View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9666_low_21 (Length: 245)
Name: NF9666_low_21
Description: NF9666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9666_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 38501955 - 38501741
Alignment:
| Q |
26 |
taataatatctaggatgcagttcatattcaataaattgactagtttccgaactaatcctaagtatcaaatagagatatcccttacaaatcaaactttaat |
125 |
Q |
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| T |
38501955 |
taataatatctaggatgcggttcatattcaataaattgactagtttccgaactaatcctaagtatcaaatagagatatcccttacaaatcaaactttaat |
38501856 |
T |
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| Q |
126 |
ctttaataaaataaaggagatgatattgatgtaagatcgagaagcaacagtggtcctcttggctgaatgaagagtactcctggtatggcacgttggtaaa |
225 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
38501855 |
ctttaataaaataaaggagatgatattgatgtaagaccgagaagcaacagtggtcctcttggcagaatgaagagtactcctggtatggcacgttggtaaa |
38501756 |
T |
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| Q |
226 |
cctatgcttctcctc |
240 |
Q |
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|||||| | |||||| |
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| T |
38501755 |
cctatggtgctcctc |
38501741 |
T |
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