View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9673_low_1 (Length: 434)
Name: NF9673_low_1
Description: NF9673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9673_low_1 |
 |  |
|
| [»] scaffold0035 (3 HSPs) |
 |  |  |
|
| [»] scaffold0855 (2 HSPs) |
 |  |  |
|
| [»] scaffold0847 (2 HSPs) |
 |  |  |
|
| [»] scaffold0157 (1 HSPs) |
 |  |  |
|
| [»] scaffold0088 (1 HSPs) |
 |  |  |
|
| [»] scaffold0094 (1 HSPs) |
 |  |  |
|
| [»] scaffold0014 (1 HSPs) |
 |  |  |
|
| [»] scaffold1323 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 380; Significance: 0; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 16 - 424
Target Start/End: Complemental strand, 4328922 - 4328514
Alignment:
| Q |
16 |
agtatatgatatccagccccgttaaagacagacacggtccgtgcatgtacaggcacgaccgtgccaagtcccagactgctatgttttgttatttttcaga |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4328922 |
agtatatgatatccagccccgttaaagacagacacggtccgtgcctgtacaggcacgaccgtgccaagtcccagactgctatgttttgttatttttcaga |
4328823 |
T |
 |
| Q |
116 |
cccaaaagtccatgggttgcttgctatgtaatgtttgtaccttttttagggcttaagttagcttttaggctataaaaagagcagccaacaaacttattat |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4328822 |
cccaaaagtccatgggttgcttgctatgtaatgtttgtaccttttttagggcttaagttagcttttaggctataaaaagagcagccaacagacttattat |
4328723 |
T |
 |
| Q |
216 |
tcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttcttattttcttgttatttatttttatgtcnnnnnnngaaccaataa |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4328722 |
tcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttcttattttcttgttatttatttttatgtctttttttgaaccaataa |
4328623 |
T |
 |
| Q |
316 |
tcccgaggcgctttttattattaattttatcaatcaaaaatccaaactttttaacctttaaactttcagctaatcacctttaaaaagagaatcacaatta |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4328622 |
tcccgaggcgctttttattattaattttatcaatcaaaaatccaaactttttaacctttaaactttcagctaatcacctttaaaaagagaatcacaatta |
4328523 |
T |
 |
| Q |
416 |
caacaactc |
424 |
Q |
| |
|
||||||||| |
|
|
| T |
4328522 |
caacaactc |
4328514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 64 - 298
Target Start/End: Complemental strand, 4317219 - 4316984
Alignment:
| Q |
64 |
acaggcacgaccgtgccaagtcccagactgctatgttttgttatttttcagacccaaaagtccatgggttgcttgctatgtaatgtttgtacctttt-tt |
162 |
Q |
| |
|
||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| | |||||| || |
|
|
| T |
4317219 |
acaggcacgactgtgccatgtcccaggctggtatgttttgttatttttcagacctaaaagcccatgggttgcttgatatgtaatgtttatgccttttctt |
4317120 |
T |
 |
| Q |
163 |
agggcttaagttagcttttaggctataaaaagagcagccaacaaacttattattcatcttttattattgggaattttccgcgacaattatttctttgaat |
262 |
Q |
| |
|
||||||||||||| |||||||||| |||| |||||||||| || |||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
4317119 |
agggcttaagttaacttttaggctgtaaatagagcagccatcagacttattattcatcttttgttattgggaattttctgtgacaattatttctttgaat |
4317020 |
T |
 |
| Q |
263 |
aaaagttcttattttcttgttatttatttttatgtc |
298 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
4317019 |
aaaagtttttagtttcttgttatttatttttatgtc |
4316984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 306 - 428
Target Start/End: Complemental strand, 4316570 - 4316448
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaattttatcaatcaaaaatccaaactttttaacctttaaactttcagctaatcacctttaaaaagaga |
405 |
Q |
| |
|
|||||||||||||| | |||||||||| |||||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4316570 |
gaaccaataatcccaatgcgctttttaatattaattttatcaataaaaaacccaaactttataacctataaactttcagctaatcacctttaaaaagaga |
4316471 |
T |
 |
| Q |
406 |
atcacaattacaacaactctctg |
428 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
4316470 |
atcacaattacaacaactctctg |
4316448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 306 - 424
Target Start/End: Complemental strand, 25033856 - 25033737
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaatttta--tcaatcaaaaatccaaactttttaacctttaaactttcagctaatcacctttaaaaaga |
403 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||| || |||||| |||||||||||||||| ||||||||| |
|
|
| T |
25033856 |
gaaccaataatcccgagacgctttttatttttaattttacatcaatcaaaa-tccaaacttttcaaactttaatctttcagctaatcaccgttaaaaaga |
25033758 |
T |
 |
| Q |
404 |
gaatcacaattacaacaactc |
424 |
Q |
| |
|
|||||| |||||||||||||| |
|
|
| T |
25033757 |
gaatcataattacaacaactc |
25033737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 6712670 - 6712521
Alignment:
| Q |
107 |
tttttcagacccaaaagtccatgggttgcttgctatgtaatgtttgtacctttt-ttagggcttaagttagcttttaggctataaaaagagcagccaaca |
205 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||||||| | |||||| |||||| |||||||||||||||||||||||| |||||||||| | |
|
|
| T |
6712670 |
tttttcagacgtaaaagcccatgggttgcttgctatgtaatgtttatgccttttcttagggtttaagttagcttttaggctataaatagagcagccacta |
6712571 |
T |
 |
| Q |
206 |
-aacttattattcatcttttattattgggaattttccgcgacaattattt |
254 |
Q |
| |
|
| ||||| ||||||||||| || ||||||||| | | ||||||||||| |
|
|
| T |
6712570 |
gaccttatgattcatcttttgttcttgggaattctatgtgacaattattt |
6712521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 161 - 297
Target Start/End: Complemental strand, 679632 - 679492
Alignment:
| Q |
161 |
ttagggcttaagttagcttttaggctataaaaagagcagccaacaaacttattat-tcatcttttattattgggaattttccgcgacaattatttctttg |
259 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||||||| | || |||| | || ||||||||| || ||| |||| | | |||||||||||||||| |
|
|
| T |
679632 |
ttagggcttaagttag-ttttaggctataaaaggagcagctagcagacttgtaatctcatcttttgttcttgaaaattctaagtgacaattatttctttg |
679534 |
T |
 |
| Q |
260 |
aataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
679533 |
aataaaagttcttctttattttcttgttatttacttttatgt |
679492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 282
Target Start/End: Original strand, 10018882 - 10019051
Alignment:
| Q |
114 |
gacccaaaagtccatgggttgcttgctatgtaatgtttgtacctttt-ttagggcttaagttagcttttaggctataaaaagagcagccaacaaactt-a |
211 |
Q |
| |
|
|||| ||||| |||||||||||||||| ||| || || | |||||| ||| |||||||||||||||| |||||||||| ||||||||| | || | | |
|
|
| T |
10018882 |
gacctaaaagcccatgggttgcttgctttgttattattattccttttcttatggcttaagttagcttt-aggctataaatcgagcagccattagacatga |
10018980 |
T |
 |
| Q |
212 |
ttattcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttcttattttcttgt |
282 |
Q |
| |
|
|| |||||||||| || ||||||||| | | |||||||||||| | ||| ||||||||||||||||||| |
|
|
| T |
10018981 |
ttcttcatcttttgttcttgggaattctttgtgacaattatttccattaatcaaagttcttattttcttgt |
10019051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 430
Target Start/End: Complemental strand, 6711980 - 6711861
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaatttt-atcaatcaaaaatccaaactttttaacctttaaactttcagctaatcacctttaaaaagag |
404 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| || |||| |||||| |||||||| || |||||| ||||| |||||| ||||| |||| |
|
|
| T |
6711980 |
gaaccaataatcccgagacgctttttattattaattttcattaatc-aaaatcaaaacttttcaaactttaatctttc-----atcaccattaaatagag |
6711887 |
T |
 |
| Q |
405 |
aatcacaattacaacaactctctgct |
430 |
Q |
| |
|
||||| ||||||| || ||| ||||| |
|
|
| T |
6711886 |
aatcaaaattacatcacctccctgct |
6711861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 38877362 - 38877496
Alignment:
| Q |
164 |
gggcttaagttagcttttaggctataaaaagagcagccaacaaacttat-tattcatcttttattattgggaattttccgcgacaattatttctttgaat |
262 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||| | ||||| ||| | |||||||||| || |||| |||| | | ||||||| ||||||||||| |
|
|
| T |
38877362 |
gggcttaagttag-ttttaggctataaatagagcagatagcaaacatatattttcatcttttgttcttggaaattataagtgacaattgtttctttgaat |
38877460 |
T |
 |
| Q |
263 |
aaaagttc---ttattttcttgttatttatttttat |
295 |
Q |
| |
|
|||||||| ||| |||||||||||||| |||||| |
|
|
| T |
38877461 |
aaaagttctctttactttcttgttatttacttttat |
38877496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 4541779 - 4541817
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaatttta |
344 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
4541779 |
gaaccaataatcccaaggcgctttttattattattttta |
4541817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 2325316 - 2325284
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattatta |
338 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |
|
|
| T |
2325316 |
gaaccaataatcccgaggctctttttattatta |
2325284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 4983200 - 4983143
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
4983200 |
gacaattgtttctttgaataaaagttcatctttattttcttgttatttacctttatgt |
4983143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 16076877 - 16076820
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
16076877 |
gacaattgtttctttgaataaaagttcacctttactttcttgttatttacttttatgt |
16076820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 114; Significance: 1e-57; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 91 - 282
Target Start/End: Complemental strand, 22578561 - 22578368
Alignment:
| Q |
91 |
ctgctatgttttgttatttttcagacccaaaagtccatgggttgctt-gctatgtaatgtttgtacctttt-ttagggcttaagttagcttttaggctat |
188 |
Q |
| |
|
||||||||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||| | |||||| |||||||||||||||||||||||||||| |
|
|
| T |
22578561 |
ctgctatgttttgttattttttagacctgaaagaccatgggttgctttgctatgtaatgtttatgccttttcttagggcttaagttagcttttaggctat |
22578462 |
T |
 |
| Q |
189 |
aaaaagagcagccaacaaacttattattcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttcttattttcttgt |
282 |
Q |
| |
|
||| |||||||||| || |||||||||||||||||| || |||| |||||| | ||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22578461 |
aaatagagcagccaccagacttattattcatcttttgtttttggaaattttatgtgacaactatttctttgaataaaagttcttattttcttgt |
22578368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 99 - 273
Target Start/End: Original strand, 15027335 - 15027511
Alignment:
| Q |
99 |
ttttgttat-ttttcagacccaaaagtccatgggttgcttgctatgtaatgtttgtacctttt-ttagggcttaagttagcttttaggctataaaaagag |
196 |
Q |
| |
|
||||||||| |||| ||||| ||||| ||||||||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
15027335 |
ttttgttatatttttagacctaaaagcccatgggttgcttgctatgtaatttttatgcctttttttagggcttaagttagcttttaggctataaatagag |
15027434 |
T |
 |
| Q |
197 |
cagccaaca-aacttattattcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttctta |
273 |
Q |
| |
|
|||||| || | ||||| ||||||||||| || ||||||||||| | ||||| |||||| || |||||||||||||| |
|
|
| T |
15027435 |
cagccaccataccttatgattcatcttttgttcttgggaattttatgtgacaactatttcatt-aataaaagttctta |
15027511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 306 - 424
Target Start/End: Complemental strand, 22577862 - 22577745
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaattttatcaatcaaaaatccaaactttttaacctttaaactttcagctaatcacctttaaaaagaga |
405 |
Q |
| |
|
|||||||| ||||||| |||||||||| ||||| |||| | || ||||||||||||||| ||| | ||| ||||||| |||||||| ||||||||||| |
|
|
| T |
22577862 |
gaaccaatgatcccgatgcgctttttactattatttttcttaaatcaaaatccaaacttttcaac-tgtaatctttcagttaatcaccattaaaaagaga |
22577764 |
T |
 |
| Q |
406 |
atcacaattacaacaactc |
424 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
22577763 |
atcaaaattacaacaactc |
22577745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 24023932 - 24023858
Alignment:
| Q |
214 |
attcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttcttattttcttgttattta |
288 |
Q |
| |
|
||||||||||| || |||| |||||| | ||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
24023932 |
attcatcttttgttcttggaaattttatgtgacaactatttctttgaataaaagttcttattttcttgttcttta |
24023858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 24018135 - 24018043
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaatttt-atcaatcaaaaatccaaactttttaacctttaaactttcagctaatcacctttaa |
398 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||| || |||||||| || |||||||| || |||||| |||||||||||||||| |||| |
|
|
| T |
24018135 |
gaaccaataatcccgaggcgttttttattatatattttcataaatcaaaa-tcaaaacttttcaaactttaatctttcagctaatcaccattaa |
24018043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 24018724 - 24018626
Alignment:
| Q |
184 |
gctataaaaagagcagccaacaaactt--attattcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttcttattttctt |
280 |
Q |
| |
|
|||||||| |||| || || ||||||| || |||||| |||| || ||||||||||| | ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
24018724 |
gctataaatagaggagtcaccaaacttgcataattcatgttttgttcttgggaattttatgtgacaactatttctttgaataaaagttcttattttctt |
24018626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 24371568 - 24371432
Alignment:
| Q |
164 |
gggcttaagttagcttttaggctataaaaagagcagccaacaaacttat-tattcatcttttattattgggaattttccgcgacaattatttctttgaat |
262 |
Q |
| |
|
||||||||||||| |||||| ||||||| |||||| | | ||||| ||| | |||||||||| || |||| | || | | ||||||| ||||||||||| |
|
|
| T |
24371568 |
gggcttaagttag-ttttagactataaatagagcatctagcaaacatatattttcatcttttgttcttggaatttataagtgacaattgtttctttgaat |
24371470 |
T |
 |
| Q |
263 |
aaaagttct---tattttcttgttatttatttttatgt |
297 |
Q |
| |
|
|||| |||| ||||||||||||| ||| |||||||| |
|
|
| T |
24371469 |
aaaatttctctctattttcttgttaattacttttatgt |
24371432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 24825033 - 24824976
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
24825033 |
gacaattgtttctttgaataaaagttcacctttactttcttgttatttacttttatgt |
24824976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 353
Target Start/End: Original strand, 29952180 - 29952225
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaattttatcaatcaaa |
353 |
Q |
| |
|
||||||||||||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
29952180 |
gaaccaataatcccgagacgctttttattatt--ttatatcaatcaaa |
29952225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 31590051 - 31590019
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattatta |
338 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |
|
|
| T |
31590051 |
gaaccaataatctcgaggcgctttttattatta |
31590019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 68 - 283
Target Start/End: Complemental strand, 32796778 - 32796562
Alignment:
| Q |
68 |
gcacgaccgtgccaagtcccagactgctatgttttgttatttttcagacccaaaagtccatgggttgcttg-ctatgtaatgtttgtacctttt-ttagg |
165 |
Q |
| |
|
||||||||||||| ||| |||| ||||||||||||||||||||| ||||| ||||| ||||| ||||||| ||||||||||||| | |||||| ||||| |
|
|
| T |
32796778 |
gcacgaccgtgcctagttccag-ctgctatgttttgttattttttagacctaaaagcccatgagttgcttttctatgtaatgtttatgccttttcttagg |
32796680 |
T |
 |
| Q |
166 |
gcttaagttagcttttaggctataaaaagagcagccaacaaacttattattcatcttttattattgggaattttccgcgacaattattt-ctttgaataa |
264 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||| || ||||||||| |||| ||| || ||||||||| || | ||||||||||| | |||||| | |
|
|
| T |
32796679 |
gcttaagttagcttttaggctataaatagagcaaccaccatacttattatgcatc-tttgttcttgggaattctctgtgacaattatttccattgaatca |
32796581 |
T |
 |
| Q |
265 |
aagttcttattttcttgtt |
283 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
32796580 |
aagttcttattttcttgtt |
32796562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 68 - 292
Target Start/End: Original strand, 13168185 - 13168414
Alignment:
| Q |
68 |
gcacgaccgtgccaagtcccagactgctatgttttgttatttttcagacccaaaagtccatgggttgcttgctatgtaat---gtttgtacctttt-tta |
163 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||| |||| | |||||| ||| |
|
|
| T |
13168185 |
gcacgaccgtgccaagttccaagctgctatgttttgtaatttt-cagacctaaaagcccatgggttgcttgctatgtaataatgtttatgccttttctta |
13168283 |
T |
 |
| Q |
164 |
gggcttaagttagcttttaggctataaaaagagcagccaacaaac--ttattattcatcttttattattgggaattttccgcgacaattattt-ctttga |
260 |
Q |
| |
|
|| ||||||||||||||||||||||||| |||||||||| || || |||| ||||||||||| || ||||||||| || || |||||||| | |||| |
|
|
| T |
13168284 |
ggtcttaagttagcttttaggctataaatagagcagccaccagacctttatgattcatcttttgttcttgggaattctctatgataattatttccattga |
13168383 |
T |
 |
| Q |
261 |
ataaaagttcttattttcttgttatttatttt |
292 |
Q |
| |
|
|| |||||||| ||||||||||| |||||||| |
|
|
| T |
13168384 |
atcaaagttctgattttcttgtt-tttatttt |
13168414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 306 - 424
Target Start/End: Complemental strand, 32796042 - 32795923
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaatttt--atcaatcaaaaatccaaactttttaacctttaaactttcagctaatcacctttaaaaaga |
403 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||| |||| || ||||||||||| || |||||| |||||||||||||||| ||||||||| |
|
|
| T |
32796042 |
gaaccaataatcccgagacgctttttattattaattttgtatcgatcataa-tccaaacttttcaaactttaatctttcagctaatcaccattaaaaaga |
32795944 |
T |
 |
| Q |
404 |
gaatcacaattacaacaactc |
424 |
Q |
| |
|
|||||| |||||||||||||| |
|
|
| T |
32795943 |
gaatcataattacaacaactc |
32795923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 425
Target Start/End: Original strand, 13168921 - 13169041
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaatttt-atcaatcaaaaatccaaactttttaacctttaaactttcagctaatcacctttaaaaagag |
404 |
Q |
| |
|
||||||||||||| || || |||||||| |||||||| |||||||||||||| || ||||| ||||||||||||||||| |||||| |||||||||| |
|
|
| T |
13168921 |
gaaccaataatcctgatgcactttttatcattaatttacatcaatcaaaaatcaaaccttttaaacctttaaactttcagttaatcatggttaaaaagag |
13169020 |
T |
 |
| Q |
405 |
aatcacaattacaacaactct |
425 |
Q |
| |
|
||||| ||||||||||||||| |
|
|
| T |
13169021 |
aatcaaaattacaacaactct |
13169041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 17522454 - 17522388
Alignment:
| Q |
222 |
tttattattgggaattttccgcgacaattatttctttgaataaaagttcttattttcttgttattta |
288 |
Q |
| |
|
|||||| |||||||||||| | ||||| ||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
17522454 |
tttattcttgggaattttcagtgacaactatttctttgaatcaaagttcttattttcttgttcttta |
17522388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 9414324 - 9414432
Alignment:
| Q |
184 |
gctataaaaagagcagccaacaaactt--attattcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttcttatttt-ctt |
280 |
Q |
| |
|
|||||||| |||| | ||| ||||||| || ||||||||||| || ||||||||| | | |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
9414324 |
gctataaatagaggaaccatcaaacttgtataattcatcttttgttcttgggaattcttagtgacaattatttctttgaataaaagttcttattttactt |
9414423 |
T |
 |
| Q |
281 |
gttatttat |
289 |
Q |
| |
|
||| ||||| |
|
|
| T |
9414424 |
gttctttat |
9414432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 29682551 - 29682688
Alignment:
| Q |
164 |
gggcttaagttagcttttaggctataaaaagagcagccaacaaacttat-tattcatcttttattattgggaattttccgcgacaattatttctttgaat |
262 |
Q |
| |
|
||||||||||||| |||||| ||||||| |||| ||| | || || ||| | ||||||||||||| |||| |||| | | |||||||||||||||| || |
|
|
| T |
29682551 |
gggcttaagttagtttttag-ctataaatagagaagctagcagacatatattttcatcttttattcttggaaattctaagtgacaattatttctttggat |
29682649 |
T |
 |
| Q |
263 |
aaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
|||||||| ||||||||||| |||||| |||||||| |
|
|
| T |
29682650 |
aaaagttcttctttattttcttgctatttacttttatgt |
29682688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 20222863 - 20223000
Alignment:
| Q |
164 |
gggcttaagttagcttttaggctataaaaagagcagccaacaaacttattat-tcatcttttattattgggaattttccgcgacaattatttctttgaat |
262 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||| | | |||| ||| | ||||||||| || |||| ||| | | ||||||| ||||||||||| |
|
|
| T |
20222863 |
gggcttaagttag-ttttaggctataaatagagcaactagaaaacatatattctcatcttttgttcttggaaataataagtgacaattgtttctttgaat |
20222961 |
T |
 |
| Q |
263 |
aaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||| |
|
|
| T |
20222962 |
aaaagttcatctttattttcttgttatttacttttatgt |
20223000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 21238017 - 21237972
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttcttattttcttgttatttat |
289 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
21238017 |
gacaattgtttctttgaatcaaagttcttattttcttgttctttat |
21237972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 22116847 - 22116984
Alignment:
| Q |
164 |
gggcttaagttagcttttaggctataaaaagagcagccaacaaacttattat-tcatcttttattattgggaattttccgcgacaattatttctttgaat |
262 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||| | | |||| ||| | ||||||||| || |||| ||| | | ||||||| ||||||||||| |
|
|
| T |
22116847 |
gggcttaagttag-ttttaggctataaatagagcaactagaaaacatatattctcatcttttgttcttggaaataataagtgacaattgtttctttgaat |
22116945 |
T |
 |
| Q |
263 |
aaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||| |
|
|
| T |
22116946 |
aaaagttcatctttattttcttgttatttacttttatgt |
22116984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 31965678 - 31965575
Alignment:
| Q |
164 |
gggcttaagttagcttttaggctataaaaagagcagccaacaaacttattat-tcatcttttattattgggaattttccgcgacaattatttctttgaat |
262 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||| | ||||| ||| | ||||||||| || |||| |||| | | ||||||| ||||||||||| |
|
|
| T |
31965678 |
gggcttaagttag-ttttaggctataaatagagcagctagcaaacatatattgtcatcttttgttcttggaaattataagtgacaattgtttctttgaat |
31965580 |
T |
 |
| Q |
263 |
aaaag |
267 |
Q |
| |
|
||||| |
|
|
| T |
31965579 |
aaaag |
31965575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 26822468 - 26822506
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaatttta |
344 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
26822468 |
gaaccaataatcccaaggcgctttttattattactttta |
26822506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 210189 - 210132
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
210189 |
gacaattgtttctttgaataaaagttcacctttactttcttgttatttacttttatgt |
210132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 18448812 - 18448869
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
18448812 |
gacaattgtttctttgaataaaagttcacctttactttcttgttatttacttttatgt |
18448869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 24218757 - 24218814
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
24218757 |
gacaattgtttctttgaataaaagttcacctttactttcttgttatttacttttatgt |
24218814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 93; Significance: 4e-45; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 68 - 282
Target Start/End: Original strand, 24679974 - 24680189
Alignment:
| Q |
68 |
gcacgaccgtgccaagtcccagactgctatgttttgttatttttcagacccaaaagtccatgggttgctt-gctatgtaatgtttgtacctttt-ttagg |
165 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||| ||| ||||||| |||||||||||||| | |||||| ||||| |
|
|
| T |
24679974 |
gcacgaccgtgccaagcttcag-ctgctatgttttgttattttttagacctaaaagtgaatgagttgctttgctatgtaatgtttatgccttttcttagg |
24680072 |
T |
 |
| Q |
166 |
gcttaagttagcttttaggctataaaaagagcagccaacaaacttattattcatcttttattattgggaattttccgcgacaattatttctttgaataaa |
265 |
Q |
| |
|
||| |||||||||||||||||||||| || ||||||| || |||||| | ||||||||| || ||||| ||||| | ||||| |||||||||||| ||| |
|
|
| T |
24680073 |
gctcaagttagcttttaggctataaatagggcagccaccagacttatgaatcatcttttgttcttggggattttatgtgacaactatttctttgaacaaa |
24680172 |
T |
 |
| Q |
266 |
agttcttattttcttgt |
282 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
24680173 |
agttcttattttcttgt |
24680189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 424
Target Start/End: Original strand, 24680751 - 24680796
Alignment:
| Q |
379 |
tttcagctaatcacctttaaaaagagaatcacaattacaacaactc |
424 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
24680751 |
tttcagctaatcaccattaaaaagagaatcataattacaacaactc |
24680796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 21918802 - 21918868
Alignment:
| Q |
108 |
ttttcagacccaaaagtccatgggttgcttgctatgtaatgtttgtacctttt-ttagggcttaagt |
173 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||| ||| | | |||| ||||||||||||| |
|
|
| T |
21918802 |
ttttcagacctaaaagcccatgggttgcttgctatgtaatttttattcattttcttagggcttaagt |
21918868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 1869952 - 1869886
Alignment:
| Q |
324 |
cgctttttattattaatttta-tcaatcaaaaatccaaactttttaacctttaaactttcagctaatc |
390 |
Q |
| |
|
||||||||||||||| ||| | |||| |||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
1869952 |
cgctttttattattattttcaatcaaataaaaatcccaactttt-aacctttaaactttcagctaatc |
1869886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 2129902 - 2129985
Alignment:
| Q |
212 |
ttattcatcttttattattgggaattttccgcgacaattatttct-ttgaataaaagttctt--attttcttgttatttatttt |
292 |
Q |
| |
|
|||||||||||| | | ||||||||| | | ||||||||||||| |||||| ||||||||| ||||||||||| |||||||| |
|
|
| T |
2129902 |
ttattcatctttgaatcttgggaattctttgtgacaattatttctattgaatcaaagttcttttattttcttgttctttatttt |
2129985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 21784272 - 21784215
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
21784272 |
gacaattgtttctttgaataaaagttcacctttactttcttgttatttacttttatgt |
21784215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 61; Significance: 5e-26; HSPs: 3)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 31317 - 31206
Alignment:
| Q |
107 |
tttttcagacccaaaagtccatgggttgcttgctatgtaatgtttgtacctttt-ttagggcttaagttagcttttaggctataaaaagagcagccaaca |
205 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
31317 |
tttttcagacctaaaatcccatgggttgcttgctatgtaattttt-tgccttttcttagggcttaagttagcttttaggctataaatagagcagccacca |
31219 |
T |
 |
| Q |
206 |
aacttattattca |
218 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
31218 |
gacatattattca |
31206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 32097 - 31940
Alignment:
| Q |
99 |
ttttgtta-tttttcagacccaaaagtccatgggttgcttgctatgtaatgtttgtacctttt-ttagggcttaagttagcttttaggctataaaaagag |
196 |
Q |
| |
|
|||||||| ||||||||||| ||||| ||| ||||||||||||||||||| ||| | |||||| ||| ||||||||||||||| ||||||||||| |||| |
|
|
| T |
32097 |
ttttgttactttttcagacctaaaagcccacgggttgcttgctatgtaat-tttatgccttttcttaaggcttaagttagcttataggctataaatagag |
31999 |
T |
 |
| Q |
197 |
cagccaacaaacttattattcatcttttattattgggaattttccgcgacaattatttct |
256 |
Q |
| |
|
|||||| || || ||||||||||| ||| || || ||||||||| | ||||| ||||||| |
|
|
| T |
31998 |
cagccaccagacatattattcatc-tttgttcttaggaattttcagtgacaactatttct |
31940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 33465 - 33374
Alignment:
| Q |
107 |
tttttcagacccaaaagtccatgggttgcttgctatgtaatgtttgtacctttt-ttagggcttaagttagcttttaggctataaaaagagca |
198 |
Q |
| |
|
||||||| ||| |||| || |||||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
33465 |
tttttcaaacctaaaatcccttgggttgcttgctatgtaat-tttatgccttttcttagggcttaagttagcttttaggctataaatagagca |
33374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 290
Target Start/End: Original strand, 12347219 - 12347444
Alignment:
| Q |
68 |
gcacgaccgtgccaag-tcccagactgctatgttttgttat-ttttcagacccaaaagtccatgggttgcttgctatgtaatgtttgtacctttt-ttag |
164 |
Q |
| |
|
|||||||||||||||| | |||| || |||| |||||||| |||||| | | ||||| |||||||||| |||||||||||| ||| | |||||| |||| |
|
|
| T |
12347219 |
gcacgaccgtgccaaggttccaggcttctat--tttgttatgttttcataactaaaagcccatgggttgtttgctatgtaatttttatgccttttcttag |
12347316 |
T |
 |
| Q |
165 |
ggcttaagttagcttttaggctataaaaagagcagccaaca-aacttattattcatcttttattattgggaattttccgcgacaattatttctttgaata |
263 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||| || | ||| |||||||||| | || ||| ||||||| | ||||| |||||| | |||| |
|
|
| T |
12347317 |
ggcttaagttagcttttaggatataaatagagcagccaccagacctttatattcatcttgtgttcttgtgaattttatgtgacaactatttccattaata |
12347416 |
T |
 |
| Q |
264 |
aaagttctta-ttttcttgttatttatt |
290 |
Q |
| |
|
|||||||||| |||||||| | |||||| |
|
|
| T |
12347417 |
aaagttcttacttttcttgctttttatt |
12347444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 99 - 290
Target Start/End: Complemental strand, 13883678 - 13883484
Alignment:
| Q |
99 |
ttttgttat-ttttcagacccaaaagtccatgggttgcttgctatgtaatgtttgtacctttttta-gggcttaagttagcttttaggctataaaaagag |
196 |
Q |
| |
|
||||||||| ||||| ||| ||||| |||||||||||||||||| |||| ||| | |||||| || |||||||||||||||||||||||||||| ||| |
|
|
| T |
13883678 |
ttttgttatgttttcctacctaaaagcccatgggttgcttgctatataat-tttatgccttttctaagggcttaagttagcttttaggctataaatcgag |
13883580 |
T |
 |
| Q |
197 |
cagccaaca-aacttattattcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttctta-ttttcttgttatttatt |
290 |
Q |
| |
|
||||| || | ||| | |||||| |||| || ||||||||||| | ||||| |||||| | |||||||||||||| |||||||| | |||||| |
|
|
| T |
13883579 |
tagccaccagaccttgtgattcatattttgttcttgggaattttatgtgacaactatttccattaataaaagttcttacttttcttgctttttatt |
13883484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 424
Target Start/End: Complemental strand, 13883005 - 13882886
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaatttta-tcaatcaaaaatccaaactttttaacctttaaactttcagctaatcacctttaaaaagag |
404 |
Q |
| |
|
||||||| |||||| |||| ||||||||||||| ||| | |||||||||||||| ||||||| || | ||| ||||||||||| |||| ||||||| |
|
|
| T |
13883005 |
gaaccaacaatcccaaggcactttttattattattttcaatcaatcaaaaatcccaacttttaaaaccctaatctttcagctaaacaccactaaaaagca |
13882906 |
T |
 |
| Q |
405 |
aatcacaattacaacaactc |
424 |
Q |
| |
|
||||| ||| |||||||||| |
|
|
| T |
13882905 |
aatcaaaatcacaacaactc |
13882886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 12506704 - 12506640
Alignment:
| Q |
72 |
gaccgtgccaagtcccagactgctatgttttgttatttttcagacccaaaagtccatgggttgctt |
137 |
Q |
| |
|
||||||||||||| ||| |||||||||||| |||||||||||||| ||||| ||||||||||||| |
|
|
| T |
12506704 |
gaccgtgccaagttcca-actgctatgtttggttatttttcagacgtaaaagcccatgggttgctt |
12506640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 17168881 - 17168938
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttct----tattttcttgttatttatttttatgt |
297 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
17168881 |
gacaattatttctttgaataaaagttcttctctattttcttgttatttacttttatgt |
17168938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 17174453 - 17174510
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttct----tattttcttgttatttatttttatgt |
297 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
17174453 |
gacaattatttctttgaataaaagttcttctctattttcttgttatttacttttatgt |
17174510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 21102280 - 21102223
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
21102280 |
gacaattatttctttgaataaaagttcacctttactttcttgttatttacttttatgt |
21102223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 23793725 - 23793620
Alignment:
| Q |
164 |
gggcttaagttagcttttaggctataaaaagagcagccaacaaacttat-tattcatcttttattattgggaattttccgcgacaattatttctttgaat |
262 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||| ||||||| ||| | ||||||||| || |||| |||| | | | ||||| ||||||||||| |
|
|
| T |
23793725 |
gggcttaagttag-ttttaggctataaatagagcagctaacaaacatatattctcatcttttgttcttggaaattataagtg-caattgtttctttgaat |
23793628 |
T |
 |
| Q |
263 |
aaaagttc |
270 |
Q |
| |
|
|||||||| |
|
|
| T |
23793627 |
aaaagttc |
23793620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 11048934 - 11048975
Alignment:
| Q |
351 |
aaaaatccaaactttttaaccttt-aaactttcagctaatca |
391 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
11048934 |
aaaaatccaaactttttaacctttgaaactttcatctaatca |
11048975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 55267549 - 55267629
Alignment:
| Q |
212 |
ttattcatcttttattattgggaattttccgcgacaattatttc-tttgaataaaagttc--ttattttcttgttatttat |
289 |
Q |
| |
|
|||||||||||| | | ||||||||| || ||||||||||||| ||||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
55267549 |
ttattcatctttgaatcttgggaattctctacgacaattatttcttttgaatcaaagttcttttattttcttgttctttat |
55267629 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 6518407 - 6518464
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
6518407 |
gacaattgtttctttgaataaaagttcacctttactttcttgttatttacttttatgt |
6518464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 277
Target Start/End: Complemental strand, 27992907 - 27992738
Alignment:
| Q |
108 |
ttttcagacccaaaagtccatgggttgcttgctatgtaatgtttgtacctttt-ttagggcttaagttagcttttaggctataaaaagagcagccaacaa |
206 |
Q |
| |
|
|||||| ||| ||||| |||||||||||||||| |||||| || | | |||| |||||||||||| ||||||| |||||||||| |||| ||||| || |
|
|
| T |
27992907 |
ttttcaaacctaaaag-ccatgggttgcttgctttgtaattcttattcattttcttagggcttaagctagcttt-aggctataaatagagtagccaccag |
27992810 |
T |
 |
| Q |
207 |
acttat-tattcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttcttatttt |
277 |
Q |
| |
|
|| ||| | |||||||||| || ||||||||||| | |||||||||||| | |||||||||||||||||| |
|
|
| T |
27992809 |
acatatctcttcatcttttgttcttgggaattttatgtgacaattatttccatcaataaaagttcttatttt |
27992738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 14826646 - 14826713
Alignment:
| Q |
216 |
tcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttcttattttcttgtt |
283 |
Q |
| |
|
|||| ||||||| |||||||||||| | ||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
14826646 |
tcatattttattcttgggaattttcagtgacaactatttctttgaataagagttcttattttcttgtt |
14826713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 17023274 - 17023326
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttc----ttattttcttgttatttatttt |
292 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
17023274 |
gacaattgtttctttgaataaaagttcatctttattttcttgttatttatttt |
17023326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0855 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0855
Description:
Target: scaffold0855; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 297
Target Start/End: Original strand, 3423 - 3562
Alignment:
| Q |
161 |
ttagggcttaagttagcttttaggctataaaaagagcagccaacaaacttat-tattcatcttttattattgggaattttccgcgacaattatttctttg |
259 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||||| | ||||| ||| | |||||||||| || |||| |||| | | ||||||| |||||| | |
|
|
| T |
3423 |
ttagggcttaagttag-ttttaggctataaatagagcagctagcaaacatatattttcatcttttgttcttggaaattataagtgacaattgtttcttag |
3521 |
T |
 |
| Q |
260 |
aataaaagttc---ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||||||| ||||||| |||||||||| |||||||| |
|
|
| T |
3522 |
aataaaagttctctttattttattgttatttacttttatgt |
3562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0855; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 4079 - 4149
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaattttatcaatc---aaaaatccaaactttttaacctt |
373 |
Q |
| |
|
|||||||||||||| | |||||||||||||||| | || |||||| |||||||| ||||||| |||||| |
|
|
| T |
4079 |
gaaccaataatcccaatgcgctttttattattattattttcaatcgataaaaatcccaacttttcaacctt |
4149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0847 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0847
Description:
Target: scaffold0847; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 297
Target Start/End: Original strand, 3588 - 3727
Alignment:
| Q |
161 |
ttagggcttaagttagcttttaggctataaaaagagcagccaacaaacttat-tattcatcttttattattgggaattttccgcgacaattatttctttg |
259 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||||| | ||||| ||| | |||||||||| || |||| |||| | | ||||||| |||||| | |
|
|
| T |
3588 |
ttagggcttaagttag-ttttaggctataaatagagcagctagcaaacatatattttcatcttttgttcttggaaattataagtgacaattgtttcttag |
3686 |
T |
 |
| Q |
260 |
aataaaagttc---ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||||||| ||||||| |||||||||| |||||||| |
|
|
| T |
3687 |
aataaaagttctctttattttattgttatttacttttatgt |
3727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0847; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 4244 - 4314
Alignment:
| Q |
306 |
gaaccaataatcccgaggcgctttttattattaattttatcaatc---aaaaatccaaactttttaacctt |
373 |
Q |
| |
|
|||||||||||||| | |||||||||||||||| | || |||||| |||||||| ||||||| |||||| |
|
|
| T |
4244 |
gaaccaataatcccaatgcgctttttattattattattttcaatcgataaaaatcccaacttttcaacctt |
4314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 7465580 - 7465511
Alignment:
| Q |
133 |
tgcttgctatgtaatgtttgtacctttt-ttagggcttaagttagcttttaggctataaaaagagcagcca |
202 |
Q |
| |
|
|||||||||||||| |||| | |||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
7465580 |
tgcttgctatgtaa-gtttttgccttttcttagggcttaagttagcttttaggctataaatagagcagcca |
7465511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 31469887 - 31469781
Alignment:
| Q |
86 |
ccagactgctatgttttgttat-ttttcagacccaaaagtccatgggttgcttgctatgtaatgtttgta---ccttttttagggcttaagttagctttt |
181 |
Q |
| |
|
|||||||||||| |||||||| |||||||||| ||||| || |||||||||| ||||||||| |||||| | ||| |||||| |||||||||||||| |
|
|
| T |
31469887 |
ccagactgctat--tttgttatgttttcagacctaaaagcccttgggttgcttactatgtaat-tttgtatgtcttttcttagggattaagttagctttt |
31469791 |
T |
 |
| Q |
182 |
aggctataaa |
191 |
Q |
| |
|
|||||||||| |
|
|
| T |
31469790 |
aggctataaa |
31469781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 297
Target Start/End: Complemental strand, 24221683 - 24221543
Alignment:
| Q |
161 |
ttagggcttaagttagcttttaggctataaaaagagcagccaacaaacttatt-attcatcttttattattgggaattttccgcgacaattatttctttg |
259 |
Q |
| |
|
|||||||||||||||| |||||| ||||||| |||||| | | ||||| ||| | |||| |||| || |||| |||| | | |||||||||||||||| |
|
|
| T |
24221683 |
ttagggcttaagttag-ttttagactataaatagagcaactagcaaacatatacaatcattttttgttcttggaaattctaagtgacaattatttctttg |
24221585 |
T |
 |
| Q |
260 |
aataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||| |||| |
|
|
| T |
24221584 |
aataaaagttcatatttattttcttgttatttactttcatgt |
24221543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 15634309 - 15634355
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttctta-ttttcttgttatttat |
289 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||| ||||| |
|
|
| T |
15634309 |
gacaattatttctttgaatcaaagttcttatttttcttgttctttat |
15634355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 15636082 - 15636128
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttctta-ttttcttgttatttat |
289 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||| ||||| |
|
|
| T |
15636082 |
gacaattatttctttgaatcaaagttcttatttttcttgttctttat |
15636128 |
T |
 |
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Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 13773 - 13837
Alignment:
| Q |
72 |
gaccgtgccaagtcccagactgctatgttttgttatttttcagacccaaaagtccatgggttgctt |
137 |
Q |
| |
|
||||||||||||| ||| |||||||||||| |||||||||||||| ||||| ||||||||||||| |
|
|
| T |
13773 |
gaccgtgccaagttcca-actgctatgtttggttatttttcagacgtaaaagcccatgggttgctt |
13837 |
T |
 |
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Target: scaffold0088 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0088
Description:
Target: scaffold0088; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 286
Target Start/End: Original strand, 38481 - 38578
Alignment:
| Q |
193 |
agagcagccaacaaacttat-tattcatcttttattattgggaattttccgcgacaattatttctttgaataaaagttc---ttattttcttgttatt |
286 |
Q |
| |
|
|||||||||| || |||||| |||||||||||| || |||| |||| | | ||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
38481 |
agagcagccatcagacttatctattcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttctctttattttcttgttatt |
38578 |
T |
 |
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Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 23029708 - 23029571
Alignment:
| Q |
164 |
gggcttaagttagcttttaggctataaaaagagcagccaacaaacttat-tattcatcttttattattgggaattttccgcgacaattatttctttgaat |
262 |
Q |
| |
|
||||||| ||||| |||||||||||||| |||||||| | || || ||| |||||||||||| || |||| |||| | | || ||| ||||||||||| |
|
|
| T |
23029708 |
gggcttatgttag-ttttaggctataaatagagcagctagcagacatatctattcatcttttgttcttggaaattataagtgaagattgtttctttgaat |
23029610 |
T |
 |
| Q |
263 |
aaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
|||||||| |||||||||||||||||| || ||||| |
|
|
| T |
23029609 |
aaaagttcttctttattttcttgttatttacttctatgt |
23029571 |
T |
 |
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Target: scaffold0094 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0094
Description:
Target: scaffold0094; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 1630 - 1698
Alignment:
| Q |
221 |
ttttattattgggaattttccgcgacaattatttct-ttgaataaaagttcttattttcttgttattta |
288 |
Q |
| |
|
||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||| ||||||| |
|
|
| T |
1630 |
ttttattattgggaattctctatgacaattatttccattgaataaaatttcttattttcttcttattta |
1698 |
T |
 |
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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 168155 - 168289
Alignment:
| Q |
164 |
gggcttaagttagcttttaggctataaaaagagcagccaacaaacttat-tattcatcttttattattgggaattttccgcgacaattatttctttgaat |
262 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||| | || || ||| || ||||||||| || |||| |||| | | ||||||||||||||| ||| |
|
|
| T |
168155 |
gggcttaagttag-ttttaggctataaaa-gagcagctagcagacatatctaatcatcttttgttcttggaaattctaagtgacaattatttctttaaat |
168252 |
T |
 |
| Q |
263 |
aaa-agttc-ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||| ||| |||||||||||||||||| |||||||| |
|
|
| T |
168253 |
aaattcttctttattttcttgttatttacttttatgt |
168289 |
T |
 |
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Target: scaffold1323 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1323
Description:
Target: scaffold1323; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 1955 - 1898
Alignment:
| Q |
244 |
gacaattatttctttgaataaaagttc----ttattttcttgttatttatttttatgt |
297 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
1955 |
gacaattgtttctttgaataaaagttcacctttactttcttgttatttacttttatgt |
1898 |
T |
 |
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