View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9679_high_3 (Length: 456)

Name: NF9679_high_3
Description: NF9679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9679_high_3
NF9679_high_3
[»] scaffold0246 (1 HSPs)
scaffold0246 (74-379)||(12040-12331)
[»] chr2 (30 HSPs)
chr2 (199-379)||(28001383-28001563)
chr2 (1-62)||(3873615-3873676)
chr2 (1-62)||(518481-518542)
chr2 (1-62)||(1666963-1667024)
chr2 (1-62)||(4898332-4898393)
chr2 (1-62)||(4945726-4945787)
chr2 (1-43)||(41186817-41186859)
chr2 (1-62)||(2443484-2443545)
chr2 (1-62)||(5443866-5443927)
chr2 (1-62)||(14309109-14309169)
chr2 (1-62)||(40425165-40425226)
chr2 (6-62)||(23494458-23494514)
chr2 (6-62)||(29026985-29027041)
chr2 (6-46)||(42784301-42784341)
chr2 (6-45)||(40483605-40483644)
chr2 (1-43)||(5421468-5421510)
chr2 (1-43)||(19576081-19576123)
chr2 (1-43)||(28206612-28206654)
chr2 (1-43)||(30780091-30780133)
chr2 (1-43)||(36443548-36443590)
chr2 (1-55)||(41787090-41787144)
chr2 (1-62)||(2048202-2048263)
chr2 (1-62)||(11216609-11216669)
chr2 (1-58)||(21134611-21134668)
chr2 (1-62)||(22154217-22154277)
chr2 (1-62)||(27863005-27863065)
chr2 (1-62)||(38959752-38959812)
chr2 (6-62)||(6713902-6713958)
chr2 (1-41)||(14885055-14885095)
chr2 (8-60)||(27862711-27862762)
[»] scaffold0007 (2 HSPs)
scaffold0007 (199-376)||(267287-267464)
scaffold0007 (6-62)||(2941-2996)
[»] chr4 (38 HSPs)
chr4 (74-200)||(51254701-51254826)
chr4 (1-62)||(53334061-53334122)
chr4 (1-62)||(29832270-29832331)
chr4 (1-62)||(32402695-32402756)
chr4 (1-62)||(36878645-36878706)
chr4 (1-43)||(13397990-13398032)
chr4 (1-62)||(23237015-23237077)
chr4 (1-62)||(19877770-19877830)
chr4 (1-62)||(34735936-34735996)
chr4 (1-62)||(37912463-37912524)
chr4 (1-62)||(49228105-49228165)
chr4 (1-62)||(50533785-50533846)
chr4 (6-62)||(1788803-1788858)
chr4 (6-62)||(38615266-38615321)
chr4 (1-43)||(4294133-4294175)
chr4 (1-43)||(13252361-13252403)
chr4 (1-43)||(13880486-13880528)
chr4 (1-43)||(20180402-20180444)
chr4 (1-43)||(23621673-23621715)
chr4 (1-43)||(28002549-28002591)
chr4 (1-43)||(33244973-33245015)
chr4 (1-43)||(36871453-36871495)
chr4 (1-43)||(41458897-41458939)
chr4 (1-43)||(46390742-46390784)
chr4 (1-43)||(47869245-47869287)
chr4 (1-62)||(10125685-10125745)
chr4 (1-62)||(19807031-19807092)
chr4 (1-62)||(22320545-22320606)
chr4 (1-62)||(22842922-22842982)
chr4 (1-62)||(37175374-37175434)
chr4 (9-62)||(37730966-37731019)
chr4 (1-62)||(38852841-38852902)
chr4 (1-58)||(44197268-44197325)
chr4 (9-62)||(48510848-48510900)
chr4 (1-62)||(51487751-51487812)
chr4 (1-62)||(56235166-56235226)
chr4 (6-43)||(56299720-56299757)
chr4 (6-62)||(26799360-26799416)
[»] chr3 (33 HSPs)
chr3 (199-379)||(29134916-29135090)
chr3 (1-58)||(1672902-1672959)
chr3 (1-62)||(43600884-43600945)
chr3 (1-62)||(51571768-51571829)
chr3 (1-43)||(30190358-30190400)
chr3 (1-43)||(32078054-32078096)
chr3 (1-43)||(41751136-41751178)
chr3 (1-43)||(45347204-45347246)
chr3 (1-62)||(4822884-4822945)
chr3 (1-62)||(5925317-5925376)
chr3 (1-62)||(33610295-33610356)
chr3 (1-62)||(37331393-37331454)
chr3 (1-62)||(39259275-39259335)
chr3 (1-62)||(40710717-40710777)
chr3 (1-43)||(2510230-2510272)
chr3 (1-43)||(15999023-15999065)
chr3 (1-43)||(34663465-34663507)
chr3 (1-43)||(38783646-38783688)
chr3 (1-43)||(43109627-43109669)
chr3 (1-43)||(43599605-43599647)
chr3 (1-43)||(45824090-45824132)
chr3 (1-43)||(54747912-54747954)
chr3 (1-62)||(335896-335956)
chr3 (1-62)||(18019654-18019714)
chr3 (1-62)||(21272645-21272705)
chr3 (1-62)||(23609438-23609498)
chr3 (1-62)||(37056632-37056693)
chr3 (1-62)||(43185361-43185421)
chr3 (1-42)||(49818314-49818355)
chr3 (1-42)||(50622706-50622747)
chr3 (1-62)||(52870642-52870702)
chr3 (6-62)||(23307793-23307848)
chr3 (6-62)||(51380234-51380289)
[»] chr8 (39 HSPs)
chr8 (1-62)||(31602918-31602979)
chr8 (6-62)||(44263316-44263372)
chr8 (1-62)||(5449506-5449567)
chr8 (1-62)||(39628858-39628919)
chr8 (1-62)||(39638408-39638469)
chr8 (1-62)||(3598846-3598907)
chr8 (1-62)||(26394024-26394085)
chr8 (1-62)||(29342723-29342783)
chr8 (1-62)||(34356531-34356591)
chr8 (7-62)||(2120470-2120525)
chr8 (1-62)||(15225857-15225916)
chr8 (1-43)||(31873624-31873666)
chr8 (9-62)||(899575-899627)
chr8 (1-62)||(4395469-4395529)
chr8 (1-62)||(12988186-12988247)
chr8 (1-62)||(44052888-44052949)
chr8 (1-43)||(2099168-2099210)
chr8 (1-43)||(9268007-9268049)
chr8 (1-43)||(13429103-13429145)
chr8 (1-43)||(14810082-14810124)
chr8 (1-43)||(24422514-24422556)
chr8 (1-43)||(24612878-24612920)
chr8 (1-43)||(29938325-29938367)
chr8 (1-43)||(31231079-31231121)
chr8 (1-62)||(31692751-31692810)
chr8 (1-62)||(43564603-43564662)
chr8 (1-62)||(9724600-9724661)
chr8 (6-43)||(14433358-14433395)
chr8 (1-46)||(15286564-15286609)
chr8 (1-46)||(15466933-15466978)
chr8 (1-62)||(17833925-17833986)
chr8 (1-62)||(21545271-21545332)
chr8 (1-62)||(26805029-26805089)
chr8 (1-62)||(28848973-28849033)
chr8 (6-43)||(29949132-29949169)
chr8 (21-62)||(32642622-32642663)
chr8 (6-62)||(1366763-1366818)
chr8 (6-62)||(10709309-10709365)
chr8 (1-45)||(45439545-45439589)
[»] chr7 (34 HSPs)
chr7 (1-62)||(30264443-30264504)
chr7 (1-62)||(2849975-2850036)
chr7 (1-62)||(22326730-22326791)
chr7 (1-62)||(31502825-31502885)
chr7 (1-43)||(13439352-13439394)
chr7 (1-62)||(10316565-10316626)
chr7 (1-62)||(18975955-18976016)
chr7 (1-62)||(21849853-21849914)
chr7 (1-62)||(22369520-22369581)
chr7 (1-58)||(28586956-28587012)
chr7 (1-62)||(29410290-29410350)
chr7 (1-58)||(41877720-41877777)
chr7 (1-62)||(43073935-43073996)
chr7 (1-62)||(44452204-44452265)
chr7 (6-62)||(40020318-40020374)
chr7 (1-44)||(47578884-47578927)
chr7 (1-43)||(6882875-6882917)
chr7 (1-43)||(8611848-8611890)
chr7 (1-43)||(10453112-10453154)
chr7 (1-43)||(11910636-11910678)
chr7 (1-43)||(23059105-23059147)
chr7 (1-62)||(32466362-32466421)
chr7 (1-43)||(35144291-35144333)
chr7 (1-43)||(47834356-47834398)
chr7 (6-43)||(4513569-4513606)
chr7 (1-62)||(28703560-28703620)
chr7 (6-43)||(29409361-29409398)
chr7 (1-62)||(30803301-30803361)
chr7 (1-62)||(31466065-31466125)
chr7 (6-62)||(48339464-48339518)
chr7 (6-62)||(27059748-27059803)
chr7 (6-62)||(32467824-32467879)
chr7 (1-37)||(41820903-41820939)
chr7 (6-62)||(41887780-41887835)
[»] chr1 (39 HSPs)
chr1 (1-62)||(52001213-52001274)
chr1 (1-62)||(16051852-16051913)
chr1 (1-62)||(30469531-30469592)
chr1 (6-58)||(13896573-13896625)
chr1 (6-62)||(17180688-17180744)
chr1 (7-62)||(52666828-52666883)
chr1 (1-55)||(21362469-21362523)
chr1 (1-47)||(24322723-24322769)
chr1 (1-62)||(7572509-7572570)
chr1 (1-58)||(9264989-9265046)
chr1 (1-62)||(28011084-28011144)
chr1 (1-62)||(33488106-33488166)
chr1 (1-62)||(43555026-43555086)
chr1 (6-62)||(3163192-3163248)
chr1 (7-62)||(39655369-39655424)
chr1 (1-43)||(5653692-5653734)
chr1 (1-43)||(6920934-6920976)
chr1 (1-43)||(8462485-8462527)
chr1 (1-43)||(13352486-13352528)
chr1 (1-43)||(16011566-16011608)
chr1 (1-43)||(16630058-16630100)
chr1 (1-43)||(18127369-18127411)
chr1 (1-43)||(26834863-26834905)
chr1 (1-43)||(34347306-34347348)
chr1 (1-43)||(38238901-38238943)
chr1 (1-43)||(42709711-42709753)
chr1 (6-43)||(19010812-19010849)
chr1 (1-62)||(26061866-26061926)
chr1 (1-62)||(34022376-34022437)
chr1 (1-62)||(39674034-39674094)
chr1 (1-62)||(42219791-42219851)
chr1 (1-62)||(42787872-42787933)
chr1 (1-62)||(45430022-45430082)
chr1 (1-62)||(48747250-48747311)
chr1 (1-62)||(49872515-49872576)
chr1 (1-62)||(51417571-51417631)
chr1 (1-45)||(23825206-23825250)
chr1 (6-46)||(30093826-30093866)
chr1 (1-45)||(31023794-31023838)
[»] scaffold0983 (1 HSPs)
scaffold0983 (1-62)||(1274-1335)
[»] scaffold0768 (1 HSPs)
scaffold0768 (1-62)||(6105-6166)
[»] scaffold0654 (1 HSPs)
scaffold0654 (1-62)||(3033-3094)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-62)||(15935-15996)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-62)||(151656-151717)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-62)||(188793-188854)
[»] chr6 (25 HSPs)
chr6 (1-62)||(6833762-6833823)
chr6 (1-62)||(9461590-9461651)
chr6 (1-43)||(9961350-9961392)
chr6 (1-62)||(12058586-12058646)
chr6 (1-58)||(24430169-24430226)
chr6 (7-43)||(1114524-1114560)
chr6 (6-62)||(29901211-29901267)
chr6 (1-62)||(78532-78594)
chr6 (1-43)||(1778858-1778900)
chr6 (1-43)||(6612409-6612451)
chr6 (1-43)||(9660430-9660472)
chr6 (1-43)||(12499675-12499717)
chr6 (1-43)||(12507004-12507046)
chr6 (1-43)||(12509184-12509226)
chr6 (1-43)||(14304381-14304423)
chr6 (1-43)||(31003939-31003981)
chr6 (1-43)||(31949345-31949387)
chr6 (1-62)||(10629521-10629581)
chr6 (1-62)||(16465833-16465893)
chr6 (1-62)||(16524722-16524782)
chr6 (1-62)||(29343992-29344053)
chr6 (1-62)||(32609809-32609869)
chr6 (1-62)||(34283360-34283420)
chr6 (1-45)||(20605602-20605646)
chr6 (6-62)||(30238826-30238881)
[»] chr5 (23 HSPs)
chr5 (1-62)||(25538056-25538117)
chr5 (1-43)||(29619422-29619464)
chr5 (1-43)||(29665349-29665391)
chr5 (1-62)||(18026104-18026164)
chr5 (1-62)||(39729765-39729826)
chr5 (1-62)||(4744722-4744781)
chr5 (8-62)||(8050404-8050458)
chr5 (1-43)||(8225643-8225685)
chr5 (1-43)||(8542795-8542837)
chr5 (1-43)||(9461393-9461435)
chr5 (1-59)||(13662416-13662474)
chr5 (1-43)||(15856336-15856378)
chr5 (1-43)||(27187417-27187459)
chr5 (1-43)||(36302463-36302505)
chr5 (1-62)||(5288862-5288923)
chr5 (1-62)||(9641036-9641096)
chr5 (6-43)||(10370582-10370619)
chr5 (1-62)||(11247936-11247996)
chr5 (1-62)||(19282646-19282706)
chr5 (1-62)||(28024579-28024639)
chr5 (1-62)||(37881635-37881696)
chr5 (6-62)||(35809436-35809492)
chr5 (1-45)||(40555102-40555146)
[»] scaffold0789 (1 HSPs)
scaffold0789 (1-62)||(3328-3388)
[»] scaffold0734 (1 HSPs)
scaffold0734 (1-62)||(6283-6344)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-62)||(45598-45658)
[»] scaffold1515 (1 HSPs)
scaffold1515 (1-43)||(1480-1522)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-43)||(18397-18439)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-62)||(8454-8513)
[»] scaffold1335 (1 HSPs)
scaffold1335 (1-62)||(1373-1434)
[»] scaffold0366 (1 HSPs)
scaffold0366 (9-62)||(266-318)
[»] scaffold0308 (1 HSPs)
scaffold0308 (1-62)||(20684-20745)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-62)||(18883-18944)


Alignment Details
Target: scaffold0246 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 74 - 379
Target Start/End: Original strand, 12040 - 12331
Alignment:
Q  74 attgaatttcatgctaataaaggttcttgcggccgccgcagagactttggctaatactttgactagatcggctactgcgattcggatggatgctgagaga 173  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||              |||||||||||||||    
T  12040 attgaatttcatgctaataa-ggttcttgcggccgccgcagagattttggctaatactttgactagatcgg--------------atggatgctgagaga 12124  T
Q  174 agagttatggttacggttggagctaggtttataaacggagctttcatctgtttgggatctttcagaatccaagttcatccgccttcgttttgtttcaatg 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12125 agagttatggttacggttggagctaggtttataaacggagctttcttctgtttgggatctttcagaatccaagttcctccgccttcgttttgtttcaatg 12224  T
Q  274 gagcgccaaagaaga-ttttttcggtgactggtgttctgcggtttacacaatgagggacccttcaacccagcacagtacgtgttgtttacagtaagattt 372  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12225 gagcgccaaatgagatttttttcggtgactggtgttctgcggtttacacaatgagggacccttcaacccatcacagtacgtgttgtttacagtaagattt 12324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 6e-41; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 199 - 379
Target Start/End: Original strand, 28001383 - 28001563
Alignment:
Q  199 ggtttataaacggagctttcatctgtttgggatctttcagaatccaagttcatccgccttcgttttgtttcaatggagcgccaaagaagatttttt-cgg 297  Q
    |||||||| ||| ||||||| ||||||||| ||| ||| ||||||||||||  ||||||  |||||||||| |||||||| ||||| ||| ||||| |||    
T  28001383 ggtttatatacgtagctttcttctgtttgg-atcgttccgaatccaagttccgccgcctctgttttgtttcgatggagcgtcaaaggagactttttacgg 28001481  T
Q  298 tgactggtgttctgcggtttacacaatgagggacccttcaacccagcacagtacgtgttgtttacagtaagatttcagaggc 379  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||    
T  28001482 tgactggcgttctgctgtttacacaaggagggacccttcaacccatcacggtatgtgttgtttacagtaagattttagaggc 28001563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3873615 - 3873676
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  3873615 attggtattgtaaagcgacatataatttgggacaaatatttttccctaaagcgacatacaat 3873676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 518542 - 518481
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| ||||| ||||||||||||    
T  518542 attggtattgtaaagcgacatataatttgggacaaattttttttcctaaggcgacatacaat 518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1666963 - 1667024
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| || | ||||||||||||||||| ||||||||||| ||||||||||||    
T  1666963 attggtattgtaaagcggcatataatttgggacaaatttttttccctaaagcgacatacaat 1667024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4898332 - 4898393
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||  ||| |||||||||||||||||| |||||||||| ||||||||||||    
T  4898332 attggtattgtaaagtgacatataatttgggacaaatacttttccctaaagcgacatacaat 4898393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4945726 - 4945787
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||  ||| |||||||||||||||||| |||||||||| ||||||||||||    
T  4945726 attggtattgtaaagtgacatataatttgggacaaatacttttccctaaagcgacatacaat 4945787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41186859 - 41186817
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  41186859 attggtattgtaaagcgacgtataatttgggacaaatattttt 41186817  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2443484 - 2443545
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||||||| |  ||||||||| ||||||||||||    
T  2443484 attggtattgtaaagcgacatataatttgggacaaaaaaatttccctaaagcgacatacaat 2443545  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5443866 - 5443927
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| ||||||||   ||||||||||||||||||  |||||||||||    
T  5443866 attgatattgtaaaacgacatataatttaaaacaaatatttttccctaaaacgacatacaat 5443927  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14309109 - 14309169
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| ||||||||||||||||| |||||  |||| ||||||||||||    
T  14309109 attggtattgtaaaacgacatataatttgggacaaat-tttttttctaaagcgacatacaat 14309169  T

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Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40425165 - 40425226
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||  ||| || |||||||||||||| ||||||||||| ||||||||||||    
T  40425165 attggtattgtaaagtgacatacaatttgggacaaatttttttccctaaagcgacatacaat 40425226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 23494514 - 23494458
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||||||||  ||| ||||||||||||||||| ||||||||||| | ||||||||||    
T  23494514 tattgtaaagtgacatataatttgggacaaatttttttccctaaagtgacatacaat 23494458  T

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Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 29027041 - 29026985
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| ||||||||||||||||| ||||  ||||| ||||||||||||    
T  29027041 tattgtaaagcgacatataatttgggacaaattttttctcctaaagcgacatacaat 29026985  T

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Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 42784341 - 42784301
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccc 46  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  42784341 tattgtaaaacgacttataatttaggacaaatatttttccc 42784301  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 40483605 - 40483644
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttcc 45  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  40483605 tattgtaaaacgacatataatttgggacaaatttttttcc 40483644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5421510 - 5421468
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| || ||||||||||||||||||||    
T  5421510 attggtattgtaaaacgacatacaatttgggacaaatattttt 5421468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19576123 - 19576081
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  19576123 attggtattgtaaagcgacatataatttgggacaaatattttt 19576081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28206612 - 28206654
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  28206612 attggtattgtaaagcgacatataatttgggacaaatattttt 28206654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30780133 - 30780091
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  30780133 attgatattgtaaagcgacatataatttgggacaaatattttt 30780091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36443590 - 36443548
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||||||||||||| |||||||||||||    
T  36443590 attggtattgtaaagcgacgtataatttgagacaaatattttt 36443548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41787090 - 41787144
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgac 55  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||| |||| |||||    
T  41787090 attggtattgtaaagcgacatataatttgggacaaatttttttctctaaagcgac 41787144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2048202 - 2048263
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||| | |||||  |||| ||||||||||||    
T  2048202 attggtattgtaaagcgacatataatttgggacaattttttttttctaaagcgacatacaat 2048263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11216669 - 11216609
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||||||||||||||||||| | ||||| || || ||||||||||||    
T  11216669 attggtattgtaaagcgacgtataatttgggacaatttttttttcc-aaagcgacatacaat 11216609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21134611 - 21134668
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacata 58  Q
    |||| ||||||||| |||| |||||||||||||||| |  ||||||||| ||||||||    
T  21134611 attggtattgtaaagcgacatataatttgggacaaaaaaatttccctaaagcgacata 21134668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22154217 - 22154277
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  22154217 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 22154277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27863005 - 27863065
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  27863005 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 27863065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38959812 - 38959752
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  38959812 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 38959752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 6713958 - 6713902
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| ||||||||||||||||| ||||   |||| ||||||||||||    
T  6713958 tattgtaaagcgacatataatttgggacaaattttttctactaaagcgacatacaat 6713902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14885095 - 14885055
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattt 41  Q
    |||| |||||||||||||| |||||||||| ||||||||||    
T  14885095 attggtattgtaaaacgacatataatttggaacaaatattt 14885055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 27862762 - 27862711
Alignment:
Q  8 ttgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacataca 60  Q
    ||||||| |||| ||||||||||||| ||| ||||||||||| ||||||||||    
T  27862762 ttgtaaagcgacatataatttgggac-aatttttttccctaaagcgacataca 27862711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 79; Significance: 9e-37; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 199 - 376
Target Start/End: Complemental strand, 267464 - 267287
Alignment:
Q  199 ggtttataaacggagctttcatctgtttgggatctttcagaatccaagttcatccgccttcgttttgtttcaatggagcgccaaagaagatttttt-cgg 297  Q
    |||||||| ||| ||||||| ||||||||| ||| ||| ||||||||||||  ||| ||  |||||||||| |||||||| ||||| ||| ||||| |||    
T  267464 ggtttatatacgaagctttcttctgtttgg-atcattccgaatccaagttctgccgactctgttttgtttcgatggagcgtcaaaggagactttttacgg 267366  T
Q  298 tgactggtgttctgcggtttacacaatgagggacccttcaacccagcacagtacgtgttgtttacagtaagatttcaga 376  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| |||  || |||||||||||||||||||||||||    
T  267365 tgactggtgttctgctgtttacacaaggagggacctttcaacccatcacgatatgtgttgtttacagtaagatttcaga 267287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 2996 - 2941
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||||||||||||| ||||||||||||||||| ||||||||| | ||||| ||||||    
T  2996 tattgtaaaacgacatataatttgggacaaat-tttttccctgaagcgacgtacaat 2941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 74 - 200
Target Start/End: Original strand, 51254701 - 51254826
Alignment:
Q  74 attgaatttcatgctaataaaggttcttgcggccgccgcagagactttggctaatactttgactagatcggctactgcgattcggatggatgctgagaga 173  Q
    ||||| |||||||||||||| |||||||||||| |||||  ||| || ||| ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  51254701 attgattttcatgctaataa-ggttcttgcggcggccgcgcagatttcggcgaatactttgactagatcggctgctgcgattcggttggatgctgagaga 51254799  T
Q  174 agagttatggttacggttggagctagg 200  Q
    |||| ||||||| ||||||||||||||    
T  51254800 agagctatggttgcggttggagctagg 51254826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53334061 - 53334122
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  53334061 attgatattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaat 53334122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29832270 - 29832331
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||| |||| ||||||||||||    
T  29832270 attggtattgtaaagcgacatataatttgggacaaatttttttctctaaagcgacatacaat 29832331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32402756 - 32402695
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||| | ||||||||||| ||||||||||||    
T  32402756 attggtattgtaaagcgacatataatttgggacaattttttttccctaaagcgacatacaat 32402695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36878645 - 36878706
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| ||||||| ||||| |||||||| ||||||||||| ||||||||||||    
T  36878645 attggtattgtaaagcgacgtacaatttaggacaaatttttttccctaaagcgacatacaat 36878706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13397990 - 13398032
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  13397990 attggtattgtaaaacgacatataatttgggacaaatattttt 13398032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23237077 - 23237015
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaa-tatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||||||| | ||||||||||| ||||||||||||    
T  23237077 attggtattgtaaagcgacatataatttgggacaaattttttttccctaaagcgacatacaat 23237015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19877830 - 19877770
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||||||||| || || ||||||||||||    
T  19877830 attggtattgtaaagcgacatataatttgggacaaatattttttcc-aaagcgacatacaat 19877770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34735996 - 34735936
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||| ||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||    
T  34735996 attgatattttaaaacgacatataatttgggac-aatttttttccctaaagcgacatacaat 34735936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37912524 - 37912463
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||| ||||||| |||||| |||| ||||||||||||    
T  37912524 attggtattgtaaagcgacatataatttgagacaaatttttttctctaaagcgacatacaat 37912463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 49228105 - 49228165
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||| |||||||||||||| ||||| ||||||||||||    
T  49228105 attggtattgtaaagcgacatataattttggacaaatattttt-cctaaagcgacatacaat 49228165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 50533846 - 50533785
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||||||||||||||  |||| | ||||||||||    
T  50533846 attggtattgtaaagcgacatataatttgggacaaatatttttttctaaagtgacatacaat 50533785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 1788803 - 1788858
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| |||||||||||||||||||||||  |||| ||||||||||||    
T  1788803 tattgtaaagcgacatataatttgggacaaatattttt-tctaaagcgacatacaat 1788858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 38615266 - 38615321
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| |||||||| |||||||||||||| ||||| ||||||||||||    
T  38615266 tattgtaaagcgacatataatttaggacaaatattttt-cctaaagcgacatacaat 38615321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4294133 - 4294175
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  4294133 attggtattgtaaagcgacatataatttgggacaaatattttt 4294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13252361 - 13252403
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||||||||||||| |||||||||||||    
T  13252361 attggtattgtaaagcgacgtataatttgagacaaatattttt 13252403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13880528 - 13880486
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  13880528 attggtattgtaaagcgacatataatttgggacaaatattttt 13880486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20180444 - 20180402
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||    
T  20180444 attggtattgtaaagcgacgtacaatttgggacaaatattttt 20180402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23621715 - 23621673
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  23621715 attggtattgtaaagcgacatataatttgggacaaatattttt 23621673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28002591 - 28002549
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| ||||||||||||||||| |||||    
T  28002591 attggtattgtaaaacgacatataatttgggacaaattttttt 28002549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33244973 - 33245015
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  33244973 attggtattgtaaagcgacatataatttgggacaaatattttt 33245015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36871453 - 36871495
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  36871453 attggtattgtaaaacgacgtataatttgaaacaaatattttt 36871495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41458897 - 41458939
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| ||||||||| |||||||||||||    
T  41458897 attggtattgtaaaacgacatataatttgagacaaatattttt 41458939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 46390784 - 46390742
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  46390784 attggtattgtaaagcgacatataatttgggacaaatattttt 46390742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 47869245 - 47869287
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  47869245 attggtattgtaaagcgacatataatttgggacaaatattttt 47869287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10125685 - 10125745
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  10125685 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 10125745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19807031 - 19807092
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||  |||| | ||||||||||| ||||||||||||    
T  19807031 attggtattgtaaagcgacatataatttgatacaattttttttccctaaagcgacatacaat 19807092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22320606 - 22320545
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||  | || ||||||||||||    
T  22320606 attggtattgtaaagcgacatataatttgggacaaatttttttttccaaagcgacatacaat 22320545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22842982 - 22842922
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||  |||| ||||||||||||    
T  22842982 attggtattgtaaagcgacatataatttgggacaaat-tttttttctaaagcgacatacaat 22842922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37175374 - 37175434
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  37175374 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 37175434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 37730966 - 37731019
Alignment:
Q  9 tgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||||| |||| ||||||||| ||||||||||||||  ||| ||||||||||||    
T  37730966 tgtaaagcgacatataatttgagacaaatatttttcgttaaagcgacatacaat 37731019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38852841 - 38852902
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||  ||||  |||||||||||    
T  38852841 attggtattgtaaagcgacatataatttgggacaaatttttttttctaaaacgacatacaat 38852902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44197325 - 44197268
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacata 58  Q
    |||| ||||||||||||||||||||||| |||||| | ||||| |||||  |||||||    
T  44197325 attggtattgtaaaacgacgtataatttaggacaatttttttttcctaaaccgacata 44197268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 48510848 - 48510900
Alignment:
Q  9 tgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  48510848 tgtaaaacgacatataatttgggac-aattttttttcctaaagcgacatacaat 48510900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 51487751 - 51487812
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||  ||| ||||||||||||||| | |||||| |||| ||||||||||||    
T  51487751 attgatattgtaaagtgacatataatttgggacaattttttttctctaaagcgacatacaat 51487812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 56235226 - 56235166
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  56235226 attggtattgtaaagcgacttataatttgggacaaattttttttcc-aaagcgacatacaat 56235166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 56299757 - 56299720
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  56299757 tattgtaaaacgacatataatttggaacaaatattttt 56299720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 26799416 - 26799360
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||||||||| ||| ||||||||||||||||| ||||  ||||| ||| ||||||||    
T  26799416 tattgtaaaatgacatataatttgggacaaattttttctcctaaagcggcatacaat 26799360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 379
Target Start/End: Original strand, 29134916 - 29135090
Alignment:
Q  199 ggtttataaacggagctttcatctgtttgggatctttcagaatccaagttcatccgccttcgttttgtttcaatggagcgccaaagaagattttttcggt 298  Q
    |||||||| ||| ||||||| ||||||||| ||| ||| ||||||| ||||  ||||||  |||||||||| |||||||| |  |||   ||||| ||||    
T  29134916 ggtttatatacgtagctttcttctgtttgg-atcattctgaatccatgttccgccgcctctgttttgtttcgatggagcgtcggagac--tttttacggt 29135012  T
Q  299 gactggtgttctgcggtttacacaatgagggacccttcaacccagcacagtacgtgttgtttacagtaagatttcagaggc 379  Q
     ||||| ||||||| |||||||||| ||   |||||| |||||| ||| ||| |||||||||||| |||||||||||||||    
T  29135013 tactggcgttctgctgtttacacaagga---accctttaacccatcacggtatgtgttgtttacaataagatttcagaggc 29135090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1672902 - 1672959
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacata 58  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  1672902 attggtattgtaaagcgacgtataatttaggacaaatatttttccctaaagcgacata 1672959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43600945 - 43600884
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  43600945 attggtattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaat 43600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 51571829 - 51571768
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  51571829 attggtattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaat 51571768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30190400 - 30190358
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  30190400 attggtattgtaaaacgacatataatttgggacaaatattttt 30190358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32078096 - 32078054
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  32078096 attggtattgtaaaacgacatataatttgggacaaatattttt 32078054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41751178 - 41751136
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  41751178 attggtattgtaaaacgacatataatttgggacaaatattttt 41751136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45347204 - 45347246
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  45347204 attgatattgtaaaacgacgtataatttgggataaatattttt 45347246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4822884 - 4822945
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||| | |||||||||||||||||| || |||||||||    
T  4822884 attggtattgtaaagcgacatataatttagaacaaatatttttccctaaagcaacatacaat 4822945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5925376 - 5925317
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||    
T  5925376 attggtattgtaaaacgacatataattt-ggacaaat-tttttccctaaagcgacatacaat 5925317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33610295 - 33610356
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||  ||||| ||||||||||||    
T  33610295 attggtattgtaaagcgacctataatttgggacaaatcttttctcctaaagcgacatacaat 33610356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37331393 - 37331454
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| |||||||||| ||| || |||| |||||| ||||||||||||    
T  37331393 attggtattgtaaaacgacatataatttggaacacattttttcccctaaagcgacatacaat 37331454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39259335 - 39259275
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| ||||| ||||||||||||    
T  39259335 attgatattgtaaagcgacatataatttgggacaaat-ttttttcctaaagcgacatacaat 39259275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40710717 - 40710777
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||||||||||||||  |||| ||||||||||||    
T  40710717 attgatattgtaaagcgacatataatttgggacaaatattttt-tctaaagcgacatacaat 40710777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2510230 - 2510272
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  2510230 attggtattgtaaagcgacatataatttgggacaaatattttt 2510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15999023 - 15999065
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  15999023 attggtattgtaaagcgacatataatttgggacaaatattttt 15999065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34663507 - 34663465
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  34663507 attggtattgtaaagcgacatataatttgggacaaatattttt 34663465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38783646 - 38783688
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  38783646 attggtattgtaaagcgacatataatttgggacaaatattttt 38783688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43109669 - 43109627
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||||||||||||||||||||| |||||    
T  43109669 attggtattgtaaagcgacgtataatttgggacaaattttttt 43109627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43599647 - 43599605
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  43599647 attggtattgtaaagcgacatataatttgggacaaatattttt 43599605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45824090 - 45824132
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  45824090 attggtattgtaaagcgacatataatttgggacaaatattttt 45824132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 54747912 - 54747954
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  54747912 attggtattgtaaagcgacatataatttgggacaaatattttt 54747954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 335896 - 335956
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| ||||||||  ||||||||||||| | ||| ||||||||||||    
T  335896 attggtattgtaaaacgacatataatttatgacaaatattttt-cataaagcgacatacaat 335956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18019654 - 18019714
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| || ||||||| |||||| ||||||||||| ||||||||||||    
T  18019654 attggtattgtaaagcgacatacaatttgg-acaaatttttttccctaaagcgacatacaat 18019714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21272705 - 21272645
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| || |||||| ||||||| ||||||||||| ||||||||||||    
T  21272705 attggtattgtaaagcgacatacaatttgagacaaat-tttttccctaaagcgacatacaat 21272645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23609438 - 23609498
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| || ||||||||||||||||||||  |||| ||||||||||||    
T  23609438 attggtattgtaaagcgacatacaatttgggacaaatattttt-tctaaagcgacatacaat 23609498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37056693 - 37056632
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| || ||||| |||||| | ||||||||||| ||||||||||||    
T  37056693 attggtattgtaaagcgacatacaattttggacaattttttttccctaaagcgacatacaat 37056632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43185421 - 43185361
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  43185421 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 43185361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49818355 - 49818314
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttt 42  Q
    |||| |||||||||||||| ||||||||||||||||| ||||    
T  49818355 attggtattgtaaaacgacatataatttgggacaaatttttt 49818314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 50622706 - 50622747
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttt 42  Q
    |||| ||| |||||||||| ||||||||||||||||||||||    
T  50622706 attggtatcgtaaaacgacatataatttgggacaaatatttt 50622747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52870642 - 52870702
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  52870642 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 52870702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 23307848 - 23307793
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||||| || ||||||||||||| ||| |||| |||||| ||||||||||||    
T  23307848 tattgtaaaacaacatataatttgggac-aattttttcccctaaagcgacatacaat 23307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 51380234 - 51380289
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  51380234 tattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 51380289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31602918 - 31602979
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  31602918 attggtattgtaaaacgacatataatttgggacaaatttttttccctaaagcgacatacaat 31602979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 44263316 - 44263372
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  44263316 tattgtaaagcgacatataatttgggacaaatatttttccctaaagcgacatacaat 44263372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5449506 - 5449567
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||| |||||||||||||||||||| ||||||||||||    
T  5449506 attggtattgtaaagcgacatataatttaggacaaatatttttccctaaagcgacatacaat 5449567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39628919 - 39628858
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  39628919 attgatattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaat 39628858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39638469 - 39638408
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  39638469 attgatattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaat 39638408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3598846 - 3598907
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||| ||||||||||||||||||  |||||||||||    
T  3598846 attggtattgtaaagcgacatataatttggaacaaatatttttccctaaaacgacatacaat 3598907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26394024 - 26394085
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||||||| ||||| |||||| ||||||||||||    
T  26394024 attggtattgtaaagcgacatataatttgggacaaaaattttcccctaaagcgacatacaat 26394085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29342783 - 29342723
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  29342783 attggtattgtaaagcgacatataatttgggacaaatattttt-cctaaagcgacatacaat 29342723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34356591 - 34356531
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  34356591 attggtattgtaaagcgacatataatttgggacaaat-tttttccctaaggcgacatacaat 34356531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 2120470 - 2120525
Alignment:
Q  7 attgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||||||||| |||||||||||||||||||| |||| | |||| ||||||||||||    
T  2120470 attgtaaaacaacgtataatttgggacaaattttttcctctaaagcgacatacaat 2120525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15225916 - 15225857
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||  || ||||||||||||    
T  15225916 attggtattgtaaaacgacatataatttgggacaaatttttttcc--aaagcgacatacaat 15225857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31873624 - 31873666
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  31873624 attggtattgtaaagcgacgtataatttgggacaaatattttt 31873666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 899575 - 899627
Alignment:
Q  9 tgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||||| |||||||||||||||||||||||  |||| ||||||||||||    
T  899575 tgtaaaacgacatataatttgggacaaatattttt-tctaaagcgacatacaat 899627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4395469 - 4395529
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||| |||| ||||||||||||    
T  4395469 attggtattgtaaagcgacatataatttgggacaaat-tttttcactaaagcgacatacaat 4395529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12988186 - 12988247
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||  |||||||||||  |||||||||||    
T  12988186 attggtattgtaaagcgacatataatttgggacaaaattttttccctaaaacgacatacaat 12988247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44052949 - 44052888
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||| |||||| | ||||||||||| ||||||||||||    
T  44052949 attgatattgtaaagcgacatataatttaggacaattttttttccctaaagcgacatacaat 44052888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2099168 - 2099210
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  2099168 attgatattgtaaagcgacatataatttgggacaaatattttt 2099210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9268007 - 9268049
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  9268007 attggtattgtaaagcgacatataatttgggacaaatattttt 9268049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13429145 - 13429103
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  13429145 attggtattgtaaagcgacatataatttgggacaaatattttt 13429103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14810082 - 14810124
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| ||||||||||||||||| |||||    
T  14810082 attggtattgtaaaacgacatataatttgggacaaattttttt 14810124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24422514 - 24422556
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  24422514 attggtattgtaaagcgacatataatttgggacaaatattttt 24422556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24612920 - 24612878
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||| ||||||||||||||    
T  24612920 attggtattgtaaaacgacatataatttaggacaaatattttt 24612878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29938367 - 29938325
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| || ||||||||||||||||||||    
T  29938367 attggtattgtaaaacgacatacaatttgggacaaatattttt 29938325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31231079 - 31231121
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  31231079 attggtattgtaaagcgacatataatttgggacaaatattttt 31231121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31692810 - 31692751
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||||  || ||||||||||||    
T  31692810 attggtattgtaaagcgacatataatttgggacaaatttttttcc--aaagcgacatacaat 31692751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43564662 - 43564603
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||||  || ||||||||||||    
T  43564662 attgatattgtaaagcgacatataatttgggacaaatttttttcc--aaagcgacatacaat 43564603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9724661 - 9724600
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||| |||| |||| ||||||||||||||| | ||||| ||||| ||||||||||||    
T  9724661 attggtattttaaagcgacatataatttgggacaatttttttttcctaaagcgacatacaat 9724600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 14433358 - 14433395
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  14433358 tattgtaaagcgacatataatttgggacaaatattttt 14433395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15286564 - 15286609
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccc 46  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||||    
T  15286564 attggtattgtaaaacgacatataatttgggacaattttttttccc 15286609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15466933 - 15466978
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccc 46  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||||    
T  15466933 attggtattgtaaaacgacatataatttgggacaattttttttccc 15466978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17833986 - 17833925
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||| |||||| | ||||| ||||| ||||||||||||    
T  17833986 attggtattgtaaagcgacatataatttaggacaatttttttttcctaaagcgacatacaat 17833925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21545332 - 21545271
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||  |||||| ||||| ||||||    
T  21545332 attggtattgtaaagcgacatataatttgggacaaatttttccccctaaagcgacgtacaat 21545271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26805029 - 26805089
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||| |||| |||||||||||  |||||||||||    
T  26805029 attgatattgtaaagcgacatataatttgggataaat-tttttccctaaaacgacatacaat 26805089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28849033 - 28848973
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  28849033 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 28848973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 29949169 - 29949132
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||||||||||||| || ||||||||||||||||||||    
T  29949169 tattgtaaaacgacatacaatttgggacaaatattttt 29949132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 32642622 - 32642663
Alignment:
Q  21 tataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  32642622 tataatttgggacaaatttttttctctaaagcgacatacaat 32642663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 1366818 - 1366763
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  1366818 tattgtaaagcgacttataatttgggacaaattttttttcc-aaagcgacatacaat 1366763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 10709309 - 10709365
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| ||||||||||||||||| ||||  ||||  ||||||||||||    
T  10709309 tattgtaaagcgacatataatttgggacaaattttttctcctagagcgacatacaat 10709365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 45439589 - 45439545
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttcc 45  Q
    |||| |||||||||||||| |||||||||| |||||| |||||||    
T  45439589 attggtattgtaaaacgacatataatttggaacaaatttttttcc 45439545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30264504 - 30264443
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  30264504 attggtattgtaaagcgacatataatttgggacaaatattttttcctaaagcgacatacaat 30264443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2849975 - 2850036
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||||| || ||||||||||| ||||||||||||    
T  2849975 attggtattgtaaagcgacatataatttgggacacatttttttccctaaagcgacatacaat 2850036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22326730 - 22326791
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||| |||||| ||||||||||| ||||||||||||    
T  22326730 attggtattgtaaagcgacatataatttggaacaaatttttttccctaaagcgacatacaat 22326791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31502885 - 31502825
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  31502885 attgatattgtaaagcgacatataatttgggacaaatattttt-cctaaagcgacatacaat 31502825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13439394 - 13439352
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  13439394 attggtattgtaaagcgacgtataatttgggacaaatattttt 13439352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10316626 - 10316565
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||  ||||||||||||||| | ||||||| ||| ||||||||||||    
T  10316626 attggtattgtaaaacgaaatataatttgggacaagtttttttccttaaagcgacatacaat 10316565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18976016 - 18975955
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||| ||||||| |||||| |||| ||||||||||||    
T  18976016 attggtattgtaaagcgacatataatttgagacaaatttttttctctaaagcgacatacaat 18975955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21849853 - 21849914
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| ||||||||| ||||| | ||||| ||||| ||||||||||||    
T  21849853 attggtattgtaaaacgacatataatttgagacaatttttttttcctaaagcgacatacaat 21849914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22369581 - 22369520
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||| |||  ||||||||||| ||||||||||||    
T  22369581 attggtattgtaaagcgacatataatttgggagaaaattttttccctaaagcgacatacaat 22369520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28587012 - 28586956
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacata 58  Q
    |||| ||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||    
T  28587012 attggtattgtaaagcgacatataatttgggacaaatattttt-cctaaagcgacata 28586956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29410290 - 29410350
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||| ||| ||||||||||||||||| ||||| ||||| ||||||||||||    
T  29410290 attggtattgtaaaatgacatataatttgggacaaat-ttttttcctaaagcgacatacaat 29410350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41877777 - 41877720
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacata 58  Q
    |||| ||||||||| |||| |||||||||| |||||| ||||||||||| ||||||||    
T  41877777 attggtattgtaaagcgacatataatttggaacaaatttttttccctaaagcgacata 41877720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43073935 - 43073996
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||| |||||| || |||||||||    
T  43073935 attggtattgtaaagcgacatataatttgggacaaattttttcccctaaagcaacatacaat 43073996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44452265 - 44452204
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||||||| |  ||||||||| ||||||||||||    
T  44452265 attggtattgtaaagcgacatataatttgggacaaaaaaatttccctaaagcgacatacaat 44452204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 40020374 - 40020318
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||||||||||||  ||||||||||||||||| ||||  ||||| ||||||||||||    
T  40020374 tattgtaaaacgagatataatttgggacaaattttttctcctaaagcgacatacaat 40020318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47578884 - 47578927
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttc 44  Q
    |||| |||||||||||||| || |||||||||||||||||||||    
T  47578884 attggtattgtaaaacgacatacaatttgggacaaatatttttc 47578927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6882917 - 6882875
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  6882917 attggtattgtaaagcgacatataatttgggacaaatattttt 6882875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8611890 - 8611848
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  8611890 attggtattgtaaagcgacatataatttgggacaaatattttt 8611848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10453112 - 10453154
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||||||||||||| |||||||||||||    
T  10453112 attggtattgtaaagcgacgtataatttgagacaaatattttt 10453154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11910636 - 11910678
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||| | |||||||||||||||||||||||    
T  11910636 attggtattgtaaaacggcatataatttgggacaaatattttt 11910678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23059147 - 23059105
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  23059147 attggtattgtaaagcgacatataatttgggacaaatattttt 23059105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32466362 - 32466421
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||||  || ||||||||||||    
T  32466362 attggtattgtaaagcgacatataatttgggacaaatttttttcc--aaagcgacatacaat 32466421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35144291 - 35144333
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  35144291 attggtattgtaaagcgacatataatttgggacaaatattttt 35144333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 47834356 - 47834398
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  47834356 attgatattgtaaagcgacatataatttgggacaaatattttt 47834398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 4513569 - 4513606
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||||||||||||| || ||||||||||||||||||||    
T  4513569 tattgtaaaacgacatacaatttgggacaaatattttt 4513606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28703620 - 28703560
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||  |||| ||||||||||||    
T  28703620 attggtattgtaaagcgacatataatttgggacaaat-tttttttctaaagcgacatacaat 28703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 29409398 - 29409361
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  29409398 tattgtaaagcgacgtataatttggaacaaatattttt 29409361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30803361 - 30803301
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  30803361 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 30803301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31466125 - 31466065
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  31466125 attggtattgtaaagcgacttataatttgggacaaattttttttcc-aaagcgacatacaat 31466065  T

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Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 48339518 - 48339464
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||||||||||||| ||||||||||||||| | |||||||  || ||||||||||||    
T  48339518 tattgtaaaacgacatataatttgggacaattttttttcc--aaagcgacatacaat 48339464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 27059748 - 27059803
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  27059748 tattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 27059803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 32467879 - 32467824
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| ||||||||||||||||| |||||  |||| ||||||||||||    
T  32467879 tattgtaaagcgacatataatttgggacaaat-tttttttctaaagcgacatacaat 32467824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 41820939 - 41820903
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaat 37  Q
    |||| |||||||||||||| |||||||||||||||||    
T  41820939 attggtattgtaaaacgacatataatttgggacaaat 41820903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 41887780 - 41887835
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||| |||| ||||||||||||||| | ||||||||||| ||||||||||||    
T  41887780 tattttaaagcgacatataatttgggacaatt-tttttccctaaagcgacatacaat 41887835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52001213 - 52001274
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  52001213 attgatattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaat 52001274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16051852 - 16051913
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| || |||||||||||||| ||||||||||| ||||||||||||    
T  16051852 attggtattgtaaagcgacatacaatttgggacaaatttttttccctaaagcgacatacaat 16051913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30469592 - 30469531
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||| |||||||| ||||||||||| ||||||||||||    
T  30469592 attggtattgtaaagcgacatataattttggacaaatttttttccctaaagcgacatacaat 30469531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 13896573 - 13896625
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacata 58  Q
    |||||||||||||| |||||||| |||||||||||||| ||||| ||||||||    
T  13896573 tattgtaaaacgacatataatttaggacaaatattttttcctaaggcgacata 13896625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 17180744 - 17180688
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| |||||||||| |||||| ||||||||||| ||||||||||||    
T  17180744 tattgtaaagcgacatataatttggaacaaatttttttccctaaagcgacatacaat 17180688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 52666883 - 52666828
Alignment:
Q  7 attgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||||||| |||||||||||||||| ||||| | |||| ||||||||||||    
T  52666883 attgtaaaacgacatataatttgggacaaaaattttcctctaaagcgacatacaat 52666828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21362523 - 21362469
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgac 55  Q
    |||| |||| |||| |||| ||||||||||||||||||||||||||||| |||||    
T  21362523 attggtattataaagcgacatataatttgggacaaatatttttccctaaagcgac 21362469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24322723 - 24322769
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccct 47  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||    
T  24322723 attggtattgtaaagcgacatataatttgggacaaatatttttccct 24322769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7572509 - 7572570
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||||||||  |||||||| ||||||| |||||| |||| ||||||||||||    
T  7572509 attgatattgtaaaacgacaaataatttgcgacaaatttttttctctaaagcgacatacaat 7572570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9264989 - 9265046
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacata 58  Q
    |||| ||||||||| |||| |||||||||||||||||||||| ||||||  |||||||    
T  9264989 attgatattgtaaagcgacatataatttgggacaaatattttcccctaaaacgacata 9265046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28011144 - 28011084
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| || |||||||||||||| ||||||||||| ||||||||||||    
T  28011144 attggtattgtaaagcgacatacaatttgggacaaat-tttttccctaaagcgacatacaat 28011084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33488106 - 33488166
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| ||||||||||||||||| |||||  |||| ||||||||||||    
T  33488106 attggtattgtaaaacgacatataatttgggacaaat-tttttttctaaagcgacatacaat 33488166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43555026 - 43555086
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||| |||| ||||||||||||    
T  43555026 attggtattgtaaagcgacatataatttgggacaaat-tttttctctaaagcgacatacaat 43555086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 3163248 - 3163192
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| ||||||||||||||||| ||||  ||||| ||||||||||||    
T  3163248 tattgtaaagcgacatataatttgggacaaattttttctcctaaagcgacatacaat 3163192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 39655424 - 39655369
Alignment:
Q  7 attgtaaaacgacgtataatttgggacaaatatttttcc-ctaacgcgacatacaat 62  Q
    ||||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||    
T  39655424 attgtaaaacgacatataatttgggacaaa-atttttcctctaaagcgacatacaat 39655369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5653692 - 5653734
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| || ||||||||||||||||||||    
T  5653692 attggtattgtaaaacgacatacaatttgggacaaatattttt 5653734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6920934 - 6920976
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  6920934 attggtattgtaaagcgacatataatttgggacaaatattttt 6920976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8462485 - 8462527
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| ||||||||| |||||||||||||    
T  8462485 attggtattgtaaaacgacatataatttgagacaaatattttt 8462527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13352528 - 13352486
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  13352528 attggtattgtaaagcgacatataatttgggacaaatattttt 13352486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16011566 - 16011608
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||    
T  16011566 attggtattgtaaagcgacgtacaatttgggacaaatattttt 16011608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16630058 - 16630100
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| || ||||||||||||||||||||    
T  16630058 attggtattgtaaaacgacatacaatttgggacaaatattttt 16630100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18127411 - 18127369
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  18127411 attggtattgtaaagcgacatataatttgggacaaatattttt 18127369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26834905 - 26834863
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  26834905 attggtattgtaaagcgacatataatttgggacaaatattttt 26834863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34347348 - 34347306
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  34347348 attggtattgtaaagcgacatataatttgggacaaatattttt 34347306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38238943 - 38238901
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  38238943 attggtattgtaaagcgacatataatttgggacaaatattttt 38238901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42709753 - 42709711
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  42709753 attggtattgtaaagcgacatataatttgggacaaatattttt 42709711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 19010849 - 19010812
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  19010849 tattgtaaatcgacatataatttgggacaaatattttt 19010812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26061866 - 26061926
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| ||||||||||||| ||| ||||| ||||| | ||||||||||    
T  26061866 attgatattgtaaaacgacatataatttgggac-aattttttttcctaaagtgacatacaat 26061926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34022376 - 34022437
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||| ||||||| |  ||||||||| ||||||||||||    
T  34022376 attgatattgtaaagcgacatataatttaggacaaaaaaatttccctaaagcgacatacaat 34022437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39674094 - 39674034
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||| |||| |||||||||||||| ||||| | ||||||||||| ||||||||||||    
T  39674094 attggtattttaaagcgacgtataatttgcgacaatt-tttttccctaaagcgacatacaat 39674034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42219791 - 42219851
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  42219791 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 42219851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42787933 - 42787872
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||  ||||||| |||| |||||| ||||||||||||    
T  42787933 attggtattgtaaagcgacatataatttatgacaaattttttcccctaaagcgacatacaat 42787872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45430082 - 45430022
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| |||||||| |||||||| |||||||| ||  |||||||||||    
T  45430082 attggtattgtaaaacgacatataattt-ggacaaatttttttcccaaaaacgacatacaat 45430022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48747311 - 48747250
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||||||| |  ||||||||| | ||||||||||    
T  48747311 attggtattgtaaagcgacatataatttgggacaaaaaaatttccctaaagagacatacaat 48747250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 49872576 - 49872515
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||| |||| |||| ||||||||||||| | | ||||||||||| ||||||||||||    
T  49872576 attgatattttaaagcgacatataatttgggactattttttttccctaaagcgacatacaat 49872515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 51417571 - 51417631
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| |||||||||||| |||| ||||| || || ||||||||||||    
T  51417571 attggtattgtaaaacgacatataatttgggataaattttttttcc-aaagcgacatacaat 51417631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23825206 - 23825250
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttcc 45  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  23825206 attggtattgtaaagcgacatataatttgggacaaatttttttcc 23825250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 30093826 - 30093866
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccc 46  Q
    ||||||| | |||||||||||||||||||||| ||||||||    
T  30093826 tattgtatagcgacgtataatttgggacaaatttttttccc 30093866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31023794 - 31023838
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttcc 45  Q
    |||| |||||||||||||| ||||||||||||||| | |||||||    
T  31023794 attgatattgtaaaacgacatataatttgggacaattttttttcc 31023838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1274 - 1335
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||| || |||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  1274 attgatattgtgaagcgacatataatttgggacaaatttttttccctaaagcgacatacaat 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6105 - 6166
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||| ||||||| ||||||||||| ||||||||||||    
T  6105 attggtattgtaaagcgacatataatttgagacaaatttttttccctaaagcgacatacaat 6166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3033 - 3094
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||| |||| ||||||||||||    
T  3033 attggtattgtaaagcgacatataatttgggacaaatttttttcgctaaagcgacatacaat 3094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15935 - 15996
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  15935 attgatattgtaaagcgacatataatttgggacaaattttttcccctaaagcgacatacaat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 151717 - 151656
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||||||||  ||||| ||||||||||||    
T  151717 attgatattgtaaagcgacatataatttgggacaaatattttctcctaaagcgacatacaat 151656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 188793 - 188854
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||| | ||||||||||| ||||||||||||    
T  188793 attggtattgtaaatcgacatataatttgggacaattttttttccctaaagcgacatacaat 188854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6833823 - 6833762
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||| ||||||| ||||||||||| ||||||||||||    
T  6833823 attggtattgtaaagcgacatataatttgagacaaatttttttccctaaagcgacatacaat 6833762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9461651 - 9461590
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||||||||||||| |||| |||||||||||||||||||||||  |||| | ||||||||||    
T  9461651 attgttattgtaaagcgacatataatttgggacaaatatttttttctaaagtgacatacaat 9461590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9961392 - 9961350
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  9961392 attggtattgtaaaacgacatataatttgggacaaatattttt 9961350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12058646 - 12058586
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||||||||||||||  |||| ||||||||||||    
T  12058646 attggtattgtaaagcgacatataatttgggacaaatattttt-tctaaagcgacatacaat 12058586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24430226 - 24430169
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacata 58  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||||||||  |||||||    
T  24430226 attggtattgtaaagcgacatataatttgggacaaatttttttccctaaaacgacata 24430169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 1114524 - 1114560
Alignment:
Q  7 attgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||||||| ||||||||||||||||||||||||||||    
T  1114524 attgtaaagcgacgtataatttgggacaaatattttt 1114560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 29901267 - 29901211
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| ||||||||||||||||| ||||  ||||| ||||||||||||    
T  29901267 tattgtaaagcgacatataatttgggacaaattttttctcctaaagcgacatacaat 29901211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 78532 - 78594
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaa-atatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||||||  | ||||||||||| ||||||||||||    
T  78532 attggtattgtaaagcgacatataatttgggacaatttttttttccctaaagcgacatacaat 78594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1778900 - 1778858
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| || ||||||||||||||||||||    
T  1778900 attggtattgtaaaacgacatacaatttgggacaaatattttt 1778858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6612451 - 6612409
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||    
T  6612451 attggtattgtaaagcgacgtacaatttgggacaaatattttt 6612409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9660430 - 9660472
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  9660430 attggtattgtaaagcgacatataatttgggacaaatattttt 9660472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12499675 - 12499717
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||||| ||||||||||||    
T  12499675 attggtattgtaaaacgacatataatttggaacaaatattttt 12499717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12507004 - 12507046
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||||| ||||||||||||    
T  12507004 attggtattgtaaaacgacatataatttggaacaaatattttt 12507046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12509226 - 12509184
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||||| ||||||||||||    
T  12509226 attggtattgtaaaacgacatataatttggaacaaatattttt 12509184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14304423 - 14304381
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||||| ||||||||||||    
T  14304423 attggtattgtaaaacgacatataatttggaacaaatattttt 14304381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31003981 - 31003939
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||| ||| |||||||||||||||||||||||    
T  31003981 attgctattgtaaaatgacatataatttgggacaaatattttt 31003939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31949345 - 31949387
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| || ||||||||||||||||||||    
T  31949345 attggtattgtaaaacgacatacaatttgggacaaatattttt 31949387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10629521 - 10629581
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  10629521 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 10629581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16465893 - 16465833
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| ||||||||| |||||| ||||||| |||| |||| |||||||    
T  16465893 attggtattgtaaaacgacatataatttgagacaaa-atttttctctaaagcgagatacaat 16465833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16524722 - 16524782
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  16524722 attggtattgtaaagcgacatataatttgggacaaattttttttcc-aaagcgacatacaat 16524782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29344053 - 29343992
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||| |||| |||| ||||||||||||||||| ||||||| |||  |||||||||||    
T  29344053 attggtattttaaagcgacatataatttgggacaaatttttttccttaaaacgacatacaat 29343992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32609869 - 32609809
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||| ||| |||| |||||| ||||||||||||    
T  32609869 attggtattgtaaagcgacatataatttgggac-aattttttcccctaaagcgacatacaat 32609809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34283420 - 34283360
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  34283420 attggtattgtaaagcgacttataatttgggacaaattttttttcc-aaagcgacatacaat 34283360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20605646 - 20605602
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttcc 45  Q
    |||| ||||||||| |||| |||||||| ||||||||||||||||    
T  20605646 attggtattgtaaagcgacatataatttaggacaaatatttttcc 20605602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 30238881 - 30238826
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||||||||| |||| | ||||||||||| ||||||||||||    
T  30238881 tattttaaaacgacatataatttggaacaatt-tttttccctaaagcgacatacaat 30238826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25538117 - 25538056
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||||||| |||||||| | |||||| ||||||||||| ||||||||||||    
T  25538117 attggtattgtaaaacgacatataatttagaacaaatttttttccctaaagcgacatacaat 25538056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29619422 - 29619464
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  29619422 attggtattgtaaaacgacatataatttgggacaaatattttt 29619464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29665391 - 29665349
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  29665391 attgatattgtaaaacgacatataatttgggacaaatattttt 29665349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18026104 - 18026164
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||||||||| || || ||||||||||||    
T  18026104 attgatattgtaaagcgacatataatttgggacaaatattttttcc-aaagcgacatacaat 18026164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39729765 - 39729826
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||| || |||| ||||||||||||    
T  39729765 attggtattgtaaagcgacatataatttgggacaaatttttctctctaaagcgacatacaat 39729826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4744781 - 4744722
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||||  || ||||||||||||    
T  4744781 attggtattgtaaagcgacatataatttgggacaaatttttttcc--aaagcgacatacaat 4744722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 8050458 - 8050404
Alignment:
Q  8 ttgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||| |||| |||||||| |||||||| |||| |||||| ||||||||||||    
T  8050458 ttgtaaagcgacatataatttaggacaaattttttcccctaaagcgacatacaat 8050404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8225685 - 8225643
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  8225685 attggtattgtaaagcgacatataatttgggacaaatattttt 8225643  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8542837 - 8542795
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  8542837 attggtattgtaaagcgacatataatttgggacaaatattttt 8542795  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9461435 - 9461393
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  9461435 attggtattgtaaagcgacatataatttgggacaaatattttt 9461393  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13662416 - 13662474
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatac 59  Q
    |||| ||||||||| |||| || |||||||||||||| |||||||||||  ||||||||    
T  13662416 attggtattgtaaagcgacatacaatttgggacaaatttttttccctaaaacgacatac 13662474  T

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Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15856378 - 15856336
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| ||||||||| |||||||||||||    
T  15856378 attgatattgtaaaacgacatataatttgagacaaatattttt 15856336  T

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Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27187417 - 27187459
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  27187417 attggtattgtaaagcgacatataatttgggacaaatattttt 27187459  T

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Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36302463 - 36302505
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  36302463 attggtattgtaaagcgacatataatttgggacaaatattttt 36302505  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5288923 - 5288862
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||| ||||||| |||| ||||||  |||||||||||    
T  5288923 attggtattgtaaagcgacatataatttgagacaaattttttcccctaaaacgacatacaat 5288862  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9641096 - 9641036
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||    
T  9641096 attggtattgtaaagcgacttataatttgggacaaattttttttcc-aaagcgacatacaat 9641036  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 10370619 - 10370582
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  10370619 tattgtaaagcgacatataatttgggacaaatattttt 10370582  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11247996 - 11247936
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||  |||| ||||||||||||    
T  11247996 attggtattgtaaagcgacatataatttgggacaaat-tttttttctaaagcgacatacaat 11247936  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19282646 - 19282706
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||||||||||||| ||||||| |||||  |||| ||||||||||||    
T  19282646 attggtattgtaaagcgacgtataatttgagacaaat-ttttttgctaaagcgacatacaat 19282706  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28024639 - 28024579
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||| ||||||||| ||||||||| ||||| | ||||||||||| ||||||||||||    
T  28024639 attggtattttaaaacgacatataatttgagacaatt-tttttccctaaagcgacatacaat 28024579  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37881635 - 37881696
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||||||||||| |   |||||||| ||||||||||||    
T  37881635 attggtattgtaaagcgacatataatttgggacaaaaaaaattccctaaagcgacatacaat 37881696  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 35809436 - 35809492
Alignment:
Q  6 tattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||| |||| ||||||||||||||||| ||||  ||||| || |||||||||    
T  35809436 tattgtaaagcgacatataatttgggacaaattttttctcctaaagcaacatacaat 35809492  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40555146 - 40555102
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttcc 45  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  40555146 attggtattgtaaagcgacatataatttgggacaaatttttttcc 40555102  T

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Target: scaffold0789 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3388 - 3328
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||| ||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||    
T  3388 attggtattttaaaacgacatataatttgggac-aatttttttccctaaagcgacatacaat 3328  T

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Target: scaffold0734 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6344 - 6283
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||    
T  6344 attggtattgtaaagcgacatataaattgagacaaatatttttccctaaaacgacatacaat 6283  T

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Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45658 - 45598
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||| ||||| ||||||||||||| ||| ||||||||||| ||||||||||||    
T  45658 attggtattgtaacacgacatataatttgggac-aatttttttccctaaagcgacatacaat 45598  T

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Target: scaffold1515 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1515
Description:

Target: scaffold1515; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1522 - 1480
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| |||||||||||||| |||||||| ||||||||||||||    
T  1522 attggtattgtaaaacgacatataatttaggacaaatattttt 1480  T

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Target: scaffold0172 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18397 - 18439
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatattttt 43  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  18397 attgatattgtaaagcgacatataatttgggacaaatattttt 18439  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8513 - 8454
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||||  || ||||||||||||    
T  8513 attggtattgtaaagcgacatataatttgggacaaatttttttcc--aaagcgacatacaat 8454  T

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Target: scaffold1335 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1335
Description:

Target: scaffold1335; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1373 - 1434
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| ||||||||| |||| |||||||| || ||||||||||||| ||| ||||| ||||||    
T  1373 attggtattgtaaagcgacatataatttaggtcaaatatttttccttaaagcgacgtacaat 1434  T

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Target: scaffold0366 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 266 - 318
Alignment:
Q  9 tgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    ||||||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  266 tgtaaaacgacatataatttgggac-aattttttttcctaaagcgacatacaat 318  T

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Target: scaffold0308 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20745 - 20684
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||| |||| |||| ||||||||||||||| | ||||| ||||| ||||||||||||    
T  20745 attggtattttaaagcgacatataatttgggacaatttttttttcctaaagcgacatacaat 20684  T

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Target: scaffold0264 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18883 - 18944
Alignment:
Q  1 attgttattgtaaaacgacgtataatttgggacaaatatttttccctaacgcgacatacaat 62  Q
    |||| |||||||||  ||| || |||||||||||||| ||||||||||| | ||||||||||    
T  18883 attggtattgtaaagagacatacaatttgggacaaatttttttccctaaagtgacatacaat 18944  T

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