View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9675_low_37 (Length: 253)
Name: NF9675_low_37
Description: NF9675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9675_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 13190122 - 13190230
Alignment:
| Q |
12 |
agagacaggatacaaagatagaatgatcactcaccaaataccacctgaatgaatgaataagagtacaatagttgacactttagccggcacaataaaaaga |
111 |
Q |
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| T |
13190122 |
agagacaggatacaaagatagaatgatcactcaccaaataccacctgaatgaatgaataagagtacaatagttgacactttagccggcataataaaaaga |
13190221 |
T |
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| Q |
112 |
taaatgata |
120 |
Q |
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||||||||| |
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| T |
13190222 |
taaatgata |
13190230 |
T |
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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 13182085 - 13182146
Alignment:
| Q |
12 |
agagacaggatacaaagatagaatgatcactcaccaaataccacctgaatgaatgaataaga |
73 |
Q |
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|||||||| ||||||||| ||||||| ||||||||| || | ||||||| |||||||||||| |
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| T |
13182085 |
agagacagcatacaaagaaagaatgaccactcaccagatgcgacctgaacgaatgaataaga |
13182146 |
T |
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