View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9666_high_9 (Length: 241)
Name: NF9666_high_9
Description: NF9666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9666_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 7478283 - 7478496
Alignment:
| Q |
11 |
tttcgtgttaattatatacattcaacgacgtaaccccatcaacaactaagtgtttttcatttggactcgaattctagagccaaatgatctaagtttagtt |
110 |
Q |
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| T |
7478283 |
tttcgtgttaattatatacattcaacgacataactccatcaacaaccaagtgtttttcatttgaactcgaattcgagagccaaatgatctaagtttagtt |
7478382 |
T |
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| Q |
111 |
tcacctggagtttaaatttgattaataactaggataaaaatgtagcttttgattcggatatgaccataataatgaaattgcaaaggagcaagcaaacatc |
210 |
Q |
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|||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7478383 |
tcacctggagtttaaatttgattaatcactaagataaaaatgtagcttttgattcggatatgaccataataatgaaattgcaaaggagcaagcaaacatc |
7478482 |
T |
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| Q |
211 |
atagcatgattctt |
224 |
Q |
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|||||||||||||| |
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| T |
7478483 |
atagcatgattctt |
7478496 |
T |
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