View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9666_high_1 (Length: 596)

Name: NF9666_high_1
Description: NF9666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9666_high_1
NF9666_high_1
[»] chr5 (16 HSPs)
chr5 (25-580)||(39082904-39083447)
chr5 (25-110)||(28290101-28290187)
chr5 (25-110)||(8419077-8419163)
chr5 (25-110)||(18149736-18149822)
chr5 (25-110)||(15029766-15029852)
chr5 (25-110)||(19291359-19291445)
chr5 (38-110)||(14340401-14340474)
chr5 (25-110)||(15115549-15115635)
chr5 (25-110)||(21370689-21370775)
chr5 (28-109)||(38900648-38900730)
chr5 (25-110)||(38901097-38901183)
chr5 (25-110)||(4966819-4966905)
chr5 (25-110)||(4967228-4967314)
chr5 (25-110)||(21371153-21371239)
chr5 (25-110)||(32697683-32697769)
chr5 (28-75)||(5161620-5161668)
[»] chr8 (26 HSPs)
chr8 (25-110)||(5730820-5730906)
chr8 (25-110)||(18428219-18428305)
chr8 (25-110)||(2208717-2208803)
chr8 (25-110)||(9797184-9797270)
chr8 (25-110)||(15256288-15256374)
chr8 (25-110)||(41260274-41260360)
chr8 (25-108)||(18049595-18049679)
chr8 (25-110)||(599955-600041)
chr8 (25-110)||(28254428-28254514)
chr8 (25-110)||(34799082-34799168)
chr8 (25-110)||(35694335-35694421)
chr8 (25-110)||(15255856-15255942)
chr8 (25-110)||(16578553-16578639)
chr8 (25-110)||(28254883-28254969)
chr8 (25-110)||(42035775-42035861)
chr8 (28-110)||(16578111-16578194)
chr8 (25-110)||(6115568-6115654)
chr8 (25-110)||(34799540-34799626)
chr8 (65-110)||(35426845-35426890)
chr8 (25-88)||(7911073-7911137)
chr8 (28-110)||(35427272-35427355)
chr8 (25-110)||(9796729-9796815)
chr8 (25-110)||(18050048-18050134)
chr8 (25-110)||(41260718-41260804)
chr8 (65-110)||(28877387-28877432)
chr8 (25-88)||(42036229-42036293)
[»] chr7 (33 HSPs)
chr7 (25-110)||(7732944-7733030)
chr7 (25-110)||(9181535-9181621)
chr7 (25-110)||(11971337-11971423)
chr7 (25-110)||(15712368-15712454)
chr7 (25-110)||(25637655-25637741)
chr7 (25-110)||(48248049-48248135)
chr7 (28-110)||(27245664-27245747)
chr7 (25-110)||(16917716-16917802)
chr7 (25-110)||(26047960-26048046)
chr7 (492-580)||(46071387-46071478)
chr7 (25-110)||(786785-786871)
chr7 (25-110)||(5745642-5745728)
chr7 (25-110)||(16081302-16081388)
chr7 (25-110)||(28687596-28687682)
chr7 (25-117)||(14311744-14311837)
chr7 (25-110)||(5334276-5334362)
chr7 (25-86)||(26048403-26048465)
chr7 (25-110)||(787243-787329)
chr7 (25-110)||(26026775-26026861)
chr7 (28-110)||(48247590-48247673)
chr7 (25-110)||(5333883-5333969)
chr7 (25-110)||(7732491-7732577)
chr7 (25-110)||(24929765-24929851)
chr7 (33-110)||(27245206-27245284)
chr7 (25-110)||(34595229-34595315)
chr7 (25-110)||(39388725-39388811)
chr7 (65-102)||(35160664-35160701)
chr7 (25-107)||(35161259-35161342)
chr7 (25-110)||(2758155-2758241)
chr7 (25-110)||(16081756-16081842)
chr7 (25-110)||(25637200-25637286)
chr7 (65-110)||(40669706-40669751)
chr7 (25-88)||(28687956-28688020)
[»] chr6 (14 HSPs)
chr6 (25-110)||(24640642-24640728)
chr6 (25-110)||(25472470-25472556)
chr6 (25-110)||(31573723-31573810)
chr6 (25-110)||(5114471-5114557)
chr6 (497-580)||(15598659-15598745)
chr6 (25-110)||(30251149-30251235)
chr6 (25-110)||(25468852-25468938)
chr6 (25-110)||(5120926-5121012)
chr6 (25-110)||(31073599-31073685)
chr6 (25-110)||(31574182-31574268)
chr6 (38-110)||(31073146-31073219)
chr6 (65-110)||(29891582-29891627)
chr6 (384-420)||(15598542-15598578)
chr6 (33-88)||(31242831-31242887)
[»] chr4 (39 HSPs)
chr4 (25-110)||(21034238-21034324)
chr4 (25-110)||(28465538-28465624)
chr4 (25-110)||(34789385-34789471)
chr4 (25-110)||(46736658-46736744)
chr4 (25-110)||(14440285-14440371)
chr4 (25-110)||(28166007-28166093)
chr4 (25-110)||(45839007-45839092)
chr4 (25-116)||(54441026-54441118)
chr4 (485-580)||(17626456-17626554)
chr4 (25-110)||(56077781-56077867)
chr4 (25-110)||(6616675-6616761)
chr4 (25-110)||(12593027-12593113)
chr4 (25-110)||(24851319-24851405)
chr4 (25-110)||(26974286-26974372)
chr4 (25-102)||(41114168-41114246)
chr4 (25-110)||(33777635-33777721)
chr4 (25-110)||(41608872-41608958)
chr4 (26-110)||(1397598-1397683)
chr4 (492-580)||(20617579-20617670)
chr4 (28-110)||(36168791-36168874)
chr4 (25-119)||(54440565-54440660)
chr4 (25-110)||(16214952-16215038)
chr4 (25-110)||(24851923-24852009)
chr4 (25-110)||(34789840-34789926)
chr4 (38-110)||(33778082-33778155)
chr4 (25-91)||(35643577-35643644)
chr4 (25-110)||(28465084-28465170)
chr4 (25-110)||(33689832-33689918)
chr4 (25-110)||(46737112-46737198)
chr4 (25-110)||(14439831-14439917)
chr4 (33-110)||(21034702-21034780)
chr4 (25-110)||(34807596-34807682)
chr4 (25-88)||(17504416-17504480)
chr4 (25-110)||(229616-229702)
chr4 (25-110)||(12593480-12593566)
chr4 (25-110)||(19528872-19528958)
chr4 (25-110)||(19529151-19529237)
chr4 (25-110)||(55677415-55677501)
chr4 (378-418)||(17626625-17626665)
[»] chr3 (44 HSPs)
chr3 (25-110)||(49951549-49951635)
chr3 (25-110)||(2051298-2051384)
chr3 (25-110)||(38535312-38535398)
chr3 (25-110)||(41998232-41998318)
chr3 (25-110)||(44676929-44677015)
chr3 (25-110)||(50662869-50662955)
chr3 (25-110)||(51473313-51473399)
chr3 (25-109)||(329850-329935)
chr3 (25-110)||(14654202-14654288)
chr3 (25-110)||(43678298-43678384)
chr3 (25-110)||(49720818-49720904)
chr3 (25-110)||(51828415-51828501)
chr3 (25-110)||(16701249-16701335)
chr3 (25-109)||(55389609-55389694)
chr3 (25-123)||(32730846-32730945)
chr3 (25-107)||(34104644-34104727)
chr3 (25-110)||(330293-330379)
chr3 (25-110)||(22370599-22370685)
chr3 (25-110)||(46013880-46013966)
chr3 (25-110)||(47431699-47431785)
chr3 (25-110)||(51828997-51829083)
chr3 (26-110)||(40275096-40275181)
chr3 (29-89)||(39010482-39010543)
chr3 (28-110)||(51472858-51472941)
chr3 (28-110)||(52237277-52237360)
chr3 (25-110)||(40838655-40838741)
chr3 (25-110)||(51827960-51828046)
chr3 (25-110)||(52375788-52375874)
chr3 (25-110)||(55390054-55390140)
chr3 (485-580)||(18322175-18322274)
chr3 (25-110)||(40275551-40275636)
chr3 (28-110)||(16689361-16689444)
chr3 (25-110)||(14654646-14654732)
chr3 (25-110)||(30513725-30513810)
chr3 (25-110)||(40839109-40839195)
chr3 (365-424)||(18322038-18322100)
chr3 (28-102)||(2044282-2044357)
chr3 (28-110)||(49720374-49720457)
chr3 (33-110)||(25534893-25534971)
chr3 (25-110)||(38535752-38535838)
chr3 (33-110)||(41998693-41998771)
chr3 (25-110)||(49952003-49952089)
chr3 (26-110)||(39010078-39010163)
chr3 (25-88)||(43222415-43222479)
[»] chr2 (39 HSPs)
chr2 (25-110)||(16952938-16953024)
chr2 (25-110)||(17060909-17060995)
chr2 (25-110)||(38008408-38008494)
chr2 (25-110)||(11539640-11539726)
chr2 (25-110)||(20127739-20127825)
chr2 (25-110)||(33921069-33921155)
chr2 (25-110)||(5560054-5560140)
chr2 (485-580)||(1288362-1288460)
chr2 (25-110)||(4356213-4356299)
chr2 (25-110)||(13315496-13315582)
chr2 (25-110)||(43160468-43160554)
chr2 (32-110)||(649801-649880)
chr2 (25-92)||(13399877-13399944)
chr2 (28-110)||(44219647-44219730)
chr2 (25-110)||(62960-63046)
chr2 (25-110)||(4809336-4809422)
chr2 (25-110)||(6949454-6949540)
chr2 (25-126)||(11540095-11540199)
chr2 (25-110)||(63421-63507)
chr2 (29-110)||(15551136-15551218)
chr2 (25-110)||(20128194-20128280)
chr2 (25-110)||(24140131-24140217)
chr2 (25-110)||(32418603-32418689)
chr2 (25-110)||(42192243-42192329)
chr2 (25-110)||(42192700-42192786)
chr2 (25-110)||(44220102-44220188)
chr2 (25-110)||(38007953-38008039)
chr2 (25-111)||(4808881-4808968)
chr2 (52-110)||(9329915-9329974)
chr2 (25-102)||(20495204-20495282)
chr2 (25-109)||(16175807-16175892)
chr2 (28-110)||(16953394-16953477)
chr2 (28-110)||(25336060-25336143)
chr2 (25-111)||(33920614-33920701)
chr2 (485-535)||(1198019-1198069)
chr2 (25-110)||(6949901-6949987)
chr2 (33-110)||(9330260-9330338)
chr2 (25-110)||(15550676-15550762)
chr2 (25-86)||(43216166-43216228)
[»] chr1 (30 HSPs)
chr1 (25-110)||(34555839-34555925)
chr1 (25-110)||(37505070-37505156)
chr1 (25-110)||(50305242-50305328)
chr1 (25-110)||(10279004-10279090)
chr1 (25-110)||(9992157-9992244)
chr1 (25-102)||(29439379-29439457)
chr1 (25-110)||(37421401-37421488)
chr1 (25-110)||(21938566-21938652)
chr1 (25-110)||(44582516-44582602)
chr1 (25-110)||(30786774-30786861)
chr1 (25-110)||(9992612-9992698)
chr1 (25-118)||(17641826-17641920)
chr1 (25-110)||(30787255-30787341)
chr1 (25-88)||(2867936-2868000)
chr1 (25-116)||(10278545-10278637)
chr1 (25-110)||(1837508-1837594)
chr1 (25-110)||(16299139-16299224)
chr1 (25-110)||(29438933-29439019)
chr1 (25-110)||(44954683-44954769)
chr1 (25-110)||(52335967-52336053)
chr1 (25-110)||(37505524-37505610)
chr1 (28-89)||(44954250-44954312)
chr1 (25-110)||(50304442-50304528)
chr1 (38-88)||(23340208-23340259)
chr1 (33-110)||(2868173-2868251)
chr1 (25-110)||(39485068-39485154)
chr1 (25-110)||(45048158-45048244)
chr1 (38-110)||(44582060-44582133)
chr1 (25-108)||(4080026-4080110)
chr1 (25-88)||(16298707-16298771)
[»] scaffold0097 (1 HSPs)
scaffold0097 (25-110)||(46725-46811)
[»] scaffold0712 (1 HSPs)
scaffold0712 (28-102)||(6403-6478)
[»] scaffold0709 (1 HSPs)
scaffold0709 (28-102)||(6421-6496)


Alignment Details
Target: chr5 (Bit Score: 399; Significance: 0; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 25 - 580
Target Start/End: Complemental strand, 39083447 - 39082904
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaactctttttaatat 123  Q
    ||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||| | |||| || ||||||| ||||||||||||    
T  39083447 tagtttaagaacaattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggatcaaa-gtgtaattaagtctttttaatat 39083349  T
Q  124 taattttaca-taactgatatgagattgatttccctcttaaatcatcaccctcaactcaacacaacactcatcctgcacatcccaatgtcaaccggtggc 222  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||    
T  39083348 taattttacactaactgatatgagattgatttccctctcaaatcatcaccctcaactcaacac-----tcatcctgcacatcccaatgtcaaccggtggc 39083254  T
Q  223 ggatctctcttaagacccccgaggtgccacaaacatcccctnnnnnnngaaattgtatataggaaattactatagtacccctgagacattttagttcacg 322  Q
    |||||||| || |||||||||| ||||||||| ||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39083253 ggatctctgttgagacccccgaagtgccacaa-catcccctaaaaaaagaaattgtatataggaaattactatagtacccctgagacattttagttcacg 39083155  T
Q  323 cttagtcttagtctctcctctccatcctcaaacaaaatgcgattctcacctctcactcacagtctccccactcttcaccatcggcgacacgacggacggc 422  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |    
T  39083154 cttagtctgagtctctcctctccatcctcaaacaaaatgcgattctcacctctcactcacagtctccccactcttcaccatcggcgacacga-------c 39083062  T
Q  423 ggaagcagcacggcggcgaggtggaggcgcgacgcctctcacctctgaactctcatacacggatacatctcacttcagtttgttgtttccttgattttca 522  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39083061 ggaagcagcacggcggcgaggtggaggcgcgacgcctctcacctctgaactctcatacacggatacacctcacttcagtttgttgtttccttgattttca 39082962  T
Q  523 gttaaggtttgttctctctatcattccatgtttcattcctttgattctgattcctttc 580  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39082961 attaaggtttgttctctctatcattccatgtttcattcctttgattctgattcctttc 39082904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 28290101 - 28290187
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  28290101 tagtttaaggacgattttgttcgatttaaaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 28290187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 8419077 - 8419163
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| ||||||||  |||||||||||||||||| || |||||||||||||||||||||||| ||||||||| |||||||    
T  8419077 tagtttaaggacgattttgttcaatttaaaaaagataggaccatattcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 8419163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 18149822 - 18149736
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||| | ||||||| |||||||    
T  18149822 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtccaaatggtaggatcaaaagtgtaattaa 18149736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 15029766 - 15029852
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||| || ||| |||||||||||||||||||||||| || ||||||||| |||||||    
T  15029766 tagtttaaggacgattttgttcgatttaaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaa 15029852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 19291445 - 19291359
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||| |||||||| ||||||| |||| ||||||||| |||||||    
T  19291445 tagtttaaggacgattttgttcgatttaaaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaa 19291359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 14340474 - 14340401
Alignment:
Q  38 attttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| | |||||||    
T  14340474 attttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaa 14340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 15115549 - 15115635
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||| || |||||| |||||||||||||||||||||||  || | ||||||| |||||||    
T  15115549 tagtttaaggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaa 15115635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 21370775 - 21370689
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||| |||||||| |||||||||||||||  || |||||||| ||||||||||||| |||| || |||| |||||||||    
T  21370775 tagtttaaagacgattttgttcgatttaaaaaagatataaccattttcgtcagttggtcaaaatagtaggacaaaaaatataattaa 21370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 38900730 - 38900648
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataatta 109  Q
    |||| |||| |||||||| ||||||||| || ||||| ||||||||||||||||||||||||  || ||||||||| ||||||    
T  38900730 tttagggacgattttgttcgatttaaaagaggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 38901097 - 38901183
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||| | ||||| ||||||||||  || |||||||||| || ||||||||| |||||||    
T  38901097 tagtttaaggacgattttgttcgatttaaaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaa 38901183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 4966905 - 4966819
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| ||  || || |||||||||||||||||||||||  || ||||||||| |||||||    
T  4966905 tagtttagggacgattttgttcgatttaaaagaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 4967228 - 4967314
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || || ||| ||||| |||||||||||||||||  || ||||||||| |||||||    
T  4967228 tagtttagggacgattttgttcgatttaaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 4967314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 21371153 - 21371239
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||||||||||||| || ||||| || |||  ||||||||||||||||  || | ||||||| |||||||    
T  21371153 tagtttagggacgattttgtttgatttaaaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaa 21371239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 32697683 - 32697769
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| ||| |||| ||||||||| || |||||| | |||||||||||||||||||||  |  ||||||||| |||||||    
T  32697683 tagtttagggacgattctgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaa 32697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 5161668 - 5161620
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtga 75  Q
    ||||| |||||||||||| ||||||||||||||| ||| ||||||||||    
T  5161668 tttaaagacaattttgttcgatttaaaaaagatatgacaattttcgtga 5161620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 5730906 - 5730820
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  5730906 tagtttaaggacgattttgtttgatttaaaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 5730820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 18428219 - 18428305
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  18428219 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 18428305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 2208803 - 2208717
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| |||||||    
T  2208803 tagtttaaggacgattttgttcgatttaaaaaagataggacaattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 2208717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 9797184 - 9797270
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||    
T  9797184 tagtttaaggacgattttatttgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9797270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 15256288 - 15256374
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| |||||||    
T  15256288 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaa 15256374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 41260360 - 41260274
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| |||||||    
T  41260360 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaa 41260274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 18049679 - 18049595
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataatt 108  Q
    |||||||||||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||||    
T  18049679 tagtttaaggacgattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 18049595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 599955 - 600041
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| ||||||||  |||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||| |||||||    
T  599955 tagtttaaggacgattttgttccatttaaaaaagatatgaccattttcgttagttggtcaaaatggtaggaccaaaagtgtaattaa 600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 28254514 - 28254428
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| ||||||||  |||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||| |||||||    
T  28254514 tagtttaaggacgattttgttcaatttaaaatagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 28254428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 34799168 - 34799082
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| | |||||| ||||||||||| ||||||| |||||| |||||||||||||||||||  ||||||||| |||||||    
T  34799168 tagtttaaggacgactttgttcgatttaaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaa 34799082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 35694335 - 35694421
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||  ||||| |||||| ||||||| |||||||||| || ||||||||| |||||||    
T  35694335 tagtttaaggacgattttgttcgatttaaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaa 35694421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 15255942 - 15255856
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  15255942 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 15255856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 16578553 - 16578639
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||  |||||||| ||||| |||||||||  || ||||||||||||| ||||||||||||| ||||||||| |||||||    
T  16578553 tagtttaatgatgattttgttcgatttgaaaaagatataaccattttcgtgagttcgtcaaaatggtaggaccaaaagtgtaattaa 16578639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 28254883 - 28254969
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  28254883 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 28254969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 42035861 - 42035775
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || ||| || |||||||||||||||||||||||  || ||||||||| |||||||    
T  42035861 tagtttatggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42035775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 16578194 - 16578111
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||| |||||||| ||||||||| || |||||| | |||||||||||||||||||||  |||||||||| | |||||||    
T  16578194 tttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaagaaccaaaaatgtaattaa 16578111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 6115568 - 6115654
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | ||||| ||||||||||||||   || |||||||||||||||||    
T  6115568 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaa 6115654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 34799540 - 34799626
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| ||||||||||||| ||||||||| || ||||| || |||||| | ||||||||||||  || ||||||||| |||||||    
T  34799540 tagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgttaattggtcaaaatgaaaggaccaaaagtgtaattaa 34799626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 35426890 - 35426845
Alignment:
Q  65 cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||||||||||||||||||| || |||||| |||||||    
T  35426890 cattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaa 35426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 7911073 - 7911137
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatg 88  Q
    ||||||| |||| |||||||| ||||||||| || ||| || |||||||||||||||||||||||    
T  7911073 tagtttagggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatg 7911137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 35427272 - 35427355
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||| |||||||| | ||||||| || ||| || |||||||||||||||||||||||  || ||||||||| |||||||    
T  35427272 tttagggacgattttgttcggtttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 35427355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 9796815 - 9796729
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||  |||||||| ||||||||| || |||||| | ||| |||||||||||||||||  || ||||||||| |||||||    
T  9796815 tagtttatggatgattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9796729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 18050048 - 18050134
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || || ||| | |||||||||||||||||||||  || ||||||| | |||||||    
T  18050048 tagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 18050134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 41260718 - 41260804
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || || || || |||||||||||| ||||||||  |  |||||||||||||||||    
T  41260718 tagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttgatcaaaatgcaatgaccaaaagtataattaa 41260804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 28877387 - 28877432
Alignment:
Q  65 cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||||||||||||||||||  || ||||||||| |||||||    
T  28877387 cattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 42036229 - 42036293
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatg 88  Q
    ||||||| |||| |||||||| ||||||||| || || || ||||||||| ||||||||||||||    
T  42036229 tagtttagggacgattttgttcgatttaaaagaggtaagatcattttcgtaagttggtcaaaatg 42036293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 4e-27; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 7732944 - 7733030
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  7732944 tagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 7733030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 9181621 - 9181535
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  9181621 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9181535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 11971423 - 11971337
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||    
T  11971423 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtaggtcaaaatggtaggaccaaaagtataattaa 11971337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 15712454 - 15712368
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  15712454 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 15712368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 25637655 - 25637741
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  25637655 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 25637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 48248049 - 48248135
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| |||||||    
T  48248049 tagtttaaggacgattttgttcgatttaaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 48248135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 27245664 - 27245747
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||| |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||    
T  27245664 tttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaagaccaaaagtataattaa 27245747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 16917802 - 16917716
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||  |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  16917802 tagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 16917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 26048046 - 26047960
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||||| ||||||||||| ||||||| |||||||    
T  26048046 tagtttaaggacaattttattcgatttaaaaaagatatgaccattttcgtgagttggtcgaaatggtagaatcaaaagtgtaattaa 26047960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 492 - 580
Target Start/End: Original strand, 46071387 - 46071478
Alignment:
Q  492 tcacttcagtttgttgtttccttgattttcagttaaggtttg---ttctctctatcattccatgtttcattcctttgattctgattcctttc 580  Q
    ||||||||||||||||||| |||||||||||||| |||||||   ||||| || |||||| ||||||||||||||||||| |||||||||||    
T  46071387 tcacttcagtttgttgttttcttgattttcagtttaggtttgttcttctccctgtcattctatgtttcattcctttgattttgattcctttc 46071478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 786871 - 786785
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||||| ||||||||| |||||||||||| || ||| |||||||||||||||||||||||| || | ||||||| |||||||    
T  786871 tagtttaaggaaaattttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaa 786785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 5745728 - 5745642
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||| |  |||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||| |||||||    
T  5745728 tagtttaagaaagattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 5745642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 16081388 - 16081302
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||||||||| ||||| | ||||||||||||||| | || ||||||||| |||||||    
T  16081388 tagtttaaggacgattttgttcgatttaaaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaa 16081302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 28687682 - 28687596
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||| ||||||||| || ||||||||||||||||||||||| ||  ||||||||| |||||||    
T  28687682 tagtttaaggacgattttgttcgatttataaaagatagaaccattttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaa 28687596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 14311744 - 14311837
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaactctttt 117  Q
    |||||||| ||| |||||||| |||||||||||||||||| |||||| |||||||||||||| |||||  || |||||| ||||||| ||||||    
T  14311744 tagtttaaagacgattttgttcgatttaaaaaagataggaccatttttgtgagttggtcaaattggtacgacaaaaagtgtaattaattctttt 14311837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 5334276 - 5334362
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| |||||||||||||||||||||||  || ||||||||| |||||||    
T  5334276 tagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 5334362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 26048403 - 26048465
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaa 86  Q
    ||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||||||    
T  26048403 tagtttaaggacaattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtcaaaa 26048465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 787243 - 787329
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| ||||||||||||||||||||||   || ||||||||| |||||||    
T  787243 tagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaa 787329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 26026775 - 26026861
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||   ||||||| |||||| |||||||||||| |||||||||| || |||||||| |||| ||||||||| |||||||    
T  26026775 tagtttaaggatggttttgttcgatttataaaagataggaccattttcgtgaatttgtcaaaatagtaggaccaaaagtgtaattaa 26026861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 48247673 - 48247590
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||| |||||||||||||||||| || |||||| | |||||||||||| ||||||||  || ||||||||| |||||||    
T  48247673 tttagggacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 48247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 5333969 - 5333883
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || || ||| |||||||||||||||||||||||  || | ||||||| |||||||    
T  5333969 tagtttagggacgattttgttcgatttaaaagaggtacgaccattttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 5333883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 7732577 - 7732491
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||| || ||||| || |||||||||||| ||||||||  || ||||||| | |||||||    
T  7732577 tagtttaaggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 7732491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 24929765 - 24929851
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||||||||||||| || || || || |||||||||||||||||||||  || ||||||| | |||||||    
T  24929765 tagtttagggacgattttgtttgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 24929851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 27245284 - 27245206
Alignment:
Q  33 ggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||||||| ||||||||| || |||||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  27245284 ggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 27245206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 34595229 - 34595315
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| |   ||||| |||||||||||||||||||||||  || ||||||||| |||||||    
T  34595229 tagtttagggacgattttgttcgatttaaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 34595315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 39388725 - 39388811
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggacat-tttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||  ||| |||||||| ||||||||| || |||||||  |||||||||||||||||||||  || ||||||||| |||||||    
T  39388725 tagtttagagacgattttgttcgatttaaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 39388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 35160701 - 35160664
Alignment:
Q  65 cattttcgtgagttggtcaaaatggtagaaccaaaagt 102  Q
    |||||||||||||||||||||||||||| |||||||||    
T  35160701 cattttcgtgagttggtcaaaatggtaggaccaaaagt 35160664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 35161259 - 35161342
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataat 107  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | || ||||||||||||||||||  || ||||||||| ||||    
T  35161259 tagtttagggacgattttgttcgatttaaaagaggtaggaccaattccgtgagttggtcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 2758155 - 2758241
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || ||| || ||||||||||||||  |||||||  || ||||||||| |||||||    
T  2758155 tagtttatggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaa 2758241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 16081756 - 16081842
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||  |||||||| ||||||||| || ||||| || |||||||||||||||||||||  || |||||| || |||||||    
T  16081756 tagtttagggatgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaa 16081842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 25637286 - 25637200
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | |||| |||||||||||| |||  || ||||||||| |||||||    
T  25637286 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaa 25637200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 40669706 - 40669751
Alignment:
Q  65 cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||||||||||||||||||| || | ||||||| |||||||    
T  40669706 cattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaa 40669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 28687956 - 28688020
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatg 88  Q
    ||||||| |||| |||||||| ||||||||| || || || || |||||||||||||||||||||    
T  28687956 tagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatg 28688020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 24640642 - 24640728
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  24640642 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtataattaa 24640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 25472470 - 25472556
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||| |||||||    
T  25472470 tagtttaaggacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 25472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 31573810 - 31573723
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaaga-taggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||| || |||||||| ||||||||||| | |||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  31573810 tagtttaagaacgattttgttcgatttaaaaaaaaataggactattttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 31573723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 5114557 - 5114471
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| | ||||| | |||||||    
T  5114557 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaa 5114471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 497 - 580
Target Start/End: Original strand, 15598659 - 15598745
Alignment:
Q  497 tcagtttgttgtttccttgattttcagttaaggtttg---ttctctctatcattccatgtttcattcctttgattctgattcctttc 580  Q
    |||||||||||||| |||||||||||||| |||||||   ||||| || |||||| ||||||||||||||||||| |||||||||||    
T  15598659 tcagtttgttgttttcttgattttcagttcaggtttgttcttctccctgtcattctatgtttcattcctttgattttgattcctttc 15598745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 30251149 - 30251235
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| ||| ||||| |||||||||||||||| |||| | ||||||| |||||||    
T  30251149 tagtttaaggacgattttgttcgatttaaaaaagatatgacaatttttgtgagttggtcaaaatagtaggatcaaaagtgtaattaa 30251235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 25468938 - 25468852
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| ||||| ||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  25468938 tagtttagggacgattttgttcgatttaaaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaa 25468852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 5120926 - 5121012
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||  | |||||||||||||||||||||  || ||||||||| |||||||    
T  5120926 tagtttagggacgattttgttcgatttaaaagaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 5121012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 31073599 - 31073685
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| ||||||||||||| ||||||||| || || || || ||||||||| |||||||||||  || ||||||||| |||||||    
T  31073599 tagtttagggacaattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 31073685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 31574182 - 31574268
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || || ||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  31574182 tagtttagggacgattttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 31574268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 31073219 - 31073146
Alignment:
Q  38 attttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| |||||||||||||||||| ||||||| || ||||||||||||   || ||||||||| |||||||    
T  31073219 attttgttcgatttaaaaaagataggaccattttcatgtgttggtcaaaattaaaggaccaaaagtgtaattaa 31073146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 29891582 - 29891627
Alignment:
Q  65 cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||  ||||||||||||||||||| ||||||||| |||||||    
T  29891582 cattttcacgagttggtcaaaatggtaggaccaaaagtgtaattaa 29891627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 384 - 420
Target Start/End: Original strand, 15598542 - 15598578
Alignment:
Q  384 gtctccccactcttcaccatcggcgacacgacggacg 420  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  15598542 gtctccccactcttcaccttcggcaacacgacggacg 15598578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 31242887 - 31242831
Alignment:
Q  33 ggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatg 88  Q
    ||||| || |||| ||||||||||||  |||| ||||||||||||||||||||||||    
T  31242887 ggacagttatgttcgatttaaaaaaggcaggatcattttcgtgagttggtcaaaatg 31242831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 21034324 - 21034238
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  21034324 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 21034238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 28465538 - 28465624
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  28465538 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 28465624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 34789471 - 34789385
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  34789471 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 34789385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 46736744 - 46736658
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  46736744 tagtttaaggacaattttgttcgatttaaaaaaaataagaccattttcgtgagttggtcaaaatagtagaaccaaaagtataattaa 46736658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 14440285 - 14440371
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||  |||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  14440285 tagtttaaggatgattttgttcgatttaaaaaagataggaccattttcgtaagttggtcaaaatggtaggaccaaaagtataattaa 14440371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 28166093 - 28166007
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| | |||||||    
T  28166093 tagtttaaggacaattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaaatttaattaa 28166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 45839007 - 45839092
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggacattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||||||||||  |||||||||||||||||||| |||| ||||||||| |||||||    
T  45839007 tagtttaaggacgattttgttcgatttaaaaaagataggaccatttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 45839092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 54441026 - 54441118
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaactcttt 116  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||||||||| || |||||||||||| ||||||||| ||||||| |||||    
T  54441026 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagctgatcaaaatggtaggaccaaaagtgtaattaagtcttt 54441118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 485 - 580
Target Start/End: Complemental strand, 17626554 - 17626456
Alignment:
Q  485 atacatctcacttcagtttgttgtttccttgattttcagttaaggtttgttc-tctc--tatcattccatgtttcattcctttgattctgattcctttc 580  Q
    ||||| |||||||||||||||||||| |||||||||||||| |||||||||| ||||  | |||||| ||||||||||||||||||| |||||||||||    
T  17626554 atacacctcacttcagtttgttgttttcttgattttcagttcaggtttgttcttctccttgtcattctatgtttcattcctttgattttgattcctttc 17626456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 56077781 - 56077867
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |||||||    
T  56077781 tagtttaaggacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaa 56077867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 6616761 - 6616675
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||| ||| ||| |||||||||||||| |||||||| ||||||||||||| |||||||    
T  6616761 tagtttaaggacgattttgttcgatttaaaaaaaataagaccattttcgtgagttgatcaaaatgatagaaccaaaagtgtaattaa 6616675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 12593113 - 12593027
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||| || ||| |||||||||||||||||||| |||||| ||||||||| |||||||    
T  12593113 tagtttaaggacgattttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaa 12593027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 24851405 - 24851319
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| ||||||||  ||||||||||||||| || ||||||||||||||||||||||||||| | ||||||| |||||||    
T  24851405 tagtttaaggacgattttgttcaatttaaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 24851319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 26974372 - 26974286
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||| || |||||||||| ||||||||| |||||||    
T  26974372 tagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaa 26974286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 41114246 - 41114168
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggaca-ttttcgtgagttggtcaaaatggtagaaccaaaagt 102  Q
    ||||||||||||  ||||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  41114246 tagtttaaggacgtttttgttcgatttaaaaaagataggacccttttcgtgagttggtcaaaatggtaggaccaaaagt 41114168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 33777721 - 33777635
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||| ||||| ||| || |||||||||||||||||||||||||||| | ||||||| |||||||    
T  33777721 tagtttaaggacgattttgttcgattttaaaaaaatatgatcattttcgtgagttggtcaaaatggtaggaacaaaagtgtaattaa 33777635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 41608872 - 41608958
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||| || |||||||| ||||||||| || |||||| | ||||||||||||||||||||||||| ||||||||| |||||||    
T  41608872 tagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 41608958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 1397683 - 1397598
Alignment:
Q  26 agtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||||| |||||||| |||||||||||||||||| ||||||  |||||||||||||||||| | | ||||||| |||||||    
T  1397683 agtttaaggacgattttgttcgatttaaaaaagataggaccatttttatgagttggtcaaaatggttggatcaaaagtgtaattaa 1397598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 492 - 580
Target Start/End: Complemental strand, 20617670 - 20617579
Alignment:
Q  492 tcacttcagtttgttgtttccttgattttcagttaaggtttg---ttctctctatcattccatgtttcattcctttgattctgattcctttc 580  Q
    ||||||||||||||||||| |||||||||||||| | |||||   ||||| || |||||| || |||||||||||||||| |||||||||||    
T  20617670 tcacttcagtttgttgttttcttgattttcagttcaagtttgttcttctccctgtcattctatatttcattcctttgattttgattcctttc 20617579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 36168791 - 36168874
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||| | |||||||||  |||||||||| |||||| |||||||||||||||||||||||||||| ||||| ||| |||||||    
T  36168791 tttaagaataattttgttctatttaaaaaaaataggatcattttcgtgagttggtcaaaatggtaggaccaagagtgtaattaa 36168874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 54440660 - 54440565
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaactcttttta 119  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | |||||||||||||||||||||  || ||||||||| ||||||| ||||||||    
T  54440660 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagtcttttta 54440565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 16214952 - 16215038
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| ||||| ||  |||||||||||||| || ||||||||| ||||| |||||||| ||| |||||||||||||||||    
T  16214952 tagtttaaggacgattttattcaatttaaaaaagatatgatcattttcgtaagttgatcaaaatgataggaccaaaagtataattaa 16215038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 24851923 - 24852009
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || ||||| || |||||||||||||||||||||  || |||||||||||||||||    
T  24851923 tagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataattaa 24852009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 34789840 - 34789926
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| ||||||||||||| ||||||||| || |||||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  34789840 tagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 34789926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 33778082 - 33778155
Alignment:
Q  38 attttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||||||||| || ||| | |||||||||||||| |||||||||||||||| |||||| |||||||    
T  33778082 attttgtttgatttaaaagaggtagaatcattttcgtgagttagtcaaaatggtagaacgaaaagtgtaattaa 33778155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 35643644 - 35643577
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggta 91  Q
    |||||||||||| ||||| ||  |||| ||||||||||||| ||||||||||||||||||||||||||    
T  35643644 tagtttaaggacgattttattcaattttaaaaagataggaccattttcgtgagttggtcaaaatggta 35643577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 28465170 - 28465084
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||| || ||||| || |||||| ||||||||||||||| || || |||||| |||||||    
T  28465170 tagtttaaggacgattttgttcgatttaaaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaattaa 28465084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 33689918 - 33689832
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||| || ||||| || ||| |||||||||||||||||  || ||||||||| |||||||    
T  33689918 tagtttaaggacgattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 33689832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 46737112 - 46737198
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  46737112 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 46737198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 14439917 - 14439831
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| ||||||||| ||||||||||| || ||| | |||||||||||||||||||||  || ||||||| | |||||||    
T  14439917 tagtttagggacgattttgtttaatttaaaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 21034702 - 21034780
Alignment:
Q  33 ggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||||||| ||||||||| ||||||||| | |||||||||||||||||||||  || ||||||| | |||||||    
T  21034702 ggacgattttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaa 21034780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 34807596 - 34807682
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| || ||||||||||||| |  |||||||||||||| |||||||  ||  ||||||| |||||||||    
T  34807596 tagtttaaggacgattttgttcgaattaaaaaagatagaataattttcgtgagttgatcaaaataataagaccaaaaatataattaa 34807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 17504416 - 17504480
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatg 88  Q
    ||||||||||||  ||||||| ||||||||| |||||||| |||||||||||| || ||||||||    
T  17504416 tagtttaaggacggttttgttcgatttaaaagagataggaccattttcgtgagctgttcaaaatg 17504480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 229616 - 229702
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||||||||| ||| ||  | || |||||||||||| |||||||||||  |  ||||||||| |||||||    
T  229616 tagtttaaggacgattttgtttgatttgaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 12593480 - 12593566
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||  ||| |||||||| ||||||||| || || ||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  12593480 tagtttacagacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 12593566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 19528958 - 19528872
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| ||||| || ||||||||| || |||||| | |||||||| ||||||||||||  || ||||||||| |||||||    
T  19528958 tagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaa 19528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 19529151 - 19529237
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||| ||||||||  |||||||| |||||| | ||||||  | |||||||||||||||||| | ||||||| |||||||    
T  19529151 tagtttaaagacgattttgttcaatttaaaagagatagaatcatttttataagttggtcaaaatggtaggagcaaaagtgtaattaa 19529237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 55677415 - 55677501
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||  ||| |||||||| ||||||||| || |||||| | ||||||||||||||||||||   || ||||||||| |||||||    
T  55677415 tagtttagagacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaa 55677501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 17626665 - 17626625
Alignment:
Q  378 ctcacagtctccccactcttcaccatcggcgacacgacgga 418  Q
    ||||| |||||||||||||||||||||||| || |||||||    
T  17626665 ctcacggtctccccactcttcaccatcggcaacgcgacgga 17626625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 49951635 - 49951549
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  49951635 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 49951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 2051384 - 2051298
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  2051384 tagtttaagaacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 2051298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 38535398 - 38535312
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| |||||||    
T  38535398 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaa 38535312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 41998318 - 41998232
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||    
T  41998318 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaa 41998232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 44676929 - 44677015
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  44676929 tagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 44677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 50662869 - 50662955
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||||    
T  50662869 tagtttaaggacgattttgttcgatttaaaaaagatatgactattttcgtgagtttgtcaaaatggtaggaccaaaagtataattaa 50662955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 51473313 - 51473399
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| |||||||    
T  51473313 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 51473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 329935 - 329850
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataatta 109  Q
    |||||||||||| |||||||| |||||||||||| |||||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  329935 tagtttaaggacgattttgttcgatttaaaaaagttaggaccattttcgtgagttggtcaaaatggaagaaccaaaagtgtaatta 329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 14654288 - 14654202
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| |||||||    
T  14654288 tagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaa 14654202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 43678384 - 43678298
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| ||| || |||||||||||||||||||||||| ||||||||| |||||||    
T  43678384 tagtttaaggacgattttgttcgatttaaaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 43678298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 49720818 - 49720904
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||| |||| ||||||||| |||||||    
T  49720818 tagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 49720904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 51828415 - 51828501
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||||| |||||| ||||||||| |||||||    
T  51828415 tagtttaaggacaattttgttcgatttaaaaaatatatgaccattttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaa 51828501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 16701249 - 16701335
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| || |||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |||||||    
T  16701249 tagtttaaggacgattttgttcgaattaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaa 16701335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 55389694 - 55389609
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataatta 109  Q
    |||||||||||| |||||||| |||||||||||| |||||| ||||||||||||||||| |||||| || ||||||||| ||||||    
T  55389694 tagtttaaggacgattttgttcgatttaaaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaatta 55389609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 32730846 - 32730945
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaactctttttaatat 123  Q
    |||||||||||| ||||||||  ||||||||||||||||| ||||||| ||||||||| |||||||||  ||||||||| ||||||| ||| ||| ||||    
T  32730846 tagtttaaggacgattttgttcaatttaaaaaagataggaccattttcttgagttggttaaaatggtatgaccaaaagtgtaattaagtctattttatat 32730945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 34104727 - 34104644
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataat 107  Q
    |||||||| ||| ||||||||  ||||||||||||||| || |||||||||||||||||||||||||||||| |||||| ||||    
T  34104727 tagtttaatgacgattttgttcaatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtagaacaaaaagtgtaat 34104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 330293 - 330379
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||  || |||||| || |||||||    
T  330293 tagtttagggacgattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaa 330379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 22370685 - 22370599
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||||| |||||||||| |||||| |||||||||||||||||||||||  || ||||||||| |||||||    
T  22370685 tagtttagggacgattttgtttggtttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 46013880 - 46013966
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||||||| | |||||| | ||||||||||||||| ||| ||||||||| |||||||    
T  46013880 tagtttaaggacgattttgttcgatttaaaaaagatagaaccatttttgggagttggtcaaaatgatagtaccaaaagtgtaattaa 46013966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 47431785 - 47431699
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||| |||||||| ||||||||| || || ||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  47431785 tagtttaaagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 47431699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 51828997 - 51829083
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| ||||||||||| |||||||||||| || ||||||||||||||| ||||||| |||  ||||||||| |||||||    
T  51828997 tagtttaaggacgattttgtttgaattaaaaaagatacgaccattttcgtgagttgatcaaaatagtatgaccaaaagtgtaattaa 51829083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 40275181 - 40275096
Alignment:
Q  26 agtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||| ||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||  || ||||||||| |||||||    
T  40275181 agtttagggacaattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 40275096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 39010482 - 39010543
Alignment:
Q  29 ttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatgg 89  Q
    |||||||| |||||||| |||||||||||||||||| |||||||||||| ||||||||||||    
T  39010482 ttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagctggtcaaaatgg 39010543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 51472941 - 51472858
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggacat-tttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| ||||||||||||||||||||||| || ||||| |  |||| ||||||||||||||||  || |||||||||||||||||    
T  51472941 tttagggacaattttgtttgatttaaaagaggtaggaaaaatttcatgagttggtcaaaatgcaaggaccaaaagtataattaa 51472858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 52237277 - 52237360
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||| |||||||| ||||||||| || |||||| |||||||||||||||||||||||  || ||||||||| |||||||    
T  52237277 tttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 52237360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 40838741 - 40838655
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||||||||||||| || || ||| |||||||||||||||||||||||  || | ||||||| |||||||    
T  40838741 tagtttatggacgattttgtttgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaa 40838655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 51828046 - 51827960
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  51828046 tagtttagggacgattttgttcgatttaaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 51827960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 52375788 - 52375874
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| ||||||||  |||||||| || |||||| |||||||||||||||||||||||  || ||||||||| |||||||    
T  52375788 tagtttatggacgattttgttcaatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 52375874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 55390054 - 55390140
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||  ||| ||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||  || ||||||||| |||||||    
T  55390054 tagtttagtgacgattttgtttgatttaaaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaa 55390140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 580
Target Start/End: Original strand, 18322175 - 18322274
Alignment:
Q  485 atacatctcacttcagtttgttgtttccttgattttcagttaaggtttgttct-ctctatcattc---catgtttcattcctttgattctgattcctttc 580  Q
    ||||| |||| ||| ||||||||||| ||||||||||| || | ||||||||| |||  ||||||   |||||||||||||||||||| |||||||||||    
T  18322175 atacacctcagttccgtttgttgttttcttgattttcaattcacgtttgttcttctccctcattctatcatgtttcattcctttgattttgattcctttc 18322274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 40275551 - 40275636
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggacattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||  ||| |||||||| ||||||||| || ||||||  |||||||||||||||||||||  || ||||||||| |||||||    
T  40275551 tagtttagagacgattttgttcgatttaaaagaggtaggaccatttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 40275636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 16689444 - 16689361
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||| |||||||| ||||||||| || |||||| | ||||||||||||||||||||| ||| ||||||| | |||||||    
T  16689444 tttatggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgctaggaccaaaactgtaattaa 16689361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 14654646 - 14654732
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatag-gacattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || ||| | || |||||||||||||||||||||  || ||||||||| |||||||    
T  14654646 tagtttacggacgattttgttcgatttaaaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 14654732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 30513810 - 30513725
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||| || ||||| || ||||||||||||||||||| ||||||||||||| |||||||||  || ||||||| | |||||||    
T  30513810 tagtttaag-acgattttattcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaa 30513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 40839109 - 40839195
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || || ||| ||||||||||||| |||||||||  || ||||||||| |||||||    
T  40839109 tagtttagggacgattttgttcgatttaaaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaa 40839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 18322038 - 18322100
Alignment:
Q  365 ttctcacctctcac---tcacagtctccccactcttcaccatcggcgacacgacggacggcgg 424  Q
    ||||||||||||||   |||| |||||||||||||||||| |||||||| ||||| |||||||    
T  18322038 ttctcacctctcacgcctcacggtctccccactcttcaccttcggcgacgcgacgaacggcgg 18322100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 2044357 - 2044282
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagt 102  Q
    |||| |||| |||||||| ||||||||| || || ||| |||||| ||||||||||||||||  ||||||||||||    
T  2044357 tttatggacgattttgttcgatttaaaagaggtatgaccattttcatgagttggtcaaaatgcgagaaccaaaagt 2044282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 49720457 - 49720374
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||| |||||||| ||||||||| || |||||| | |||||||||||||||||||||  || | ||||||| |||||||    
T  49720457 tttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 49720374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 25534971 - 25534893
Alignment:
Q  33 ggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||||||| ||||||||| || |||||| |||||| ||| ||||||||||||  || ||||||||| |||||||    
T  25534971 ggacgattttgttcgatttaaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaa 25534893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 38535752 - 38535838
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| ||||| || ||||||||| |||| |||| | |||||| ||||||||||||||   | |||||||||||||||||    
T  38535752 tagtttagggacgattttattcgatttaaaagagatcggactaatttcgtaagttggtcaaaatgcacggaccaaaagtataattaa 38535838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 41998693 - 41998771
Alignment:
Q  33 ggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||||||| ||||||||| || |||||| | |||||| ||||||||||||||  || ||||||||| |||||||    
T  41998693 ggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 41998771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 49952003 - 49952089
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||| |||||||| ||||||||| || || ||| | |||||||||||||||||||||  || ||||||| | |||||||    
T  49952003 tagtttaatgacgattttgttcgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 49952089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 39010163 - 39010078
Alignment:
Q  26 agtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||||||||||| ||||||||| || || || || ||| |||||||||||||||||  || ||||||| | |||||||    
T  39010163 agtttaagaacaattttgttcgatttaaaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 39010078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 43222479 - 43222415
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatg 88  Q
    ||||||| |||| |||||||| ||||||||| ||| |  || |||||||||||||||||||||||    
T  43222479 tagtttagggacgattttgttcgatttaaaagagacataactattttcgtgagttggtcaaaatg 43222415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 16953024 - 16952938
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggaca-ttttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  16953024 tagtttaaggacgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 16952938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 17060995 - 17060909
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggaca-ttttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  17060995 tagtttaaggacgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 17060909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 38008408 - 38008494
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  38008408 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 38008494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 11539726 - 11539640
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  11539726 tagtttaaggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 11539640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 20127825 - 20127739
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| |||||||    
T  20127825 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaa 20127739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 33921069 - 33921155
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  33921069 tagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 33921155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 5560140 - 5560054
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| ||||||||  |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  5560140 tagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 5560054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 485 - 580
Target Start/End: Complemental strand, 1288460 - 1288362
Alignment:
Q  485 atacatctcacttcagtttgttgtttccttgattttcagttaaggtttg---ttctctctatcattccatgtttcattcctttgattctgattcctttc 580  Q
    ||||| |||||||||||||||||||| ||||||||| |||| |||||||   ||||| || |||||| ||||||||||||||||||| |||||||||||    
T  1288460 atacacctcacttcagtttgttgttttcttgatttttagttcaggtttgttcttctccctgtcattctatgtttcattcctttgattttgattcctttc 1288362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 4356213 - 4356299
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| ||| ||| ||||||||||||||||||| ||| ||||||||| |||||||    
T  4356213 tagtttaaggacgattttgttcgatttaaaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 4356299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 13315582 - 13315496
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||| || |||||| |||||||    
T  13315582 tagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaattaa 13315496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 43160468 - 43160554
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||| |||||||    
T  43160468 tagtttaaggacgatttagttcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaa 43160554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 649801 - 649880
Alignment:
Q  32 aggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||||||| |||||||    
T  649801 aggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 649880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 13399877 - 13399944
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggacattttcgtgagttggtcaaaatggtag 92  Q
    ||||||||||||||||||||| ||||||||| | ||||  ||||||||||||||||||||||||||||    
T  13399877 tagtttaaggacaattttgttcgatttaaaagaaatagaccattttcgtgagttggtcaaaatggtag 13399944  T

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Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 44219730 - 44219647
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||||||||| |||||||||||| ||||| |||||| |||||||| ||||||||| || ||||||||| |||||||    
T  44219730 tttaaggacaattttgttcgatttaaaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaa 44219647  T

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Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 63046 - 62960
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||| |||||| |||||| |||||||||||||||||||||||| || |||| |||| |||||||    
T  63046 tagtttaaggacgattttgttcgattttaaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaa 62960  T

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Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 4809336 - 4809422
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| | ||||||  |||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||    
T  4809336 tagtttaaggacgactttgttcaatttaaaaaacataggaccattttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaa 4809422  T

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Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 6949540 - 6949454
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||| |||||| |||||||| |||||||||||||||||| |||||||||||||| ||||||||| ||| ||||||| | |||||||    
T  6949540 tagttaaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaa 6949454  T

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Target: chr2; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 11540095 - 11540199
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa--ctctttttaat 121  Q
    ||||||| |||| |||||||| ||||||||| || |||||| |||||||||||||||||||||||  |  |||||||||||||||||  || ||||||||    
T  11540095 tagtttatggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaagcctatttttaat 11540194  T
Q  122 attaa 126  Q
    |||||    
T  11540195 attaa 11540199  T

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Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 63421 - 63507
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||||||||||||| ||||| ||| ||||||||||||||||||||||   || ||||||| |||||||||    
T  63421 tagtttagggacgattttgtttgatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaaatataattaa 63507  T

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Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 15551136 - 15551218
Alignment:
Q  29 ttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| |||||||| ||||||||||| ||| ||| ||||| |||||||||||||||||||||  |||||||| |||||||    
T  15551136 ttaaggacgattttgttcgatttaaaaaatatatgaccatttttgtgagttggtcaaaatggtagggccaaaagtgtaattaa 15551218  T

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Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 20128194 - 20128280
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||||||||||||| || ||||| || |||||||||||||| ||||||  || ||||||||| |||||||    
T  20128194 tagtttaaggacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaa 20128280  T

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Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 24140131 - 24140217
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||  || | ||||||| |||||||    
T  24140131 tagtttatggacgattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaa 24140217  T

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Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 32418603 - 32418689
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||| || ||| | || |||||||| |||||||||||| ||| |||||||||||||||||    
T  32418603 tagtttaaggacgattttgttcgatttaaaagaggtagaatcaatttcgtgaattggtcaaaatgataggaccaaaagtataattaa 32418689  T

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Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 42192329 - 42192243
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| |||||||||||||||||||||||  || ||||||||| |||||||    
T  42192329 tagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42192243  T

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Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 42192700 - 42192786
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| |||||||||||||||||||||||  || ||||||||| |||||||    
T  42192700 tagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 42192786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 44220102 - 44220188
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| ||||||||||||||||||||| || || ||||||||||||||||||||||||  || || |||||| |||||||    
T  44220102 tagtttagggacgattttgtttgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaa 44220188  T

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Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 38008039 - 38007953
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  38008039 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 38007953  T

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Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 4808968 - 4808881
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaac 111  Q
    ||||||| |||| |||||||| ||||||||| || ||||| || |||||||||||||||||||||  ||||| |||| | ||||||||    
T  4808968 tagtttatggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaagaactaaaaatgtaattaac 4808881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 9329974 - 9329915
Alignment:
Q  52 aaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||||| ||||| |||||||||||||||| |||| ||||||||| |||||||    
T  9329974 aaaaaagataggaccatttttgtgagttggtcaaaattgtaggaccaaaagtgtaattaa 9329915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 20495282 - 20495204
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagt 102  Q
    ||||||| |||| |||||||| ||||||||| ||  | || ||||||||||||||||||||||||  ||||||||||||    
T  20495282 tagtttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaaaagt 20495204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 16175807 - 16175892
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataatta 109  Q
    |||||||||||| |||||||| ||||||||| || || || || |||||||||||||| ||||||  || ||||||||| ||||||    
T  16175807 tagtttaaggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaatta 16175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 16953394 - 16953477
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| ||||| ||||||| ||||||||| || |||||| | |||| ||||||||||||||||  || ||||||||| |||||||    
T  16953394 tttagggacatttttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaa 16953477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 25336060 - 25336143
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||| |||||||| ||||||||| |  |||||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  25336060 tttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 25336143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 33920701 - 33920614
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaac 111  Q
    ||||||| |||| |||||||| ||||||||| || || || || |||||||||||||||||||||  || ||||||| | ||||||||    
T  33920701 tagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaac 33920614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 535
Target Start/End: Complemental strand, 1198069 - 1198019
Alignment:
Q  485 atacatctcacttcagtttgttgtttccttgattttcagttaaggtttgtt 535  Q
    ||||| ||||||||||||||||||||  || |||||||||| |||||||||    
T  1198069 atacacctcacttcagtttgttgttttttttattttcagttcaggtttgtt 1198019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 6949901 - 6949987
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| ||||||||  |||||||| |  |||||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  6949901 tagtttagggacgattttgttctatttaaaagatgtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 6949987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 9330260 - 9330338
Alignment:
Q  33 ggacaattttgtttgatttaaaaaagataggacat-tttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||||||| ||||||||| || || ||||  |||||||||||||||||||||  || ||||||||| |||||||    
T  9330260 ggacgattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9330338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 15550762 - 15550676
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | |||||||||||||||| ||||  || | ||||||| |||||||    
T  15550762 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaa 15550676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 43216166 - 43216228
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaa 86  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | |||||||||||||||||||    
T  43216166 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaa 43216228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 34555839 - 34555925
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || |||||| |||||||    
T  34555839 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaa 34555925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 37505156 - 37505070
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||    
T  37505156 tagtttaaggacgattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 37505070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 50305242 - 50305328
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| |||||||    
T  50305242 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggttaaaatggtagaaccaaaagtgtaattaa 50305328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 10279004 - 10279090
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||| ||||| | ||||||| |||||||    
T  10279004 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaacggtaggatcaaaagtgtaattaa 10279090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 9992244 - 9992157
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtc-aaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| |||||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||| |||||||    
T  9992244 tagtttaaggaccattttgttcgatttaaaaaagataggaccatttccgtgagttggtcaaaaatggtaggaccaaaagtgtaattaa 9992157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 29439379 - 29439457
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagt 102  Q
    |||||||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||||||||| | |||||||||    
T  29439379 tagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttgatcaaaatggtgggaccaaaagt 29439457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 37421401 - 37421488
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaa-gataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||  || |||||| |||||||    
T  37421401 tagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaatggtatgactaaaagtgtaattaa 37421488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 21938652 - 21938566
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||||||||| || ||||||||||||||| |||||||||||  ||||||||| |||||||    
T  21938652 tagtttatggacgattttgttcgatttaaaaaagataagatcattttcgtgagttgatcaaaatggtaagaccaaaagtgtaattaa 21938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 44582516 - 44582602
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||| |||||||| ||||| |||| |||| ||| |||||||||||||| |||||||||||||||||||||| |||||||    
T  44582516 tagtttaaagacgattttgttcgatttgaaaatgatatgaccattttcgtgagttgatcaaaatggtagaaccaaaagtgtaattaa 44582602  T

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Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 30786861 - 30786774
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac--attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || ||||||  |||||||||||||||||||||||  |||||||||||| |||||||    
T  30786861 tagtttagggacgattttgttcgatttaaaagaggtaggaccaattttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaa 30786774  T

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Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 9992612 - 9992698
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||||| || |||||||| |||||||||||||||||| ||||||| |||||| |||||||||  || ||||||||| |||||||    
T  9992612 tagtttaagcacgattttgttcgatttaaaaaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaa 9992698  T

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Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 17641826 - 17641920
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaactcttttt 118  Q
    ||||||| |||| |||||||| ||||||||| || || ||| |||||||||||||||||||||||  || ||||||||| ||||||| |||||||    
T  17641826 tagtttagggacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaatcttttt 17641920  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 30787255 - 30787341
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| |||||||| ||||| ||||||||| ||| |||||||||||||| || ||||||||| | ||||||| |||||||    
T  30787255 tagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagttgatctaaatggtaggatcaaaagtgtaattaa 30787341  T

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Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 2868000 - 2867936
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatg 88  Q
    |||||||| |||||||||||| ||||||||| ||||| || ||||||||||||||||||||||||    
T  2868000 tagtttaacgacaattttgttcgatttaaaagagatatgatcattttcgtgagttggtcaaaatg 2867936  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 10278637 - 10278545
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaactcttt 116  Q
    ||||||| |||| |||||||| ||||||||| || ||||| || |||||||||||||||||||||  || ||||||||| ||||||| |||||    
T  10278637 tagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagtcttt 10278545  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 1837594 - 1837508
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| ||||||||||||| ||||||||| ||||| || || |||||||||||| ||||||||  || ||||||||| |||||||    
T  1837594 tagtttagggacaattttgttcgatttaaaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 1837508  T

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Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 16299139 - 16299224
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||||||| ||||||||  ||| |||||| ||||||| ||||||| |||||| |||||||||||| || ||||||||||||||    
T  16299139 tagtttaaggacgattttgttcaattaaaaaaa-ataggaccattttcgcgagttgatcaaaatggtaggacaaaaagtataattaa 16299224  T

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Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 29439019 - 29438933
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | |||||||||||||||||||||  || ||||||||| |||||||    
T  29439019 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 29438933  T

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Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 44954683 - 44954769
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||  ||||||||||||||||||||| || || ||||||| ||||||||||||||||  || ||||||||| |||||||    
T  44954683 tagtttatggatgattttgtttgatttaaaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaa 44954769  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 52335967 - 52336053
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||||||| || |||||| | |||| |||||||||||||||| ||||||||||||  |||||||    
T  52335967 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaaaatgatagaaccaaaagagtaattaa 52336053  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 37505524 - 37505610
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||||| ||||||| ||||| || || ||||||||||||||||||||   || ||||||| |||||||||    
T  37505524 tagtttatggacgattttgtttgttttaaaagagatatgatcaatttcgtgagttggtcaaaataaaaggaccaaaaatataattaa 37505610  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 44954312 - 44954250
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatgg 89  Q
    ||||| ||| |||||||| |||||||||||| || ||| ||||||||||||||||||||||||    
T  44954312 tttaaagacgattttgttggatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgg 44954250  T

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Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 50304528 - 50304442
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||  ||| |||||||| ||||||||| || || ||| |||||||||||||||||||||||  || ||||||||| |||||||    
T  50304528 tagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 50304442  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 23340259 - 23340208
Alignment:
Q  38 attttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatg 88  Q
    |||||||| ||||||||| ||||||||| | |||||||||||||||||||||    
T  23340259 attttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatg 23340208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 2868173 - 2868251
Alignment:
Q  33 ggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||| |||||||| ||||||||| || |||||| ||||||||| |||||||||||||  || | ||||||| |||||||    
T  2868173 ggacgattttgttcgatttaaaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaa 2868251  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 39485154 - 39485068
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| |||||||| ||||| ||| || |||||| ||||||||||| | |||||||||  || ||||||||| |||||||    
T  39485154 tagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaa 39485068  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 45048244 - 45048158
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    ||||||| |||| ||||||||  |||||||| || ||| || |||||||| ||||||||||||||  || ||||||||| |||||||    
T  45048244 tagtttatggacgattttgttcaatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 45048158  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 44582133 - 44582060
Alignment:
Q  38 attttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||||||||| || |||||| | |||||| ||||||||||||||  || ||||||||| |||||||    
T  44582133 attttgttcgatttaaaagaggtaggaccaatttcgttagttggtcaaaatgtaaggaccaaaagtgtaattaa 44582060  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 4080110 - 4080026
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagtataatt 108  Q
    ||||||| |||| |||||||| ||||||||| || || || || ||||||||||||||||| |||  || ||||||||| |||||    
T  4080110 tagtttagggacgattttgttcgatttaaaataggtacgatcaatttcgtgagttggtcaagatgcaaggaccaaaagtgtaatt 4080026  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 16298771 - 16298707
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatg 88  Q
    ||||||| |||| |||||||| ||||||||| || || ||| | |||||||||||||||||||||    
T  16298771 tagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatg 16298707  T

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Target: scaffold0097 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 46725 - 46811
Alignment:
Q  25 tagtttaaggacaattttgtttgatttaaaaaagataggac-attttcgtgagttggtcaaaatggtagaaccaaaagtataattaa 110  Q
    |||||||| ||| |||||||| ||||||||| | ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  46725 tagtttaaagacgattttgttcgatttaaaatatataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 46811  T

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Target: scaffold0712 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 6478 - 6403
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagt 102  Q
    ||||||||| |||||||| |||||||||||||||| | ||||||| ||||||| |||||||||||| |||||||||    
T  6478 tttaaggacgattttgttcgatttaaaaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagt 6403  T

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Target: scaffold0709 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 6496 - 6421
Alignment:
Q  28 tttaaggacaattttgtttgatttaaaaaagatagga-cattttcgtgagttggtcaaaatggtagaaccaaaagt 102  Q
    ||||||||| |||||||| |||||||||||||||| | ||||||| ||||||| |||||||||||| |||||||||    
T  6496 tttaaggacgattttgttcgatttaaaaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagt 6421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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