View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9670_low_41 (Length: 247)
Name: NF9670_low_41
Description: NF9670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9670_low_41 |
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Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 3361442 - 3361656
Alignment:
| Q |
16 |
attctcaaggcacaagagatcattttcgagtttctcaatttcaacatctgccttggtgttcaaaattctcaaaacttgaacacatgattccacattcaag |
115 |
Q |
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| T |
3361442 |
attctcaaggcacaagagatcattttcgagtttctcaatttcaacatctgccttggtgttcaaaattctcaaaacttgaacacatgattccacattcaag |
3361541 |
T |
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| Q |
116 |
gcatgttcttcaatctcatctgcaaaactcaacagaaagctacagtaaattatcaacatacacggtgggatttatctcctcgaattagtcagtcctatgg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||||||| |
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| T |
3361542 |
gcatgttcttcaatctcatctgcaaaactcaacagaaagctacagtaaattatcaacatagacggttgaatttgtctcctcgaattagtcagtcctatgg |
3361641 |
T |
|
| Q |
216 |
ttcggataccaaaat |
230 |
Q |
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|||||||||| |||| |
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| T |
3361642 |
ttcggataccgaaat |
3361656 |
T |
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