View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9682_low_24 (Length: 246)
Name: NF9682_low_24
Description: NF9682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9682_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 32266275 - 32266501
Alignment:
| Q |
15 |
tattcatcatccctgatttcttaaatatagttgttacattgttattgtatttgcttctacaatcatcaaatccagatttatctgcttccaccttaggcct |
114 |
Q |
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| T |
32266275 |
tattcatcatccctgatttcttaaatatagttgttacattgttattgtatttgcttctacaatcatcaaatccagatttatctgcttccaccttaggcct |
32266374 |
T |
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| Q |
115 |
cttgaattcatagtttggaacacttgaatctacaaatttgattttctttgaaccatatctgaaatccctcgaatctgaattattcgaaacaccaccaatc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |
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| T |
32266375 |
cttgaattcatagtttggaacacttgaatctacaaatttgattttctttgaaccatatctgaaatccctcaaatctgaattattcgaaa---caccaatc |
32266471 |
T |
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| Q |
215 |
ccaaccattttcagcttcctttgcttctcc |
244 |
Q |
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|||||||||||||||||| ||| ||||||| |
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| T |
32266472 |
ccaaccattttcagcttctttttcttctcc |
32266501 |
T |
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