View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9667_low_5 (Length: 523)

Name: NF9667_low_5
Description: NF9667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9667_low_5
NF9667_low_5
[»] chr7 (10 HSPs)
chr7 (121-506)||(1320310-1320695)
chr7 (267-517)||(16954315-16954564)
chr7 (277-517)||(8744824-8745064)
chr7 (18-62)||(1320207-1320251)
chr7 (267-356)||(25160478-25160565)
chr7 (267-361)||(6584723-6584815)
chr7 (267-356)||(47326217-47326305)
chr7 (277-517)||(42533422-42533663)
chr7 (279-356)||(10243861-10243936)
chr7 (275-355)||(33434777-33434856)
[»] chr6 (4 HSPs)
chr6 (267-516)||(20701974-20702224)
chr6 (267-355)||(16510626-16510712)
chr6 (121-212)||(9223575-9223668)
chr6 (385-516)||(3880754-3880885)
[»] chr2 (5 HSPs)
chr2 (267-516)||(41086957-41087207)
chr2 (267-363)||(1269142-1269238)
chr2 (267-517)||(37770811-37771064)
chr2 (267-386)||(17105073-17105190)
chr2 (407-465)||(10173802-10173860)
[»] chr5 (6 HSPs)
chr5 (267-517)||(26046134-26046384)
chr5 (267-492)||(7195434-7195661)
chr5 (387-517)||(14302600-14302730)
chr5 (279-364)||(8297148-8297232)
chr5 (124-175)||(24072761-24072813)
chr5 (329-363)||(7392355-7392389)
[»] chr3 (5 HSPs)
chr3 (317-517)||(25647393-25647595)
chr3 (267-492)||(37123051-37123276)
chr3 (333-480)||(14193663-14193812)
chr3 (267-356)||(34476085-34476172)
chr3 (267-356)||(47235377-47235464)
[»] scaffold0119 (1 HSPs)
scaffold0119 (267-363)||(42464-42560)
[»] chr1 (12 HSPs)
chr1 (374-517)||(6583361-6583504)
chr1 (267-364)||(9313552-9313648)
chr1 (278-427)||(10785587-10785737)
chr1 (267-356)||(27101971-27102059)
chr1 (267-356)||(46693151-46693238)
chr1 (433-517)||(52278325-52278409)
chr1 (267-363)||(16147230-16147324)
chr1 (289-355)||(41920163-41920228)
chr1 (435-508)||(16147384-16147457)
chr1 (267-356)||(20113853-20113940)
chr1 (267-356)||(24684808-24684895)
chr1 (267-355)||(31586094-31586180)
[»] chr8 (5 HSPs)
chr8 (267-493)||(17657195-17657425)
chr8 (267-356)||(34389310-34389397)
chr8 (267-356)||(36630499-36630586)
chr8 (267-451)||(10248788-10248971)
chr8 (267-356)||(32066627-32066714)
[»] scaffold0050 (1 HSPs)
scaffold0050 (317-507)||(36414-36608)
[»] chr4 (3 HSPs)
chr4 (267-356)||(8254689-8254776)
chr4 (267-356)||(8268107-8268194)
chr4 (267-355)||(38639744-38639830)


Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 121 - 506
Target Start/End: Original strand, 1320310 - 1320695
Alignment:
Q  121 cggtttgcatgggtgtatgtgggggttatttggtgtggtttggataggtggtcgtagttttggtgtcgaaaactttgtggacgagagctttaacaagggt 220  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| ||||  |||||||||||||||||||||    
T  1320310 cggtttgcgtgggtgtatgtgggg-ttatttggtgtggtttggatgggtggtcgtagttttggtgttgaaaattttgcagacgagagctttaacaagggt 1320408  T
Q  221 gtttggttttgcttgtgtcagaaggtgggtgtttatgtggtgtttatgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttac 320  Q
    | |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  1320409 ggttggttttgcttgtgtcagaaggtgggtctttatgtggtgtttatgaggaggaaggtgtttgttgggggtgatttcttttagaggcagcctattttac 1320508  T
Q  321 acgggtccttgtttcgtcgtcactagctcttgtttgcattttttaggattgttaggtgtttagggt-tttggtggaagtgggtcccgttgagttgagtct 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||    
T  1320509 acgggtccttgtttcgtcgtcactagctcttgtttgcattttttaggattgttaggtgtttatggtgtttggtggaagtgggtcccgttgagctgagtct 1320608  T
Q  420 ttccctttgaatctgtttgttgtttccaccaccgcatatcatgtcggttgccatactttttctgtgttggtttctggtggaccgatt 506  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1320609 ttccctttgaatctgtttgttgtttgcaccaccgcatatcatgtcggttgccatactttttctgtgttggtttccggtggaccgatt 1320695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 267 - 517
Target Start/End: Original strand, 16954315 - 16954564
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttag 366  Q
    |||||||||| ||||||||||||||| ||||| | | ||||||| || | |||| ||||| ||||||| |||||||||| |||| ||||||||||||       
T  16954315 tgaggaggagagtgtttgttgggggtgatttcgtctggaggcagtctttgttactcgggtacttgttt-gtcgtcactatctctagtttgcatttttc-- 16954411  T
Q  367 gattgtta-ggtgtttagggtttt-ggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtc 464  Q
    |||||||| ||||||||||||||| || || || ||||| |||||||||||| |||| |||||| || |||||||||||| |||||| ||||||| ||||    
T  16954412 gattgttaaggtgtttagggtttttggaggtagcgggtctcgttgagttgagccttttcctttggatatgtttgttgtttgcaccactgcatatcttgtc 16954511  T
Q  465 ggttgccatactttttctgtgttggtttctggtggaccgattacctttgcttc 517  Q
    | ||| |||||||  | |||| ||||||| | ||| |||||||| ||||||||    
T  16954512 gtttgtcatacttactgtgtgctggtttccgatgggccgattacttttgcttc 16954564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 277 - 517
Target Start/End: Original strand, 8744824 - 8745064
Alignment:
Q  277 ggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttaggattgtta-g 375  Q
    |||||||||||||||| || |||||| ||||   ||| | |||| ||| |||||||| ||||||||||||| ||||||||| |||||| || |||||| |    
T  8744824 ggtgtttgttgggggtgatctcttttggaggtttcctttgttactcggttccttgtt-cgtcgtcactagcccttgtttgcgttttttcgg-ttgttaag 8744921  T
Q  376 gtgtttagggt-tttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtcggttgccata 474  Q
    ||||||| | | ||||| ||||| | |||  ||||||||||| |||  |||||  |||| |||||||||| |||||||||||||||||||| ||| |||     
T  8744922 gtgtttacgatgtttggaggaagcgagtcttgttgagttgagccttctccttttgatctatttgttgtttgcaccaccgcatatcatgtcgtttgtcatg 8745021  T
Q  475 ctttttctgtgttggtttctggtggaccgattacctttgcttc 517  Q
    |||||| |||| ||||||  ||||| ||| |||| ||||||||    
T  8745022 ctttttgtgtgctggttttcggtgggccggttacttttgcttc 8745064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 1320207 - 1320251
Alignment:
Q  18 atatgtacttatggtgccacctgttttcttggtgaggcggcttag 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  1320207 atatgtacttatggtgccacctgttttcttggtgaggcggcttag 1320251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 25160478 - 25160565
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| ||||||||||||||| | ||||| || | | ||| ||||| |||||||||||| |||| ||||||||||||||||||||||    
T  25160478 tgaggaggcgggtgtttgttgggg-tgatttccttaaaaagcaacctatgttacacgggtccatgtt-cgtcgtcactagctcttgtttg 25160565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 6584723 - 6584815
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattt 361  Q
    ||||||||  |||||||||||||| | ||||||||| |||  ||||| | |||||||||||| || | ||||||| |||||||||||||||||||    
T  6584723 tgaggaggcaggtgtttgttgggg-tgatttcttttggagatagcctctattacacgggtccatgat-cgtcgtcgctagctcttgtttgcattt 6584815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 47326305 - 47326217
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| ||| | |||||| |||| ||||| |||||| ||| ||| | |||||||||||| || |||||||| |||||||||||||||    
T  47326305 tgaggaggtgggcggttgttgtgggtgatttcctttagaagcaacctttgttacacgggtccatg-ttcgtcgttactagctcttgtttg 47326217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 517
Target Start/End: Complemental strand, 42533663 - 42533422
Alignment:
Q  277 ggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttaggattgtt-ag 375  Q
    |||||||||| | ||| ||||||||| |||| ||| | | |||| ||||||| |||| |||||||| | |||||||||||   ||||| || ||||| ||    
T  42533663 ggtgtttgttagaggtgatttcttttggaggtagcatctgttactcgggtccatgtt-cgtcgtcattggctcttgtttgtgattttt-gggttgttaag 42533566  T
Q  376 gtgtttagggt-tttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgttt-gttgtttccaccaccgcatatcatgtcggttgccat 473  Q
    ||||||| |||  |||| ||||| | |||||||||   |||| |||| |||||  || ||||| ||||||| |||||||| || || ||||| ||| |||    
T  42533565 gtgtttaaggtggttggaggaagcgtgtcccgttgttctgagccttttccttttgatttgtttggttgtttgcaccaccgtatctcttgtcgtttgtcat 42533466  T
Q  474 actttttctgtgttggtttctggtggaccgattacctttgcttc 517  Q
    ||||||| |||| |||| || | ||| ||| |||| ||||||||    
T  42533465 actttttgtgtgctggtctccgatgggccggttacttttgcttc 42533422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 10243861 - 10243936
Alignment:
Q  279 tgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||||||| | ||||| |||||| ||| ||| | |||||||||| | |||| ||||||||||||||||||||||    
T  10243861 tgtttgttgggg-tgatttcctttagaagcaacctctgttacacgggtacatgtt-cgtcgtcactagctcttgtttg 10243936  T

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Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 355
Target Start/End: Original strand, 33434777 - 33434856
Alignment:
Q  275 agggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgttt 355  Q
    |||||||||||||||||| ||||| |||  ||||| ||| | |||| ||||||  || ||||||||||||||||| |||||    
T  33434777 agggtgtttgttgggggtgatttcctttgaaggcaacctctgttactcgggtctatg-ttcgtcgtcactagctcctgttt 33434856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 267 - 516
Target Start/End: Complemental strand, 20702224 - 20701974
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttag 366  Q
    |||||||| ||||||||||||||||| ||||||||| |||| ||||| | |||| |||||||||| |||||||||||||| |||||| |||||||||| |    
T  20702224 tgaggaggcgggtgtttgttgggggtgatttcttttggaggtagcctttgttactcgggtccttg-ttcgtcgtcactagttcttgtatgcattttttgg 20702126  T
Q  367 gattgtt-aggtgtttagggt-tttggtggaagtgggtcccgttgagttg-agtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgt 463  Q
    ||||||| ||||||||||||| ||||| ||||| |||||||||||||  | | | ||||| |||| ||||||||||||||| ||| ||||| |||| |||    
T  20702125 gattgttaaggtgtttagggtgtttggaggaagcgggtcccgttgagcggtactttttccgtttg-atctgtttgttgtttgcactaccgcgtatcttgt 20702027  T
Q  464 cggttgccatactttttctgtgttggtttctggtggaccgattacctttgctt 516  Q
     | ||| | |||||||| |||| ||||||| | ||| ||| |||| |||||||    
T  20702026 tgtttgtcctactttttgtgtgatggtttccgatgggccggttacttttgctt 20701974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 355
Target Start/End: Complemental strand, 16510712 - 16510626
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgttt 355  Q
    |||||||| ||||||||||||||| | ||||| ||| |||| | ||| | |||||||||||| |||| |||||||||||||||||||||    
T  16510712 tgaggaggcgggtgtttgttgggg-tgatttcctttggaggaaacctctcttacacgggtccatgtt-cgtcgtcactagctcttgttt 16510626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 9223575 - 9223668
Alignment:
Q  121 cggtttgcatgggtgtatgtgggggttat-ttggtgtggtttggataggtggtcgtagttttggtgtcgaaa-actttgtggacgagagcttta 212  Q
    |||||||| |||||||| || |||||| | ||||| |||||||||| ||||||||| | | ||||||||||| |||| | ||||||||||||||    
T  9223575 cggtttgcgtgggtgtaggtaggggttgtcttggtctggtttggatgggtggtcgtggatctggtgtcgaaacacttggcggacgagagcttta 9223668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 516
Target Start/End: Complemental strand, 3880885 - 3880754
Alignment:
Q  385 gttttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtcggttgccatactttttctgt 484  Q
    |||||||  |||| |||||| |||||||||||  ||| |||||  || | |||||||||| ||||||| |||||||||||  ||| || ||||||| | |    
T  3880885 gttttggaagaagcgggtcctgttgagttgagctttttccttttgatatatttgttgtttgcaccaccacatatcatgtcctttgtcagactttttgttt 3880786  T
Q  485 gttggtttctggtggaccgattacctttgctt 516  Q
    | ||||||| ||||| ||  |||| |||||||    
T  3880785 gctggtttccggtgggccagttacttttgctt 3880754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 7e-35; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 267 - 516
Target Start/End: Complemental strand, 41087207 - 41086957
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttag 366  Q
    |||||||| ||||||||||||||||| ||||||||| ||| |||||| | |||| |||||||||  |||||||| |||||||||||| ||| |||||| |    
T  41087207 tgaggaggcgggtgtttgttgggggtgatttcttttggagtcagcctctgttactcgggtcctt-attcgtcgttactagctcttgtatgcgttttttgg 41087109  T
Q  367 gattgtt-aggtgtttagggt-tttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtc 464  Q
    | ||||| |||||| |||||| ||||| || || ||||||||||||| | || |||| ||| |  |||||||||||| || ||| ||||| |||| ||||    
T  41087108 ggttgttaaggtgtctagggtgtttggaggtagcgggtcccgttgagctaagccttttcctattgatctgtttgttgcttgcactaccgcttatcttgtc 41087009  T
Q  465 ggttgccatactttttctgtgttggtttctggtggaccgattacctttgctt 516  Q
    | ||| | ||||| || ||||  |||||| |||||||||||||| |||||||    
T  41087008 gtttgtcctacttgttgtgtgcaggtttccggtggaccgattacttttgctt 41086957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 267 - 363
Target Start/End: Original strand, 1269142 - 1269238
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttt 363  Q
    |||||||| ||||||||||||||||| ||||||| | ||||  |||| | |||| |||||||||||||||||||||||||||||||||||| |||||    
T  1269142 tgaggaggcgggtgtttgttgggggtgatttcttctggaggttgcctctattactcgggtccttgtttcgtcgtcactagctcttgtttgcgttttt 1269238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 517
Target Start/End: Complemental strand, 37771064 - 37770811
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgc-atttttta 365  Q
    |||||||| |||||||||||| |||| |||||| || ||||| |||| | | || |||||||||| |||||||||||||||| ||||||||  ||||||     
T  37771064 tgaggaggcgggtgtttgttgagggtgatttctgttggaggctgcctctataactcgggtccttg-ttcgtcgtcactagcttttgtttgcgtttttttg 37770966  T
Q  366 ggattgtt-aggtg-tttagggt-tttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatg 462  Q
    || ||||| ||||| |||||||| ||||| |||| ||||||  |||| ||||||  | | |||||  || | || ||||||| |||||||| ||||| ||    
T  37770965 gggttgttaaggtgttttagggtgtttggaggaaatgggtcatgttgtgttgagcttcttccttttgatttattcgttgtttgcaccaccgtatatcttg 37770866  T
Q  463 tcggttgccatactttttctgtgttggtttctggtggaccgattacctttgcttc 517  Q
    ||| ||| ||| |||||| | || |||||   ||||| ||| |||| ||||||||    
T  37770865 tcgtttgtcatgctttttgtttgctggttatcggtgggccggttacttttgcttc 37770811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 267 - 386
Target Start/End: Original strand, 17105073 - 17105190
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttag 366  Q
    |||||||| | ||||||||||||| | ||||| ||| |||||||||| |  ||||| ||||| |||| ||||||||||||||||| |||||| ||||| |    
T  17105073 tgaggaggcgtgtgtttgttgggg-tgatttcctttggaggcagcctctgctacacaggtccatgtt-cgtcgtcactagctcttatttgcacttttttg 17105170  T
Q  367 gattgttaggtgtttagggt 386  Q
    | |  | |||||||||||||    
T  17105171 gctgttaaggtgtttagggt 17105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 10173860 - 10173802
Alignment:
Q  407 ttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtcg 465  Q
    ||||| ||||||||| |||||  || ||||||| |||| ||||||||||||||||||||    
T  10173860 ttgagctgagtcttttccttttgatttgtttgtggtttgcaccaccgcatatcatgtcg 10173802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 9e-28; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 267 - 517
Target Start/End: Complemental strand, 26046384 - 26046134
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttag 366  Q
    |||| ||| ||||||||||||||| | ||||||||| ||| | |||| | |||| |||||||||||| |||| |||||||||||||||||  |||||  |    
T  26046384 tgagtaggcgggtgtttgttggggttgatttcttttggagactgcctctgttactcgggtccttgtt-cgtcttcactagctcttgtttgtgtttttggg 26046286  T
Q  367 gattgttaggtgtttagggt-tttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtcg 465  Q
    |  | ||||||||||||||| ||| | ||||| |||||  ||||   |||| |||   ||||  || |||||||||||| ||||||||||||||||||||    
T  26046285 gtgttttaggtgtttagggtgtttagaggaagcgggtcatgttgcactgagccttcttcttttgatatgtttgttgtttgcaccaccgcatatcatgtcg 26046186  T
Q  466 gttgccatactttttctgtgttggtttctggtggaccgattacctttgcttc 517  Q
     ||| |||||||||| |||| | ||||||||||| | |||||  ||||||||    
T  26046185 tttgtcatactttttgtgtgctagtttctggtgggcagattaattttgcttc 26046134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 492
Target Start/End: Complemental strand, 7195661 - 7195434
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttag 366  Q
    ||||||||  ||||||| |||  ||| |||||||||| || | || ||| |||| ||||||||||||| || ||||||||||||||||| |||| ||| |    
T  7195661 tgaggaggcaggtgtttattgtaggtgatttcttttatagactgcttatgttactcgggtccttgttt-gttgtcactagctcttgtttacattgttttg 7195563  T
Q  367 gattgtt-aggtgtttagggt-tttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtc 464  Q
    | || || ||||||||||||| ||||| ||||| | ||||  ||| | || | |||| |||||  || |||||||||||| |||||||||  ||||| ||    
T  7195562 ggttattaaggtgtttagggtgtttggaggaagcgtgtccttttgtgctgggccttttcctttttatatgtttgttgtttgcaccaccgctcatcatatc 7195463  T
Q  465 -ggttgccatactttttctgtgttggttt 492  Q
       ||| |||||||||| |||||||||||    
T  7195462 attttgtcatactttttgtgtgttggttt 7195434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 517
Target Start/End: Complemental strand, 14302730 - 14302600
Alignment:
Q  387 tttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtcggttgccatactttttctgtgt 486  Q
    ||||| ||||| ||||||||||||||||||  ||| | |||  |||| |||||||||| ||||||  ||||| |||||| ||| ||| |||||| ||||     
T  14302730 tttggaggaagcgggtcccgttgagttgagcattttcgttttgatctatttgttgtttgcaccacatcatattatgtcgtttgtcattctttttgtgtgc 14302631  T
Q  487 tggtttctggtggaccgattacctttgcttc 517  Q
    |||||||||| || ||  |||| ||||||||    
T  14302630 tggtttctgggggccccgttacttttgcttc 14302600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 279 - 364
Target Start/End: Original strand, 8297148 - 8297232
Alignment:
Q  279 tgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcatttttt 364  Q
    ||||||||||| ||||||| |||| ||||  |||| | |||| || ||||||||| |||| |||||||| ||||||||||||||||    
T  8297148 tgtttgttgggagtaatttattttggaggttgcctctgttactcgagtccttgtt-cgtcatcactagcacttgtttgcatttttt 8297232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 24072813 - 24072761
Alignment:
Q  124 tttgcatgggtgtatgtgggggttatt-tggtgtggtttggataggtggtcgt 175  Q
    |||||||||||||| ||||||||| |  |||||||||||||||||||||||||    
T  24072813 tttgcatgggtgtacgtgggggttgtcatggtgtggtttggataggtggtcgt 24072761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 7392389 - 7392355
Alignment:
Q  329 ttgtttcgtcgtcactagctcttgtttgcattttt 363  Q
    ||||||||||||||||||||||||||||| |||||    
T  7392389 ttgtttcgtcgtcactagctcttgtttgcgttttt 7392355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 517
Target Start/End: Original strand, 25647393 - 25647595
Alignment:
Q  317 ttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttaggattgtta-ggtgtttagggt-tttggtggaagtgggtcccgttgagttg 414  Q
    |||| |||||||||||| |||||||||||||||||||| |   |||||| | |||||| |||||||||||| ||||| ||||| | ||||||||||||||    
T  25647393 ttactcgggtccttgtt-cgtcgtcactagctcttgttcgtgatttttaaggttgttaaggtgtttagggtgtttggaggaagcgagtcccgttgagttg 25647491  T
Q  415 agtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtcggttgccatac-tttttctgtgttggtttctggtggaccgattacctttg 513  Q
     | |||| |||||  | ||||||||||||| |||||| | ||||||||||| ||| ||| | ||||| |||||||||||| | ||| ||| |||| ||||    
T  25647492 tgccttttccttttgacctgtttgttgtttgcaccactgtatatcatgtcgtttgtcattcttttttgtgtgttggtttccgatgggccggttacttttg 25647591  T
Q  514 cttc 517  Q
    ||||    
T  25647592 cttc 25647595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 492
Target Start/End: Original strand, 37123051 - 37123276
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttag 366  Q
    ||||||||  ||||||||||| |||| ||||||||  ||||| |||| |  ||| |||||||||||| ||||||||||||||||||||||  |||||| |    
T  37123051 tgaggaggcaggtgtttgttgagggtgatttctttcggaggcggcctctggtactcgggtccttgtt-cgtcgtcactagctcttgtttgtgttttttgg 37123149  T
Q  367 gattgtt-aggtgtttagggt-tttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtc 464  Q
    | ||||| ||| ||||||||| ||||| ||||| |||| || ||||||||||||||| |||||  ||||| | ||||||| ||||  |||| |||||| |    
T  37123150 ggttgttaaggagtttagggtgtttggaggaagcgggttccattgagttgagtcttttccttttgatctgctggttgtttgcaccttcgcacatcatg-c 37123248  T
Q  465 ggttgccatactttttctgtgttggttt 492  Q
      ||| |||||||||| |||| ||||||    
T  37123249 atttgtcatactttttgtgtgctggttt 37123276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 480
Target Start/End: Original strand, 14193663 - 14193812
Alignment:
Q  333 ttcgtcgtcactagctcttgtttgcattttttaggattgtta-ggtgtttagggtttt-ggtggaagtgggtcccgttgagttgagtctttccctttgaa 430  Q
    |||||||||||||||||||||| ||  ||||| || |||||| ||||||||||||||| || ||||| | |||||||||||||| | |||| |||||  |    
T  14193663 ttcgtcgtcactagctcttgttcgcgatttttggggttgttaaggtgtttagggtttttggaggaagcgagtcccgttgagttgtgccttttccttttga 14193762  T
Q  431 tctgtttgttgtttccaccaccgcatatcatgtcggttgccatacttttt 480  Q
    |  |||| |||||| |||||||| |||||| |||| ||| ||| ||||||    
T  14193763 ttcgtttcttgtttacaccaccgtatatcaagtcgtttgtcattcttttt 14193812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 34476172 - 34476085
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| ||||||||||||||| | ||||| || | | ||| ||||| |||||||||||| |||| ||||||| ||||||||||||||    
T  34476172 tgaggaggggggtgtttgttgggg-tgatttccttaaaaagcaacctatgttacacgggtccatgtt-cgtcgtctctagctcttgtttg 34476085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 47235377 - 47235464
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| ||||||| ||||||| | ||||| |||||| ||| ||| | |||||||||||| || ||| ||||| ||||||||||||||    
T  47235377 tgaggaggtgggtgttggttgggg-tgatttcctttagaagcaacctttgttacacgggtccatg-ttcatcgtctctagctcttgtttg 47235464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 267 - 363
Target Start/End: Complemental strand, 42560 - 42464
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttt 363  Q
    |||||||| ||||||||||||||||| ||||||| | ||||  |||| | |||| |||||||||||||||||||||||||||||||||||| |||||    
T  42560 tgaggaggcgggtgtttgttgggggtgatttcttctggaggttgcctctattactcgggtccttgtttcgtcgtcactagctcttgtttgcgttttt 42464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 8e-19; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 517
Target Start/End: Complemental strand, 6583504 - 6583361
Alignment:
Q  374 aggtgtttagggt-tttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtcggttgcca 472  Q
    ||||||||||||| ||||  ||||||||||| ||||| ||||||| |||  ||||  ||| ||||||||||| ||||||||||||||| ||| |||| ||    
T  6583504 aggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagtttttttcttttgatcagtttgttgtttgcaccaccgcatatcacgtc-gttgtca 6583406  T
Q  473 tactttttctgtgttggtttctggtggaccgattacctttgcttc 517  Q
    |||||||| ||||||||||   ||||| ||| |||| ||||||||    
T  6583405 tactttttgtgtgttggttgtcggtgggccggttacttttgcttc 6583361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 267 - 364
Target Start/End: Complemental strand, 9313648 - 9313552
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcatttttt 364  Q
    |||||||||||| ||||||||||||| |||||||||  ||||||||| | ||||  |||||||||||| ||||||| |||||||||| ||| ||||||    
T  9313648 tgaggaggagggcgtttgttgggggtgatttcttttgaaggcagcctttgttacttgggtccttgttt-gtcgtcaatagctcttgtatgcgtttttt 9313552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 427
Target Start/End: Complemental strand, 10785737 - 10785587
Alignment:
Q  278 gtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttaggattgtt-agg 376  Q
    |||||| |||||||| ||||||||| ||||| |||| | ||||  ||||| | ||||||||||||||| | ||||||||||| |||| || ||||| |||    
T  10785737 gtgtttattgggggtgatttcttttggaggctgcctctgttacttgggtcttggtttcgtcgtcactaacccttgtttgcat-ttttggggttgttaagg 10785639  T
Q  377 tgtttagggt-tttggtggaagtgggtcccgttgagttgagtctttcccttt 427  Q
    |||||||||| ||||| || ||  |||||| ||||| |||| |||| |||||    
T  10785638 tgtttagggtgtttggagggagcaggtcccattgagctgagccttttccttt 10785587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 27101971 - 27102059
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| |||||| ||||| ||||| |||||||| ||||| |||| | |||| ||||||||| || ||||||||| ||||||||||||    
T  27101971 tgaggaggcgggtgtctgttgagggtattttcttttggaggcggcctctgttactcgggtccttctt-cgtcgtcacgagctcttgtttg 27102059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 46693238 - 46693151
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| ||||||||||||||| | ||||| |||||| ||| ||| | |||||||||| | |||| ||||||||||||||||||||||    
T  46693238 tgaggaggtgggtgtttgttgggg-tgatttcctttagaagcaacctctgttacacgggtacatgtt-cgtcgtcactagctcttgtttg 46693151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 517
Target Start/End: Original strand, 52278325 - 52278409
Alignment:
Q  433 tgtttgttgtttccaccaccgcatatcatgtcggttgccatactttttctgtgttggtttctggtggaccgattacctttgcttc 517  Q
    |||||||||||| ||||||||| |||||||||| ||| | | ||| ||  ||||||||||  |||||||||||||| ||||||||    
T  52278325 tgtttgttgttttcaccaccgcttatcatgtcgtttgtcttgcttattgcgtgttggttttcggtggaccgattacttttgcttc 52278409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 363
Target Start/End: Original strand, 16147230 - 16147324
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttt 363  Q
    |||||||| |||||||  |||||| | ||||| ||| |||||||||| | ||||||||| || |||| ||||||||||||||||| ||||| |||||    
T  16147230 tgaggaggtgggtgttgcttgggg-tgatttcctttggaggcagcctctgttacacgggcccatgtt-cgtcgtcactagctcttatttgcgttttt 16147324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 41920163 - 41920228
Alignment:
Q  289 gggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgttt 355  Q
    |||| ||||| |||||| ||| ||| | |||||||||||| |||| |||||||||||||||||||||    
T  41920163 gggtgatttcctttagaagcaacctctattacacgggtccatgtt-cgtcgtcactagctcttgttt 41920228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 508
Target Start/End: Original strand, 16147384 - 16147457
Alignment:
Q  435 tttgttgtttccaccaccgcatatcatgtcggttgccatactttttctgtgttggtttctggtggaccgattac 508  Q
    |||||||||| |||||||||||||||||||  ||| | ||||| || |||||| | ||| ||||| ||||||||    
T  16147384 tttgttgtttgcaccaccgcatatcatgtcatttgtcttacttattgtgtgttaggttccggtgggccgattac 16147457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 20113940 - 20113853
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| | ||| ||||||||| | ||||| |||||| ||| ||||| |||||||||| | |||| ||||||| ||||||||||||||    
T  20113940 tgaggaggcgagtgcttgttgggg-tgatttcctttagaagcaacctatgttacacgggttcatgtt-cgtcgtctctagctcttgtttg 20113853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 24684895 - 24684808
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| ||||| ||||||||| | || || ||| || ||| ||||| ||||| ||||||||||| | ||||||||||||||||||||    
T  24684895 tgaggaggcgggtggttgttgggg-tgatgtcctttggaagcaacctatgttacatgggtccttgtt-catcgtcactagctcttgtttg 24684808  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 355
Target Start/End: Complemental strand, 31586180 - 31586094
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgttt 355  Q
    |||||||| ||||| ||||||||| | ||||| |||||| | | ||| | |||||||||||| |||| |||||||||| ||||||||||    
T  31586180 tgaggaggtgggtgcttgttgggg-tgatttcctttagaagaaacctctgttacacgggtccatgtt-cgtcgtcactggctcttgttt 31586094  T

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Target: chr8 (Bit Score: 44; Significance: 8e-16; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 267 - 493
Target Start/End: Complemental strand, 17657425 - 17657195
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttag 366  Q
    |||||||| || |||| ||||| ||| |||| |||| ||||| |||| | |||  ||||||||||||| || |||||||||||||||||||||||||  |    
T  17657425 tgaggaggcggatgttcgttggaggtgatttgttttggaggctgcctctgttattcgggtccttgttt-gttgtcactagctcttgtttgcatttttg-g 17657328  T
Q  367 gattgtta-ggtgtttagggt-tttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtc 464  Q
    || ||||| |||||||| ||| ||||| ||||| || |||||||||  ||||  |||  ||||  |||| |||||||| | | |||||| ||||||||||    
T  17657327 gactgttaaggtgtttatggtgtttggaggaagcggatcccgttgaactgagagtttttcttttgatctatttgttgtgtgctccaccgtatatcatgtc 17657228  T
Q  465 ggt----tgccatactttttctgtgttggtttc 493  Q
    | |    || |||||||||| ||||||||||||    
T  17657227 gatcgtttgtcatactttttgtgtgttggtttc 17657195  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 34389397 - 34389310
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| ||||| ||||||||| | ||||| |||||| ||| ||| | |||||||||||| |||| ||||||||||||||||||||||    
T  34389397 tgaggaggcgggtgcttgttgggg-tgatttcctttagaagcaacctctgttacacgggtccatgtt-cgtcgtcactagctcttgtttg 34389310  T

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Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 36630499 - 36630586
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| ||||| ||||||||| | ||||| ||| || ||| ||| | ||||||||||||||||| ||||||||||||||||||||||    
T  36630499 tgaggaggcgggtgcttgttgggg-tgatttcctttggaagcaacctctgttacacgggtccttgtt-cgtcgtcactagctcttgtttg 36630586  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 451
Target Start/End: Complemental strand, 10248971 - 10248788
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttag 366  Q
    |||||||||||||||||| ||||| | ||||||| | ||||  | |  | |||| ||||||||| || |||||||||||||||||||||| | ||||| |    
T  10248971 tgaggaggagggtgtttgctgggg-tgatttcttctggaggttgtcgctgttactcgggtccttatt-cgtcgtcactagctcttgtttg-agttttttg 10248875  T
Q  367 gattgtt-aggtgtttagggt-tttggtggaagtgggtcccgttgagttgagtctttccctttgaatctgtttgttgtttccaccac 451  Q
    ||||||| ||||||||| ||| ||||| || ||  |||||||||||| | ||||| | |||||  ||  ||||||||||| ||||||    
T  10248874 gattgttaaggtgtttaaggtgtttggagggagcaggtcccgttgagcttagtctattccttttgattggtttgttgtttgcaccac 10248788  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 32066714 - 32066627
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| ||||||||||||||| | ||||| |||||| ||| ||| | ||||| |||| | |||| ||||||||||||||||||||||    
T  32066714 tgaggaggtgggtgtttgttgggg-tgatttcctttagaagcaacctctgttacatgggtacatgtt-cgtcgtcactagctcttgtttg 32066627  T

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Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 507
Target Start/End: Original strand, 36414 - 36608
Alignment:
Q  317 ttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttagga-ttgtta-ggtgttt-agggt-tttggtggaagtgggtcccgttgagt 412  Q
    |||| |||||||||||| |||||||| |||||||||||  | |||||| ||  |||||| ||||||| ||||| ||| | ||||| || || |||||||     
T  36414 ttactcgggtccttgtt-cgtcgtcagtagctcttgttcacgtttttttggggttgttaaggtgttttagggtgtttagaggaagcggatctcgttgagc 36512  T
Q  413 tgagtctttccctttgaatctgtttgttgtttccaccaccgcatatcatgtcggttgccatac-tttttctgtgttggtttctggtggaccgatta 507  Q
    || | |||| |||||  || |||||||||||| |||||||||||||||||||  ||| ||| | ||||| |||||||||||| ||||| |||||||    
T  36513 tgtgacttttccttttgatatgtttgttgtttgcaccaccgcatatcatgtcatttgtcattcttttttgtgtgttggtttccggtgggccgatta 36608  T

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Target: chr4 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 8254689 - 8254776
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| ||||| |||||||||  | |||||||  || ||| ||| | |||||||||||| |||| ||||||||||||||||||||||    
T  8254689 tgaggaggcgggtgcttgttggggagattttctttg-gaagcaacctttgttacacgggtccatgtt-cgtcgtcactagctcttgtttg 8254776  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 8268107 - 8268194
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttg 356  Q
    |||||||| ||||| |||||||||  | |||||||  || ||| ||| | |||||||||||| |||| ||||||||||||||||||||||    
T  8268107 tgaggaggcgggtgcttgttggggagattttctttg-gaagcaacctttgttacacgggtccatgtt-cgtcgtcactagctcttgtttg 8268194  T

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Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 355
Target Start/End: Complemental strand, 38639830 - 38639744
Alignment:
Q  267 tgaggaggagggtgtttgttgggggtaatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgttt 355  Q
    |||||||| || |||||||||| ||| |||||| | |||||| |||| | |||| ||| |||||||| ||||||||||| |||||||||    
T  38639830 tgaggaggtggatgtttgttggaggtgatttctgt-agaggctgcctctgttactcggatccttgtt-cgtcgtcactaactcttgttt 38639744  T

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