View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9675_high_13 (Length: 268)
Name: NF9675_high_13
Description: NF9675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9675_high_13 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 15 - 268
Target Start/End: Original strand, 15419978 - 15420231
Alignment:
| Q |
15 |
aacctgtgttcaaagataagttaattattataagtaatacataattttgttatgaaaaccatgtactaatctttgaatcaatgtttgaacttatgtggtc |
114 |
Q |
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| T |
15419978 |
aacctgtgttcaaagataagttaattattataagtaatacataattttgttatgaaaaccatgtattaatctttgaatcaatgtttgaacttatgtggtc |
15420077 |
T |
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| Q |
115 |
gccaacaaatgtagcagctaaaatgttacaagtagtgcataccaacaattcaaaacttcaaatgtttatagtaaaatgactataacatcatgtttaatta |
214 |
Q |
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| T |
15420078 |
gccaacaaatgtagcagctaaaatgttacaagtagtgcataccaacaattcaaaacttcaaatgtttatagtaaaatgactataacatcatgtttaatta |
15420177 |
T |
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| Q |
215 |
agatcattatgaaatctcacaaatgactatcagagaccgtcgtaagatgactat |
268 |
Q |
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| T |
15420178 |
agatcattatgaaatctcacaaatgactatcagagaccgtcgtaagatgactat |
15420231 |
T |
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