View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9663_low_8 (Length: 343)

Name: NF9663_low_8
Description: NF9663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9663_low_8
NF9663_low_8
[»] chr5 (26 HSPs)
chr5 (142-321)||(8780475-8780654)
chr5 (34-118)||(8780681-8780765)
chr5 (251-322)||(19145541-19145612)
chr5 (251-323)||(32059570-32059642)
chr5 (251-323)||(36954813-36954885)
chr5 (251-313)||(10869695-10869757)
chr5 (251-301)||(15485421-15485471)
chr5 (232-313)||(39459326-39459407)
chr5 (251-287)||(16172985-16173021)
chr5 (251-323)||(22392696-22392768)
chr5 (251-323)||(25586927-25586999)
chr5 (260-323)||(33025475-33025538)
chr5 (144-198)||(4603913-4603967)
chr5 (249-287)||(14656643-14656681)
chr5 (251-313)||(31288076-31288138)
chr5 (251-313)||(38684213-38684275)
chr5 (255-324)||(40330627-40330696)
chr5 (217-313)||(2499274-2499370)
chr5 (230-290)||(5005785-5005844)
chr5 (251-323)||(13038584-13038656)
chr5 (251-323)||(13108579-13108651)
chr5 (251-323)||(15641235-15641307)
chr5 (251-283)||(19883175-19883207)
chr5 (251-323)||(23270652-23270724)
chr5 (251-323)||(27498861-27498933)
chr5 (251-291)||(36895452-36895492)
[»] chr4 (29 HSPs)
chr4 (251-343)||(19220508-19220600)
chr4 (217-313)||(39343479-39343575)
chr4 (251-313)||(37980149-37980213)
chr4 (251-323)||(25852209-25852281)
chr4 (251-323)||(40058982-40059054)
chr4 (251-313)||(42245751-42245813)
chr4 (251-313)||(51535618-51535680)
chr4 (251-310)||(56409964-56410025)
chr4 (251-323)||(22625200-22625272)
chr4 (251-323)||(27528925-27528997)
chr4 (251-323)||(46714387-46714459)
chr4 (255-323)||(54127476-54127544)
chr4 (261-312)||(10125788-10125839)
chr4 (255-302)||(13017745-13017792)
chr4 (251-313)||(25434660-25434723)
chr4 (251-313)||(35229173-35229235)
chr4 (253-287)||(37492721-37492755)
chr4 (251-313)||(40252303-40252365)
chr4 (251-313)||(29195105-29195169)
chr4 (251-313)||(38206127-38206191)
chr4 (251-311)||(1985843-1985903)
chr4 (251-303)||(7093391-7093443)
chr4 (251-303)||(8158278-8158330)
chr4 (251-323)||(13873425-13873497)
chr4 (255-287)||(27908542-27908574)
chr4 (255-323)||(32986192-32986260)
chr4 (251-323)||(41621726-41621798)
chr4 (251-287)||(47183360-47183396)
chr4 (251-323)||(52983614-52983686)
[»] chr2 (28 HSPs)
chr2 (251-325)||(8192481-8192555)
chr2 (253-303)||(18708492-18708542)
chr2 (251-323)||(19605975-19606046)
chr2 (251-323)||(15037954-15038026)
chr2 (251-323)||(25293161-25293233)
chr2 (217-312)||(3405248-3405343)
chr2 (251-313)||(4618815-4618877)
chr2 (251-301)||(6099520-6099570)
chr2 (251-313)||(26176327-26176388)
chr2 (251-312)||(32526215-32526276)
chr2 (217-301)||(19525492-19525576)
chr2 (251-323)||(30466960-30467032)
chr2 (251-313)||(4852563-4852625)
chr2 (234-312)||(14946785-14946863)
chr2 (251-314)||(26482102-26482167)
chr2 (217-291)||(28194229-28194303)
chr2 (251-313)||(36179881-36179943)
chr2 (251-301)||(38341754-38341804)
chr2 (217-286)||(8024766-8024835)
chr2 (217-302)||(12914970-12915055)
chr2 (251-323)||(20297558-20297631)
chr2 (245-294)||(38784303-38784352)
chr2 (278-314)||(4893083-4893119)
chr2 (264-312)||(6007032-6007080)
chr2 (251-323)||(18976555-18976627)
chr2 (251-323)||(33827703-33827775)
chr2 (255-323)||(40997484-40997552)
chr2 (251-323)||(44946183-44946255)
[»] chr1 (35 HSPs)
chr1 (217-323)||(24216973-24217079)
chr1 (251-323)||(46607805-46607877)
chr1 (217-323)||(1486415-1486519)
chr1 (251-323)||(32729540-32729612)
chr1 (253-323)||(1138574-1138644)
chr1 (251-313)||(52135135-52135197)
chr1 (251-300)||(19480552-19480601)
chr1 (251-323)||(4621367-4621439)
chr1 (251-323)||(7197376-7197448)
chr1 (251-323)||(8077642-8077714)
chr1 (251-323)||(24674388-24674460)
chr1 (261-300)||(9926288-9926327)
chr1 (234-291)||(15786304-15786362)
chr1 (253-287)||(23439880-23439914)
chr1 (144-202)||(37351460-37351518)
chr1 (251-308)||(7578419-7578476)
chr1 (255-313)||(15581147-15581207)
chr1 (251-299)||(27223131-27223180)
chr1 (251-284)||(34228915-34228948)
chr1 (226-323)||(34778337-34778434)
chr1 (251-300)||(37047010-37047059)
chr1 (251-300)||(39714780-39714829)
chr1 (251-291)||(40810501-40810542)
chr1 (251-323)||(809217-809289)
chr1 (251-323)||(1378893-1378965)
chr1 (146-202)||(9500364-9500420)
chr1 (256-308)||(10059065-10059117)
chr1 (251-323)||(15059532-15059604)
chr1 (150-198)||(16899639-16899687)
chr1 (251-303)||(17935784-17935836)
chr1 (251-291)||(25237119-25237159)
chr1 (251-323)||(27454996-27455068)
chr1 (251-323)||(29057467-29057539)
chr1 (251-287)||(39964543-39964579)
chr1 (251-287)||(43983707-43983743)
[»] chr6 (25 HSPs)
chr6 (146-322)||(8479308-8479485)
chr6 (255-323)||(33499469-33499537)
chr6 (251-301)||(28741971-28742021)
chr6 (251-313)||(6691552-6691616)
chr6 (251-323)||(12591632-12591704)
chr6 (253-289)||(13564957-13564993)
chr6 (251-323)||(15360228-15360300)
chr6 (251-291)||(17149586-17149626)
chr6 (217-323)||(28672062-28672169)
chr6 (251-291)||(9208279-9208319)
chr6 (251-323)||(9238970-9239042)
chr6 (253-289)||(13569512-13569548)
chr6 (253-289)||(13574058-13574094)
chr6 (253-289)||(13576597-13576633)
chr6 (253-289)||(13579743-13579779)
chr6 (251-313)||(11448876-11448938)
chr6 (251-312)||(5360201-5360262)
chr6 (255-300)||(6384008-6384053)
chr6 (217-313)||(9843943-9844040)
chr6 (251-313)||(28028540-28028604)
chr6 (251-311)||(654276-654336)
chr6 (251-287)||(3433603-3433639)
chr6 (251-303)||(11007180-11007232)
chr6 (255-323)||(13753235-13753303)
chr6 (251-323)||(22576062-22576134)
[»] chr8 (25 HSPs)
chr8 (217-313)||(41070770-41070866)
chr8 (251-323)||(3734753-3734825)
chr8 (251-314)||(15974914-15974976)
chr8 (217-323)||(28088285-28088392)
chr8 (252-303)||(34639337-34639388)
chr8 (251-313)||(26168978-26169040)
chr8 (251-313)||(34694706-34694768)
chr8 (145-202)||(13579911-13579968)
chr8 (227-295)||(43594295-43594364)
chr8 (251-323)||(18532106-18532178)
chr8 (251-323)||(34237785-34237857)
chr8 (251-323)||(42643248-42643320)
chr8 (251-313)||(27746465-27746527)
chr8 (251-313)||(28193483-28193545)
chr8 (251-323)||(4718644-4718716)
chr8 (251-313)||(6530817-6530881)
chr8 (255-316)||(39317026-39317087)
chr8 (251-300)||(40136964-40137013)
chr8 (254-302)||(3794811-3794859)
chr8 (251-323)||(19471608-19471680)
chr8 (251-323)||(19542532-19542604)
chr8 (251-323)||(19590092-19590164)
chr8 (251-303)||(24018401-24018453)
chr8 (251-323)||(32879278-32879350)
chr8 (251-323)||(39349255-39349327)
[»] chr7 (31 HSPs)
chr7 (251-313)||(12211665-12211727)
chr7 (251-313)||(22696329-22696391)
chr7 (251-313)||(28646978-28647040)
chr7 (217-313)||(1469121-1469217)
chr7 (251-323)||(2751270-2751342)
chr7 (251-323)||(21574233-21574305)
chr7 (217-313)||(36173044-36173140)
chr7 (253-324)||(23330871-23330942)
chr7 (251-313)||(42913643-42913705)
chr7 (251-324)||(2103053-2103126)
chr7 (251-328)||(7275271-7275348)
chr7 (251-323)||(7175992-7176064)
chr7 (251-323)||(11997848-11997920)
chr7 (251-323)||(21217963-21218035)
chr7 (251-323)||(23854395-23854467)
chr7 (251-323)||(40543040-40543112)
chr7 (144-202)||(21574109-21574167)
chr7 (251-313)||(22119897-22119959)
chr7 (251-313)||(27312161-27312223)
chr7 (251-316)||(7262223-7262288)
chr7 (251-312)||(42814874-42814935)
chr7 (251-300)||(46279039-46279088)
chr7 (251-299)||(674557-674605)
chr7 (251-323)||(2344298-2344370)
chr7 (231-303)||(3347495-3347567)
chr7 (251-323)||(7799962-7800034)
chr7 (251-323)||(10091187-10091259)
chr7 (251-323)||(18044106-18044178)
chr7 (251-303)||(19421250-19421302)
chr7 (251-291)||(37693692-37693732)
chr7 (271-323)||(39145802-39145854)
[»] chr3 (41 HSPs)
chr3 (251-323)||(48977383-48977455)
chr3 (251-323)||(4252526-4252598)
chr3 (251-323)||(7485655-7485727)
chr3 (251-323)||(21362938-21363010)
chr3 (251-323)||(30257619-30257691)
chr3 (253-313)||(42799751-42799813)
chr3 (255-313)||(36660775-36660833)
chr3 (217-290)||(26158846-26158919)
chr3 (251-312)||(52821765-52821826)
chr3 (251-323)||(7470345-7470417)
chr3 (251-323)||(30807283-30807355)
chr3 (251-287)||(34844409-34844445)
chr3 (251-323)||(35492906-35492978)
chr3 (251-323)||(40133579-40133651)
chr3 (251-323)||(45529884-45529956)
chr3 (251-323)||(46576343-46576415)
chr3 (251-303)||(50162058-50162110)
chr3 (251-323)||(50582987-50583059)
chr3 (251-322)||(53424306-53424377)
chr3 (217-291)||(16140324-16140398)
chr3 (251-313)||(25379766-25379828)
chr3 (145-202)||(4252404-4252461)
chr3 (255-313)||(15034355-15034415)
chr3 (251-313)||(18316500-18316564)
chr3 (251-312)||(26174119-26174180)
chr3 (251-300)||(35623268-35623317)
chr3 (251-300)||(36803093-36803142)
chr3 (251-314)||(39253707-39253772)
chr3 (262-299)||(42430360-42430397)
chr3 (251-316)||(55371415-55371480)
chr3 (251-323)||(8456280-8456352)
chr3 (251-323)||(25289844-25289916)
chr3 (251-311)||(26108299-26108359)
chr3 (271-323)||(31537988-31538040)
chr3 (251-323)||(34492705-34492777)
chr3 (251-323)||(38732961-38733033)
chr3 (251-323)||(40940820-40940892)
chr3 (232-300)||(47079726-47079794)
chr3 (251-303)||(50731363-50731415)
chr3 (251-303)||(50781439-50781491)
chr3 (251-323)||(52455779-52455851)
[»] scaffold0576 (1 HSPs)
scaffold0576 (251-323)||(5212-5284)
[»] scaffold0160 (1 HSPs)
scaffold0160 (251-311)||(29272-29332)
[»] scaffold0068 (1 HSPs)
scaffold0068 (251-323)||(41774-41846)
[»] scaffold0070 (1 HSPs)
scaffold0070 (251-323)||(40320-40392)
[»] scaffold0199 (1 HSPs)
scaffold0199 (251-323)||(8537-8609)
[»] scaffold0026 (1 HSPs)
scaffold0026 (251-323)||(97496-97568)
[»] scaffold0623 (1 HSPs)
scaffold0623 (251-313)||(1186-1248)
[»] scaffold0459 (1 HSPs)
scaffold0459 (251-313)||(10823-10885)
[»] scaffold0366 (2 HSPs)
scaffold0366 (251-313)||(9429-9491)
scaffold0366 (251-313)||(12130-12192)
[»] scaffold0189 (1 HSPs)
scaffold0189 (251-313)||(17725-17789)
[»] scaffold0028 (1 HSPs)
scaffold0028 (251-323)||(27771-27843)


Alignment Details
Target: chr5 (Bit Score: 116; Significance: 6e-59; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 142 - 321
Target Start/End: Complemental strand, 8780654 - 8780475
Alignment:
Q  142 ttggtatccgatctaaggactgactaatccgatgagacaaatctcaccgtccacttgtgggaccccattctaggctatggacttacccatcaaaattgat 241  Q
    ||||||||||||||||||||||||||||  |||| ||  |||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||     
T  8780654 ttggtatccgatctaaggactgactaatttgatgggatcaatctcaccgtccacttgcgggaccccattctaagctatggacttacccatcgaaattgac 8780555  T
Q  242 acaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgg 321  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||| ||| |||||||| ||||    
T  8780554 acaagagacaatcgaacctgagaccttgagaggagcacactccaagatccgatgtcaaccactaggtcaacctcaaatgg 8780475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 8780765 - 8780681
Alignment:
Q  34 atcgtcaatatatcacgtcactctctctatttcattttctcttaaggtgtcaattggatttagatgtccagtaaatattctccta 118  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8780765 atcgtcaatatatcacgtcactctctctatttcgttttctcttaaggtgtcaattggatttagatgtccagtaaatattctccta 8780681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 19145541 - 19145612
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatggg 322  Q
    ||||||||| ||||||||||||||| || |||||||||||| ||||||||||| ||||||||| || |||||    
T  19145541 aatcgaaccggagaccttgagaggagcatactccaagatcccaagtcaaccactaggccaaccccaaatggg 19145612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 32059570 - 32059642
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  32059570 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 36954885 - 36954813
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||  |||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  36954885 aatcgaacctgagacctctagaggagcaaactccaagatcccaaggcaaccactaggccaaccccaaatgggt 36954813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 10869695 - 10869757
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||||||||||||||  ||||| || |||||||||||  ||||||||||||| |||||||    
T  10869695 aatcgaacctgagacctttggaggagcaaactccaagatcgcaagtcaaccaccatgccaacc 10869757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 15485421 - 15485471
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaacc 301  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||| |||||    
T  15485421 aatcgaacctgagaccttgagaggagcacactccaaggtcccaagccaacc 15485471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 39459407 - 39459326
Alignment:
Q  232 caaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||||| || | ||| |||||||||||||||||| | || | |||| ||||||||||||||||||| || | |||||||    
T  39459407 caaaattgacaccatagaaaatcgaacctgagacctttaaagaagcacattccaagatcctaagtcaactactatgccaacc 39459326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 16172985 - 16173021
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaag 287  Q
    ||||||||||||||||||||||||| |||||||||||    
T  16172985 aatcgaacctgagaccttgagaggagcacactccaag 16173021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 22392768 - 22392696
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  22392768 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 22392696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 25586999 - 25586927
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  25586999 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 25586927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 33025538 - 33025475
Alignment:
Q  260 tgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||| |||||||||| ||||||||||||||| ||| ||||| | ||||||||| || ||||||    
T  33025538 tgagatcttgagaggagcacactccaagatcccaagccaaccgcgaggccaaccccaaatgggt 33025475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 4603967 - 4603913
Alignment:
Q  144 ggtatccgatctaaggactgactaatccgatgagacaaatctcaccgtccacttg 198  Q
    ||||||||||| |||||| ||||||||||| | ||| |||| |||||||||||||    
T  4603967 ggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgtccacttg 4603913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 14656643 - 14656681
Alignment:
Q  249 acaatcgaacctgagaccttgagaggaacacactccaag 287  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  14656643 acaatcgaacctgagaccttgagaggagcaaactccaag 14656681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 31288076 - 31288138
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||| |||||||||  ||||| || |||||||||||| ||| ||||||| |||||||||    
T  31288076 aatcgaacatgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 31288138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 38684275 - 38684213
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||   ||||| || |||||||||||| |||||||||||  ||||||||    
T  38684275 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactgggccaacc 38684213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 40330696 - 40330627
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggtg 324  Q
    |||| |||||||||||||||| || |||||||||||  |||  |||||| | |||||||||| |||||||    
T  40330696 gaacttgagaccttgagaggagcaaactccaagatctcaagctaaccactaagccaacctcaaatgggtg 40330627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 313
Target Start/End: Original strand, 2499274 - 2499370
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||||| |||||| ||||||| |  |  || ||||||||||||||| |||| |||| || | |||||||||| |||||| |||| | |||||||    
T  2499274 tatggacttgcccatcgaaattgacaacagggagaatcgaacctgagactttgaaaggagcaaattccaagatcccaagtcagccactaagccaacc 2499370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 5005844 - 5005785
Alignment:
Q  230 atcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatc 290  Q
    |||| ||||||||| | | | ||| |||||||||||||||||| |||||||||||||||||    
T  5005844 atcataattgataccagaaataattgaacctgagaccttgaga-gaacacactccaagatc 5005785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 13038584 - 13038656
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||  ||||||| ||||||||| || ||||||    
T  13038584 aatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggt 13038656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 13108579 - 13108651
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||| ||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  13108579 aatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 13108651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 15641235 - 15641307
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||| |||| || ||||||    
T  15641235 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggctaaccccaaatgggt 15641307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 19883175 - 19883207
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactc 283  Q
    ||||||||||||||||||||||||| |||||||    
T  19883175 aatcgaacctgagaccttgagaggagcacactc 19883207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 23270652 - 23270724
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||| |||||||||  || || || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  23270652 aatcgaacttgagacctttggatgagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 23270724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 27498861 - 27498933
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||  |||||| || |||||||||| | ||| ||||||| ||| ||||| || ||||||    
T  27498861 aatcgaacctgagacctctagaggagcaaactccaagattccaagccaaccactaggtcaaccccaaatgggt 27498933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 36895492 - 36895452
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcc 291  Q
    |||||||| ||| |||||||||||| |||||||||||||||    
T  36895492 aatcgaacatgaaaccttgagaggagcacactccaagatcc 36895452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 19220600 - 19220508
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggtgtcaatacataaaaattaat 343  Q
    |||||||||||| |||||||||||| |||||||||||||| |||||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  19220600 aatcgaacctgaaaccttgagaggagcacactccaagatcttaagtcaaccaccatgccaacctcaaatgggtgtcagtacataaaaattaat 19220508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 39343575 - 39343479
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||||||||| || | ||| |||||||||||| || |||| |||| ||| |||||| ||||||| ||||| || || ||||||    
T  39343575 tatggacttacccatcaaaattgacaccagagagaatcgaacctgaaactttgaaaggagcacgctccaaaatcctaactcaacgactagaccaacc 39343479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 37980149 - 37980213
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaac--caccaggccaacc 313  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||| ||||  |||||||||||||    
T  37980149 aatcgaacctgagaccttgagaggagcacactccaaggtcccaagccaacatcaccaggccaacc 37980213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 25852281 - 25852209
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  25852281 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 25852209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 40058982 - 40059054
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||  |||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  40058982 aatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 40059054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 42245813 - 42245751
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||||| |||||||| |||||| || |||| ||||||| ||||||||||| |||||||||    
T  42245813 aatcgaacccgagacctttagaggagcaaactctaagatcccaagtcaaccactaggccaacc 42245751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 51535680 - 51535618
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||   ||||| || |||||||||||| ||||||||||| |||||||||    
T  51535680 aatcgaacctgagacctgtggaggagcaaactccaagatcccaagtcaaccactaggccaacc 51535618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 56410025 - 56409964
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaac--caccaggcca 310  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||| ||||  ||||||||||    
T  56410025 aatcgaacctgagaccttgagaggagcacactccaaggtcccaagccaacagcaccaggcca 56409964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 22625200 - 22625272
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   |||||  | |||||||||||| ||| ||||||| |||||||||||| ||||||    
T  22625200 aatcgaacctgagacctctggaggagtaaactccaagatcccaagccaaccactaggccaacctcaaatgggt 22625272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 27528925 - 27528997
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| | ||||||| |||||||||    
T  27528925 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccccagatgggt 27528997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 46714459 - 46714387
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  46714459 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 46714387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 54127476 - 54127544
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||  ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  54127476 gaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 54127544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 10125839 - 10125788
Alignment:
Q  261 gagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaac 312  Q
    |||| ||||||| ||||| |||||||||||| ||||||||||| ||||||||    
T  10125839 gagatcttgagacgaacaaactccaagatcccaagtcaaccactaggccaac 10125788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 13017792 - 13017745
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtcaacca 302  Q
    |||||||||||||||||||||||||||| |||||| | ||| ||||||    
T  13017792 gaacctgagaccttgagaggaacacacttcaagattccaagccaacca 13017745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 25434660 - 25434723
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtca-accaccaggccaacc 313  Q
    |||| |||||||||||||||||| | ||||||||||| ||| ||| || |||||||||||||||    
T  25434660 aatcaaacctgagaccttgagagaagcacactccaaggtcccaagccacaccaccaggccaacc 25434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 35229235 - 35229173
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||||||||    
T  35229235 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 35229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 287
Target Start/End: Original strand, 37492721 - 37492755
Alignment:
Q  253 tcgaacctgagaccttgagaggaacacactccaag 287  Q
    ||||||||||||||||||||||| |||||||||||    
T  37492721 tcgaacctgagaccttgagaggatcacactccaag 37492755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 40252365 - 40252303
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||| |||||||||||||| | ||||||||||||| | |||||||| || || ||||||    
T  40252365 aatcgaacttgagaccttgagagaagcacactccaagattccaagtcaactactagaccaacc 40252303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 29195169 - 29195105
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtca--accaccaggccaacc 313  Q
    |||||||| || ||||||||||||| ||||||||||| ||| ||| ||  |||||||||||||||    
T  29195169 aatcgaacttgcgaccttgagaggagcacactccaaggtcccaagccaacaccaccaggccaacc 29195105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 38206127 - 38206191
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtca--accaccaggccaacc 313  Q
    |||| |||||||||||||||||||| ||||||||||| ||| ||| ||  ||||||||| |||||    
T  38206127 aatcaaacctgagaccttgagaggagcacactccaaggtcccaagccagcaccaccaggtcaacc 38206191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 1985903 - 1985843
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaa 311  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||||||    
T  1985903 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 1985843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 7093443 - 7093391
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    |||||||||| | ||||||| |||| ||||||||||||||| ||| |||||||    
T  7093443 aatcgaacctaaaaccttgaaaggagcacactccaagatcccaagccaaccac 7093391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 8158330 - 8158278
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    ||||||||||||||||||||| | || | |||||||||||  |||||||||||    
T  8158330 aatcgaacctgagaccttgagggaaagatactccaagatctcaagtcaaccac 8158278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 13873425 - 13873497
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||   |||| || |||||||||||| |||  |||||| ||||||||| || ||||||    
T  13873425 aatcgaacctgagacctttgaaggagcaaactccaagatcccaagcaaaccactaggccaaccccaaatgggt 13873497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 287
Target Start/End: Complemental strand, 27908574 - 27908542
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaag 287  Q
    |||| ||||||||||||||||||||||||||||    
T  27908574 gaacttgagaccttgagaggaacacactccaag 27908542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 32986260 - 32986192
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  32986260 gaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 32986192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 41621726 - 41621798
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||| ||| |||||||||||||||| || |||||||||||  ||| ||||||  ||||||||| || ||||||    
T  41621726 aatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaaccattaggccaaccccaaatgggt 41621798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 47183396 - 47183360
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaag 287  Q
    |||||||||||||| |||||||||| |||||||||||    
T  47183396 aatcgaacctgagatcttgagaggatcacactccaag 47183360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 52983686 - 52983614
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||  ||| ||||||| ||||||||| || ||||||    
T  52983686 aatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgggt 52983614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 8192481 - 8192555
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggtgt 325  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||| || ||||||||    
T  8192481 aatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaaccccaaatgggtgt 8192555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 18708542 - 18708492
Alignment:
Q  253 tcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  18708542 tcgaacctgagaccttgagaggaacacactccaagatcccaattcaaccac 18708492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 19605975 - 19606046
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||| ||||||| ||| ||||| |||||||||    
T  19605975 aatcgaacctgagaccttgagaggagcgcactccaagatcccaagccaaccactagggcaacc-cagatgggt 19606046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 15038026 - 15037954
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || ||||||||||||  |||||||||| ||||||||| || ||||||    
T  15038026 aatcgaacctgagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaaccccaaatgggt 15037954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 25293233 - 25293161
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||||||||||| || ||||||||| ||||||    
T  25293233 aatcgaacctgagacctctcgaggagcaaactccaagatcccaagtcaaccactagaccaacctcaaatgggt 25293161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 312
Target Start/End: Original strand, 3405248 - 3405343
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaac 312  Q
    ||||||||| ||||| |||||||  || | ||  ||||||||||| |||||||||| || |||| |||||||||| ||||||||||| ||| ||||    
T  3405248 tatggacttgcccattaaaattggcaccagagggaatcgaacctgtgaccttgagatgagcacattccaagatcccaagtcaaccactaggtcaac 3405343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 4618815 - 4618877
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||| |||||||||||| || |||||||||| | ||| ||||||| |||||||||    
T  4618815 aatcgaacctgaaaccttgagaggagcatactccaagattccaagccaaccactaggccaacc 4618877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 6099520 - 6099570
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaacc 301  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||| |||||    
T  6099520 aatcgaacctgagaccttgagaggagcacactccaaggtcccaagccaacc 6099570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 26176327 - 26176388
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||| ||||||||||||||||| ||||| ||||| ||| ||||||| |||||||||||||    
T  26176327 aatcgaatctgagaccttgagaggagcacaccccaaggtcccaagtcaa-caccaggccaacc 26176388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 32526215 - 32526276
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaac 312  Q
    ||||||||||||||||||||||||| || ||| |||||||| || |||||||| | ||||||    
T  32526215 aatcgaacctgagaccttgagaggagcaaacttcaagatcccaaatcaaccactaagccaac 32526276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 19525492 - 19525576
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaacc 301  Q
    ||||||||| |||| ||||||||  || | ||  |||||||||||||| |||||||| |||||||| |||||||| ||| |||||    
T  19525492 tatggacttgcccaccaaaattggcaccagagggaatcgaacctgagatcttgagagaaacacacttcaagatcccaagccaacc 19525576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 30466960 - 30467032
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||  ||||||||| ||||||| |||| ||  ||||||| ||||||||| || ||||||    
T  30466960 aatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaaccactaggccaaccccaaatgggt 30467032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 4852625 - 4852563
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||||||||||||||  ||||| || |||||||||| | ||||||||||| ||| |||||    
T  4852625 aatcgaacctgagacctttggaggagcaaactccaagattccaagtcaaccactaggtcaacc 4852563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 14946863 - 14946785
Alignment:
Q  234 aaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaac 312  Q
    ||||||| || | ||| |||||||||| | |||||||||||| || ||| |||||||  ||||||||||| ||||||||    
T  14946863 aaattgacaccagagaaaatcgaacctaaaaccttgagaggagcaaacttcaagatctcaagtcaaccactaggccaac 14946785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 26482167 - 26482102
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtca--accaccaggccaacct 314  Q
    ||||||||||||||||||||||||| |||||||| || ||| ||| ||  |||| |||||||||||    
T  26482167 aatcgaacctgagaccttgagaggagcacactcctaggtcccaagccaacaccatcaggccaacct 26482102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 28194229 - 28194303
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcc 291  Q
    ||||||||| |||| | ||||||  || | ||| |||||||||| ||||||| |||||| |||||||||||||||    
T  28194229 tatggacttgcccaccgaaattggcaccagagagaatcgaacctaagaccttaagaggagcacactccaagatcc 28194303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 36179943 - 36179881
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||| |||||||| |||| ||| | ||||||||||||||||| || |||||| ||||||    
T  36179943 aatcgaacatgagacctcgagatgaaaaaactccaagatcctaagttaatcaccagaccaacc 36179881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 38341804 - 38341754
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaacc 301  Q
    ||||||| ||||||||||||||||| || ||| |||||||| |||||||||    
T  38341804 aatcgaatctgagaccttgagaggagcaaacttcaagatcccaagtcaacc 38341754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 8024766 - 8024835
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaa 286  Q
    |||||| ||||||||| ||||||  | |||||  |||||||| ||| |||||||||| ||||||||||||    
T  8024766 tatggatttacccatcgaaattggcataaaaggaaatcgaacttgaaaccttgagagaaacacactccaa 8024835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 302
Target Start/End: Original strand, 12914970 - 12915055
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaacca 302  Q
    |||||||||  | |||||||||||||| ||||  |||||||| |||||| ||||| | |||| ||||| ||||| |||| ||||||    
T  12914970 tatggacttgtctatcaaaattgataccaaagctaatcgaacttgagactttgagtgtaacaaactcctagatcataagccaacca 12915055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 20297631 - 20297558
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactcc-aagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||| ||||||||||||||||| |||| ||| ||||||| ||| |||||||  |||||||| || ||||||    
T  20297631 aatcgaatctgagaccttgagaggagcacattccaaagatcccaagccaaccactgggccaaccccaaatgggt 20297558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 38784303 - 38784352
Alignment:
Q  245 aaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaa 294  Q
    |||| ||||||||||| ||| |||||||||| || |||||||||||||||    
T  38784303 aaaggcaatcgaaccttagaacttgagaggagcaaactccaagatcctaa 38784352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 4893119 - 4893083
Alignment:
Q  278 acactccaagatcctaagtcaaccaccaggccaacct 314  Q
    |||||||||||||| |||||||||||||||| |||||    
T  4893119 acactccaagatcccaagtcaaccaccaggctaacct 4893083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 6007032 - 6007080
Alignment:
Q  264 accttgagaggaacacactccaagatcctaagtcaaccaccaggccaac 312  Q
    |||||||||| | ||||||||||||| | |||||||||||||| |||||    
T  6007032 accttgagagaagcacactccaagattccaagtcaaccaccagaccaac 6007080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 18976555 - 18976627
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||| ||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  18976555 aatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 18976627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 33827703 - 33827775
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| ||  ||||||||||| ||| ||||||| ||||||||| || ||||||    
T  33827703 aatcgaacctgagacctctggaggagcaatctccaagatcccaagccaaccactaggccaaccccaaatgggt 33827775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 40997484 - 40997552
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||| |||||||||  ||||| || |||||||||||| ||||||||||| || || |||||| ||||||    
T  40997484 gaacatgagacctttggaggagcaaactccaagatcccaagtcaaccactagacccacctcaaatgggt 40997552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 44946183 - 44946255
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| || |||||| || ||||||    
T  44946183 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggt 44946255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 323
Target Start/End: Complemental strand, 24217079 - 24216973
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctca 316  Q
    |||||| ||||||| | ||||||  || ||||  ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||| ||||| ||    
T  24217079 tatggatttacccaccgaaattggcaccaaaggtaatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaaccactaggtcaacccca 24216980  T
Q  317 gatgggt 323  Q
     ||||||    
T  24216979 aatgggt 24216973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 46607877 - 46607805
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||||||||||| ||||||||| || ||||||    
T  46607877 aatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggt 46607805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 323
Target Start/End: Complemental strand, 1486519 - 1486415
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctca 316  Q
    |||||||||||||||| ||||||  || ||||  ||||||||||||||||||||||| |   ||||||||||||| ||| ||||||| ||| ||||| ||    
T  1486519 tatggacttacccatcgaaattggcaccaaagggaatcgaacctgagaccttgagagta--gcactccaagatcccaagccaaccactaggtcaacccca 1486422  T
Q  317 gatgggt 323  Q
     ||||||    
T  1486421 aatgggt 1486415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 32729612 - 32729540
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||| ||||||||| || |||| ||||||| ||| ||||||| ||||||||| || ||||||    
T  32729612 aatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgggt 32729540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 1138644 - 1138574
Alignment:
Q  253 tcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||| |||||||||||||| ||||||||||||||  ||| ||||||| ||| ||||| || ||||||    
T  1138644 tcgaacctaagaccttgagaggagcacactccaagatctcaagccaaccactaggtcaaccccaaatgggt 1138574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 52135197 - 52135135
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||||||||||| |||||| || || |||||||||||| ||||||||||| || ||||||    
T  52135197 aatcgaacctgagacattgagatgagcaaactccaagatcccaagtcaaccactagaccaacc 52135135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 19480601 - 19480552
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaac 300  Q
    |||||||  |||||||||||||||| ||||||||||||||| ||||||||    
T  19480601 aatcgaatgtgagaccttgagaggagcacactccaagatcccaagtcaac 19480552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 4621367 - 4621439
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  4621367 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 4621439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 7197376 - 7197448
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  7197376 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 7197448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 8077714 - 8077642
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  8077714 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 8077642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 24674460 - 24674388
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  24674460 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 24674388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 9926288 - 9926327
Alignment:
Q  261 gagaccttgagaggaacacactccaagatcctaagtcaac 300  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  9926288 gagaccttgagaggagcacactccaagatcccaagtcaac 9926327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 291
Target Start/End: Original strand, 15786304 - 15786362
Alignment:
Q  234 aaattgatacaaaagacaatcgaacctgagaccttga-gaggaacacactccaagatcc 291  Q
    ||||||| || ||||| |||||||||||||||||||| ||||| |||||||| ||||||    
T  15786304 aaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcc 15786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 287
Target Start/End: Original strand, 23439880 - 23439914
Alignment:
Q  253 tcgaacctgagaccttgagaggaacacactccaag 287  Q
    ||||||||||||| |||||||||||||||||||||    
T  23439880 tcgaacctgagacattgagaggaacacactccaag 23439914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 37351460 - 37351518
Alignment:
Q  144 ggtatccgatctaaggactgactaatccgatgagacaaatctcaccgtccacttgtggg 202  Q
    ||||||||||| |||||| ||||||||||| | ||| |||| ||||| |||||||||||    
T  37351460 ggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgtggg 37351518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 7578476 - 7578419
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggc 308  Q
    |||||||||||||||||   |||||||| |||||||||||| ||| ||||||| ||||    
T  7578476 aatcgaacctgagacctctggaggaacaaactccaagatcccaagccaaccactaggc 7578419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 15581147 - 15581207
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtca--accaccaggccaacc 313  Q
    |||||||||||||| |||||| ||||||||||| ||| ||| ||  |||||||||||||||    
T  15581147 gaacctgagacctttagaggagcacactccaaggtcccaagccaacaccaccaggccaacc 15581207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 27223131 - 27223180
Alignment:
Q  251 aatcgaacctgagaccttg-agaggaacacactccaagatcctaagtcaa 299  Q
    ||||||||||||||||||| ||| || |||||||| ||||||||||||||    
T  27223131 aatcgaacctgagaccttgaagaagagcacactcccagatcctaagtcaa 27223180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 284
Target Start/End: Complemental strand, 34228948 - 34228915
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactcc 284  Q
    |||| |||||||||||||||||||||||||||||    
T  34228948 aatccaacctgagaccttgagaggaacacactcc 34228915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 323
Target Start/End: Complemental strand, 34778434 - 34778337
Alignment:
Q  226 acccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||| |||||||| ||| | ||  |||| ||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  34778434 acccaccaaaattggtaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 34778337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 37047059 - 37047010
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaac 300  Q
    |||| |||||||||||||||||||| ||||||||||| ||| ||| ||||    
T  37047059 aatcaaacctgagaccttgagaggagcacactccaaggtcccaagccaac 37047010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 39714780 - 39714829
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaac 300  Q
    |||| ||| |||||||||||||||| ||||||||||||||| ||| ||||    
T  39714780 aatcaaacttgagaccttgagaggagcacactccaagatcccaagccaac 39714829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 40810542 - 40810501
Alignment:
Q  251 aatcgaacctgagaccttg-agaggaacacactccaagatcc 291  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  40810542 aatcgaacctgagaccttgaagaggaacacactcccagatcc 40810501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 809289 - 809217
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||| ||||||||||||| ||||||  | |||||||||||| ||  ||||||| |||||||||  ||||||||    
T  809289 aatcaaacctgagaccttaagaggagtaaactccaagatcccaaaccaaccacgaggccaaccctagatgggt 809217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 1378965 - 1378893
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||| |||||| ||  ||||| || |||||||||||| ||||||||||| | |||||||| | ||||||    
T  1378965 aatcgaacatgagacttttggaggagcaaactccaagatcccaagtcaaccactaagccaaccttaaatgggt 1378893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 9500364 - 9500420
Alignment:
Q  146 tatccgatctaaggactgactaatccgatgagacaaatctcaccgtccacttgtggg 202  Q
    ||||||||| ||| |  ||||||||||| ||||| |||||||||| |||||||||||    
T  9500364 tatccgatccaagaatcgactaatccgaagagaccaatctcaccgcccacttgtggg 9500420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 10059117 - 10059065
Alignment:
Q  256 aacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggc 308  Q
    |||||||||| ||||||||| || |||||||||||  ||||||||||| ||||    
T  10059117 aacctgagactttgagaggagcaaactccaagatctcaagtcaaccactaggc 10059065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 15059532 - 15059604
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||| | ||| ||||||| ||||||||| || ||||||    
T  15059532 aatcgaacctgagacctctggaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgggt 15059604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 16899687 - 16899639
Alignment:
Q  150 cgatctaaggactgactaatccgatgagacaaatctcaccgtccacttg 198  Q
    ||||| |||||| ||||||||||| | ||| ||||||||||||||||||    
T  16899687 cgatccaaggaccgactaatccgaggggaccaatctcaccgtccacttg 16899639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 17935836 - 17935784
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    |||||||||||||||||   ||||| || |||||||||||| |||||||||||    
T  17935836 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccac 17935784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 25237119 - 25237159
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcc 291  Q
    ||||||||||||||||||||||| | || ||||||||||||    
T  25237119 aatcgaacctgagaccttgagagaagcaaactccaagatcc 25237159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 27454996 - 27455068
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| || |||||| || ||||||    
T  27454996 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggt 27455068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 29057467 - 29057539
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||| | || |||||||||||| ||  ||||||| ||||||||| || ||||||    
T  29057467 aatcgaacctgagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggt 29057539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 39964579 - 39964543
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaag 287  Q
    |||| |||||||||||||||||||| |||||||||||    
T  39964579 aatcaaacctgagaccttgagaggagcacactccaag 39964543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 43983707 - 43983743
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaag 287  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  43983707 aatcgtacctgaaaccttgagaggaacacactccaag 43983743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 322
Target Start/End: Complemental strand, 8479485 - 8479308
Alignment:
Q  146 tatccgatctaaggactgactaatccgatgagacaaatctcaccgtccacttgtg-ggaccccattctaggctatggacttacccatcaaaattgataca 244  Q
    |||||||||||||||  |||||||| || | ||| ||||||| || ||||||||| || | || || || || |||||||| |||| | ||||||| ||     
T  8479485 tatccgatctaaggaacgactaatctgaggggaccaatctcatcgcccacttgtgagggctccgttttaagccatggacttgcccaccgaaattgacacc 8479386  T
Q  245 aaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatggg 322  Q
    | ||  |||||||||||| | ||| |||||| ||||||||||||||| ||||||||||| ||||||||| || |||||    
T  8479385 agaggaaatcgaacctgaaatcttaagaggagcacactccaagatcccaagtcaaccactaggccaaccccaaatggg 8479308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 33499537 - 33499469
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||||| || |||||||||||| ||| ||||||||||||||||| || ||||||    
T  33499537 gaacctgagaccttgagaggagcaaactccaagatcccaagccaaccaccaggccaaccccaaatgggt 33499469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 28741971 - 28742021
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaacc 301  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |||||||    
T  28741971 aatcgaacctgagaccttgagaggagcacactccaagatcccaggtcaacc 28742021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 6691552 - 6691616
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtca--accaccaggccaacc 313  Q
    ||||||||||||||||||||||||| ||||||||||| ||  ||||||  |||||||||||||||    
T  6691552 aatcgaacctgagaccttgagaggagcacactccaaggtctaaagtcaacaccaccaggccaacc 6691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 12591704 - 12591632
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  12591704 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 12591632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 13564993 - 13564957
Alignment:
Q  253 tcgaacctgagaccttgagaggaacacactccaagat 289  Q
    |||||||||||||||||||||||||||||||||||||    
T  13564993 tcgaacctgagaccttgagaggaacacactccaagat 13564957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 15360228 - 15360300
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  15360228 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 15360300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 17149586 - 17149626
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcc 291  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  17149586 aatcgaacctgagaccttgagaggagcacactccaagatcc 17149626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 323
Target Start/End: Complemental strand, 28672169 - 28672062
Alignment:
Q  217 tatggactta-cccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctc 315  Q
    |||||||||| |||| ||||||||| || | ||  |||||||||| ||||||  |||||| || |||||||||||  ||||||||||| ||||||||| |    
T  28672169 tatggacttagcccaccaaaattgacaccagagggaatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaaccactaggccaacccc 28672070  T
Q  316 agatgggt 323  Q
    | ||||||    
T  28672069 aaatgggt 28672062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 9208319 - 9208279
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcc 291  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  9208319 aatcgaacctgagaccttgagaggagcaaactccaagatcc 9208279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 9239042 - 9238970
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  9239042 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 9238970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 13569548 - 13569512
Alignment:
Q  253 tcgaacctgagaccttgagaggaacacactccaagat 289  Q
    |||||||||||||||||||||||||| ||||||||||    
T  13569548 tcgaacctgagaccttgagaggaacaaactccaagat 13569512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 13574094 - 13574058
Alignment:
Q  253 tcgaacctgagaccttgagaggaacacactccaagat 289  Q
    ||||||||||||||||||||||||||||||| |||||    
T  13574094 tcgaacctgagaccttgagaggaacacactctaagat 13574058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 13576633 - 13576597
Alignment:
Q  253 tcgaacctgagaccttgagaggaacacactccaagat 289  Q
    ||||||||||||||||||||||||||||||| |||||    
T  13576633 tcgaacctgagaccttgagaggaacacactctaagat 13576597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 13579779 - 13579743
Alignment:
Q  253 tcgaacctgagaccttgagaggaacacactccaagat 289  Q
    ||||||| |||||||||||||||||||||||||||||    
T  13579779 tcgaaccggagaccttgagaggaacacactccaagat 13579743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 11448938 - 11448876
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||||||||    
T  11448938 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 11448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 5360201 - 5360262
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaac 312  Q
    |||||||||||||||||   ||| | || |||||||||||| ||| ||||||||||||||||    
T  5360201 aatcgaacctgagacctcttgagaagcaaactccaagatcccaagccaaccaccaggccaac 5360262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 6384008 - 6384053
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtcaac 300  Q
    ||||||||||||||||||||| ||||||||||| ||| ||| ||||    
T  6384008 gaacctgagaccttgagaggagcacactccaaggtcccaagccaac 6384053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 9844040 - 9843943
Alignment:
Q  217 tatggactta-cccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||| |||| ||||||||| || | ||  | |||||||||||||||  |||||| || |||||||||||| ||| ||||||| || ||||||    
T  9844040 tatggacttaacccaccaaaattgacaccagaggaagtcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagaccaacc 9843943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 28028604 - 28028540
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtca--accaccaggccaacc 313  Q
    |||||||| |||||||||||||||| | ||||| ||| ||| ||||||  |||||||||||||||    
T  28028604 aatcgaacatgagaccttgagaggagctcactcaaaggtcccaagtcaacaccaccaggccaacc 28028540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 654276 - 654336
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaa 311  Q
    |||||||||||||||||   ||||| || |||||||||||| |||||| |||| |||||||    
T  654276 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcagccactaggccaa 654336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 3433603 - 3433639
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaag 287  Q
    ||||||||||||||||||||||||| || ||||||||    
T  3433603 aatcgaacctgagaccttgagaggagcaaactccaag 3433639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 11007232 - 11007180
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||| |||||||    
T  11007232 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccac 11007180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 13753303 - 13753235
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  13753303 gaacctgagacctctggaggagcaaactccaagatccaaagccaaccactaggccaaccccaaatgggt 13753235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 22576134 - 22576062
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||| |||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  22576134 aatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 22576062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 41070866 - 41070770
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||| |||| |||| | ||||||| || ||||  |||||||| |||||||||||||| | ||||||||||||||| ||||||||||| |||||||||    
T  41070866 tatgaacttgcccaccgaaattgacaccaaagggaatcgaacttgagaccttgagagtagcacactccaagatcccaagtcaaccactaggccaacc 41070770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 3734753 - 3734825
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  3734753 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 3734825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 15974976 - 15974914
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacct 314  Q
    |||||||| |||||||||||||||| || |||||||||||| |||| |||||| ||||||||||    
T  15974976 aatcgaacttgagaccttgagaggagcatactccaagatcccaagt-aaccactaggccaacct 15974914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 323
Target Start/End: Complemental strand, 28088392 - 28088285
Alignment:
Q  217 tatggactta-cccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctc 315  Q
    |||||||||| |||| | ||||||| || ||||  ||||||| |||||||||   || ||||| |||||||||||| ||||||||||| | ||||||| |    
T  28088392 tatggacttaacccaccgaaattgacaccaaagggaatcgaatctgagacctctggatgaacaaactccaagatcccaagtcaaccactaagccaacccc 28088293  T
Q  316 agatgggt 323  Q
    ||||||||    
T  28088292 agatgggt 28088285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 34639337 - 34639388
Alignment:
Q  252 atcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||| |||||||    
T  34639337 atcgagcctgagaccttgagaggagcacactccaagatcccaagccaaccac 34639388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 26168978 - 26169040
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||| |||||||||||||||||||| || |||||||||||| |||  |||||| |||||||||    
T  26168978 aatcaaacctgagaccttgagaggagcaaactccaagatcccaagcaaaccactaggccaacc 26169040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 34694706 - 34694768
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||| |||||||||||||| || |||||||||||  ||||||||||| || ||||||    
T  34694706 aatcgaacctaagaccttgagaggagcaaactccaagatcacaagtcaaccactagaccaacc 34694768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 13579911 - 13579968
Alignment:
Q  145 gtatccgatctaaggactgactaatccgatgagacaaatctcaccgtccacttgtggg 202  Q
    |||||||||||||||||  | ||||||||||  || ||||||||||||||||||||||    
T  13579911 gtatccgatctaaggaccaattaatccgatggaaccaatctcaccgtccacttgtggg 13579968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 43594295 - 43594364
Alignment:
Q  227 cccatcaaaattgatacaaaagacaatcgaacctgagaccttga-gaggaacacactccaagatcctaag 295  Q
    |||||| ||||||| || | ||| |||||||||||||||||||| |||||||||| ||| ||||||||||    
T  43594295 cccatccaaattgacactagagagaatcgaacctgagaccttgaggaggaacacattcctagatcctaag 43594364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 18532178 - 18532106
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  18532178 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 18532106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 34237785 - 34237857
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  34237785 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 34237857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 42643248 - 42643320
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||| |||||||||   ||||| || |||||||||||| ||||||||||| ||||||||| || ||||||    
T  42643248 aatcgaatctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggt 42643320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 27746465 - 27746527
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||  ||||||| |||||||||    
T  27746465 aatcgaacctgagacctttggaggagcaaactccaagatcccaaaccaaccactaggccaacc 27746527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 28193545 - 28193483
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||||||||    
T  28193545 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 28193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 4718716 - 4718644
Alignment:
Q  251 aatcgaacctgagacct-tgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||| ||| |||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  4718716 aatcgaacctgagacctctga-aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 4718644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 6530881 - 6530817
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtca--accaccaggccaacc 313  Q
    ||||||||||||||| ||||||||| |||||||| || ||| ||| ||  |||||||||||||||    
T  6530881 aatcgaacctgagacattgagaggagcacactcctaggtcccaagccaacaccaccaggccaacc 6530817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 39317087 - 39317026
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctca 316  Q
    |||||||||| |||||||| | |||||||||| |||  ||||||||||| || |||||||||    
T  39317087 gaacctgagagcttgagagaagcacactccaatatctcaagtcaaccactagaccaacctca 39317026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 40136964 - 40137013
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaac 300  Q
    |||| |||||||||||||||||||| ||||||||||| ||| ||| ||||    
T  40136964 aatcaaacctgagaccttgagaggagcacactccaaggtcccaagccaac 40137013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 3794859 - 3794811
Alignment:
Q  254 cgaacctgagaccttgagaggaacacactccaagatcctaagtcaacca 302  Q
    ||||| |||||||||||||||| || ||| |||||||||||| ||||||    
T  3794859 cgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 3794811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 19471680 - 19471608
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||| ||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  19471680 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19471608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 19542604 - 19542532
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||| ||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  19542604 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19542532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 19590092 - 19590164
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||| ||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  19590092 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19590164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 24018453 - 24018401
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    |||||||||| |||||||  ||||| || |||||||||||| |||||||||||    
T  24018453 aatcgaacctcagacctttggaggagcaaactccaagatcccaagtcaaccac 24018401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 32879350 - 32879278
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||| ||||||| ||||||||||| || |||||| || ||||||    
T  32879350 aatcgaacctgagacctctggaggaccaaactcgaagatcccaagtcaaccactagaccaaccccaaatgggt 32879278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 39349327 - 39349255
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| |||||||  |||||||| || ||||||    
T  39349327 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactgggccaaccccaaatgggt 39349255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 12211665 - 12211727
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||| ||||||||| |||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  12211665 aatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaacc 12211727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 22696391 - 22696329
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||| |||||||||||||||||||| ||||||||||||||| || |||||||| |||||||||    
T  22696391 aatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaacc 22696329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 28647040 - 28646978
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||||||| ||| |||||||||    
T  28647040 aatcgaacctgagaccttgagagaagcacactccaagatcccaagtcaatcactaggccaacc 28646978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 1469217 - 1469121
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||||| |||||| ||||||  |  ||||  |||||||||||||||||||||| ||||| ||||||||||   ||||||||||| |||||||||    
T  1469217 tatggacttgcccatcgaaattggcattaaaggaaatcgaacctgagaccttgagatgaacaaactccaagatttcaagtcaaccactaggccaacc 1469121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 2751342 - 2751270
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  2751342 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 2751270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 21574233 - 21574305
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||| ||||||||||||| |||||||||| |||| ||  ||||||| ||||||||| || ||||||    
T  21574233 aatcgaacctgtgaccttgagaggagcacactccaaaatcccaaaccaaccactaggccaaccccaaatgggt 21574305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 36173140 - 36173044
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||||| |||| ||||||||  |||| ||  |||||||||||| ||||||||| ||||| ||||||| |||| ||||||| ||  |||||||||    
T  36173140 tatggacttgcccaccaaaattggcacaagagggaatcgaacctgaaaccttgagatgaacaaactccaaaatcccaagtcaatcataaggccaacc 36173044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 23330871 - 23330942
Alignment:
Q  253 tcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggtg 324  Q
    ||||||||||||||||||||||| ||||||| || |||| ||| ||||||| |||| |||| || |||||||    
T  23330871 tcgaacctgagaccttgagaggagcacactctaaaatcccaagccaaccactaggctaaccccaaatgggtg 23330942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 42913643 - 42913705
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||  |||||| || |||||||||||| ||| ||||||| |||||||||    
T  42913643 aatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaacc 42913705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 2103126 - 2103053
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggtg 324  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || |||||||    
T  2103126 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtg 2103053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 328
Target Start/End: Complemental strand, 7275348 - 7275271
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggtgtcaa 328  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || |||||| ||||    
T  7275348 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtttcaa 7275271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 7175992 - 7176064
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  7175992 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 7176064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 11997920 - 11997848
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||  |||||| || |||||||||||| ||| ||||||| || |||||| || ||||||    
T  11997920 aatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagcccaaccacaaatgggt 11997848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 21217963 - 21218035
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  21217963 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 21218035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 23854467 - 23854395
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  23854467 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 23854395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 40543040 - 40543112
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  40543040 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 40543112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 21574109 - 21574167
Alignment:
Q  144 ggtatccgatctaaggactgactaatccgatgagacaaatctcaccgtccacttgtggg 202  Q
    ||||||||||| |||||| ||||||||||| | ||| |||||||||| | |||||||||    
T  21574109 ggtatccgatccaaggaccgactaatccgaggggaccaatctcaccgcctacttgtggg 21574167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 22119959 - 22119897
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||||||||    
T  22119959 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 22119897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 27312223 - 27312161
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||| ||||  |||||| || |||||||||||| ||| ||||||| |||||||||    
T  27312223 aatcgaacctgaaacctctagaggagcaaactccaagatcccaagccaaccactaggccaacc 27312161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 316
Target Start/End: Complemental strand, 7262288 - 7262223
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctca 316  Q
    |||| ||| |||||||||||||||| |||||| |||||||  ||||||||||| | | ||||||||    
T  7262288 aatcaaacttgagaccttgagaggatcacactacaagatcacaagtcaaccactaagtcaacctca 7262223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 42814935 - 42814874
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaac 312  Q
    ||||||||||||||| |  |||||| || |||||||||||| ||||||||||| | ||||||    
T  42814935 aatcgaacctgagacttcaagaggagcaaactccaagatcccaagtcaaccactaagccaac 42814874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 46279088 - 46279039
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaac 300  Q
    |||| |||| ||||||||||||||| ||||||||||| ||| ||||||||    
T  46279088 aatcaaaccggagaccttgagaggagcacactccaaggtccaaagtcaac 46279039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 674557 - 674605
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaa 299  Q
    |||||||| |||||||||||||||| |||||||||| |||  |||||||    
T  674557 aatcgaacttgagaccttgagaggagcacactccaaaatctcaagtcaa 674605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 2344370 - 2344298
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||| |||||| |||  ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  2344370 aatcgaatctgagagctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 2344298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 3347567 - 3347495
Alignment:
Q  231 tcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    |||||||||| |||| ||| |||| || |||||||| |||||| ||| |||| |||||||  |||||||||||    
T  3347567 tcaaaattgacacaagagaaaatccaatctgagaccgtgagagaaacgcacttcaagatctcaagtcaaccac 3347495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 7799962 - 7800034
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||| ||||| || ||||||    
T  7799962 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccccaaatgggt 7800034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 10091259 - 10091187
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| || |||||| || ||||||    
T  10091259 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggt 10091187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 18044178 - 18044106
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||| |||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  18044178 aatcgaacctgggacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 18044106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 19421302 - 19421250
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    |||||||||||||||||  |||||| || |||||||||||| ||| |||||||    
T  19421302 aatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccac 19421250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 37693692 - 37693732
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcc 291  Q
    ||||||||||||||| || |||||| |||||||||||||||    
T  37693692 aatcgaacctgagacattaagaggagcacactccaagatcc 37693732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 39145802 - 39145854
Alignment:
Q  271 gaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||| || |||||||||||| ||||||||||| ||| |||||||| ||||||    
T  39145802 gaggagcaaactccaagatcccaagtcaaccactaggtcaacctcaaatgggt 39145854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 48977455 - 48977383
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||||||||||| ||||||||| || ||||||    
T  48977455 aatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggt 48977383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 4252526 - 4252598
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||| ||| |||||||||||||||| ||||||||||||||  ||| ||||||| ||||||||| || ||||||    
T  4252526 aatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaaccccaaatgggt 4252598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 7485655 - 7485727
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||||||||||| | ||||||| || ||||||    
T  7485655 aatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactatgccaaccccaaatgggt 7485727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 21363010 - 21362938
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||||||||||| ||||||||| || ||||||    
T  21363010 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggt 21362938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 30257691 - 30257619
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  30257691 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 30257619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 42799751 - 42799813
Alignment:
Q  253 tcgaacctgagaccttgagaggaacacactccaagatcctaagtca--accaccaggccaacc 313  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||| ||  |||||||||||||||    
T  42799751 tcgaacctgagaccttgagaggagcacactccaaggtcccaagccaacaccaccaggccaacc 42799813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 36660833 - 36660775
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    ||||||||||||||||||||| || |||||||||||||||  ||||||| ||| |||||    
T  36660833 gaacctgagaccttgagaggagcaaactccaagatcctaaaccaaccactaggtcaacc 36660775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 26158919 - 26158846
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatc 290  Q
    |||||||||||||| | ||||||  || ||||  |||  |||||||||||||||||||| ||||||||||||||    
T  26158919 tatggacttacccaccgaaattggcaccaaagggaatgaaacctgagaccttgagaggagcacactccaagatc 26158846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 52821765 - 52821826
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaac 312  Q
    |||||||||||||||||   ||||| || |||||||||||| ||||||||||| ||||||||    
T  52821765 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaac 52821826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 7470345 - 7470417
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||  ||||||||||| |||| |||| || ||||||    
T  7470345 aatcgaacctgagacctttggaggagcaaactccaagatctcaagtcaaccactaggcaaaccccaaatgggt 7470417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 30807283 - 30807355
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  30807283 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 30807355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 34844445 - 34844409
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaag 287  Q
    ||||||||||||||||||||||||| |||||||||||    
T  34844445 aatcgaacctgagaccttgagaggagcacactccaag 34844409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 35492978 - 35492906
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  35492978 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 35492906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 40133579 - 40133651
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || ||||||| |||| ||| ||||||| ||||||||| || ||||||    
T  40133579 aatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaaccccaaatgggt 40133651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 45529884 - 45529956
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  45529884 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 45529956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 46576415 - 46576343
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  46576415 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 46576343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 50162110 - 50162058
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    ||||||| ||||||||||||||||| | |||| |||||||| |||||||||||    
T  50162110 aatcgaatctgagaccttgagaggagcgcacttcaagatcccaagtcaaccac 50162058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 50583059 - 50582987
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||| ||||| |||||| || |||||||||||| ||  ||||||| ||||||||| || ||||||    
T  50583059 aatcgaacctgaaaccttaagaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggt 50582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 53424306 - 53424377
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatggg 322  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || |||||    
T  53424306 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggg 53424377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 16140398 - 16140324
Alignment:
Q  217 tatggacttacccatcaaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcc 291  Q
    ||||||||| |||| ||||||||| || | ||| |||||||| |||||| ||||||||| ||  |||||||||||    
T  16140398 tatggacttgcccaccaaaattgacactagagaaaatcgaacatgagactttgagaggagcaagctccaagatcc 16140324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 25379828 - 25379766
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||||||||    
T  25379828 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 25379766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 4252404 - 4252461
Alignment:
Q  145 gtatccgatctaaggactgactaatccgatgagacaaatctcaccgtccacttgtggg 202  Q
    |||||||||| |||||  ||||||||||| | ||| |||| |||||||||||||||||    
T  4252404 gtatccgatccaaggatcgactaatccgaggggaccaatcccaccgtccacttgtggg 4252461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 15034415 - 15034355
Alignment:
Q  255 gaacctgagaccttgagaggaacacactccaagatcctaagtca--accaccaggccaacc 313  Q
    ||||||||||||||||||||| ||| ||||||| ||| ||| ||  |||||||||||||||    
T  15034415 gaacctgagaccttgagaggatcaccctccaaggtcccaaggcaacaccaccaggccaacc 15034355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 18316500 - 18316564
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtca--accaccaggccaacc 313  Q
    |||||||||| |||||||||||||| ||||||||||| ||| ||| ||  |||||||| ||||||    
T  18316500 aatcgaacctaagaccttgagaggagcacactccaaggtcccaagccagcaccaccagaccaacc 18316564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 26174180 - 26174119
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaac 312  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||    
T  26174180 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaac 26174119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 35623268 - 35623317
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaac 300  Q
    |||||||| |||||||||||||||| ||||||||||| ||| ||| ||||    
T  35623268 aatcgaacatgagaccttgagaggagcacactccaaggtcccaagccaac 35623317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 36803093 - 36803142
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaac 300  Q
    |||||||| |||||| ||||||||| ||||||||||||| ||||| ||||    
T  36803093 aatcgaacttgagactttgagaggagcacactccaagattctaagccaac 36803142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 39253772 - 39253707
Alignment:
Q  251 aatcgaacctgagaccttg-agaggaacacactccaagatcctaagtc-aaccaccaggccaacct 314  Q
    ||||||||||||||||||| |||||| |||||||| |||||| ||||| |||||| ||| ||||||    
T  39253772 aatcgaacctgagaccttgaagaggagcacactcccagatcccaagtctaaccactaggtcaacct 39253707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 299
Target Start/End: Complemental strand, 42430397 - 42430360
Alignment:
Q  262 agaccttgagaggaacacactccaagatcctaagtcaa 299  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  42430397 agaccttgagaggagcacactccaagatcccaagtcaa 42430360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 55371415 - 55371480
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctca 316  Q
    |||||||| |||||||||||||| | || ||||||| |||  ||| ||||||| ||||||||||||    
T  55371415 aatcgaacatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaacctca 55371480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 8456280 - 8456352
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||| ||||||| ||| ||||||| ||||||||| || ||||||    
T  8456280 aatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgggt 8456352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 25289844 - 25289916
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| || |||||| || ||||||    
T  25289844 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggt 25289916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 26108359 - 26108299
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaa 311  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||||||    
T  26108359 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 26108299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 31537988 - 31538040
Alignment:
Q  271 gaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||| || |||||||||||||||| ||||||| ||||||||| || ||||||    
T  31537988 gaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggt 31538040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 34492705 - 34492777
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||| ||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  34492705 aatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 34492777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 38733033 - 38732961
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||| |||||||||||   |||||||| |||||||||| | ||||||||||  || ||||||||| ||||||    
T  38733033 aatcggacctgagacctctggaggaacaaactccaagattccaagtcaaccattagcccaacctcaaatgggt 38732961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 40940892 - 40940820
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| || |||||| || ||||||    
T  40940892 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggt 40940820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 47079794 - 47079726
Alignment:
Q  232 caaaattgatacaaaagacaatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaac 300  Q
    |||||||| ||| || || |||| ||||| ||||||| ||||||||||| |||||||||| ||| ||||    
T  47079794 caaaattggtaccaaggagaatcaaacctaagaccttaagaggaacacattccaagatcccaagccaac 47079726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 50731363 - 50731415
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    |||| ||| |||||||||||||||| |||||| |||||||  |||||||||||    
T  50731363 aatcaaacttgagaccttgagaggagcacacttcaagatctcaagtcaaccac 50731415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 50781491 - 50781439
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccac 303  Q
    |||| ||| |||||||||||||||| |||||| |||||||  |||||||||||    
T  50781491 aatcaaacttgagaccttgagaggagcacacttcaagatctcaagtcaaccac 50781439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 52455779 - 52455851
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || ||||||||||||  || ||||||| ||||||||| || ||||||    
T  52455779 aatcgaacctgagacctctggaggagcaaactccaagatccctagccaaccactaggccaaccccaaatgggt 52455851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 5212 - 5284
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  5212 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 5284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 29272 - 29332
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaa 311  Q
    |||||||||| ||||||||||||||||||||| |||||| | ||| ||||||| |||||||    
T  29272 aatcgaacctaagaccttgagaggaacacacttcaagattccaagccaaccactaggccaa 29332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 41774 - 41846
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||||||||||| ||||||||| || ||||||    
T  41774 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggt 41846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 40392 - 40320
Alignment:
Q  251 aatcgaacctgagacct-tgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||| ||| |||| || |||||||||||||||| ||||||| ||||||||| || ||||||    
T  40392 aatcgaacctgagacctctga-aggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggt 40320  T

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Target: scaffold0199 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 8537 - 8609
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| ||||||||| || ||||||    
T  8537 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 8609  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 97496 - 97568
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||||||||||||  ||||| || ||| |||||||| ||| ||||||| ||||||||| || ||||||    
T  97496 aatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaatgggt 97568  T

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Target: scaffold0623 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 1186 - 1248
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||||||||    
T  1186 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 1248  T

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Target: scaffold0459 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 10823 - 10885
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||||||||    
T  10823 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 10885  T

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Target: scaffold0366 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 9429 - 9491
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||||||||    
T  9429 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 9491  T

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Target: scaffold0366; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 12130 - 12192
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacc 313  Q
    |||||||||||||||||   ||||| || |||||||||||| ||| ||||||| |||||||||    
T  12130 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 12192  T

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Target: scaffold0189 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 17725 - 17789
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtca--accaccaggccaacc 313  Q
    |||||||||||||||||||||||||  |||||||||| || || | ||  |||||||||||||||    
T  17725 aatcgaacctgagaccttgagaggagaacactccaaggtcttacgccaataccaccaggccaacc 17789  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 27843 - 27771
Alignment:
Q  251 aatcgaacctgagaccttgagaggaacacactccaagatcctaagtcaaccaccaggccaacctcagatgggt 323  Q
    ||||||||| ||||||||||||||| || ||||||| |||| ||  ||||||| || |||||| || ||||||    
T  27843 aatcgaacccgagaccttgagaggagcaaactccaaaatcccaaaccaaccactagaccaaccccaaatgggt 27771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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