View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9669_high_11 (Length: 355)
Name: NF9669_high_11
Description: NF9669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9669_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 20 - 340
Target Start/End: Original strand, 44112931 - 44113247
Alignment:
| Q |
20 |
tctgacaattcagattttacattaattggcaaacttcataagttttttaattaacgcatattgaagaacaggttcataacacaattattcaggtgacacc |
119 |
Q |
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| T |
44112931 |
tctgacaattcagattttacattaattggcaaacttcataagatttttaattaacgcatattgaagaacaagttcataacacaattattcaggtgacacc |
44113030 |
T |
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| Q |
120 |
acccacgatcaaaagcagaacattagacagacagactcttgcaatgtactgattgtatataacgaagacaaagattttaatgcaaagctaaactcttgat |
219 |
Q |
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| T |
44113031 |
acccacgatcaaaaacagaacattagac----agactcttgcaatgtactgattgtatataatgaagacaaagattttaatgcaaagctaaactcttgat |
44113126 |
T |
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| Q |
220 |
atttaaattataaacccttatttgtatgtgtttaggcaacctgttgaaaagcaatactgttatgtaaaccattgtgttcatggtataaatgtttaaatat |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |
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| T |
44113127 |
atttaaattataaacccttatttgtatgtgtttaggcaacctgttgaaaagcaatattgttatgtaaaccattgtgttcattgtataaatgtttaaatat |
44113226 |
T |
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| Q |
320 |
aatttttgttcaattgagtat |
340 |
Q |
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||||||||||||||||||||| |
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| T |
44113227 |
aatttttgttcaattgagtat |
44113247 |
T |
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