View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9667_low_30 (Length: 336)
Name: NF9667_low_30
Description: NF9667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9667_low_30 |
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Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 29933244 - 29933516
Alignment:
| Q |
17 |
aaattttgtattcgtcacaaagggaagaagaaaggtagtggaaggtctcaacaatgtggttttgttactttccatgtttaattattcgttaaattagtga |
116 |
Q |
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| T |
29933244 |
aaattttgtattcgtcacaaagggaagaagaaaggtagtggaaggtctcaacaatgtggttttgttgctttccatgtttaattattcgttaaattagtga |
29933343 |
T |
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| Q |
117 |
ttgattagtacttactacaaagttggaattgaaaatgttagcagccactagctttttggaattttctcttccttgatcccattcttaattataagattct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29933344 |
ttgattagtacttactacaaagttggaattgaaaatgttagcagccactagctttttggaattttctcttccttgatcccattcttaattataagattct |
29933443 |
T |
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| Q |
217 |
ttaaaagatttatttatccttaaatataagatgatccattagattcattttttaaatatatctcgtaggacta |
289 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29933444 |
ttaaaagatttatttatccttaaatataagatgatccattagattcattttttaaatatatctcgtaggacta |
29933516 |
T |
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