgctctcatataagagatacacattcaagttctaataaactcacacaacttattacaagatcaatttaggtgactagttaaggc |
148 |
Q |
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| T |
4058354 |
tgaagaggcaacactatgctctcgtataagagatacacatacaagttctaataaactcacacaacttattccaagatcaatttaggtgactagttaaggc |
4058453 |
T |
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| Q |
149 |
agaagtaggtgacacaataacttataataataagcaattatccctaagtcaattgggaactacccc |
214 |
Q |
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| T |
4058454 |
agaagcaggtgacacagtaacttataataataaacaattatccctaagtcaattgggaactacccc |
4058519 |
T |
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