View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9669_high_19 (Length: 217)

Name: NF9669_high_19
Description: NF9669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9669_high_19
NF9669_high_19
[»] chr7 (37 HSPs)
chr7 (108-189)||(31448862-31448943)
chr7 (1-42)||(3904477-3904518)
chr7 (1-42)||(9698537-9698578)
chr7 (111-164)||(31460323-31460376)
chr7 (1-41)||(3872187-3872227)
chr7 (1-41)||(6849211-6849251)
chr7 (1-41)||(18217928-18217968)
chr7 (1-41)||(22486493-22486533)
chr7 (1-41)||(23539331-23539371)
chr7 (1-41)||(28800977-28801017)
chr7 (1-42)||(1842993-1843034)
chr7 (1-42)||(11036606-11036647)
chr7 (1-42)||(33427788-33427829)
chr7 (1-41)||(1907454-1907494)
chr7 (1-41)||(7733312-7733352)
chr7 (1-41)||(21917334-21917374)
chr7 (1-41)||(23232138-23232178)
chr7 (1-41)||(23699825-23699865)
chr7 (1-41)||(23750736-23750776)
chr7 (1-41)||(27806117-27806157)
chr7 (1-41)||(31425511-31425551)
chr7 (1-44)||(20429564-20429607)
chr7 (1-43)||(15014403-15014445)
chr7 (1-43)||(37135283-37135325)
chr7 (8-41)||(687972-688005)
chr7 (1-42)||(20174119-20174160)
chr7 (1-42)||(48933235-48933276)
chr7 (1-41)||(2093362-2093402)
chr7 (1-41)||(21623120-21623159)
chr7 (1-41)||(24605937-24605977)
chr7 (1-41)||(47523650-47523690)
chr7 (1-43)||(2650826-2650868)
chr7 (1-42)||(1824199-1824240)
chr7 (1-42)||(4514864-4514905)
chr7 (1-42)||(42926418-42926459)
chr7 (1-37)||(2457767-2457803)
chr7 (1-41)||(23577189-23577229)
[»] chr6 (45 HSPs)
chr6 (1-44)||(24661006-24661049)
chr6 (1-43)||(28365010-28365052)
chr6 (1-42)||(1939241-1939282)
chr6 (1-41)||(6598563-6598603)
chr6 (1-41)||(6605496-6605536)
chr6 (1-41)||(9893062-9893102)
chr6 (1-41)||(15448484-15448524)
chr6 (1-41)||(26224527-26224567)
chr6 (1-41)||(30833960-30834000)
chr6 (1-40)||(5360508-5360547)
chr6 (1-44)||(15961404-15961447)
chr6 (1-40)||(27796835-27796874)
chr6 (2-45)||(33191180-33191223)
chr6 (1-43)||(12160845-12160887)
chr6 (1-42)||(15364457-15364498)
chr6 (1-42)||(21990174-21990215)
chr6 (1-42)||(22579348-22579389)
chr6 (1-41)||(495627-495667)
chr6 (1-41)||(2669408-2669448)
chr6 (1-41)||(16250802-16250842)
chr6 (1-41)||(20182244-20182284)
chr6 (1-41)||(22153707-22153747)
chr6 (1-45)||(28668199-28668243)
chr6 (1-42)||(5250238-5250279)
chr6 (1-42)||(11049750-11049791)
chr6 (1-38)||(21141038-21141075)
chr6 (1-38)||(25398101-25398138)
chr6 (4-44)||(6978379-6978419)
chr6 (1-41)||(9885342-9885382)
chr6 (1-41)||(12200793-12200833)
chr6 (1-41)||(14036711-14036751)
chr6 (1-41)||(15509255-15509295)
chr6 (2-41)||(2992715-2992754)
chr6 (1-40)||(10458863-10458902)
chr6 (1-44)||(33250705-33250748)
chr6 (1-43)||(8844166-8844208)
chr6 (1-43)||(18492468-18492510)
chr6 (2-35)||(5192195-5192228)
chr6 (1-42)||(22083937-22083978)
chr6 (1-37)||(12157380-12157416)
chr6 (1-41)||(12951807-12951847)
chr6 (1-41)||(13251379-13251419)
chr6 (1-41)||(14886660-14886700)
chr6 (1-41)||(18033526-18033566)
chr6 (1-41)||(26939686-26939726)
[»] chr8 (51 HSPs)
chr8 (1-43)||(19240964-19241006)
chr8 (1-43)||(19314148-19314190)
chr8 (1-42)||(19488060-19488101)
chr8 (2-43)||(27869336-27869377)
chr8 (1-42)||(30466953-30466994)
chr8 (1-41)||(4331075-4331115)
chr8 (1-41)||(8555304-8555344)
chr8 (1-41)||(11938841-11938881)
chr8 (1-41)||(24193196-24193236)
chr8 (1-41)||(24576024-24576064)
chr8 (1-41)||(25274694-25274734)
chr8 (1-41)||(27910764-27910804)
chr8 (1-41)||(27957183-27957223)
chr8 (1-41)||(29351021-29351061)
chr8 (2-41)||(8824923-8824962)
chr8 (1-44)||(19256309-19256352)
chr8 (1-42)||(3823230-3823271)
chr8 (1-42)||(4647754-4647795)
chr8 (1-42)||(30688033-30688074)
chr8 (1-42)||(33652664-33652705)
chr8 (1-41)||(16061939-16061979)
chr8 (1-41)||(17810395-17810435)
chr8 (1-41)||(25273328-25273368)
chr8 (1-41)||(25655858-25655898)
chr8 (1-41)||(32248006-32248046)
chr8 (1-44)||(10917924-10917967)
chr8 (1-44)||(21350575-21350618)
chr8 (1-44)||(23752283-23752326)
chr8 (1-39)||(9915043-9915081)
chr8 (1-43)||(15251698-15251740)
chr8 (1-43)||(18010058-18010100)
chr8 (1-42)||(9631501-9631542)
chr8 (1-42)||(13060930-13060971)
chr8 (1-42)||(32961756-32961797)
chr8 (2-34)||(14304327-14304359)
chr8 (3-43)||(17003361-17003401)
chr8 (1-41)||(17824616-17824656)
chr8 (1-41)||(22939410-22939450)
chr8 (1-41)||(25000431-25000471)
chr8 (1-41)||(29345168-29345208)
chr8 (1-41)||(43431559-43431599)
chr8 (2-41)||(6816383-6816422)
chr8 (1-44)||(24479810-24479853)
chr8 (2-41)||(31399508-31399547)
chr8 (4-43)||(33412975-33413013)
chr8 (1-42)||(24636749-24636791)
chr8 (1-43)||(40289419-40289461)
chr8 (1-42)||(42700656-42700697)
chr8 (1-41)||(6817151-6817191)
chr8 (1-45)||(17103861-17103905)
chr8 (1-41)||(21219240-21219280)
[»] chr2 (33 HSPs)
chr2 (1-47)||(43408505-43408551)
chr2 (1-41)||(12779695-12779735)
chr2 (1-41)||(20065074-20065114)
chr2 (1-41)||(23857958-23857998)
chr2 (1-41)||(37552322-37552362)
chr2 (1-41)||(41736267-41736307)
chr2 (1-41)||(44476375-44476415)
chr2 (1-43)||(13788053-13788095)
chr2 (1-42)||(32009048-32009089)
chr2 (1-41)||(7093663-7093703)
chr2 (1-41)||(15636735-15636775)
chr2 (1-41)||(21293711-21293751)
chr2 (1-41)||(22140364-22140404)
chr2 (1-41)||(27039908-27039948)
chr2 (1-41)||(32185927-32185967)
chr2 (6-42)||(44723032-44723068)
chr2 (3-42)||(26243320-26243359)
chr2 (1-40)||(28319580-28319619)
chr2 (4-42)||(28841341-28841379)
chr2 (1-34)||(1141631-1141664)
chr2 (1-34)||(32300546-32300579)
chr2 (2-43)||(36550931-36550972)
chr2 (1-41)||(8430391-8430431)
chr2 (1-41)||(18551253-18551293)
chr2 (1-41)||(41637713-41637753)
chr2 (1-44)||(14757118-14757161)
chr2 (1-40)||(23388379-23388418)
chr2 (4-41)||(16098917-16098954)
chr2 (1-41)||(13613093-13613133)
chr2 (1-41)||(22192274-22192314)
chr2 (2-38)||(28262460-28262496)
chr2 (1-41)||(29749403-29749443)
chr2 (1-41)||(37723992-37724032)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-42)||(14989-15030)
[»] scaffold0023 (1 HSPs)
scaffold0023 (2-43)||(39701-39742)
[»] chr5 (38 HSPs)
chr5 (1-42)||(16121838-16121879)
chr5 (1-41)||(12045826-12045866)
chr5 (1-41)||(36196493-36196533)
chr5 (1-41)||(38837671-38837711)
chr5 (1-44)||(7003727-7003770)
chr5 (1-42)||(618393-618434)
chr5 (1-42)||(746867-746908)
chr5 (2-43)||(19890984-19891025)
chr5 (1-42)||(35620343-35620384)
chr5 (1-42)||(40484143-40484184)
chr5 (1-41)||(4125188-4125228)
chr5 (1-41)||(5982745-5982785)
chr5 (1-41)||(7888896-7888936)
chr5 (1-41)||(8108860-8108900)
chr5 (5-41)||(13974078-13974114)
chr5 (1-41)||(15061072-15061112)
chr5 (1-41)||(16631874-16631914)
chr5 (1-45)||(17039627-17039671)
chr5 (1-41)||(29727895-29727935)
chr5 (2-41)||(36716200-36716239)
chr5 (4-42)||(12328225-12328263)
chr5 (3-41)||(26708585-26708623)
chr5 (3-41)||(26978319-26978357)
chr5 (1-42)||(10494836-10494877)
chr5 (1-42)||(28265474-28265515)
chr5 (1-41)||(2472714-2472754)
chr5 (1-41)||(8886851-8886891)
chr5 (1-41)||(23409080-23409120)
chr5 (1-41)||(25652583-25652623)
chr5 (5-41)||(36831890-36831926)
chr5 (1-40)||(17771969-17772008)
chr5 (1-32)||(23975734-23975765)
chr5 (1-44)||(33818558-33818601)
chr5 (1-43)||(24138839-24138881)
chr5 (1-42)||(13620126-13620167)
chr5 (1-42)||(25397787-25397828)
chr5 (1-41)||(16464728-16464768)
chr5 (1-41)||(20187941-20187981)
[»] chr4 (39 HSPs)
chr4 (1-42)||(4586757-4586798)
chr4 (1-42)||(13564914-13564955)
chr4 (1-42)||(55309211-55309252)
chr4 (1-41)||(5473946-5473986)
chr4 (1-41)||(7111946-7111986)
chr4 (1-41)||(19839276-19839316)
chr4 (1-41)||(22168365-22168405)
chr4 (1-41)||(27040025-27040065)
chr4 (1-44)||(30268985-30269028)
chr4 (1-44)||(30283161-30283204)
chr4 (1-43)||(32175735-32175777)
chr4 (1-42)||(38619944-38619985)
chr4 (1-42)||(44783580-44783621)
chr4 (1-41)||(9238625-9238665)
chr4 (1-41)||(9670479-9670519)
chr4 (1-41)||(38645847-38645887)
chr4 (1-41)||(45091358-45091398)
chr4 (1-40)||(4627079-4627118)
chr4 (1-44)||(13028813-13028856)
chr4 (1-44)||(46286226-46286269)
chr4 (2-44)||(12072060-12072102)
chr4 (8-41)||(42055501-42055534)
chr4 (1-42)||(45532578-45532619)
chr4 (1-41)||(18714999-18715039)
chr4 (1-41)||(30420033-30420073)
chr4 (1-41)||(54539383-54539423)
chr4 (1-42)||(2275676-2275718)
chr4 (1-43)||(18051936-18051978)
chr4 (1-42)||(4606828-4606869)
chr4 (1-42)||(19680423-19680464)
chr4 (1-42)||(22128311-22128352)
chr4 (1-42)||(25026654-25026695)
chr4 (8-41)||(30508091-30508124)
chr4 (1-41)||(1638544-1638584)
chr4 (1-41)||(8878980-8879020)
chr4 (1-41)||(9058952-9058992)
chr4 (2-42)||(16915467-16915507)
chr4 (1-41)||(29625422-29625462)
chr4 (1-41)||(33914156-33914196)
[»] chr1 (41 HSPs)
chr1 (1-42)||(12369950-12369991)
chr1 (1-42)||(28229454-28229495)
chr1 (1-42)||(46790099-46790140)
chr1 (1-41)||(8940994-8941034)
chr1 (1-41)||(9109975-9110015)
chr1 (1-41)||(12720908-12720948)
chr1 (1-41)||(29549517-29549557)
chr1 (1-44)||(46339442-46339485)
chr1 (4-42)||(6412052-6412090)
chr1 (1-43)||(7181553-7181595)
chr1 (2-44)||(41120734-41120776)
chr1 (4-42)||(51973526-51973564)
chr1 (1-42)||(6459316-6459357)
chr1 (1-41)||(20408160-20408200)
chr1 (1-41)||(45839391-45839431)
chr1 (1-41)||(48522617-48522657)
chr1 (1-41)||(50092298-50092338)
chr1 (2-41)||(22603648-22603687)
chr1 (1-40)||(25787998-25788037)
chr1 (1-43)||(18894898-18894940)
chr1 (1-35)||(46785964-46785998)
chr1 (1-42)||(4340506-4340547)
chr1 (4-41)||(9177202-9177239)
chr1 (1-42)||(17200009-17200050)
chr1 (1-42)||(19865343-19865384)
chr1 (1-42)||(20290320-20290361)
chr1 (1-42)||(50845329-50845370)
chr1 (1-41)||(9985327-9985367)
chr1 (2-34)||(18890556-18890588)
chr1 (1-41)||(22158901-22158941)
chr1 (1-41)||(41752532-41752572)
chr1 (1-41)||(52183777-52183817)
chr1 (1-42)||(14760966-14761007)
chr1 (1-42)||(15243184-15243225)
chr1 (1-42)||(18787912-18787953)
chr1 (1-42)||(23457996-23458037)
chr1 (1-42)||(38531169-38531210)
chr1 (1-42)||(46865342-46865383)
chr1 (1-41)||(12161913-12161953)
chr1 (2-42)||(13195683-13195723)
chr1 (1-41)||(17661149-17661189)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-41)||(22310-22350)
[»] chr3 (57 HSPs)
chr3 (1-41)||(27449183-27449223)
chr3 (1-41)||(43329763-43329803)
chr3 (1-41)||(48404955-48404995)
chr3 (1-40)||(11915853-11915892)
chr3 (2-41)||(26098909-26098948)
chr3 (1-43)||(13921420-13921462)
chr3 (1-42)||(8110434-8110475)
chr3 (1-42)||(9652673-9652714)
chr3 (1-42)||(18104529-18104570)
chr3 (1-42)||(19269863-19269904)
chr3 (1-42)||(25882665-25882706)
chr3 (1-42)||(26390633-26390674)
chr3 (1-41)||(1745488-1745528)
chr3 (1-41)||(3461310-3461350)
chr3 (1-41)||(5261032-5261072)
chr3 (1-41)||(11219233-11219273)
chr3 (1-41)||(18091547-18091587)
chr3 (1-41)||(19223544-19223584)
chr3 (1-41)||(21816816-21816856)
chr3 (1-41)||(29236139-29236179)
chr3 (2-41)||(29956468-29956507)
chr3 (2-41)||(30005623-30005662)
chr3 (1-43)||(5565817-5565859)
chr3 (1-43)||(8546340-8546382)
chr3 (1-39)||(11386430-11386468)
chr3 (1-42)||(1310958-1310999)
chr3 (1-42)||(13905037-13905078)
chr3 (2-42)||(6447245-6447285)
chr3 (1-41)||(7623531-7623571)
chr3 (1-41)||(8428266-8428306)
chr3 (1-41)||(10772053-10772093)
chr3 (1-41)||(10941665-10941705)
chr3 (1-41)||(11007683-11007723)
chr3 (1-41)||(17762737-17762777)
chr3 (1-41)||(18380119-18380159)
chr3 (1-41)||(19064057-19064097)
chr3 (1-41)||(20761950-20761990)
chr3 (1-41)||(21020160-21020200)
chr3 (2-41)||(8543564-8543603)
chr3 (2-41)||(11837214-11837253)
chr3 (6-41)||(17269604-17269639)
chr3 (1-40)||(27969010-27969049)
chr3 (1-32)||(29704041-29704072)
chr3 (1-44)||(46942582-46942625)
chr3 (1-43)||(4393348-4393390)
chr3 (7-45)||(23233180-23233218)
chr3 (1-43)||(27182656-27182698)
chr3 (1-42)||(10803816-10803857)
chr3 (1-42)||(15063991-15064032)
chr3 (1-34)||(18539899-18539932)
chr3 (5-42)||(20088504-20088541)
chr3 (1-42)||(30219433-30219474)
chr3 (1-41)||(6088228-6088268)
chr3 (1-41)||(19610433-19610473)
chr3 (1-41)||(23773572-23773612)
chr3 (1-41)||(46012728-46012768)
chr3 (1-41)||(47263265-47263305)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-40)||(7604-7643)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-44)||(19702-19745)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-44)||(10660-10703)
[»] scaffold0007 (3 HSPs)
scaffold0007 (1-44)||(3841-3884)
scaffold0007 (1-41)||(202873-202913)
scaffold0007 (1-41)||(274665-274705)
[»] scaffold0717 (1 HSPs)
scaffold0717 (1-42)||(917-958)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-42)||(9228-9269)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-42)||(12751-12792)
[»] scaffold0603 (1 HSPs)
scaffold0603 (1-41)||(5979-6019)
[»] scaffold0554 (1 HSPs)
scaffold0554 (2-42)||(9910-9950)
[»] scaffold0062 (1 HSPs)
scaffold0062 (2-42)||(44017-44057)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-41)||(17617-17657)
[»] scaffold0009 (3 HSPs)
scaffold0009 (1-41)||(219735-219775)
scaffold0009 (1-40)||(182629-182668)
scaffold0009 (5-41)||(215663-215699)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-41)||(84402-84442)
scaffold0001 (1-44)||(8107-8150)
scaffold0001 (1-44)||(21839-21882)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-44)||(6894-6937)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-43)||(26582-26624)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-37)||(84678-84714)
[»] scaffold0655 (1 HSPs)
scaffold0655 (1-47)||(3156-3202)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-38)||(74720-74757)
[»] scaffold0087 (1 HSPs)
scaffold0087 (1-41)||(37787-37827)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-41)||(58681-58721)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-41)||(173545-173584)


Alignment Details
Target: chr7 (Bit Score: 58; Significance: 1e-24; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 31448943 - 31448862
Alignment:
Q  108 cattgatagataaaatctaaattattatggaacattgataggtttcttgctcaatattcaaattctcatacccttcattcta 189  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||  | ||||||| ||||||||||    
T  31448943 cattgatagataaaatctaaattattatgaaaaattgataggtttcttgctcaatattcagctcctcatacacttcattcta 31448862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3904518 - 3904477
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3904518 gtcactaatttccctcgctaattttgctttttctagtagtgt 3904477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9698578 - 9698537
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9698578 gtcactaatttccctcgctaattttgctttttctagtagtgt 9698537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 31460376 - 31460323
Alignment:
Q  111 tgatagataaaatctaaattattatggaacattgataggtttcttgctcaatat 164  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  31460376 tgatagataaaatctaaatttttatgaaaaattgataggtttcttgctcaatat 31460323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3872227 - 3872187
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3872227 gtcactaatttccctcgctaattttgctttttctagtagtg 3872187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6849251 - 6849211
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6849251 gtcactaatttccctcgctaattttgctttttctagtagtg 6849211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18217928 - 18217968
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18217928 gtcactaatttccctcgctaattttgctttttctagtagtg 18217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22486493 - 22486533
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22486493 gtcactaatttccctcgctaattttgctttttctagtagtg 22486533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23539331 - 23539371
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23539331 gtcactaatttccctcgctaattttgctttttctagtagtg 23539371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28800977 - 28801017
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28800977 gtcactaatttccctcgctaattttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1842993 - 1843034
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  1842993 gtcactaatttccctcgttaattttgctttttctagtagtgt 1843034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11036606 - 11036647
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  11036606 gtcactaatttcccttgctaattttgctttttctagtagtgt 11036647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33427788 - 33427829
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  33427788 gtcactaatttccctcgctaattttgttttttctagtagtgt 33427829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1907454 - 1907494
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  1907454 gtcactaatttccctcgctaattttgcttttcctagtagtg 1907494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7733352 - 7733312
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  7733352 gtcactaatttccctcgctaatttcgctttttctagtagtg 7733312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21917374 - 21917334
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  21917374 gtcactaatttccctcactaattttgctttttctagtagtg 21917334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23232138 - 23232178
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  23232138 gtcactaatttccctctctaattttgctttttctagtagtg 23232178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23699865 - 23699825
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  23699865 gtcactaatttccctcgctaatttttctttttctagtagtg 23699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23750776 - 23750736
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  23750776 gtcactaatttccctcgctaattttgttttttctagtagtg 23750736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27806117 - 27806157
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  27806117 gtcactaattttcctcgctaattttgctttttctagtagtg 27806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31425551 - 31425511
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  31425551 gtcactaatttccctcgctaattttgctttttctaatagtg 31425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20429564 - 20429607
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  20429564 gtcactaatttcccttgttaattttgctttttctagtagtgtat 20429607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15014445 - 15014403
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  15014445 gtcaccaatttccctcgctaattttactttttctagtagtgta 15014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37135325 - 37135283
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||| ||||||||| ||||||||||||||||    
T  37135325 gtcactaatttccctcactaattttgttttttctagtagtgta 37135283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 687972 - 688005
Alignment:
Q  8 atttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||||||||||||    
T  687972 atttccctcgctaattttgctttttctagtagtg 688005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20174119 - 20174160
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||| || |||||||    
T  20174119 gtcactaatttccctcgctaattttgcttttcctggtagtgt 20174160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 48933235 - 48933276
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||| ||||||||||||||||||||||| ||||||    
T  48933235 gtcactaattttcctcgctaattttgctttttctaatagtgt 48933276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2093402 - 2093362
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  2093402 gtcactaatttccctcgctgatttttctttttctagtagtg 2093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21623120 - 21623159
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  21623120 gtcactaatttccctcgcta-ttttgctttttctagtagtg 21623159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24605937 - 24605977
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  24605937 gtcactaatttccctcgctgatttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47523690 - 47523650
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  47523690 gtcactaatttccctcgctaattttattttttctagtagtg 47523650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2650868 - 2650826
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||| ||||||| |||||||| |||||||||||||||||    
T  2650868 gtcactaaattccctcactaatttttctttttctagtagtgta 2650826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1824240 - 1824199
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||| |||||||||| |||||||||||||| ||||||||||    
T  1824240 gtcacaaatttccctccctaattttgcttttcctagtagtgt 1824199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4514864 - 4514905
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||| |||||||||| |||||||||||||| ||||||||||    
T  4514864 gtcacaaatttccctccctaattttgcttttcctagtagtgt 4514905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42926459 - 42926418
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||| |||||||||||||  |||||||||||||||    
T  42926459 gtcactaattttcctcgctaattttattttttctagtagtgt 42926418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2457767 - 2457803
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagt 37  Q
    |||||||||||||||| |||||||||||||| |||||    
T  2457767 gtcactaatttccctccctaattttgcttttcctagt 2457803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23577229 - 23577189
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||| |||||| ||||| |||||||||||||||    
T  23577229 gtcactaatttctctcgctgatttttctttttctagtagtg 23577189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24661049 - 24661006
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24661049 gtcactaatttccctcgctaattttgctttttctagtagtgtat 24661006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28365010 - 28365052
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28365010 gtcactaatttccctcgctaattttgctttttctagtagtgta 28365052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1939282 - 1939241
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1939282 gtcactaatttccctcgctaattttgctttttctagtagtgt 1939241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6598563 - 6598603
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6598563 gtcactaatttccctcgctaattttgctttttctagtagtg 6598603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6605536 - 6605496
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6605536 gtcactaatttccctcgctaattttgctttttctagtagtg 6605496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9893062 - 9893102
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9893062 gtcactaatttccctcgctaattttgctttttctagtagtg 9893102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15448484 - 15448524
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15448484 gtcactaatttccctcgctaattttgctttttctagtagtg 15448524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26224527 - 26224567
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26224527 gtcactaatttccctcgctaattttgctttttctagtagtg 26224567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30834000 - 30833960
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30834000 gtcactaatttccctcgctaattttgctttttctagtagtg 30833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 5360508 - 5360547
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5360508 gtcactaatttccctcgctaattttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15961447 - 15961404
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  15961447 gtcactaatttccctcgttaattttgctttttctagtagtgtat 15961404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27796874 - 27796835
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27796874 gtcactaatttccctcgctaattttgctttttctagtagt 27796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 33191180 - 33191223
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgtatc 45  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  33191180 tcactaatttccctcgctaattttgctttttctaatagtgtatc 33191223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12160887 - 12160845
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  12160887 gtcactaatttccctcgctaattttactttttctagtagtgta 12160845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15364498 - 15364457
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  15364498 gtcactaatttccctcactaattttgctttttctagtagtgt 15364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21990215 - 21990174
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  21990215 gtcattaatttccctcgctaattttgctttttctagtagtgt 21990174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22579389 - 22579348
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  22579389 gtcactaatttccctcgctaattttgctttttctaatagtgt 22579348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 495667 - 495627
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  495667 gtcactaatttcccttgctaattttgctttttctagtagtg 495627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2669408 - 2669448
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  2669408 gtcactaatttccctcgttaattttgctttttctagtagtg 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16250842 - 16250802
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  16250842 gtcactaatttccctcgttaattttgctttttctagtagtg 16250802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20182244 - 20182284
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  20182244 gtcactaatttccctcgctaattttactttttctagtagtg 20182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22153747 - 22153707
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  22153747 gtcactaatttccctcgctaattttactttttctagtagtg 22153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28668199 - 28668243
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtatc 45  Q
    |||||| |||||||||||||||||| |||||||||||||||||||    
T  28668199 gtcactgatttccctcgctaattttactttttctagtagtgtatc 28668243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5250238 - 5250279
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  5250238 gtcactaatttccctcgctgatttttctttttctagtagtgt 5250279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11049791 - 11049750
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  11049791 gtcactaatttcccttgctaattttgttttttctagtagtgt 11049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21141038 - 21141075
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagta 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  21141038 gtcactaatttccctcgttaattttgctttttctagta 21141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25398101 - 25398138
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagta 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  25398101 gtcactaatttccctcgctaatttttctttttctagta 25398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 6978379 - 6978419
Alignment:
Q  4 actaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  6978379 actaatttccctcgctaattttgcttttcctaatagtgtat 6978419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9885342 - 9885382
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  9885342 gtcactaatttccctccctgattttgctttttctagtagtg 9885382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12200793 - 12200833
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  12200793 gtcactaatttccctcactaattttgctttttctagcagtg 12200833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14036711 - 14036751
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  14036711 gtcactaatttccctcgctaattttcctttttttagtagtg 14036751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15509255 - 15509295
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  15509255 gtcactaatttccctcgctaatttttctttttctggtagtg 15509295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 2992715 - 2992754
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  2992715 tcactaatttccctcgctaattatgcttttcctagtagtg 2992754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10458863 - 10458902
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  10458863 gtcactaatttccctcactaattttactttttctagtagt 10458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33250748 - 33250705
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||    
T  33250748 gtcactaatttccctcgttaattttgtcttttctagtagtgtat 33250705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8844208 - 8844166
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||| || ||||| |||||||||||||||||    
T  8844208 gtcactaatttccctccctgatttttctttttctagtagtgta 8844166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18492468 - 18492510
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||| | |||||||||||||||||||||| ||||||    
T  18492468 gtcactaatttgcatcgctaattttgctttttctagcagtgta 18492510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 5192228 - 5192195
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttcta 35  Q
    |||||||||| |||||||||||||||||||||||    
T  5192228 tcactaattttcctcgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22083937 - 22083978
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||| |||||||||| |||||||||||||| ||||||||||    
T  22083937 gtcacaaatttccctccctaattttgcttttcctagtagtgt 22083978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12157416 - 12157380
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagt 37  Q
    ||||||||||||||||  |||||||||||||||||||    
T  12157416 gtcactaatttccctccttaattttgctttttctagt 12157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12951807 - 12951847
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| |||||||||| |||||||||||||| |||||||||    
T  12951807 gtcacaaatttccctctctaattttgcttttcctagtagtg 12951847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13251419 - 13251379
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||| ||| |||||||||||||||||| |||||    
T  13251419 gtcactaatttctctctctaattttgctttttctattagtg 13251379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14886660 - 14886700
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||| |||| ||||||||||||||||| ||||||    
T  14886660 gtcactaattttcctccctaattttgctttttctggtagtg 14886700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18033566 - 18033526
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| |||||||||| |||||||||||||| |||||||||    
T  18033566 gtcacaaatttccctccctaattttgcttttcctagtagtg 18033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26939686 - 26939726
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||  ||||||| |||||||||||||||    
T  26939686 gtcactaatttccctcagtaattttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19240964 - 19241006
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19240964 gtcactaatttccctcgctaattttgctttttctagtagtgta 19241006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19314148 - 19314190
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19314148 gtcactaatttccctcgctaattttgctttttctagtagtgta 19314190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19488101 - 19488060
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19488101 gtcactaatttccctcgctaattttgctttttctagtagtgt 19488060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 27869336 - 27869377
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27869336 tcactaatttccctcgctaattttgctttttctagtagtgta 27869377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30466994 - 30466953
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30466994 gtcactaatttccctcgctaattttgctttttctagtagtgt 30466953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4331075 - 4331115
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4331075 gtcactaatttccctcgctaattttgctttttctagtagtg 4331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8555344 - 8555304
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8555344 gtcactaatttccctcgctaattttgctttttctagtagtg 8555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11938841 - 11938881
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11938841 gtcactaatttccctcgctaattttgctttttctagtagtg 11938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24193236 - 24193196
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24193236 gtcactaatttccctcgctaattttgctttttctagtagtg 24193196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24576064 - 24576024
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24576064 gtcactaatttccctcgctaattttgctttttctagtagtg 24576024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25274694 - 25274734
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25274694 gtcactaatttccctcgctaattttgctttttctagtagtg 25274734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27910804 - 27910764
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27910804 gtcactaatttccctcgctaattttgctttttctagtagtg 27910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27957223 - 27957183
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27957223 gtcactaatttccctcgctaattttgctttttctagtagtg 27957183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29351021 - 29351061
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29351021 gtcactaatttccctcgctaattttgctttttctagtagtg 29351061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 8824923 - 8824962
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8824923 tcactaatttccctcgctaattttgctttttctagtagtg 8824962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19256309 - 19256352
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  19256309 gtcactaatttccctcgttaattttgctttttctagtagtgtat 19256352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3823230 - 3823271
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  3823230 gtcactaatttccctcgctaattttgctttttctaatagtgt 3823271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4647795 - 4647754
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  4647795 gtcactaatttccctcgctaattttgttttttctagtagtgt 4647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30688033 - 30688074
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  30688033 gtcactgatttccctcgctaattttgctttttctagtagtgt 30688074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33652664 - 33652705
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  33652664 gtcactaatttccctcgctaattttgctttttctggtagtgt 33652705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16061979 - 16061939
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  16061979 gtcactaatttccctcgctaattttactttttctagtagtg 16061939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17810395 - 17810435
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  17810395 gtcactaattttcctcgctaattttgctttttctagtagtg 17810435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25273368 - 25273328
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  25273368 gtcactaatttccctcgttaattttgctttttctagtagtg 25273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25655898 - 25655858
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  25655898 gtcactaatttccctcactaattttgctttttctagtagtg 25655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32248006 - 32248046
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  32248006 gtcactaatttccctcgttaattttgctttttctagtagtg 32248046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10917924 - 10917967
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||| |||||||||| |||||||||||||||||||||||||||    
T  10917924 gtcacaaatttccctccctaattttgctttttctagtagtgtat 10917967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21350575 - 21350618
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  21350575 gtcactaatttcccttgcttattttgctttttctagtagtgtat 21350618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23752326 - 23752283
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||    
T  23752326 gtcactaatatccctcgctaattttgctttttctaatagtgtat 23752283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9915081 - 9915043
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtag 39  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  9915081 gtcactaatttctctcgctaattttgctttttctagtag 9915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15251698 - 15251740
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  15251698 gtcactaatttccctccctaattttgctttttcaagtagtgta 15251740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18010100 - 18010058
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  18010100 gtcactaatttctctcgctaattttgctttttctggtagtgta 18010058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9631501 - 9631542
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  9631501 gtcactaattttccttgctaattttgctttttctagtagtgt 9631542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13060971 - 13060930
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  13060971 gtcactaatttacctcgctaattttgcttttgctagtagtgt 13060930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32961756 - 32961797
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||| ||||||||||||||||||||||||| |||||||||    
T  32961756 gtcactgatttccctcgctaattttgctttttttagtagtgt 32961797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 14304327 - 14304359
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttct 34  Q
    |||||||||||||||||||||||||||||||||    
T  14304327 tcactaatttccctcgctaattttgctttttct 14304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 17003361 - 17003401
Alignment:
Q  3 cactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  17003361 cactaattttcctccctaattttgctttttctagtagtgta 17003401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17824656 - 17824616
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  17824656 gtcacaaatttccctctctaattttgctttttctagtagtg 17824616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22939410 - 22939450
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  22939410 gtcactaatttccttcactaattttgctttttctagtagtg 22939450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25000471 - 25000431
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  25000471 gtcactaatttccctcactaattttactttttctagtagtg 25000431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29345168 - 29345208
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  29345168 gtcactaatttccctccctaatttttctttttctagtagtg 29345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43431599 - 43431559
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  43431599 gtcactaatttccctcactaatttttctttttctagtagtg 43431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 6816422 - 6816383
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  6816422 tcactaatttccctcgctaattatgcttttcctagtagtg 6816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24479853 - 24479810
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  24479853 gtcactaatttccctctctaattatgctttttttagtagtgtat 24479810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 31399547 - 31399508
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  31399547 tcactaatttccctcgttaattttgttttttctagtagtg 31399508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 33413013 - 33412975
Alignment:
Q  4 actaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  33413013 actaatttccctcgctaatttt-ctttttctagtagtgta 33412975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24636749 - 24636791
Alignment:
Q  1 gtcactaatttccctcgctaattttgct-ttttctagtagtgt 42  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  24636749 gtcactaatttccctcgttaattttgctattttctagtagtgt 24636791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40289461 - 40289419
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||| |||||||||||||  ||||||||||||||||    
T  40289461 gtcactaattttcctcgctaattttaatttttctagtagtgta 40289419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42700697 - 42700656
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||| |||| ||||||||||||| ||||||||||||||||    
T  42700697 gtcactgattttcctcgctaattttactttttctagtagtgt 42700656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6817151 - 6817191
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||| |||| ||| |||||||||||||||||||||||||    
T  6817151 gtcactgattttccttgctaattttgctttttctagtagtg 6817191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17103905 - 17103861
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtatc 45  Q
    ||||| |||||| ||| ||||||||| ||||||||||||||||||    
T  17103905 gtcacaaatttctctctctaattttgttttttctagtagtgtatc 17103861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21219280 - 21219240
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||| |||||| ||||| |||||||||||||||    
T  21219280 gtcactaatttctctcgctgatttttctttttctagtagtg 21219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43408551 - 43408505
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtatcga 47  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  43408551 gtcactaatttccctcactaattttgctttttctagtagtgtatcga 43408505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12779695 - 12779735
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12779695 gtcactaatttccctcgctaattttgctttttctagtagtg 12779735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20065114 - 20065074
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20065114 gtcactaatttccctcgctaattttgctttttctagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23857998 - 23857958
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23857998 gtcactaatttccctcgctaattttgctttttctagtagtg 23857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37552322 - 37552362
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37552322 gtcactaatttccctcgctaattttgctttttctagtagtg 37552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41736267 - 41736307
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41736267 gtcactaatttccctcgctaattttgctttttctagtagtg 41736307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44476415 - 44476375
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44476415 gtcactaatttccctcgctaattttgctttttctagtagtg 44476375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13788095 - 13788053
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  13788095 gtcactgatttccctcgctaattttgctttttctagtagtgta 13788053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32009048 - 32009089
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  32009048 gtcactaattttcctcgctaattttgctttttctagtagtgt 32009089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7093663 - 7093703
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  7093663 gtcactaatttccctcgctaattttgcttttactagtagtg 7093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15636775 - 15636735
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15636775 gtcactaatttccctcgctaattttgctttttctggtagtg 15636735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21293751 - 21293711
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  21293751 gtcactaatttccctcgctaattttgttttttctagtagtg 21293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22140404 - 22140364
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  22140404 gtcactaatttccctcgttaattttgctttttctagtagtg 22140364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27039948 - 27039908
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  27039948 gtcactaatttccctctctaattttgctttttctagtagtg 27039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32185927 - 32185967
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  32185927 gtcactaatttccctcgctaattttgttttttctagtagtg 32185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 44723032 - 44723068
Alignment:
Q  6 taatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||||||||||||||||||||||    
T  44723032 taatttccctcgctaattttgctttttctagtagtgt 44723068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 26243359 - 26243320
Alignment:
Q  3 cactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  26243359 cactaatttccctcgttaattttgctttttctagtagtgt 26243320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28319619 - 28319580
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  28319619 gtcactaatttccctcactaattttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 28841379 - 28841341
Alignment:
Q  4 actaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  28841379 actaatttccctcgctaattttgcttttcctagtagtgt 28841341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1141631 - 1141664
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttct 34  Q
    ||||||||||||||||||||||||||||||||||    
T  1141631 gtcactaatttccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 32300546 - 32300579
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttct 34  Q
    ||||||||||||||||||||||||||||||||||    
T  32300546 gtcactaatttccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 36550931 - 36550972
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||||||| ||||||||| ||||||||||||||||    
T  36550931 tcactaatttccctctctaattttgttttttctagtagtgta 36550972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8430391 - 8430431
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  8430391 gtcactaatttcccccgctaattttgttttttctagtagtg 8430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18551293 - 18551253
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  18551293 gtcactaattttcctcgctaattttgctttttttagtagtg 18551253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41637713 - 41637753
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  41637713 gtcacaaatttccctccctaattttgctttttctagtagtg 41637753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14757161 - 14757118
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    |||| |||||| | ||||||||||||||||||||||||||||||    
T  14757161 gtcattaattttcttcgctaattttgctttttctagtagtgtat 14757118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23388418 - 23388379
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  23388418 gtcaccaatttccctcgctaattttgttttttctagtagt 23388379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 16098954 - 16098917
Alignment:
Q  4 actaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  16098954 actaatttccctccctaattttgatttttctagtagtg 16098917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13613133 - 13613093
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||| ||||||||||||| ||||||| |||||||    
T  13613133 gtcactaattttcctcgctaatttttctttttccagtagtg 13613093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22192274 - 22192314
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  22192274 gtcactaatttctctccctgattttgctttttctagtagtg 22192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 28262460 - 28262496
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagta 38  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  28262460 tcactaatttcccttgctaattttactttttctagta 28262496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29749443 - 29749403
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| |||||||||  ||||||||||||||||||||||||    
T  29749443 gtcacaaatttcccttcctaattttgctttttctagtagtg 29749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37724032 - 37723992
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||| ||||| |||||||||| ||||    
T  37724032 gtcactaatttccctcgctgatttttctttttctagcagtg 37723992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15030 - 14989
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15030 gtcactaatttccctcgctaattttgctttttctagtagtgt 14989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 39742 - 39701
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39742 tcactaatttccctcgctaattttgctttttctagtagtgta 39701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16121879 - 16121838
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16121879 gtcactaatttccctcgctaattttgctttttctagtagtgt 16121838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12045826 - 12045866
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12045826 gtcactaatttccctcgctaattttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36196493 - 36196533
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36196493 gtcactaatttccctcgctaattttgctttttctagtagtg 36196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38837711 - 38837671
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38837711 gtcactaatttccctcgctaattttgctttttctagtagtg 38837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7003770 - 7003727
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  7003770 gtcactaatttccctcgctaattttgttttttctagtagtgtat 7003727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 618393 - 618434
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  618393 gtcactaatttccctcgctaattttgctttttctaatagtgt 618434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 746908 - 746867
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  746908 gtcactaatttccctcgctaattttgctttttcttgtagtgt 746867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 19891025 - 19890984
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  19891025 tcactaatttccctcgctaattttgctttttctaatagtgta 19890984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35620384 - 35620343
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  35620384 gtcactaatttccctcgctaattttgctttttctaatagtgt 35620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40484143 - 40484184
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  40484143 gtcactaatttccctcgctaatttttctttttctagtagtgt 40484184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4125228 - 4125188
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  4125228 gtcactaatttccctcgctaattttactttttctagtagtg 4125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5982745 - 5982785
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  5982745 gtcactaatttccctcgctgattttgctttttctagtagtg 5982785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7888896 - 7888936
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  7888896 gtcaataatttccctcgctaattttgctttttctagtagtg 7888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8108900 - 8108860
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  8108900 gtcactaatttccctctctaattttgctttttctagtagtg 8108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 13974114 - 13974078
Alignment:
Q  5 ctaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  13974114 ctaatttccctcgctaattttgctttttctagtagtg 13974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15061072 - 15061112
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15061072 gtcactaatttccctcgctaattttgctttttctggtagtg 15061112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16631914 - 16631874
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  16631914 gtcactaatttccctcgctaatttttctttttctagtagtg 16631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17039671 - 17039627
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtatc 45  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||    
T  17039671 gtcactaattttcctcactaattttgctttttctagtagtgtatc 17039627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29727935 - 29727895
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  29727935 gtcactaatttccctcgctaattttactttttctagtagtg 29727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 36716239 - 36716200
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  36716239 tcactaatttccctcgctaattttgttttttctagtagtg 36716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 12328263 - 12328225
Alignment:
Q  4 actaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  12328263 actaatttccctcactaattttgctttttctagtagtgt 12328225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 26708623 - 26708585
Alignment:
Q  3 cactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  26708623 cactaatttccctcgctaattttgcattttctagtagtg 26708585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 26978357 - 26978319
Alignment:
Q  3 cactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  26978357 cactaatttccctcgctaattttgcattttctagtagtg 26978319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10494836 - 10494877
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  10494836 gtcactaatttccctcgctacatttgctttttctagtagtgt 10494877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28265515 - 28265474
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  28265515 gtcactaattttcctcgctaattttactttttctagtagtgt 28265474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2472754 - 2472714
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  2472754 gtcactaatttccttcactaattttgctttttctagtagtg 2472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8886891 - 8886851
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  8886891 gtcacaaattttcctcgctaattttgctttttctagtagtg 8886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23409080 - 23409120
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  23409080 gtcactaatttttctcgctaattttgctttttctagtagtg 23409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25652623 - 25652583
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  25652623 gtcactgatttccctcgctaattttgctttttctaatagtg 25652583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 36831926 - 36831890
Alignment:
Q  5 ctaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36831926 ctaatttccctcactaattttgctttttctagtagtg 36831890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17772008 - 17771969
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  17772008 gtcactaatttccctcgctgatttttctttttctagtagt 17771969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 23975734 - 23975765
Alignment:
Q  1 gtcactaatttccctcgctaattttgcttttt 32  Q
    ||||||||||||||||||||||||||||||||    
T  23975734 gtcactaatttccctcgctaattttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33818601 - 33818558
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||| |||||||||| | |||||||||||||||||||||||||    
T  33818601 gtcacaaatttccctccccaattttgctttttctagtagtgtat 33818558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24138881 - 24138839
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||    
T  24138881 gtcaccaattttcctcgctaattttgctttttctaatagtgta 24138839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13620167 - 13620126
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||| || ||||| ||||||||||||||||    
T  13620167 gtcactaatttccctccctgatttttctttttctagtagtgt 13620126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25397828 - 25397787
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||| |||||||||| |||||||||||||| ||||||||||    
T  25397828 gtcacaaatttccctccctaattttgcttttcctagtagtgt 25397787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16464728 - 16464768
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| |||||||||| ||| |||||||||    
T  16464728 gtcactaatttccctccctaattttgcctttcctagtagtg 16464768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20187981 - 20187941
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||| ||||||||||||||||| ||| |||||    
T  20187981 gtcactaatttccttcgctaattttgcttttgctaatagtg 20187941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4586798 - 4586757
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4586798 gtcactaatttccctcgctaattttgctttttctagtagtgt 4586757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13564955 - 13564914
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13564955 gtcactaatttccctcgctaattttgctttttctagtagtgt 13564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 55309252 - 55309211
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  55309252 gtcactaatttccctcgctaattttgctttttctagtagtgt 55309211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5473946 - 5473986
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5473946 gtcactaatttccctcgctaattttgctttttctagtagtg 5473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7111986 - 7111946
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7111986 gtcactaatttccctcgctaattttgctttttctagtagtg 7111946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19839276 - 19839316
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19839276 gtcactaatttccctcgctaattttgctttttctagtagtg 19839316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22168365 - 22168405
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22168365 gtcactaatttccctcgctaattttgctttttctagtagtg 22168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27040065 - 27040025
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27040065 gtcactaatttccctcgctaattttgctttttctagtagtg 27040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30269028 - 30268985
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  30269028 gtcactgatttccctcgctaattttgctttttctagtagtgtat 30268985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30283161 - 30283204
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  30283161 gtcactgatttccctcgctaattttgctttttctagtagtgtat 30283204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32175777 - 32175735
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  32175777 gtcactaatttccctcgttaattttgctttttctagtagtgta 32175735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38619944 - 38619985
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  38619944 gtcattaatttccctcgctaattttgctttttctagtagtgt 38619985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44783580 - 44783621
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  44783580 gtcactaatttccctcgctagttttgctttttctagtagtgt 44783621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9238665 - 9238625
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  9238665 gtcactaatttccctcgctaattttgctttttttagtagtg 9238625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9670519 - 9670479
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  9670519 gtcactaatttccctcgctaatttttctttttctagtagtg 9670479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38645847 - 38645887
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  38645847 gtcaataatttccctcgctaattttgctttttctagtagtg 38645887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45091358 - 45091398
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  45091358 gtcactaatttccctcgctaattttgttttttctagtagtg 45091398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4627118 - 4627079
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  4627118 gtcattaatttccctcgctaattttgctttttctagtagt 4627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13028856 - 13028813
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  13028856 gtcactaattttcctcgctaagtttgctttttctagtagtgtat 13028813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46286269 - 46286226
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||||| || |||||||||||||||||||||||||||    
T  46286269 gtcactaatttccgtcactaattttgctttttctagtagtgtat 46286226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 12072060 - 12072102
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  12072060 tcactaatttcgctcgctaattttgctttttctaatagtgtat 12072102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 42055501 - 42055534
Alignment:
Q  8 atttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||||||||||||    
T  42055501 atttccctcgctaattttgctttttctagtagtg 42055534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 45532619 - 45532578
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  45532619 gtcactaatttccctcgttaattttgctttttctaatagtgt 45532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18714999 - 18715039
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  18714999 gtcacttatttccctcgctaatattgctttttctagtagtg 18715039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30420073 - 30420033
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  30420073 gtcactaattttcctccctaattttgctttttctagtagtg 30420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 54539383 - 54539423
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  54539383 gtcactaattttccttgctaattttgctttttctagtagtg 54539423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2275718 - 2275676
Alignment:
Q  1 gtcactaatttccctcgctaa-ttttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||| ||||| |||||||||||||||    
T  2275718 gtcactaatttccctcgctaatttttgttttttctagtagtgt 2275676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18051936 - 18051978
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||| ||||||||||||||||| | ||||||    
T  18051936 gtcactaatttccctcactaattttgctttttctggcagtgta 18051978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4606869 - 4606828
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||| |||||||| ||||| ||||||||||    
T  4606869 gtcactaatttccctccctaattttacttttcctagtagtgt 4606828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19680464 - 19680423
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||| ||||||| |||||||| ||||||||||||||||    
T  19680464 gtcactaaattccctcactaatttttctttttctagtagtgt 19680423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22128352 - 22128311
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||| || |||||| |||||||||||||||    
T  22128352 gtcactaatttccctccctgattttgttttttctagtagtgt 22128311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25026654 - 25026695
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||| |||||||| ||||||||| ||||||    
T  25026654 gtcactaatttccctcactaattttactttttctaatagtgt 25026695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 30508091 - 30508124
Alignment:
Q  8 atttccctcgctaattttgctttttctagtagtg 41  Q
    |||| |||||||||||||||||||||||||||||    
T  30508091 attttcctcgctaattttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1638544 - 1638584
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| ||||||||| |||| |||||||||    
T  1638544 gtcactaatttccctccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8878980 - 8879020
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| || |||||||||||||| ||||||    
T  8878980 gtcactaatttccctctctgattttgctttttcttgtagtg 8879020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9058992 - 9058952
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| |||||||||| |||||||||||||| |||||||||    
T  9058992 gtcacaaatttccctccctaattttgcttttcctagtagtg 9058952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 16915467 - 16915507
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||| |||| || ||||||||||||||||||||||    
T  16915467 tcactaattttcctccctgattttgctttttctagtagtgt 16915507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29625422 - 29625462
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||| ||||||||||||||||||||||||||| || |||||    
T  29625422 gtcattaatttccctcgctaattttgctttttatattagtg 29625462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33914156 - 33914196
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| |||||||||| |||||||||||||| |||||||||    
T  33914156 gtcacaaatttccctccctaattttgcttttcctagtagtg 33914196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12369991 - 12369950
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12369991 gtcactaatttccctcgctaattttgctttttctagtagtgt 12369950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28229495 - 28229454
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  28229495 gtcactaatttccctcgctaattttgctttttctagtagtgt 28229454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46790099 - 46790140
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  46790099 gtcactaatttccctcgctaattttgctttttctagtagtgt 46790140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8941034 - 8940994
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8941034 gtcactaatttccctcgctaattttgctttttctagtagtg 8940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9110015 - 9109975
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9110015 gtcactaatttccctcgctaattttgctttttctagtagtg 9109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12720908 - 12720948
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12720908 gtcactaatttccctcgctaattttgctttttctagtagtg 12720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29549517 - 29549557
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29549517 gtcactaatttccctcgctaattttgctttttctagtagtg 29549557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46339485 - 46339442
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  46339485 gtcactaattttcctcgctaattttgctttttctagtagtgtat 46339442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 6412090 - 6412052
Alignment:
Q  4 actaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6412090 actaatttccctcgctaattttgctttttctagtagtgt 6412052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7181595 - 7181553
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  7181595 gtcactaatttcccttgctaattttgctttttctagtagtgta 7181553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 41120776 - 41120734
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  41120776 tcactaatttccctcgctaattttgctttttctattagtgtat 41120734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 51973526 - 51973564
Alignment:
Q  4 actaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51973526 actaatttccctcgctaattttgctttttctagtagtgt 51973564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6459316 - 6459357
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  6459316 gtcactaatttccctcgctaatttcgctttttctagtagtgt 6459357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20408200 - 20408160
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  20408200 gtcactaattttcctcgctaattttgctttttctagtagtg 20408160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45839391 - 45839431
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  45839391 gtcactaatttccctcgttaattttgctttttctagtagtg 45839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48522617 - 48522657
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  48522617 gtcactaattttcctcgctaattttgctttttctagtagtg 48522657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50092338 - 50092298
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  50092338 gtcactaatttccctcgctaatttttctttttctagtagtg 50092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 22603648 - 22603687
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  22603648 tcactaatttcccttgctaattttgctttttctagtagtg 22603687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25788037 - 25787998
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  25788037 gtcactaattttcctcgctaattttgctttttctagtagt 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18894940 - 18894898
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  18894940 gtcactaattttcctcgctaattttgcttttcctagtagtgta 18894898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 46785998 - 46785964
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttcta 35  Q
    |||||||||||||||||||||||||||||||||||    
T  46785998 gtcactaatttccctcgctaattttgctttttcta 46785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4340506 - 4340547
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  4340506 gtcactaatttcccttgctaattttgctttttctaatagtgt 4340547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 9177202 - 9177239
Alignment:
Q  4 actaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9177202 actaatttccctcgctaattttgttttttctagtagtg 9177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17200050 - 17200009
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  17200050 gtcactgatttccctcgctaattttgttttttctagtagtgt 17200009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19865343 - 19865384
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  19865343 gtcactaattttcctcgctaattttactttttctagtagtgt 19865384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20290361 - 20290320
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||| |||||||||| |||||    
T  20290361 gtcactaatttccctcgctaattttactttttctagcagtgt 20290320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50845370 - 50845329
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  50845370 gtcacaaatttccctccctaattttgctttttctagtagtgt 50845329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9985367 - 9985327
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  9985367 gtcactaatttcccttgctaattttgttttttctagtagtg 9985327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 18890588 - 18890556
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttct 34  Q
    |||||||||||||||||||||||||||||||||    
T  18890588 tcactaatttccctcgctaattttgctttttct 18890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22158901 - 22158941
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  22158901 gtcactaatttccctcgctaattttactttttctggtagtg 22158941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41752532 - 41752572
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  41752532 gtcactaatttccgtcactaattttgctttttctagtagtg 41752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 52183777 - 52183817
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  52183777 gtcattaatttccctcgttaattttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14760966 - 14761007
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||| ||||||||||  ||||||||||||||||||||||||    
T  14760966 gtcacaaatttccctctttaattttgctttttctagtagtgt 14761007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15243184 - 15243225
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||| |||||| ||||| ||||||||||||||||    
T  15243184 gtcactaatttctctcgctgatttttctttttctagtagtgt 15243225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18787953 - 18787912
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||| || |||||||||||||||| ||||||||    
T  18787953 gtcactaatttccatccctaattttgctttttcaagtagtgt 18787912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23457996 - 23458037
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||| |||||| ||||||||||||| ||||||||||||||||    
T  23457996 gtcaataattttcctcgctaattttactttttctagtagtgt 23458037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38531210 - 38531169
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||| ||||||||| |||||||| ||||||||||||||||    
T  38531210 gtcacttatttccctccctaattttactttttctagtagtgt 38531169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46865342 - 46865383
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||| ||| |||| ||||||||||||||||    
T  46865342 gtcactaatttccctccctagtttttctttttctagtagtgt 46865383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12161913 - 12161953
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||| |||||| ||||||||||||| |||||||||||||||    
T  12161913 gtcaataattttcctcgctaattttactttttctagtagtg 12161953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 13195683 - 13195723
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||| |||||| |||||||||| ||||||||||||||    
T  13195683 tcactaatctccctccctaattttgcattttctagtagtgt 13195723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17661149 - 17661189
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||| ||| ||||||||||||||||| |||||    
T  17661149 gtcactaatttccgtcgttaattttgctttttctaatagtg 17661189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22310 - 22350
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22310 gtcactaatttccctcgctaattttgctttttctagtagtg 22350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27449183 - 27449223
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27449183 gtcactaatttccctcgctaattttgctttttctagtagtg 27449223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43329803 - 43329763
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  43329803 gtcactaatttccctcgctaattttgctttttctagtagtg 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48404955 - 48404995
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  48404955 gtcactaatttccctcgctaattttgctttttctagtagtg 48404995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11915853 - 11915892
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11915853 gtcactaatttccctcgctaattttgctttttctagtagt 11915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 26098909 - 26098948
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26098909 tcactaatttccctcgctaattttgctttttctagtagtg 26098948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13921420 - 13921462
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  13921420 gtcactaattttcctcgctaattttgctttttctagtagtgta 13921462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8110434 - 8110475
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  8110434 gtcactaatttccctcactaattttgctttttctagtagtgt 8110475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9652673 - 9652714
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  9652673 gtcactaatttccctcgccaattttgctttttctagtagtgt 9652714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18104570 - 18104529
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  18104570 gtcaataatttccctcgctaattttgctttttctagtagtgt 18104529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19269904 - 19269863
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  19269904 gtcactaatttccctcgctaattttgctttttctaatagtgt 19269863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25882665 - 25882706
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  25882665 gtcactaatttccctcgctaattttgctttttctaatagtgt 25882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26390674 - 26390633
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  26390674 gtcactaatttctctcgctaattttgctttttctagtagtgt 26390633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1745528 - 1745488
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  1745528 gtcactaatttccctcgctaattttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3461350 - 3461310
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  3461350 gtcactaatttccttcgctaattttgctttttctagtagtg 3461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5261032 - 5261072
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  5261032 gtcactaatttccctcactaattttgctttttctagtagtg 5261072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11219233 - 11219273
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  11219233 gtcactaatttccctcgctaattttgttttttctagtagtg 11219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18091587 - 18091547
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  18091587 gtcactaatttccctcgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19223544 - 19223584
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  19223544 gtcaccaatttccctcgctaattttgctttttctagtagtg 19223584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21816816 - 21816856
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  21816816 gtcactaatttccctcgctaatttttctttttctagtagtg 21816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29236139 - 29236179
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  29236139 gtcactaatttccctcgctaattttgctttttctaatagtg 29236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 29956468 - 29956507
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  29956468 tcactaatttccctcgctaattttactttttctagtagtg 29956507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 30005623 - 30005662
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  30005623 tcactaatttccctcgctaattttactttttctagtagtg 30005662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5565817 - 5565859
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  5565817 gtcactaatttccctccctgattttgctttttctagtagtgta 5565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8546340 - 8546382
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  8546340 gtcactaattttcctcgctaattttgctttttctggtagtgta 8546382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11386430 - 11386468
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtag 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  11386430 gtcactaatttccatcgctaattttgctttttctagtag 11386468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1310999 - 1310958
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  1310999 gtcactaattttccttgctaattttgctttttctagtagtgt 1310958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13905078 - 13905037
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  13905078 gtcactaatttcgctctctaattttgctttttctagtagtgt 13905037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 6447285 - 6447245
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  6447285 tcactaatttccctccctaattttgcttttcctagtagtgt 6447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7623571 - 7623531
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  7623571 gtcactaatttccctcgctgatttttctttttctagtagtg 7623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8428266 - 8428306
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  8428266 gtcactaatttccctcgctaattttattttttctagtagtg 8428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10772093 - 10772053
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  10772093 gtcactaatttccctcgttaattttactttttctagtagtg 10772053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10941705 - 10941665
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  10941705 gtcactaatttcccttactaattttgctttttctagtagtg 10941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11007723 - 11007683
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  11007723 gtcactaatttcccttactaattttgctttttctagtagtg 11007683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17762737 - 17762777
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  17762737 gtcactaatttccctcgctaattttgttctttctagtagtg 17762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18380119 - 18380159
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  18380119 gtcactgatttccctcgctaattttactttttctagtagtg 18380159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19064057 - 19064097
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  19064057 gtcactaatttccctcgctaattttgttctttctagtagtg 19064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20761990 - 20761950
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  20761990 gtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21020160 - 21020200
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  21020160 gtcactaatttccctccctaattttgcttttcctagtagtg 21020200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 8543564 - 8543603
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  8543564 tcactaatttccctcgctaattttgttttttctaatagtg 8543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 11837253 - 11837214
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  11837253 tcacgaatttccctcgctaattttgttttttctagtagtg 11837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 17269639 - 17269604
Alignment:
Q  6 taatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||| |||||||||||||||||||||||||||    
T  17269639 taatttccatcgctaattttgctttttctagtagtg 17269604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27969010 - 27969049
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  27969010 gtcactaatttccctccctgattttgctttttctagtagt 27969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 29704072 - 29704041
Alignment:
Q  1 gtcactaatttccctcgctaattttgcttttt 32  Q
    ||||||||||||||||||||||||||||||||    
T  29704072 gtcactaatttccctcgctaattttgcttttt 29704041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46942582 - 46942625
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||||| || ||||||||| |||||||||||||||||    
T  46942582 gtcactaatttccttccctaattttgatttttctagtagtgtat 46942625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4393390 - 4393348
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||| ||||||||||||||||| | ||||||    
T  4393390 gtcactaatttccctcactaattttgctttttctggcagtgta 4393348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 23233218 - 23233180
Alignment:
Q  7 aatttccctcgctaattttgctttttctagtagtgtatc 45  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  23233218 aatttccctccctaattttgctttttctaatagtgtatc 23233180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27182698 - 27182656
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    |||||||||||||||| ||||||||| |||| |||||||||||    
T  27182698 gtcactaatttccctccctaattttgtttttcctagtagtgta 27182656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10803816 - 10803857
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||| ||||||||||| ||||||| |||||||||||||||||    
T  10803816 gtcattaatttccctccctaatttggctttttctagtagtgt 10803857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15064032 - 15063991
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||| |||||||||| |||||||||||||| ||||||||||    
T  15064032 gtcacaaatttccctccctaattttgcttttcctagtagtgt 15063991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18539899 - 18539932
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttct 34  Q
    |||||||||||||||| |||||||||||||||||    
T  18539899 gtcactaatttccctctctaattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 20088504 - 20088541
Alignment:
Q  5 ctaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  20088504 ctaatttccctctctaattttactttttctagtagtgt 20088541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30219433 - 30219474
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||| |||||||||| |||||||||||||| ||||||||||    
T  30219433 gtcacaaatttccctccctaattttgcttttcctagtagtgt 30219474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6088268 - 6088228
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||  || |||||||||||||||||||||    
T  6088268 gtcactaatttcccttacttattttgctttttctagtagtg 6088228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19610433 - 19610473
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| |||||||||| |||||||||||||| |||||||||    
T  19610433 gtcacaaatttccctccctaattttgcttttcctagtagtg 19610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23773572 - 23773612
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||  ||||||||| ||||||||||||||    
T  23773572 gtcactaatttcccttactaattttgttttttctagtagtg 23773612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46012768 - 46012728
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  46012768 gtcactaattttcctccctgattttgctttttctagtagtg 46012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47263305 - 47263265
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| ||||||| ||| |||||||||||||||||||||||    
T  47263305 gtcaccaatttccttcgttaattttgctttttctagtagtg 47263265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7604 - 7643
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7604 gtcactaatttccctcgctaattttgctttttctagtagt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19702 - 19745
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19702 gtcactaatttcccttgctaattttgctttttctagtagtgtat 19745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10703 - 10660
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  10703 gtcactaatttccctcgctaattttgctttttctagcagtgtat 10660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3841 - 3884
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  3841 gtcactaattttcctcgctaattttgctttttctagtagtgtat 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 202873 - 202913
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  202873 gtcactaatttccctcgctaatttttctttttctagtagtg 202913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 274705 - 274665
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  274705 gtcactaatttccctcgctaattttgttttttctagtagtg 274665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 958 - 917
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  958 gtcagtaatttccctcgctaattttgctttttctagtagtgt 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9269 - 9228
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  9269 gtcactaatttccctcactaattttgctttttctagtagtgt 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12751 - 12792
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  12751 gtcactaatttccctcgctaattttgctttttcaagtagtgt 12792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6019 - 5979
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  6019 gtcactaatttccctcgctaattttgttttttctagtagtg 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 9910 - 9950
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  9910 tcactaatttcactcgctaattttgctttttctagtagtgt 9950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 44017 - 44057
Alignment:
Q  2 tcactaatttccctcgctaattttgctttttctagtagtgt 42  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  44017 tcactaatttccctcgctaatttttctttttctagtagtgt 44057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17657 - 17617
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  17657 gtcactaatttccctcgctaattttgttttttctagtagtg 17617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 219735 - 219775
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  219735 gtcactaatttccgtcgctaattttgctttttctagtagtg 219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 182629 - 182668
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagt 40  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  182629 gtcactaatttccctcgctaattttactttttctagtagt 182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 215699 - 215663
Alignment:
Q  5 ctaatttccctcgctaattttgctttttctagtagtg 41  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  215699 ctaatttctctcgctaattttgctttttttagtagtg 215663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 84402 - 84442
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  84402 gtcactaatttcccttgctaattttgctttttctagtagtg 84442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8150 - 8107
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    |||| ||||||||||||||||||||||||||||||| |||||||    
T  8150 gtcattaatttccctcgctaattttgctttttctagaagtgtat 8107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21882 - 21839
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    |||| ||||||||||||||||||||||||||||||| |||||||    
T  21882 gtcattaatttccctcgctaattttgctttttctagaagtgtat 21839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6894 - 6937
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtat 44  Q
    |||| ||||||||||||||||||||||||||||||||| |||||    
T  6894 gtcaataatttccctcgctaattttgctttttctagtaatgtat 6937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26582 - 26624
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgta 43  Q
    ||||||||||||| || ||||||||||||||||||||||||||    
T  26582 gtcactaatttccgtcactaattttgctttttctagtagtgta 26624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 84714 - 84678
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagt 37  Q
    |||||||||||||||| ||||||||||||||||||||    
T  84714 gtcactaatttccctcactaattttgctttttctagt 84678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3202 - 3156
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtgtatcga 47  Q
    |||||||||||||||| |||||||| ||||||||| |||||| ||||    
T  3202 gtcactaatttccctccctaatttttctttttctattagtgtgtcga 3156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 74757 - 74720
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagta 38  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  74757 gtcactaatttcccttgctaattttgccttttctagta 74720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37827 - 37787
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||||  |||||||||| ||||||||||||||    
T  37827 gtcactaatttcccctgctaattttgttttttctagtagtg 37787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 58681 - 58721
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||| |||||||||| |||||||||||||| |||||||||    
T  58681 gtcacaaatttccctccctaattttgcttttcctagtagtg 58721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 173545 - 173584
Alignment:
Q  1 gtcactaatttccctcgctaattttgctttttctagtagtg 41  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  173545 gtcactaatttcc-tcgctaattttgctttttctaatagtg 173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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