View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9681_high_1 (Length: 525)

Name: NF9681_high_1
Description: NF9681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9681_high_1
NF9681_high_1
[»] chr3 (4 HSPs)
chr3 (1-511)||(290284-290794)
chr3 (1-254)||(279839-280092)
chr3 (291-377)||(280210-280296)
chr3 (430-482)||(8354176-8354228)
[»] chr2 (9 HSPs)
chr2 (1-491)||(24532011-24532497)
chr2 (1-511)||(24525339-24525846)
chr2 (430-484)||(42436450-42436504)
chr2 (430-482)||(1979988-1980040)
chr2 (430-482)||(4789262-4789314)
chr2 (432-480)||(16107393-16107441)
chr2 (430-477)||(106466-106512)
chr2 (430-460)||(16549969-16549999)
chr2 (430-491)||(3829243-3829304)
[»] chr7 (3 HSPs)
chr7 (395-497)||(6015774-6015876)
chr7 (395-477)||(13316515-13316596)
chr7 (430-475)||(17257432-17257476)
[»] chr1 (5 HSPs)
chr1 (395-497)||(12252506-12252608)
chr1 (430-490)||(18172642-18172701)
chr1 (395-482)||(18547889-18547976)
chr1 (432-480)||(2981105-2981153)
chr1 (429-483)||(29101796-29101850)
[»] chr4 (3 HSPs)
chr4 (430-504)||(4442126-4442200)
chr4 (410-476)||(10266447-10266511)
chr4 (410-476)||(10285472-10285536)
[»] chr8 (2 HSPs)
chr8 (395-503)||(11405858-11405965)
chr8 (430-482)||(26588155-26588207)
[»] chr6 (3 HSPs)
chr6 (430-482)||(7732693-7732745)
chr6 (432-480)||(24585721-24585769)
chr6 (432-482)||(5090494-5090544)
[»] chr5 (2 HSPs)
chr5 (430-482)||(14460178-14460230)
chr5 (430-477)||(29286097-29286143)


Alignment Details
Target: chr3 (Bit Score: 455; Significance: 0; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 1 - 511
Target Start/End: Original strand, 290284 - 290794
Alignment:
Q  1 acaatgttttggatttatcaaaatctacttggtcatacaaagttgggatgaatggtgtggctagaaagttctatgatcccaaatctaccaatttagttcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  290284 acaatgttttggatttatcaaaatctacttggtcatacaaagttgggatgaatggtgtggctagaaagttctatgatcccaaatctaccaatgtagttcc 290383  T
Q  101 atggcaaacacgtaatgtttctacaggagtaccaatgacttggtacaagaccactttcaagacccctgaaggttcagaccttgtagtcctggatttgata 200  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  290384 atggcaaacacgtaatgtttctatagaaggaccaatgacttggtacaagaccactttcaagacccctgaaggttcaaaccttgtagtcctggatttgata 290483  T
Q  201 ggtcttcaaagaggaaaagcatgggttaacggtcaaagtatcggaaggtattggattggtgaaaattcatcttttagattttacgcagttccaaggccat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  290484 ggtcttcaaagaggaaaagcatgggttaacggtcaaagtatcggaaggtattggattggtgaaaattcatcttttaggttttacgcagtgccaaggccat 290583  T
Q  301 tcttaaataaagatgtaaacacgttggtcttgtttgaagaactgggtctaggtgaaggccctttcaatgtgtctgtcaacatagtcagcaatgaatccag 400  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||     
T  290584 tcttaaataaagatgtaaacacgttggtcttgtttgaagagctgggtctaggtgaaggccctttcaatgtgtctgtcgacatagttagcaacgaatccaa 290683  T
Q  401 aaattccgttaagtgggatcaaggttgcatatcataaatatttatacaaaaatatataaatttataaccaataaaatgatgacaccgttatctttaagaa 500  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  290684 aaatttcgttaagtgggatcaaggttgcatatcatgaatatttatacaaaaatatataaatttataaccaataaaatgatgacaccgttatctttaagaa 290783  T
Q  501 aaataattaga 511  Q
    |||||||||||    
T  290784 aaataattaga 290794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 279839 - 280092
Alignment:
Q  1 acaatgttttggatttatcaaaatctacttggtcatacaaagttgggatgaatggtgtggctagaaagttctatgatcccaaatctaccaatttagttcc 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || ||| ||||||||||||||||||| | |||| |  |||||     
T  279839 acaatgttttggatttatcaaaatctacttggtcgtacaaagttgggataaatggtatgactaaaaagttctatgatcccaaaaccaccattggagttca 279938  T
Q  101 atggcaaacacgtaatgtttctacaggagtaccaatgacttggtacaagaccactttcaagacccctgaaggttcagaccttgtagtcctggatttgata 200  Q
    |||| |||||  ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| ||| || |||  |||||| |||| ||||||    
T  279939 atggaaaacaaataatgtttctataggagtaccaatgacttggtataagactactttcaagacccctgatggtacaaaccccgtagtcttggacttgata 280038  T
Q  201 ggtcttcaaagaggaaaagcatgggttaacggtcaaagtatcggaaggtattgg 254  Q
    || ||||| | |||| ||||||||||||| ||||||||||| ||||||||||||    
T  280039 ggccttcagaaaggagaagcatgggttaatggtcaaagtattggaaggtattgg 280092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 291 - 377
Target Start/End: Original strand, 280210 - 280296
Alignment:
Q  291 ccaaggccattcttaaataaagatgtaaacacgttggtcttgtttgaagaactgggtctaggtgaaggccctttcaatgtgtctgtc 377  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||| ||| ||||| | | || |  ||||||||||| |||||||    
T  280210 ccaaggtcattcttaaataatgatgtaaacacgttggttttgtttgaggaaatgggttttgatgcaacccctttcaatgcgtctgtc 280296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 8354176 - 8354228
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaatgatga 482  Q
    ||||||||||||||| |||||||||||||||   ||||||| |||||||||||    
T  8354176 tatcataaatatttaaacaaaaatatataaaaccataaccattaaaatgatga 8354228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 321; Significance: 0; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 491
Target Start/End: Original strand, 24532011 - 24532497
Alignment:
Q  1 acaatgttttggatttatcaaaatctacttggtcatacaaagttgggatgaatggtgtggctagaaagttctatgatcccaaatctaccaatttagttcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||  ||||||    
T  24532011 acaatgttttggatttatcaaaatctacttggtcatacaaagttgggatgaatggtatggctagaaagttctatgatcccaaatcta---atggagttcc 24532107  T
Q  101 atggcaaacacgtaatgtttctacaggagtaccaatgacttggtacaagaccactttcaagacccctgaaggttcagaccttgtagtcctggatttgata 200  Q
    ||||  | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  24532108 atggataccacgtaatgtttctataggagtaccaatgacttggtacaagaccactttcaagacccctgaagggtcaaaccttgtagtcctggatttgata 24532207  T
Q  201 ggtcttcaaagaggaaaagcatgggttaacggtcaaagtatcggaaggtattggattggtgaaaattcatcttttagattttacgcagttccaaggccat 300  Q
    || |||||||||||||||||||||||||| |||||| |||| ||||||||| || |||||||||||||||||||||| | ||||||||| ||||||||||    
T  24532208 ggccttcaaagaggaaaagcatgggttaatggtcaatgtattggaaggtatcggcttggtgaaaattcatcttttaggtattacgcagtgccaaggccat 24532307  T
Q  301 tcttaaataaagatgtaaacacgttggtcttgtttgaagaactgggtctaggtgaaggccctttcaatgtgtctgtcaacatagtcagcaatgaatccag 400  Q
    |||| ||||||||||||||||| |||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||| ||||| ||||||  ||||||||    
T  24532308 tctttaataaagatgtaaacacattggtcttgtttgaggaattgggtctgggtaaaggccctttcaatgtgtctgtcgacataatcagcatcgaatccag 24532407  T
Q  401 aaattccgttaagtgggatcaaggttgcatatcataaatatttatacaaaaatatataaatttataaccaataaaatgatgacaccgttat 491  Q
    |||||  |||||||||||||||||||||  ||||| |||||||||||| ||||| ||||||| ||||||||| ||||||||||||| ||||    
T  24532408 aaattttgttaagtgggatcaaggttgctcatcatgaatatttatacagaaatacataaattcataaccaat-aaatgatgacaccattat 24532497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 1 - 511
Target Start/End: Original strand, 24525339 - 24525846
Alignment:
Q  1 acaatgttttggatttatcaaaatctacttggtcatacaaagttgggatgaatggtgtggctagaaagttctatgatcccaaatctaccaatttagttcc 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||| |||||   ||  ||||||    
T  24525339 acaatgttttggatttatcaaaatctacttggtcgtacaaagttgggatgaatggtatggctagaaagttctaagatcccagatcta---atggagttcc 24525435  T
Q  101 atggcaaacacgtaatgtttctacaggagtaccaatgacttggtacaagaccactttcaagacccctgaaggttcagaccttgtagtcctggatttgata 200  Q
    ||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  24525436 atggataccacgtaatgtttctacaggagtaccaatgacttggtacaagaccactttcaagacccctaaagggtcaaaccttgtagtcctggatttgata 24525535  T
Q  201 ggtcttcaaagaggaaaagcatgggttaacggtcaaagtatcggaaggtattggattggtgaaaattcatcttttagattttacgcagttccaaggccat 300  Q
    || |||||||||||||||||||||||||| ||||||||||| |||||||||  | |||||||||||||||||||||| | ||||||||| ||||||||||    
T  24525536 ggccttcaaagaggaaaagcatgggttaatggtcaaagtattggaaggtatcagcttggtgaaaattcatcttttaggtattacgcagtgccaaggccat 24525635  T
Q  301 tcttaaataaagatgtaaacacgttggtcttgtttgaagaactgggtctaggtgaaggccctttcaatgtgtctgtcaacatagtcagcaatgaatccag 400  Q
    |||| ||||||||||||||||| |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||  ||||||||    
T  24525636 tctttaataaagatgtaaacacattggtcttgtttgaggaattgggtctgggtgaaggccctttcaatgtgtctgtcgacataatcagcatcgaatccag 24525735  T
Q  401 aaattccgttaagtgggatcaaggttgcatatcataaatatttatacaaaa-atatataaatttataaccaataaaatgatgacaccgttatctttaaga 499  Q
    |||||  |||||||||||||||||||||  ||||| |||||||||| |||| ||| ||||||| ||||||||| ||||||||||||| |||| | || |     
T  24525736 aaattttgttaagtgggatcaaggttgctcatcatgaatatttataaaaaatatacataaattcataaccaat-aaatgatgacaccattatgtctatgc 24525834  T
Q  500 aaaataattaga 511  Q
    ||||||||||||    
T  24525835 aaaataattaga 24525846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 430 - 484
Target Start/End: Complemental strand, 42436504 - 42436450
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaatgatgaca 484  Q
    |||||||||||||| || |||||||| |||||||||||| |||||||||||||||    
T  42436504 tatcataaatatttctagaaaaatatgtaaatttataacaaataaaatgatgaca 42436450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 1980040 - 1979988
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaatgatga 482  Q
    ||||||||||||||| ||||||||||||||| | ||||||| |||||||||||    
T  1980040 tatcataaatatttaaacaaaaatatataaaatcataaccattaaaatgatga 1979988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 4789262 - 4789314
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaatgatga 482  Q
    ||||||||||||||| |||||||||||||||   ||||||| |||||||||||    
T  4789262 tatcataaatatttaaacaaaaatatataaaaccataaccattaaaatgatga 4789314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 16107393 - 16107441
Alignment:
Q  432 tcataaatatttatacaaaaatatataaatttataaccaataaaatgat 480  Q
    |||||||||||||||||||||||||||||   ||||||| |||||||||    
T  16107393 tcataaatatttatacaaaaatatataaaaccataaccattaaaatgat 16107441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 477
Target Start/End: Complemental strand, 106512 - 106466
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaat 477  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  106512 tatcttaaatatttatacaaaa-tatataaatttataactaataaaat 106466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 460
Target Start/End: Original strand, 16549969 - 16549999
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaa 460  Q
    |||||||||||||||||||||||||||||||    
T  16549969 tatcataaatatttatacaaaaatatataaa 16549999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 491
Target Start/End: Original strand, 3829243 - 3829304
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaatgatgacaccgttat 491  Q
    ||||||||||| || |||||||| || |||||| ||||| |||||||| |||||||| ||||    
T  3829243 tatcataaatagttttacaaaaacatttaaattcataacaaataaaattatgacaccattat 3829304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 497
Target Start/End: Complemental strand, 6015876 - 6015774
Alignment:
Q  395 atccagaaattccgttaagtgggatcaaggttgcatatcataaatatttatacaaaaatatataaatttataaccaataaaatgatgacaccgttatctt 494  Q
    ||||||||||| |  |||||||| ||||  |||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| |    
T  6015876 atccagaaatttcaataagtggggtcaaaattgtttatcataaatatttatacaaaaatatataaatttataaccaataaaacgatgacatcattatcat 6015777  T
Q  495 taa 497  Q
    |||    
T  6015776 taa 6015774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 477
Target Start/End: Complemental strand, 13316596 - 13316515
Alignment:
Q  395 atccagaaattccgttaagtgggatcaaggttgcatatcataaatatttatacaaaaatatataaatttataaccaataaaat 477  Q
    ||||||||||| |  |||||||| ||||  |||  |||| ||||||||||||||||| |||| ||||||||||| ||||||||    
T  13316596 atccagaaatttcaataagtggggtcaatattgtttatcttaaatatttatacaaaa-tatacaaatttataactaataaaat 13316515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 475
Target Start/End: Original strand, 17257432 - 17257476
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaa 475  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||||    
T  17257432 tatcataaatgtttata-aaaaatatataaatttataactaataaa 17257476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 497
Target Start/End: Complemental strand, 12252608 - 12252506
Alignment:
Q  395 atccagaaattccgttaagtgggatcaaggttgcatatcataaatatttatacaaaaatatataaatttataaccaataaaatgatgacaccgttatctt 494  Q
    ||||||||||| |  |||||||| ||||  |||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| |    
T  12252608 atccagaaatttcaataagtggggtcaaaattgtttatcataaatatttatacaaaaatatataaatttataaccaataaaacgatgacatcattatcat 12252509  T
Q  495 taa 497  Q
    |||    
T  12252508 taa 12252506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 18172701 - 18172642
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaatgatgacaccgtta 490  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||| || |||| |||||    
T  18172701 tatcaaaaatatttatacaaaa-tatataaatttataaccaataaaaagaagacatcgtta 18172642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 18547889 - 18547976
Alignment:
Q  395 atccagaaattccgttaagtgggatcaaggttgcatatcataaatatttatacaaaaatatataaatttataaccaataaaatgatga 482  Q
    ||||||||||| | | ||||||| ||||| | |  ||||||||||||||| |||||||||||||||   ||||||| |||||||||||    
T  18547889 atccagaaatttcataaagtggggtcaagatcgtttatcataaatatttaaacaaaaatatataaaaccataaccattaaaatgatga 18547976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 2981153 - 2981105
Alignment:
Q  432 tcataaatatttatacaaaaatatataaatttataaccaataaaatgat 480  Q
    |||||||||||||||||||||||||||||   ||||||| |||||||||    
T  2981153 tcataaatatttatacaaaaatatataaaaccataaccattaaaatgat 2981105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 483
Target Start/End: Original strand, 29101796 - 29101850
Alignment:
Q  429 atatcataaatatttatacaaaaatatataaatttataaccaataaaatgatgac 483  Q
    |||| ||||||||| ||| ||| |||||||||||||||| | |||||||||||||    
T  29101796 atattataaatattaataaaaatatatataaatttataaacgataaaatgatgac 29101850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 430 - 504
Target Start/End: Original strand, 4442126 - 4442200
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaatgatgacaccgttatctttaagaaaaat 504  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| ||||| ||| || | ||||| |||||||||||    
T  4442126 tatcataaatatttaaacaaaaaaatataaatctataaccaaaaaaataatggcatcattatcattaagaaaaat 4442200  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 476
Target Start/End: Original strand, 10266447 - 10266511
Alignment:
Q  410 taagtgggatcaaggttgcatatcataaatatttatacaaaaatatataaatttataaccaataaaa 476  Q
    |||||||||||||| | |  ||||||||||||||||  ||||| || ||||||||||||||||||||    
T  10266447 taagtgggatcaagatcgtttatcataaatatttat--aaaaacatttaaatttataaccaataaaa 10266511  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 476
Target Start/End: Original strand, 10285472 - 10285536
Alignment:
Q  410 taagtgggatcaaggttgcatatcataaatatttatacaaaaatatataaatttataaccaataaaa 476  Q
    |||||||||||||| | |  ||||||||||||||||  |||||||| |||||| |||||||||||||    
T  10285472 taagtgggatcaagatcgtttatcataaatatttat--aaaaatatttaaattcataaccaataaaa 10285536  T

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Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 503
Target Start/End: Complemental strand, 11405965 - 11405858
Alignment:
Q  395 atccagaaattccgttaagtgggatcaaggttgcatatcataaatatttatacaaaaatatataaatttataaccaataaaatgatgacaccgttatctt 494  Q
    ||||||||||| |  |||||||| |||| |||   |||| ||||||||| || |||||||| |||||||||||| ||||||||||||||| | ||||| |    
T  11405965 atccagaaatttcaataagtggggtcaaagttatttatcttaaatatttcta-aaaaatatgtaaatttataacaaataaaatgatgacatcattatcat 11405867  T
Q  495 taagaaaaa 503  Q
    ||| |||||    
T  11405866 taacaaaaa 11405858  T

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Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 26588155 - 26588207
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaatgatga 482  Q
    ||||||||||||||| ||||||||||||||| | ||||||| |||||||||||    
T  26588155 tatcataaatatttaaacaaaaatatataaaatcataaccattaaaatgatga 26588207  T

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Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 7732693 - 7732745
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaatgatga 482  Q
    ||||||||||||||| ||||||||||||||| | ||||||| |||||||||||    
T  7732693 tatcataaatatttaaacaaaaatatataaaatcataaccattaaaatgatga 7732745  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 24585721 - 24585769
Alignment:
Q  432 tcataaatatttatacaaaaatatataaatttataaccaataaaatgat 480  Q
    |||||||||||||||||||||||||||||   ||||||| |||||||||    
T  24585721 tcataaatatttatacaaaaatatataaaaccataaccattaaaatgat 24585769  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 482
Target Start/End: Original strand, 5090494 - 5090544
Alignment:
Q  432 tcataaatatttatacaaaaatatataaatttataaccaataaaatgatga 482  Q
    |||||||||||| ||||||||| ||| |||| ||||| |||||||||||||    
T  5090494 tcataaatatttttacaaaaatctatgaattcataacaaataaaatgatga 5090544  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 14460178 - 14460230
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaatgatga 482  Q
    ||||||||||||||| |||||||||||||||   ||||||| |||||||||||    
T  14460178 tatcataaatatttaaacaaaaatatataaaaccataaccattaaaatgatga 14460230  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 477
Target Start/End: Original strand, 29286097 - 29286143
Alignment:
Q  430 tatcataaatatttatacaaaaatatataaatttataaccaataaaat 477  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  29286097 tatcttaaatatttatacaaaa-tatataaatttataactaataaaat 29286143  T

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