View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9670_low_16 (Length: 387)

Name: NF9670_low_16
Description: NF9670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9670_low_16
NF9670_low_16
[»] chr4 (30 HSPs)
chr4 (198-327)||(5882335-5882465)
chr4 (194-327)||(5846840-5846973)
chr4 (201-327)||(5884917-5885043)
chr4 (351-387)||(18751597-18751633)
chr4 (352-387)||(4220070-4220105)
chr4 (352-387)||(54995578-54995613)
chr4 (119-193)||(23293027-23293101)
chr4 (350-387)||(2118806-2118843)
chr4 (347-384)||(22170450-22170487)
chr4 (351-387)||(16318287-16318323)
chr4 (119-195)||(20633427-20633503)
chr4 (347-387)||(46193399-46193439)
chr4 (347-387)||(46193916-46193956)
chr4 (348-387)||(11153141-11153180)
chr4 (356-387)||(11153658-11153689)
chr4 (356-387)||(15523238-15523269)
chr4 (356-387)||(18764031-18764062)
chr4 (356-387)||(20471022-20471053)
chr4 (352-387)||(22434687-22434722)
chr4 (356-387)||(23494954-23494985)
chr4 (356-387)||(25447250-25447281)
chr4 (350-385)||(48526694-48526729)
chr4 (352-387)||(54995068-54995103)
chr4 (356-386)||(22434182-22434212)
chr4 (356-386)||(45082936-45082966)
chr4 (356-386)||(48293597-48293627)
chr4 (350-387)||(25938182-25938219)
chr4 (352-384)||(229160-229192)
chr4 (119-193)||(2362016-2362092)
chr4 (351-387)||(10258398-10258434)
[»] chr7 (19 HSPs)
chr7 (119-193)||(1433398-1433472)
chr7 (347-385)||(29100364-29100402)
chr7 (119-183)||(24339596-24339660)
chr7 (351-386)||(4641438-4641473)
chr7 (352-387)||(19830419-19830454)
chr7 (119-193)||(25481846-25481920)
chr7 (119-193)||(26329423-26329497)
chr7 (350-387)||(19830930-19830967)
chr7 (350-387)||(37786764-37786801)
chr7 (356-387)||(4641952-4641983)
chr7 (356-387)||(19590528-19590559)
chr7 (356-387)||(28583442-28583473)
chr7 (356-387)||(32004617-32004648)
chr7 (356-387)||(34533794-34533825)
chr7 (344-387)||(35289412-35289455)
chr7 (356-387)||(38859152-38859183)
chr7 (119-193)||(30730981-30731055)
chr7 (356-384)||(23952733-23952761)
chr7 (350-386)||(38858640-38858676)
[»] chr6 (31 HSPs)
chr6 (119-193)||(7938060-7938134)
chr6 (119-192)||(10339167-10339240)
chr6 (119-193)||(9107411-9107485)
chr6 (119-192)||(16766642-16766715)
chr6 (119-182)||(5732551-5732614)
chr6 (119-193)||(1681702-1681776)
chr6 (119-193)||(9027122-9027196)
chr6 (354-387)||(18504920-18504953)
chr6 (351-387)||(15828152-15828188)
chr6 (351-387)||(23073997-23074033)
chr6 (121-197)||(24115890-24115966)
chr6 (341-387)||(10899926-10899973)
chr6 (356-387)||(11444990-11445021)
chr6 (356-387)||(11445498-11445529)
chr6 (356-387)||(12935160-12935191)
chr6 (119-150)||(20371151-20371182)
chr6 (356-387)||(20741103-20741134)
chr6 (356-387)||(22219864-22219895)
chr6 (356-387)||(23075639-23075670)
chr6 (356-387)||(28472640-28472671)
chr6 (356-387)||(29859829-29859860)
chr6 (119-185)||(7977871-7977937)
chr6 (119-193)||(8777014-8777088)
chr6 (356-386)||(11277094-11277124)
chr6 (356-386)||(12935669-12935699)
chr6 (119-193)||(13851680-13851754)
chr6 (356-386)||(15827641-15827671)
chr6 (356-386)||(18257140-18257170)
chr6 (350-387)||(20741615-20741652)
chr6 (117-174)||(1532201-1532260)
chr6 (351-387)||(31470313-31470349)
[»] chr3 (39 HSPs)
chr3 (121-192)||(16000059-16000130)
chr3 (343-386)||(32534949-32534992)
chr3 (119-175)||(8383219-8383275)
chr3 (352-387)||(5136979-5137014)
chr3 (119-193)||(35994778-35994852)
chr3 (353-387)||(41046700-41046734)
chr3 (348-385)||(37726924-37726961)
chr3 (350-387)||(39555575-39555612)
chr3 (351-387)||(27394088-27394124)
chr3 (356-387)||(4275875-4275906)
chr3 (356-387)||(5137492-5137523)
chr3 (356-387)||(17464494-17464525)
chr3 (356-387)||(20840563-20840594)
chr3 (348-387)||(20841072-20841111)
chr3 (348-387)||(23644457-23644496)
chr3 (356-387)||(24301067-24301098)
chr3 (353-384)||(25612491-25612522)
chr3 (356-387)||(25853237-25853268)
chr3 (356-387)||(26837866-26837897)
chr3 (350-385)||(31778650-31778685)
chr3 (356-387)||(31779163-31779194)
chr3 (356-387)||(32535474-32535505)
chr3 (356-387)||(39556088-39556119)
chr3 (356-387)||(43973951-43973982)
chr3 (119-193)||(3164066-3164140)
chr3 (119-193)||(4991008-4991082)
chr3 (119-193)||(10335327-10335401)
chr3 (123-193)||(10455734-10455804)
chr3 (119-193)||(15796335-15796409)
chr3 (345-387)||(17465003-17465045)
chr3 (119-193)||(24205082-24205156)
chr3 (119-161)||(25064885-25064927)
chr3 (356-386)||(45965941-45965971)
chr3 (351-384)||(27393659-27393692)
chr3 (351-384)||(30098277-30098310)
chr3 (356-385)||(51473431-51473460)
chr3 (356-384)||(30104485-30104513)
chr3 (356-384)||(37222085-37222113)
chr3 (356-384)||(43973444-43973472)
[»] chr8 (23 HSPs)
chr8 (119-193)||(29510345-29510419)
chr8 (351-387)||(33328156-33328192)
chr8 (119-193)||(27101459-27101533)
chr8 (350-387)||(11656968-11657005)
chr8 (350-387)||(13225150-13225187)
chr8 (119-196)||(22651917-22651994)
chr8 (353-385)||(12572364-12572396)
chr8 (356-387)||(9178146-9178177)
chr8 (356-387)||(11656458-11656489)
chr8 (356-387)||(12571866-12571897)
chr8 (356-387)||(19176293-19176324)
chr8 (356-387)||(19176801-19176832)
chr8 (119-194)||(24362243-24362318)
chr8 (356-387)||(31133731-31133762)
chr8 (356-387)||(34541059-34541090)
chr8 (356-387)||(41681137-41681168)
chr8 (356-387)||(41681645-41681676)
chr8 (356-386)||(9177670-9177700)
chr8 (350-387)||(9930168-9930205)
chr8 (356-384)||(9928912-9928940)
chr8 (356-384)||(31133223-31133251)
chr8 (356-384)||(33742925-33742953)
chr8 (351-387)||(44831245-44831281)
[»] chr5 (25 HSPs)
chr5 (119-193)||(15382421-15382495)
chr5 (352-387)||(5818928-5818963)
chr5 (352-387)||(15372384-15372419)
chr5 (117-159)||(26609331-26609373)
chr5 (343-387)||(2865266-2865310)
chr5 (351-387)||(8461442-8461478)
chr5 (121-193)||(21522694-21522766)
chr5 (121-193)||(21533260-21533332)
chr5 (356-387)||(5819440-5819471)
chr5 (346-385)||(7349530-7349569)
chr5 (356-387)||(8647441-8647472)
chr5 (356-387)||(8647949-8647980)
chr5 (352-387)||(18182969-18183004)
chr5 (356-387)||(18183480-18183511)
chr5 (356-387)||(19359647-19359678)
chr5 (356-386)||(14215244-14215274)
chr5 (352-386)||(16019099-16019133)
chr5 (119-161)||(26716120-26716162)
chr5 (119-161)||(26985860-26985902)
chr5 (119-161)||(28588715-28588756)
chr5 (356-385)||(4222235-4222264)
chr5 (350-387)||(16018586-16018623)
chr5 (122-191)||(41995417-41995486)
chr5 (356-384)||(164194-164222)
chr5 (356-384)||(24331562-24331590)
[»] chr1 (31 HSPs)
chr1 (119-193)||(398806-398880)
chr1 (347-387)||(5540329-5540369)
chr1 (351-387)||(5963089-5963125)
chr1 (119-194)||(609499-609574)
chr1 (352-387)||(15173095-15173130)
chr1 (119-181)||(13011257-13011319)
chr1 (345-387)||(15173604-15173646)
chr1 (119-172)||(10572630-10572683)
chr1 (350-387)||(50970789-50970826)
chr1 (347-387)||(4636482-4636522)
chr1 (351-387)||(15646706-15646742)
chr1 (351-387)||(39154531-39154567)
chr1 (356-387)||(5539819-5539850)
chr1 (356-387)||(8678544-8678575)
chr1 (356-387)||(8679052-8679083)
chr1 (356-387)||(9018976-9019007)
chr1 (356-387)||(21856554-21856585)
chr1 (351-386)||(29869618-29869653)
chr1 (356-387)||(29870130-29870161)
chr1 (356-387)||(33144430-33144461)
chr1 (356-387)||(50970281-50970312)
chr1 (119-157)||(36878441-36878479)
chr1 (356-385)||(18984122-18984151)
chr1 (119-196)||(38078702-38078774)
chr1 (356-385)||(47826967-47826996)
chr1 (356-384)||(9019477-9019505)
chr1 (126-194)||(10577783-10577851)
chr1 (351-387)||(18984630-18984666)
chr1 (356-384)||(21856045-21856073)
chr1 (351-387)||(52268288-52268324)
chr1 (356-384)||(52269262-52269290)
[»] chr2 (27 HSPs)
chr2 (350-387)||(40027651-40027688)
chr2 (352-387)||(11090520-11090555)
chr2 (352-387)||(40815856-40815891)
chr2 (353-387)||(14432142-14432176)
chr2 (119-192)||(18276466-18276539)
chr2 (350-387)||(20444746-20444783)
chr2 (347-387)||(11091031-11091071)
chr2 (351-387)||(18450828-18450864)
chr2 (119-191)||(21616708-21616780)
chr2 (351-387)||(28617125-28617161)
chr2 (356-387)||(18451342-18451373)
chr2 (356-387)||(20440542-20440573)
chr2 (121-172)||(21624231-21624282)
chr2 (356-387)||(22374323-22374354)
chr2 (356-387)||(22374836-22374867)
chr2 (351-386)||(26538095-26538130)
chr2 (356-387)||(26538590-26538621)
chr2 (356-387)||(28616616-28616647)
chr2 (356-387)||(40815348-40815379)
chr2 (356-386)||(8972240-8972270)
chr2 (119-173)||(12224185-12224239)
chr2 (119-161)||(21782859-21782901)
chr2 (356-385)||(15551502-15551531)
chr2 (355-387)||(8425357-8425389)
chr2 (119-191)||(34337217-34337289)
chr2 (356-384)||(35779711-35779739)
chr2 (351-387)||(40027138-40027174)
[»] scaffold0007 (3 HSPs)
scaffold0007 (350-386)||(64817-64853)
scaffold0007 (119-195)||(225309-225385)
scaffold0007 (351-384)||(64300-64333)
[»] scaffold0053 (1 HSPs)
scaffold0053 (119-193)||(8742-8816)
[»] scaffold0652 (1 HSPs)
scaffold0652 (119-191)||(503-575)
[»] scaffold0951 (1 HSPs)
scaffold0951 (356-387)||(2178-2209)
[»] scaffold0417 (1 HSPs)
scaffold0417 (356-387)||(11134-11165)
[»] scaffold0295 (2 HSPs)
scaffold0295 (356-387)||(4796-4827)
scaffold0295 (356-387)||(5302-5333)
[»] scaffold0176 (1 HSPs)
scaffold0176 (356-387)||(19132-19163)
[»] scaffold0116 (1 HSPs)
scaffold0116 (126-193)||(9842-9909)
[»] scaffold0019 (1 HSPs)
scaffold0019 (356-387)||(134184-134215)
[»] scaffold0027 (1 HSPs)
scaffold0027 (119-193)||(46626-46700)
[»] scaffold0432 (1 HSPs)
scaffold0432 (356-385)||(10385-10414)


Alignment Details
Target: chr4 (Bit Score: 79; Significance: 8e-37; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 198 - 327
Target Start/End: Original strand, 5882335 - 5882465
Alignment:
Q  198 ccttttttaaggtagcatttttctcatccataatgtacggcccaaaaagactat-ctttatggaaagtgaacaactttaatgcatcatgatggagtctta 296  Q
    |||||| ||||||| ||||||||||||||| |||| ||| |||||||||||||| ||||||| |||||| |||||||||||||||||||||||| |||||    
T  5882335 ccttttataaggtaacatttttctcatccacaatggacgacccaaaaagactatgctttatgaaaagtggacaactttaatgcatcatgatggattctta 5882434  T
Q  297 ttcattgatagattagagatgaaatcagaca 327  Q
    ||||| ||||||||||||||| ||| |||||    
T  5882435 ttcatagatagattagagatgtaattagaca 5882465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 194 - 327
Target Start/End: Original strand, 5846840 - 5846973
Alignment:
Q  194 cttgccttttttaaggtagcatttttctcatccataatgtacggcccaaaaagactat-ctttatggaaagtgaacaactttaatgcatcatgatggagt 292  Q
    |||||| ||||||||| | | ||||||||||||| |||| ||| |||||||||||||| ||||||| |||||| ||||||| |||||||||||||||| |    
T  5846840 cttgccctttttaaggcaacgtttttctcatccacaatggacgacccaaaaagactatgctttatgaaaagtggacaactt-aatgcatcatgatggatt 5846938  T
Q  293 cttattcattgatagattagagatgaaatcagaca 327  Q
    ||||||||||||||||||||||||| ||| |||||    
T  5846939 cttattcattgatagattagagatgtaattagaca 5846973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 5884917 - 5885043
Alignment:
Q  201 tttttaaggtagcatttttctcatccataatgtacggcccaaaaagactat-ctttatggaaagtgaacaactttaatgcatcatgatggagtcttattc 299  Q
    ||||||||| | ||||||||||||||| |||| ||| |||||||||||||| |||||||||||||| | ||||| |||||||||||||||| ||||||||    
T  5884917 tttttaaggcaacatttttctcatccacaatggacgacccaaaaagactatgctttatggaaagtggaaaactt-aatgcatcatgatggattcttattc 5885015  T
Q  300 attgatagattagagatgaaatcagaca 327  Q
    |||||||||| ||||||| ||| |||||    
T  5885016 attgatagatcagagatgtaattagaca 5885043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 18751597 - 18751633
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||||||||||||||||||||||||||||||||||    
T  18751597 aaggtttaattacacttttggtcctcgtgttttggcc 18751633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 387
Target Start/End: Complemental strand, 4220105 - 4220070
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||||||    
T  4220105 aggtttaattacacttttggtcctcgtgttttggcc 4220070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 387
Target Start/End: Complemental strand, 54995613 - 54995578
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||||||    
T  54995613 aggtttaattacacttttggtcctcgtgttttggcc 54995578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 23293027 - 23293101
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||| |||||||||||||| |||   |||||||| | ||||||||||| ||||| ||| |||||||    
T  23293027 tcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatctgtgcttcatag 23293101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 2118843 - 2118806
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||||||||||||||||||||| |||||||||||||    
T  2118843 aaaggtttaattacacttttggtcttcgtgttttggcc 2118806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 384
Target Start/End: Complemental strand, 22170487 - 22170450
Alignment:
Q  347 taaaaaggtttaattacacttttggtcctcgtgttttg 384  Q
    |||||||| |||||||||||||||||||||||||||||    
T  22170487 taaaaaggcttaattacacttttggtcctcgtgttttg 22170450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 16318323 - 16318287
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||||||||||||||||||||    
T  16318323 aaggcttaattacacttttggtcctcgtgttttggcc 16318287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 20633503 - 20633427
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatagct 195  Q
    |||||||||||||||||||| ||||||| |||   | ||||||   ||||||||||| ||||||||| |||||||||    
T  20633503 tcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcatagct 20633427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 387
Target Start/End: Original strand, 46193399 - 46193439
Alignment:
Q  347 taaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  46193399 taaaatggcttaattacacttttggtcctcgtgttttggcc 46193439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 387
Target Start/End: Complemental strand, 46193956 - 46193916
Alignment:
Q  347 taaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  46193956 taaaaagacttaattacacttttggtcctcgtgttttggcc 46193916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 387
Target Start/End: Original strand, 11153141 - 11153180
Alignment:
Q  348 aaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  11153141 aaaaaggcttaattatacttttggtcctcgtgttttggcc 11153180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 11153689 - 11153658
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  11153689 ttaattacacttttggtcctcgtgttttggcc 11153658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 15523238 - 15523269
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  15523238 ttaattacacttttggtcctcgtgttttggcc 15523269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 18764062 - 18764031
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  18764062 ttaattacacttttggtcctcgtgttttggcc 18764031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 20471053 - 20471022
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  20471053 ttaattacacttttggtcctcgtgttttggcc 20471022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 387
Target Start/End: Complemental strand, 22434722 - 22434687
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||| ||||||||||||||||||||||    
T  22434722 aggtttaattacatttttggtcctcgtgttttggcc 22434687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 23494985 - 23494954
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  23494985 ttaattacacttttggtcctcgtgttttggcc 23494954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 25447250 - 25447281
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  25447250 ttaattacacttttggtcctcgtgttttggcc 25447281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 385
Target Start/End: Complemental strand, 48526729 - 48526694
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttgg 385  Q
    ||||||||||||| ||||||||||||||||||||||    
T  48526729 aaaggtttaattatacttttggtcctcgtgttttgg 48526694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 387
Target Start/End: Original strand, 54995068 - 54995103
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||| ||||||    
T  54995068 aggtttaattacacttttggtcctcgtgtattggcc 54995103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 386
Target Start/End: Original strand, 22434182 - 22434212
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||    
T  22434182 ttaattacacttttggtcctcgtgttttggc 22434212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 386
Target Start/End: Complemental strand, 45082966 - 45082936
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||    
T  45082966 ttaattacacttttggtcctcgtgttttggc 45082936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 386
Target Start/End: Original strand, 48293597 - 48293627
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||    
T  48293597 ttaattacacttttggtcctcgtgttttggc 48293627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 25938219 - 25938182
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  25938219 aaaggcttaattacacttttggtccttgtgttttggcc 25938182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 352 - 384
Target Start/End: Original strand, 229160 - 229192
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttg 384  Q
    ||||||||||||||||||||||||||| |||||    
T  229160 aggtttaattacacttttggtcctcgtattttg 229192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 2362016 - 2362092
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgt-tctg-tgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||| ||||||| ||||||||||  ||||||||| |||| ||| |||||| ||||||||  |||||||    
T  2362016 tcaaattattagctgtgtcggtgtgtcaatgtcaatgtcgtgtgtctgatgttcgtgtccgtatccgtacttcatag 2362092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 10258434 - 10258398
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| |||||||||||||||||||||||||| |||||    
T  10258434 aaggcttaattacacttttggtcctcgtgttgtggcc 10258398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 1433472 - 1433398
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||| ||||||||||||||||||||   |||||||||| ||||||||| | ||||||||| |||||||    
T  1433472 tcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccgtatccgtgcttcatag 1433398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 347 - 385
Target Start/End: Complemental strand, 29100402 - 29100364
Alignment:
Q  347 taaaaaggtttaattacacttttggtcctcgtgttttgg 385  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29100402 taaaaaggtttaattacacttttggtcctcgtgttttgg 29100364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 24339660 - 24339596
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccg 183  Q
    ||||||||||||| ||||||||||||||||||  ||||||||| | |||||||| || |||||||    
T  24339660 tcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtatccgtatccg 24339596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 386
Target Start/End: Original strand, 4641438 - 4641473
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggc 386  Q
    ||||||||||||||||||||||||||||||||||||    
T  4641438 aaggtttaattacacttttggtcctcgtgttttggc 4641473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 387
Target Start/End: Original strand, 19830419 - 19830454
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||||||    
T  19830419 aggtttaattacacttttggtcctcgtgttttggcc 19830454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 25481920 - 25481846
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||| |||||||||||||| |||  |||| |||| |  |||||||||| ||||||||| |||||||    
T  25481920 tcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgtgtctgtatccgtgcttcatag 25481846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 26329423 - 26329497
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||| || ||||||||||||| ||| | |||||||| | ||||||||||| |||| |||| |||||||    
T  26329423 tcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgtgtctgtattcgtgcttcatag 26329497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 19830967 - 19830930
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  19830967 aaaggcttaattacacttttggtcctcgtgttttggcc 19830930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 387
Target Start/End: Original strand, 37786764 - 37786801
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  37786764 aaaggcttaattacacttttggtcctcgtgttttggcc 37786801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 4641983 - 4641952
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcc 4641952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 19590528 - 19590559
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  19590528 ttaattacacttttggtcctcgtgttttggcc 19590559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 28583442 - 28583473
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  28583442 ttaattacacttttggtcctcgtgttttggcc 28583473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 32004617 - 32004648
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  32004617 ttaattacacttttggtcctcgtgttttggcc 32004648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 34533794 - 34533825
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  34533794 ttaattacacttttggtcctcgtgttttggcc 34533825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 35289455 - 35289412
Alignment:
Q  344 aaataaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||||    
T  35289455 aaataaataggcttaattacacttttgatcctcgtgttttggcc 35289412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 38859183 - 38859152
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  38859183 ttaattacacttttggtcctcgtgttttggcc 38859152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 30731055 - 30730981
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    |||||||||| |||||||||||||| || ||| | ||||||||   ||||||||||| ||||| ||| |||||||    
T  30731055 tcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatctgtgcttcatag 30730981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 23952733 - 23952761
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  23952733 ttaattacacttttggtcctcgtgttttg 23952761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 38858640 - 38858676
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggc 386  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  38858640 aaaggcttaataacacttttggtcctcgtgttttggc 38858676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 7938134 - 7938060
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||| |||||||||||||| |||  ||||||||| | ||||||||||| ||||||||| |||||||    
T  7938134 tcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 7938060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 10339167 - 10339240
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcata 192  Q
    |||||||| | ||||||||||||||||| |||| ||||||||| |||||||| |||| ||||||||| ||||||    
T  10339167 tcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtccatgtctgtatccgtgcttcata 10339240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 9107411 - 9107485
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||| |||||||||||| | |||   |||||||| | ||||||||||||||||||||| |||||||    
T  9107411 tcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcagtatccgtgcttcatag 9107485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 16766715 - 16766642
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcata 192  Q
    ||||||||||||| |||||||||||||| |||  ||||||||| | ||||||||||| |||||| || ||||||    
T  16766715 tcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccatgcttcata 16766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 5732551 - 5732614
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatcc 182  Q
    ||||||||||| |||||||||||||||| |||  ||||||||| | ||||||||||| ||||||    
T  5732551 tcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgtgtctgtatcc 5732614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 1681776 - 1681702
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||  |||||||||||| | ||| | |||||||||| ||||| ||||| ||||||||| |||||||    
T  1681776 tcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatccgtgcttcatag 1681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 9027196 - 9027122
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    |||||||||||||||||||||||||||| |||   |||||||| | | ||||||||| ||||| ||| |||||||    
T  9027196 tcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgtccgtatcggtgcttcatag 9027122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 387
Target Start/End: Original strand, 18504920 - 18504953
Alignment:
Q  354 gtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||||    
T  18504920 gtttaattacacttttggtcctcgtgttttggcc 18504953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 15828188 - 15828152
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||||||||||||||||||||    
T  15828188 aaggcttaattacacttttggtcctcgtgttttggcc 15828152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 23073997 - 23074033
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||||||||||||||||||||    
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcc 23074033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 24115890 - 24115966
Alignment:
Q  121 aaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatagcttg 197  Q
    ||||||||||  ||||| |||||||| ||  |||||||||||| ||||| ||||| ||||||||  |||||||||||    
T  24115890 aaattattagttgtgtcagcgtgtcagtgcctatgtcgtgttcggtgtctgtgtctgtatccgtacttcatagcttg 24115966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 387
Target Start/End: Original strand, 10899926 - 10899973
Alignment:
Q  341 ggaaaataaaaagg-tttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  10899926 ggaaaaaaaaaaggctttaattacacttttggtcatcgtgttttggcc 10899973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 11444990 - 11445021
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  11444990 ttaattacacttttggtcctcgtgttttggcc 11445021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 11445529 - 11445498
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  11445529 ttaattacacttttggtcctcgtgttttggcc 11445498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 12935160 - 12935191
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  12935160 ttaattacacttttggtcctcgtgttttggcc 12935191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 20371151 - 20371182
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgt 150  Q
    ||||||||||||||||||||||||||||||||    
T  20371151 tcaaattattagcggtgtcggcgtgtcaatgt 20371182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 20741103 - 20741134
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  20741103 ttaattacacttttggtcctcgtgttttggcc 20741134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 22219895 - 22219864
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  22219895 ttaattacacttttggtcctcgtgttttggcc 22219864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 23075670 - 23075639
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  23075670 ttaattacacttttggtcctcgtgttttggcc 23075639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 28472640 - 28472671
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  28472640 ttaattacacttttggtcctcgtgttttggcc 28472671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 29859829 - 29859860
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  29859829 ttaattacacttttggtcctcgtgttttggcc 29859860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 7977871 - 7977937
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtg 185  Q
    ||||||||||||| |||||||||||||| | |  ||||||||| | |||||||||||  ||||||||    
T  7977871 tcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgtgtccatatccgtg 7977937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 8777014 - 8777088
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||  |||||||||||||| |||   |||||||| |  |||||||||| ||||||||| |||||||    
T  8777014 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtgcttcatag 8777088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 386
Target Start/End: Complemental strand, 11277124 - 11277094
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||    
T  11277124 ttaattacacttttggtcctcgtgttttggc 11277094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 386
Target Start/End: Complemental strand, 12935699 - 12935669
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||    
T  12935699 ttaattacacttttggtcctcgtgttttggc 12935669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 13851754 - 13851680
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    |||||||||||||||||||| ||||||| |||   ||||||||||  |||||||||| | | ||||| |||||||    
T  13851754 tcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttcaatgtccgtgtccgaacccgtgcttcatag 13851680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 386
Target Start/End: Original strand, 15827641 - 15827671
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||    
T  15827641 ttaattacacttttggtcctcgtgttttggc 15827671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 386
Target Start/End: Original strand, 18257140 - 18257170
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||    
T  18257140 ttaattacacttttggtcctcgtgttttggc 18257170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 20741652 - 20741615
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  20741652 aaaggcttaattacactcttggtcctcgtgttttggcc 20741615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 1532260 - 1532201
Alignment:
Q  117 tatcaaattattagcg--gtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgt 174  Q
    ||||||||||||||||  |||||| ||||||| ||||| |||||||||| |||| |||||    
T  1532260 tatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgttcggtgtgcgtgt 1532201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 31470313 - 31470349
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  31470313 aaggcttaattacacttttgatcctcgtgttttggcc 31470349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 16000059 - 16000130
Alignment:
Q  121 aaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcata 192  Q
    ||||||||||  |||||||||||||| ||| | |||||||||| ||||||||||| ||||||||| ||||||    
T  16000059 aaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtgtccgtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 343 - 386
Target Start/End: Original strand, 32534949 - 32534992
Alignment:
Q  343 aaaataaaaaggtttaattacacttttggtcctcgtgttttggc 386  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  32534949 aaaaaaaaaaggtttaattacacttttggtcctcgtgttttggc 32534992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 8383275 - 8383219
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtc 175  Q
    ||||||||||||||||||||||||||||||||   |||||||| | |||||||||||    
T  8383275 tcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtc 8383219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 387
Target Start/End: Original strand, 5136979 - 5137014
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||||||    
T  5136979 aggtttaattacacttttggtcctcgtgttttggcc 5137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 35994778 - 35994852
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||| |||||||| ||||| |||  ||||||||| | |||||| |||| ||||||||| |||||||    
T  35994778 tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatgtccgtatccgtgcttcatag 35994852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 387
Target Start/End: Original strand, 41046700 - 41046734
Alignment:
Q  353 ggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||||||||||||||||||||||||||||||||    
T  41046700 ggtttaattacacttttggtcctcgtgttttggcc 41046734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 37726924 - 37726961
Alignment:
Q  348 aaaaaggtttaattacacttttggtcctcgtgttttgg 385  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  37726924 aaaaaggcttaattacacttttggtcctcgtgttttgg 37726961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 387
Target Start/End: Original strand, 39555575 - 39555612
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  39555575 aaaggcttaattacacttttggtcctcgtgttttggcc 39555612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 27394124 - 27394088
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||||||||||||||||||||    
T  27394124 aaggcttaattacacttttggtcctcgtgttttggcc 27394088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 4275906 - 4275875
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  4275906 ttaattacacttttggtcctcgtgttttggcc 4275875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 5137523 - 5137492
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  5137523 ttaattacacttttggtcctcgtgttttggcc 5137492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 17464494 - 17464525
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  17464494 ttaattacacttttggtcctcgtgttttggcc 17464525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 20840563 - 20840594
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  20840563 ttaattacacttttggtcctcgtgttttggcc 20840594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 387
Target Start/End: Complemental strand, 20841111 - 20841072
Alignment:
Q  348 aaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  20841111 aaaaaggcttaattacacttttggtgctcgtgttttggcc 20841072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 387
Target Start/End: Original strand, 23644457 - 23644496
Alignment:
Q  348 aaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  23644457 aaaaaggcttaattacacttttggtcctcgtattttggcc 23644496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 24301098 - 24301067
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  24301098 ttaattacacttttggtcctcgtgttttggcc 24301067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 384
Target Start/End: Complemental strand, 25612522 - 25612491
Alignment:
Q  353 ggtttaattacacttttggtcctcgtgttttg 384  Q
    ||||||||||||||||||||||||||||||||    
T  25612522 ggtttaattacacttttggtcctcgtgttttg 25612491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 25853237 - 25853268
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  25853237 ttaattacacttttggtcctcgtgttttggcc 25853268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 26837897 - 26837866
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  26837897 ttaattacacttttggtcctcgtgttttggcc 26837866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 385
Target Start/End: Original strand, 31778650 - 31778685
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttgg 385  Q
    ||||| ||||||||||||||||||||||||||||||    
T  31778650 aaaggcttaattacacttttggtcctcgtgttttgg 31778685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 31779194 - 31779163
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  31779194 ttaattacacttttggtcctcgtgttttggcc 31779163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 32535505 - 32535474
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  32535505 ttaattacacttttggtcctcgtgttttggcc 32535474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 39556119 - 39556088
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  39556119 ttaattacacttttggtcctcgtgttttggcc 39556088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 43973982 - 43973951
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  43973982 ttaattacacttttggtcctcgtgttttggcc 43973951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 3164066 - 3164140
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||| |||||| |||| || |||   |||||||| | ||||||||||| ||||||||| |||||||    
T  3164066 tcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcatag 3164140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 4991008 - 4991082
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||| ||||||||||||||| |||||| | |   |||||||||| ||||||||||| |||| |||| |||||||    
T  4991008 tcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgtgtccgtatacgtgtttcatag 4991082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 10335327 - 10335401
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||  |||||||||||||| |||   |||||||| | ||||||||||  ||||||||| |||||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcatag 10335401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 10455804 - 10455734
Alignment:
Q  123 attattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||| |||| ||||||||||||  | |||||||| | |||||||||||  |||||||| |||||||    
T  10455804 attattagcagtgttggcgtgtcaatgcctgtgtcgtgtccagtgtccgtgtctatatccgtgcttcatag 10455734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 15796335 - 15796409
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||| | |||||||||||||| |||   |||||||| | |||||||||||  |||||||| |||||||    
T  15796335 tcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccatatccgtgcttcatag 15796409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 345 - 387
Target Start/End: Complemental strand, 17465045 - 17465003
Alignment:
Q  345 aataaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||    
T  17465045 aataataaggcttaattacatttttggtcctcgtgttttggcc 17465003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 24205082 - 24205156
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||| | |||||||||||||| |||   |||||||| | ||||||||||| || |||||| |||||||    
T  24205082 tcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcatag 24205156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 25064927 - 25064885
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgt 161  Q
    |||||| ||||||||||||||||||||||||| | ||||||||    
T  25064927 tcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgt 25064885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 386
Target Start/End: Original strand, 45965941 - 45965971
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||    
T  45965941 ttaattacacttttggtcctcgtgttttggc 45965971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 384
Target Start/End: Original strand, 27393659 - 27393692
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttg 384  Q
    |||| |||||||||||||||||||||||||||||    
T  27393659 aaggcttaattacacttttggtcctcgtgttttg 27393692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 384
Target Start/End: Complemental strand, 30098310 - 30098277
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttg 384  Q
    |||| |||||||||||||||||||||||||||||    
T  30098310 aaggcttaattacacttttggtcctcgtgttttg 30098277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 51473431 - 51473460
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttgg 385  Q
    ||||||||||||||||||||||||||||||    
T  51473431 ttaattacacttttggtcctcgtgttttgg 51473460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 30104485 - 30104513
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  30104485 ttaattacacttttggtcctcgtgttttg 30104513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Complemental strand, 37222113 - 37222085
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  37222113 ttaattacacttttggtcctcgtgttttg 37222085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 43973444 - 43973472
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  43973444 ttaattacacttttggtcctcgtgttttg 43973472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 29510345 - 29510419
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||| |||||||||||||| |||   |||||||| | |||||| |||||||||||||| |||||||    
T  29510345 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagtatccgtgcttcatag 29510419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 33328156 - 33328192
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||||||||||||||||||||||||||||||||||    
T  33328156 aaggtttaattacacttttggtcctcgtgttttggcc 33328192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 27101533 - 27101459
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||||||||||||||||||||||  || |||| |||  |||| ||||| |||||| || |||||||    
T  27101533 tcaaattattagcggtgtcggcgtgtcaatgtccatatcgtattcgatgtcggtgtctgtatccatgcttcatag 27101459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 11657005 - 11656968
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  11657005 aaaggcttaattacacttttggtcctcgtgttttggcc 11656968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 13225187 - 13225150
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  13225187 aaaggcttaattacacttttggtcctcgtgttttggcc 13225150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 22651994 - 22651917
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatagctt 196  Q
    ||||||||||||| |||||||||||||| |||   |||||||| | ||||| ||||| ||||||||  ||||||||||    
T  22651994 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtatccgtacttcatagctt 22651917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 385
Target Start/End: Complemental strand, 12572396 - 12572364
Alignment:
Q  353 ggtttaattacacttttggtcctcgtgttttgg 385  Q
    |||||||||||||||||||||||||||||||||    
T  12572396 ggtttaattacacttttggtcctcgtgttttgg 12572364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 9178177 - 9178146
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  9178177 ttaattacacttttggtcctcgtgttttggcc 9178146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 11656458 - 11656489
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  11656458 ttaattacacttttggtcctcgtgttttggcc 11656489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 12571866 - 12571897
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  12571866 ttaattacacttttggtcctcgtgttttggcc 12571897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 19176293 - 19176324
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  19176293 ttaattacacttttggtcctcgtgttttggcc 19176324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 19176832 - 19176801
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  19176832 ttaattacacttttggtcctcgtgttttggcc 19176801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 24362243 - 24362318
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatagc 194  Q
    |||||||||||||||||||||||||||  ||| | |||||| | | |||||||| || ||||| ||| ||||||||    
T  24362243 tcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctgtgcttcatagc 24362318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 31133762 - 31133731
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  31133762 ttaattacacttttggtcctcgtgttttggcc 31133731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 34541090 - 34541059
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  34541090 ttaattacacttttggtcctcgtgttttggcc 34541059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 41681137 - 41681168
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  41681137 ttaattacacttttggtcctcgtgttttggcc 41681168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 41681676 - 41681645
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  41681676 ttaattacacttttggtcctcgtgttttggcc 41681645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 386
Target Start/End: Original strand, 9177670 - 9177700
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||    
T  9177670 ttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 9930205 - 9930168
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  9930205 aaaggcttaattacacttttggtcctcgtattttggcc 9930168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 9928912 - 9928940
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttg 9928940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 31133223 - 31133251
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  31133223 ttaattacacttttggtcctcgtgttttg 31133251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 33742925 - 33742953
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  33742925 ttaattacacttttggtcctcgtgttttg 33742953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 44831245 - 44831281
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  44831245 aaggcttaattacacttttggtcctcatgttttggcc 44831281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 15382495 - 15382421
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||| |||||||||||||| |||   |||||||| | ||||||||||| ||||||||| |||||||    
T  15382495 tcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 15382421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 387
Target Start/End: Original strand, 5818928 - 5818963
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||||||    
T  5818928 aggtttaattacacttttggtcctcgtgttttggcc 5818963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 387
Target Start/End: Complemental strand, 15372419 - 15372384
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||||||    
T  15372419 aggtttaattacacttttggtcctcgtgttttggcc 15372384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 26609373 - 26609331
Alignment:
Q  117 tatcaaattattagcggtgtcggcgtgtcaatgtttatgtcgt 159  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  26609373 tatcaaattattagtggtgtcggtgtgtcaatgtttatgtcgt 26609331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 2865310 - 2865266
Alignment:
Q  343 aaaataaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||||    
T  2865310 aaaaaaaataggcttaattacacttttggtcctcgtgttttggcc 2865266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 8461478 - 8461442
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||||||||||||||||||||    
T  8461478 aaggcttaattacacttttggtcctcgtgttttggcc 8461442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 21522766 - 21522694
Alignment:
Q  121 aaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||| |||||||||||||| |||   |||||||| | ||| ||||||| ||||||||| |||||||    
T  21522766 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcatag 21522694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 21533332 - 21533260
Alignment:
Q  121 aaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||| |||||||||||||| |||   |||||||| | ||| ||||||| ||||||||| |||||||    
T  21533332 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcatag 21533260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 5819471 - 5819440
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  5819471 ttaattacacttttggtcctcgtgttttggcc 5819440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Complemental strand, 7349569 - 7349530
Alignment:
Q  346 ataaaaaggtttaattacacttttggtcctcgtgttttgg 385  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  7349569 ataaaatggcttaattacacttttggtcctcgtgttttgg 7349530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 8647441 - 8647472
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  8647441 ttaattacacttttggtcctcgtgttttggcc 8647472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 8647980 - 8647949
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  8647980 ttaattacacttttggtcctcgtgttttggcc 8647949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 387
Target Start/End: Original strand, 18182969 - 18183004
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||||||||||||||||||| |||||||||||||    
T  18182969 aggtttaattacacttttggtcatcgtgttttggcc 18183004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 18183511 - 18183480
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  18183511 ttaattacacttttggtcctcgtgttttggcc 18183480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 19359678 - 19359647
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  19359678 ttaattacacttttggtcctcgtgttttggcc 19359647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 386
Target Start/End: Original strand, 14215244 - 14215274
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||    
T  14215244 ttaattacacttttggtcctcgtgttttggc 14215274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 352 - 386
Target Start/End: Complemental strand, 16019133 - 16019099
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggc 386  Q
    ||||||||||||||||||||||||| |||||||||    
T  16019133 aggtttaattacacttttggtcctcatgttttggc 16019099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 26716162 - 26716120
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgt 161  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||    
T  26716162 tcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgt 26716120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 26985902 - 26985860
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgt 161  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||    
T  26985902 tcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgt 26985860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 28588715 - 28588756
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgt 161  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  28588715 tcaaattattaccggtgtcggcgtgtcaatg-ttatgtcgtgt 28588756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 4222264 - 4222235
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttgg 385  Q
    ||||||||||||||||||||||||||||||    
T  4222264 ttaattacacttttggtcctcgtgttttgg 4222235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 387
Target Start/End: Original strand, 16018586 - 16018623
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  16018586 aaaggcttaattacacttttggtcttcgtgttttggcc 16018623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 41995486 - 41995417
Alignment:
Q  122 aattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcat 191  Q
    |||||||||  |||||||||||||| ||| | |||||| | | ||||||||||| ||||||||| |||||    
T  41995486 aattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 164194 - 164222
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  164194 ttaattacacttttggtcctcgtgttttg 164222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 24331562 - 24331590
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  24331562 ttaattacacttttggtcctcgtgttttg 24331590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 398806 - 398880
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    |||||||||||||||||||||||||||| |||   |||||||| | ||||||| ||| ||||||||| |||||||    
T  398806 tcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcatag 398880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 347 - 387
Target Start/End: Complemental strand, 5540369 - 5540329
Alignment:
Q  347 taaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  5540369 taaaaaggcttaattacacttttggtcctcgtgttttggcc 5540329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 5963125 - 5963089
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||||||||||||||||||||||||||||||||||    
T  5963125 aaggtttaattacacttttggtcctcgtgttttggcc 5963089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 609499 - 609574
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatagc 194  Q
    |||||||||||| ||||||||||||||| |||| ||||||||| |  |||| ||||| |||| |||| ||||||||    
T  609499 tcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgtccgatgtctgtgtccgtatacgtgcttcatagc 609574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 387
Target Start/End: Original strand, 15173095 - 15173130
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||||||    
T  15173095 aggtttaattacacttttggtcctcgtgttttggcc 15173130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 13011257 - 13011319
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatc 181  Q
    ||||||||||||| |||||||| ||||| ||||  |||||||||| ||||||||||| |||||    
T  13011257 tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcggtgtccgtgtctgtatc 13011319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 387
Target Start/End: Complemental strand, 15173646 - 15173604
Alignment:
Q  345 aataaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||| ||| ||||||||||||||||||||||||||||||||    
T  15173646 aataaataggcttaattacacttttggtcctcgtgttttggcc 15173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 10572630 - 10572683
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgt 172  Q
    |||||||||||| ||||||||||||||| |||| ||||||||| | ||||||||    
T  10572630 tcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgt 10572683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 50970826 - 50970789
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  50970826 aaaggcttaattacacttttggtcctcgtgttttggcc 50970789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 387
Target Start/End: Complemental strand, 4636522 - 4636482
Alignment:
Q  347 taaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  4636522 taaaaatgcttaattacacttttggtcctcgtgttttggcc 4636482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 15646742 - 15646706
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||||||||||||||||||||    
T  15646742 aaggcttaattacacttttggtcctcgtgttttggcc 15646706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 39154567 - 39154531
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||||||||||||||||||||    
T  39154567 aaggcttaattacacttttggtcctcgtgttttggcc 39154531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 5539819 - 5539850
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  5539819 ttaattacacttttggtcctcgtgttttggcc 5539850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 8678544 - 8678575
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  8678544 ttaattacacttttggtcctcgtgttttggcc 8678575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 8679083 - 8679052
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  8679083 ttaattacacttttggtcctcgtgttttggcc 8679052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 9018976 - 9019007
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  9018976 ttaattacacttttggtcctcgtgttttggcc 9019007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 21856585 - 21856554
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  21856585 ttaattacacttttggtcctcgtgttttggcc 21856554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 351 - 386
Target Start/End: Original strand, 29869618 - 29869653
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggc 386  Q
    |||| |||||||||||||||||||||||||||||||    
T  29869618 aaggcttaattacacttttggtcctcgtgttttggc 29869653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 29870161 - 29870130
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  29870161 ttaattacacttttggtcctcgtgttttggcc 29870130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 33144461 - 33144430
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  33144461 ttaattacacttttggtcctcgtgttttggcc 33144430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 50970281 - 50970312
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  50970281 ttaattacacttttggtcctcgtgttttggcc 50970312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 157
Target Start/End: Complemental strand, 36878479 - 36878441
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtc 157  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  36878479 tcaaattattagcggtgtcggcgtgtcagtgtctatgtc 36878441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 18984122 - 18984151
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttgg 385  Q
    ||||||||||||||||||||||||||||||    
T  18984122 ttaattacacttttggtcctcgtgttttgg 18984151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 38078702 - 38078774
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatagctt 196  Q
    ||||||||||||| |||||| ||||||| ||||     ||||| | ||||||||||| ||||||||| ||||||||||    
T  38078702 tcaaattattagctgtgtcgacgtgtcagtgtt-----cgtgtccggtgtccgtgtccgtatccgtgcttcatagctt 38078774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 47826967 - 47826996
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttgg 385  Q
    ||||||||||||||||||||||||||||||    
T  47826967 ttaattacacttttggtcctcgtgttttgg 47826996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Complemental strand, 9019505 - 9019477
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  9019505 ttaattacacttttggtcctcgtgttttg 9019477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 10577783 - 10577851
Alignment:
Q  126 attagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatagc 194  Q
    |||||| |||||||||||||  |||   |||||||| | ||||||||||| ||||||||| ||||||||    
T  10577783 attagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatagc 10577851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 18984666 - 18984630
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| |||||||||||||||||||| |||||||||||    
T  18984666 aaggcttaattacacttttggtccttgtgttttggcc 18984630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 21856045 - 21856073
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  21856045 ttaattacacttttggtcctcgtgttttg 21856073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 52268288 - 52268324
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  52268288 aaggcttaattacacttttggtcctcgtattttggcc 52268324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Complemental strand, 52269290 - 52269262
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  52269290 ttaattacacttttggtcctcgtgttttg 52269262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 40027688 - 40027651
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40027688 aaaggtttaattacacttttggtcctcgtgttttggcc 40027651  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 387
Target Start/End: Original strand, 11090520 - 11090555
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||||||    
T  11090520 aggtttaattacacttttggtcctcgtgttttggcc 11090555  T

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Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 387
Target Start/End: Complemental strand, 40815891 - 40815856
Alignment:
Q  352 aggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||||||    
T  40815891 aggtttaattacacttttggtcctcgtgttttggcc 40815856  T

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Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 387
Target Start/End: Original strand, 14432142 - 14432176
Alignment:
Q  353 ggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||||||||||||||||||||||||||||||||||    
T  14432142 ggtttaattacacttttggtcctcgtgttttggcc 14432176  T

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Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 18276539 - 18276466
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcata 192  Q
    |||||||||||||||||||||| | ||| ||| | | |||||| | ||||||||||| ||||||||| ||||||    
T  18276539 tcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgtatccgtgcttcata 18276466  T

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Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 387
Target Start/End: Original strand, 20444746 - 20444783
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  20444746 aaaggcttaattacacttttggtcctcgtgttttggcc 20444783  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 387
Target Start/End: Complemental strand, 11091071 - 11091031
Alignment:
Q  347 taaaaaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||| ||||||||||||||||||||||||||||||||    
T  11091071 taaataggcttaattacacttttggtcctcgtgttttggcc 11091031  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 18450828 - 18450864
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||||||||||||||||||||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcc 18450864  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 21616780 - 21616708
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcat 191  Q
    |||||||||||||||||||||||||||  |||   ||||||||  |||||| ||||| ||||||||| |||||    
T  21616780 tcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtgcttcat 21616708  T

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Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 28617161 - 28617125
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| ||||||||||||||||||||||||||||||||    
T  28617161 aaggcttaattacacttttggtcctcgtgttttggcc 28617125  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 18451373 - 18451342
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  18451373 ttaattacacttttggtcctcgtgttttggcc 18451342  T

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Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 20440573 - 20440542
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  20440573 ttaattacacttttggtcctcgtgttttggcc 20440542  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 21624282 - 21624231
Alignment:
Q  121 aaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgt 172  Q
    ||||||||||| |||||||||||||| ||| | |||||||||| ||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgt 21624231  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 22374323 - 22374354
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  22374323 ttaattacacttttggtcctcgtgttttggcc 22374354  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 22374867 - 22374836
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  22374867 ttaattacacttttggtcctcgtgttttggcc 22374836  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 351 - 386
Target Start/End: Original strand, 26538095 - 26538130
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggc 386  Q
    |||| |||||||||||||||||||||||||||||||    
T  26538095 aaggcttaattacacttttggtcctcgtgttttggc 26538130  T

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Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 26538621 - 26538590
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  26538621 ttaattacacttttggtcctcgtgttttggcc 26538590  T

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Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 28616616 - 28616647
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  28616616 ttaattacacttttggtcctcgtgttttggcc 28616647  T

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Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 40815348 - 40815379
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  40815348 ttaattacacttttggtcctcgtgttttggcc 40815379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 386
Target Start/End: Original strand, 8972240 - 8972270
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||    
T  8972240 ttaattacacttttggtcctcgtgttttggc 8972270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 12224239 - 12224185
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtg 173  Q
    |||||||||||||  ||| ||||||||||||||| |||||||||| || ||||||    
T  12224239 tcaaattattagctatgttggcgtgtcaatgtttgtgtcgtgttcggtatccgtg 12224185  T

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Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 21782859 - 21782901
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgt 161  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||    
T  21782859 tcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgt 21782901  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 15551502 - 15551531
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttgg 385  Q
    ||||||||||||||||||||||||||||||    
T  15551502 ttaattacacttttggtcctcgtgttttgg 15551531  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 355 - 387
Target Start/End: Original strand, 8425357 - 8425389
Alignment:
Q  355 tttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||| |||||||||||    
T  8425357 tttaattacacttttggtccttgtgttttggcc 8425389  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 34337217 - 34337289
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcat 191  Q
    ||||||||| | | ||||||||||||||||||   |||||| | | || |||||||| |||||||||||||||    
T  34337217 tcaaattatcaactgtgtcggcgtgtcaatgtccgtgtcgtatacggtatccgtgtccgtatccgtgattcat 34337289  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 35779711 - 35779739
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttg 384  Q
    |||||||||||||||||||||||||||||    
T  35779711 ttaattacacttttggtcctcgtgttttg 35779739  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 40027138 - 40027174
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttggcc 387  Q
    |||| |||||||||||||||||| |||||||||||||    
T  40027138 aaggcttaattacacttttggtcatcgtgttttggcc 40027174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 64853 - 64817
Alignment:
Q  350 aaaggtttaattacacttttggtcctcgtgttttggc 386  Q
    |||||||||||||||||||||||||||||||||||||    
T  64853 aaaggtttaattacacttttggtcctcgtgttttggc 64817  T

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Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 225309 - 225385
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatagct 195  Q
    ||||||||||| | |||||||||||||| |||   |||||||| | ||||||||||| || |||||| |||||||||    
T  225309 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgtttcatagct 225385  T

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Target: scaffold0007; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 384
Target Start/End: Original strand, 64300 - 64333
Alignment:
Q  351 aaggtttaattacacttttggtcctcgtgttttg 384  Q
    |||| |||||||||||||||||||||||||||||    
T  64300 aaggcttaattacacttttggtcctcgtgttttg 64333  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 8816 - 8742
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||||| |||||||||||||| |||   |||||||| | ||||||||||| |||||| || |||||||    
T  8816 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcatag 8742  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 503 - 575
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcat 191  Q
    ||||||||||||| |||||||||| ||| |||   || ||||||| ||||||||||| ||||||||| |||||    
T  503 tcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgtatccgtgcttcat 575  T

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Target: scaffold0951 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 2209 - 2178
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  2209 ttaattacacttttggtcctcgtgttttggcc 2178  T

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Target: scaffold0417 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 11165 - 11134
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  11165 ttaattacacttttggtcctcgtgttttggcc 11134  T

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Target: scaffold0295 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 4796 - 4827
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  4796 ttaattacacttttggtcctcgtgttttggcc 4827  T

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Target: scaffold0295; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 5333 - 5302
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  5333 ttaattacacttttggtcctcgtgttttggcc 5302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 19163 - 19132
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  19163 ttaattacacttttggtcctcgtgttttggcc 19132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 9909 - 9842
Alignment:
Q  126 attagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    |||||| |||||||||||||  |||  ||||||||| | ||||||||||| ||||||||| |||||||    
T  9909 attagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 9842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 134215 - 134184
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttggcc 387  Q
    ||||||||||||||||||||||||||||||||    
T  134215 ttaattacacttttggtcctcgtgttttggcc 134184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 46700 - 46626
Alignment:
Q  119 tcaaattattagcggtgtcggcgtgtcaatgtttatgtcgtgttctgtgtccgtgtcagtatccgtgattcatag 193  Q
    ||||||||||| | |||||||||||||| |||   |||||||| |  |||||||||| ||||||||| |||||||    
T  46700 tcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcatag 46626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 10414 - 10385
Alignment:
Q  356 ttaattacacttttggtcctcgtgttttgg 385  Q
    ||||||||||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttgg 10385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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