View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9670_low_40 (Length: 249)

Name: NF9670_low_40
Description: NF9670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9670_low_40
NF9670_low_40
[»] chr5 (4 HSPs)
chr5 (11-249)||(36734060-36734298)
chr5 (153-249)||(30189747-30189843)
chr5 (117-209)||(26059522-26059613)
chr5 (14-209)||(24850882-24851076)
[»] chr6 (4 HSPs)
chr6 (13-247)||(23089211-23089445)
chr6 (15-90)||(20113859-20113934)
chr6 (13-67)||(22785287-22785341)
chr6 (145-249)||(14797912-14798016)
[»] chr4 (11 HSPs)
chr4 (13-96)||(17379542-17379625)
chr4 (108-183)||(20848524-20848599)
chr4 (13-66)||(11093105-11093158)
chr4 (13-90)||(13936852-13936929)
chr4 (153-249)||(11093233-11093329)
chr4 (145-228)||(13907577-13907659)
chr4 (13-94)||(12461235-12461316)
chr4 (153-242)||(13936701-13936789)
chr4 (150-213)||(31935581-31935643)
chr4 (13-67)||(20848638-20848692)
chr4 (14-90)||(7186138-7186214)
[»] scaffold0171 (1 HSPs)
scaffold0171 (16-234)||(4272-4489)
[»] chr3 (3 HSPs)
chr3 (157-227)||(16230979-16231049)
chr3 (13-58)||(30104170-30104215)
chr3 (13-57)||(8901232-8901276)
[»] chr8 (2 HSPs)
chr8 (153-214)||(16217460-16217521)
chr8 (12-56)||(16217617-16217661)
[»] scaffold0120 (2 HSPs)
scaffold0120 (153-208)||(30968-31023)
scaffold0120 (14-75)||(21402-21463)
[»] chr7 (1 HSPs)
chr7 (153-247)||(17149603-17149698)
[»] chr2 (1 HSPs)
chr2 (145-208)||(43645652-43645715)


Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 36734298 - 36734060
Alignment:
Q  11 cagagaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaattcgaatgattagaatttctgttttgaattcttaagttgaaatgt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36734298 cagagaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaattcgaatgattagaatttctgttttgaattcttaagttgaaatgt 36734199  T
Q  111 gaaattgtttgagagaaaatcaggattttgaataaaaagtcattttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36734198 gaaattgtttgagagaaaatcaggattttgaataaaaagtcattttaagcacttttgtaaaataagtcattttagagtgggatgaattaagttgttttga 36734099  T
Q  211 gttataaaaccatgttttcaagtgtaatttgattggtct 249  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36734098 gttataaaaccatgttttcaagtgtaatttgattggtct 36734060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 30189747 - 30189843
Alignment:
Q  153 ttttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttgagttataaaaccatgttttcaagtgtaatttgattggtct 249  Q
    ||||||||||||||| |||||||||||||||  | |    |||||||||||||||||||||| |||||||||||||||||| || ||||| ||||||    
T  30189747 ttttaagcacttttgaaaaataagtcatttttagcttatttgaattaagttgttttgagttacaaaaccatgttttcaagtatagtttgagtggtct 30189843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 26059613 - 26059522
Alignment:
Q  117 gtttgagagaaaatcaggattttgaataaaaagtcattttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttg 209  Q
    ||||| |||||||||||  ||||||  |||||| |||||||||||||||||  |||||||||||||| | |||   |||||||||||||||||    
T  26059613 gtttgggagaaaatcagatttttgagcaaaaagccattttaagcacttttgagaaataagtcatttt-gagtgaattgaattaagttgttttg 26059522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 24850882 - 24851076
Alignment:
Q  14 agaagtttgattttgatgaatttaagtggatt-gatgaagttgttagaatgaattcgaatgattagaatttctgttttgaattcttaagttgaaatgtga 112  Q
    ||||||||||||||||||||||| ||| |||  || |  |||||||  ||||||| ||||||||||||||||| |||| |||   |  |||    || |     
T  24850882 agaagtttgattttgatgaatttgagtagataagagg--gttgttatgatgaattagaatgattagaatttctattttcaatcaatgtgttttggtgagg 24850979  T
Q  113 aattgtttgagagaaaatcaggattttgaataaaaagtcattttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttg 209  Q
    ||| ||||| |||||||||||| |||||  | ||||    |||||||||||||||| |||||||||||||| | ||  | ||||| |||||||||||    
T  24850980 aatcgtttgggagaaaatcaggtttttgtgtcaaaatctgttttaagcacttttgtgaaataagtcattttggagtaagttgaatcaagttgttttg 24851076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 23089211 - 23089445
Alignment:
Q  13 gagaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaattcgaatgattagaatttctgttttgaattcttaagttgaaa-tgtg 111  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||    |||||| | |||||| || |||||||||||||| ||||||||     | ||    
T  23089211 gagaagtttgattttggtgaattcaagtgaattgatgatgttgttgtggtgaattagcatgattggattttctgttttgaat-cttaagttttgggtatg 23089309  T
Q  112 aaattgtttgagagaaaatcaggattttgaataaaaagtcattttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttgag 211  Q
    | |||||||| ||||||||   | |||||| ||||||||  |||||||| |||||||||||||||||||||| |||||   |||||||||||||||||||    
T  23089310 agattgtttgggagaaaattgagtttttgagtaaaaagttgttttaagcccttttgtaaaataagtcattttggggtgttttgaattaagttgttttgag 23089409  T
Q  212 ttataaaaccatgttttcaagtgtaatttgattggt 247  Q
    || ||| ||| ||||||||||| || ||||||||||    
T  23089410 ttgtaagaccttgttttcaagtatagtttgattggt 23089445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 20113934 - 20113859
Alignment:
Q  15 gaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaattcgaatgattagaatttctgtttt 90  Q
    |||||||||||||||||||||| | || | ||||||||||||||| ||||||| |||||| |||||||||| ||||    
T  20113934 gaagtttgattttgatgaatttgaatgaagtgatgaagttgttaggatgaattagaatgaatagaatttctttttt 20113859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 22785287 - 22785341
Alignment:
Q  13 gagaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaatt 67  Q
    |||||||||||||||||||||||| |||||||| ||| ||| ||||  |||||||    
T  22785287 gagaagtttgattttgatgaatttgagtggattaatggagtggttatgatgaatt 22785341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 14798016 - 14797912
Alignment:
Q  145 aaaagtcatttt-aagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttgagttataaaaccatgttttcaagtgtaatttgat 243  Q
    |||||||||||| |||||||||||| || ||| ||||||| ||||| | |  || |||||||||||||||  ||  |||||||||||||| | ||| |||    
T  14798016 aaaagtcatttttaagcacttttgtgaa-taattcattttggggtgagtttgatcaagttgttttgagtttaaatgccatgttttcaagtattattggat 14797918  T
Q  244 tggtct 249  Q
    ||||||    
T  14797917 tggtct 14797912  T

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Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 17379625 - 17379542
Alignment:
Q  13 gagaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaattcgaatgattagaatttctgttttgaattc 96  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||  ||| ||  | || ||||||||||||||||||||||    
T  17379625 gagaagtttgattttgatgaatttaaatggactgatgaagttgttaggttgagttatagtgtttagaatttctgttttgaattc 17379542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 20848599 - 20848524
Alignment:
Q  108 tgtgaaattgtttgagagaaaatcaggattttgaataaaaagtcattttaagcacttttgtaaaataagtcatttt 183  Q
    |||||||| || || | |||||||| | |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  20848599 tgtgaaatcgtatgggtgaaaatcaagtttttgagtaaaaagtcattttaagcacttttgcaaaataagtcatttt 20848524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 11093105 - 11093158
Alignment:
Q  13 gagaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaat 66  Q
    |||||||||||||||||||||||| | || | ||||||||||||||||||||||    
T  11093105 gagaagtttgattttgatgaatttgaatgaagtgatgaagttgttagaatgaat 11093158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 13936929 - 13936852
Alignment:
Q  13 gagaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaattcgaatgattagaatttctgtttt 90  Q
    |||||||||||||||||||||||| | |||||| |||   ||||||  ||||||| | ||||||||||||||||||||    
T  13936929 gagaagtttgattttgatgaatttgaatggattaatgggattgttatgatgaattaggatgattagaatttctgtttt 13936852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 11093233 - 11093329
Alignment:
Q  153 ttttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttgagttataaaaccatgttttcaagtgtaatttgattggtct 249  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||  ||||||| ||||    || ||||||||||||| |||| || ||||| ||||||    
T  11093233 ttttaagcacttttgaaaaataagtcattttggggtgtgatggtttaagttattttatactagaaaaccatgttttaaagtatagtttgaatggtct 11093329  T

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Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 13907577 - 13907659
Alignment:
Q  145 aaaagtcattttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttgagttataaaaccatgtttt 228  Q
    ||||||| |||||||||||||||| |||||||| ||||| ||||| | ||||||||||| | ||| ||| |||||| |||||||    
T  13907577 aaaagtcgttttaagcacttttgtgaaataagttattttggggtgagttgaattaagtt-tattgggttgtaaaactatgtttt 13907659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 12461316 - 12461235
Alignment:
Q  13 gagaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaattcgaatgattagaatttctgttttgaat 94  Q
    |||||||||||||||||||| ||| | |||||| ||||||||||| |  ||| || ||  |||||||| |||||||||||||    
T  12461316 gagaagtttgattttgatgattttgaatggattaatgaagttgttgggttgagttagatggattagaaattctgttttgaat 12461235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 13936789 - 13936701
Alignment:
Q  153 ttttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttgagttataaaaccatgttttcaagtgtaatttga 242  Q
    |||||||||||||||  ||||||| |||||| |||||   ||||| ||||||||||||||| |||||  |||||||||||| || |||||    
T  13936789 ttttaagcacttttgcgaaataagccattttggggtgaattgaat-aagttgttttgagttttaaaataatgttttcaagtatagtttga 13936701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 31935643 - 31935581
Alignment:
Q  150 tcattttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttgagtt 213  Q
    |||||||||||||||||| |||||||||||||||  | |||  | |||||||||||||||||||    
T  31935643 tcattttaagcacttttg-aaaataagtcattttgtgttggtttaaattaagttgttttgagtt 31935581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 20848692 - 20848638
Alignment:
Q  13 gagaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaatt 67  Q
    |||||||||||||||||||||||| | |||||| ||| ||||||||  |||||||    
T  20848692 gagaagtttgattttgatgaatttgaatggattaatggagttgttatgatgaatt 20848638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 7186138 - 7186214
Alignment:
Q  14 agaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaattcgaatgattagaatttctgtttt 90  Q
    |||||||||||||||||||  || | || ||| | ||||||||||||||||||| | |||||  || ||||||||||    
T  7186138 agaagtttgattttgatgatgttgaatgaattaaggaagttgttagaatgaattaggatgatatgattttctgtttt 7186214  T

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Target: scaffold0171 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 4489 - 4272
Alignment:
Q  16 aagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaattcgaatgattagaatttctgttttgaattcttaagttgaaatgtgaaat 115  Q
    |||| |||||||||||| ||| | |||||| ||| ||||||||   | || | || ||| | |||||||||||||||||| ||| |||    || | |||    
T  4489 aagtatgattttgatgattttgaatggattcatggagttgttatgttaaaatggattgagtggaatttctgttttgaattgttatgttttggtgaggaat 4390  T
Q  116 tgtttgagagaaaatcaggattttgaataaaaagtcattttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttgagttat 215  Q
     ||||  ||||||||| || |||||||  ||||||  |||||||||||||||| |||||||| ||||| |||||   ||||||||||| ||||| ||||     
T  4389 cgtttaggagaaaatcgggtttttgaactaaaagtggttttaagcacttttgtgaaataagttatttt-gggtgttttgaattaagttattttgggttag 4291  T
Q  216 aaaaccatgttttcaagtg 234  Q
    ||||||||||||| |||||    
T  4290 aaaaccatgtttttaagtg 4272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 16230979 - 16231049
Alignment:
Q  157 aagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttgagttataaaaccatgttt 227  Q
    |||||||||| | |||||||||||||| | ||| | ||||| |||||||||||||||||||||||||||||    
T  16230979 aagcacttttatgaaataagtcattttggagtgagttgaatcaagttgttttgagttataaaaccatgttt 16231049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 30104170 - 30104215
Alignment:
Q  13 gagaagtttgattttgatgaatttaagtggattgatgaagttgtta 58  Q
    |||||||||||||||||||||||| |||||||| ||| | ||||||    
T  30104170 gagaagtttgattttgatgaatttgagtggattaatggaattgtta 30104215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 8901276 - 8901232
Alignment:
Q  13 gagaagtttgattttgatgaatttaagtggattgatgaagttgtt 57  Q
    |||||||||||||||||||||||| | || | |||||||||||||    
T  8901276 gagaagtttgattttgatgaatttgaatgaagtgatgaagttgtt 8901232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 16217521 - 16217460
Alignment:
Q  153 ttttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgttttgagtta 214  Q
    ||||||||||||| || |||||||||||||| ||||| ||| ||||||||||||||||||||    
T  16217521 ttttaagcactttcgtgaaataagtcattttggggtgagataaattaagttgttttgagtta 16217460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 16217661 - 16217617
Alignment:
Q  12 agagaagtttgattttgatgaatttaagtggattgatgaagttgt 56  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||    
T  16217661 agagaagtttgattttgatgaatttgaatggattaatgaagttgt 16217617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 31023 - 30968
Alignment:
Q  153 ttttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgtttt 208  Q
    |||||||| ||||||||||||||||||||||||| || | |  |||||||||||||    
T  31023 ttttaagcgcttttgtaaaataagtcattttaggatgagtttgattaagttgtttt 30968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 21463 - 21402
Alignment:
Q  14 agaagtttgattttgatgaatttaagtggattgatgaagttgttagaatgaattcgaatgat 75  Q
    |||||||||||||||||||  || ||||  || | ||||||||||||||||||||| |||||    
T  21463 agaagtttgattttgatgatgttgagtgagttaaggaagttgttagaatgaattcggatgat 21402  T

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Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 17149603 - 17149698
Alignment:
Q  153 ttttaagcacttttgtaaaataagtcattttaggg-tgggatgaattaagttgttttgagttataaaaccatgttttcaagtgtaatttgattggt 247  Q
    |||||||||| ||||| ||||||||||||||   | || ||||| ||||||| |||||   ||||||||||||||||||||| || ||||| ||||    
T  17149603 ttttaagcacatttgttaaataagtcatttttttgctgtgatgagttaagttattttgtactataaaaccatgttttcaagtatagtttgaatggt 17149698  T

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Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 43645715 - 43645652
Alignment:
Q  145 aaaagtcattttaagcacttttgtaaaataagtcattttagggtgggatgaattaagttgtttt 208  Q
    |||||| ||||||||| |||||||||||||||||||||| || || | |  |||||||||||||    
T  43645715 aaaagtgattttaagcgcttttgtaaaataagtcattttgggatgagtttgattaagttgtttt 43645652  T

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