View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9682_low_29 (Length: 230)

Name: NF9682_low_29
Description: NF9682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9682_low_29
NF9682_low_29
[»] chr3 (74 HSPs)
chr3 (67-155)||(7867598-7867686)
chr3 (62-155)||(31326797-31326890)
chr3 (62-154)||(981559-981651)
chr3 (62-155)||(1901815-1901908)
chr3 (62-155)||(1911261-1911354)
chr3 (62-155)||(25959431-25959524)
chr3 (62-155)||(32795925-32796018)
chr3 (68-155)||(34607808-34607895)
chr3 (157-219)||(982532-982594)
chr3 (62-152)||(41717352-41717442)
chr3 (73-154)||(462291-462372)
chr3 (61-155)||(44593054-44593148)
chr3 (62-151)||(29800442-29800531)
chr3 (73-155)||(50294013-50294095)
chr3 (21-71)||(32656005-32656055)
chr3 (62-155)||(1295421-1295514)
chr3 (62-155)||(32981010-32981103)
chr3 (68-156)||(43409253-43409341)
chr3 (68-155)||(35987336-35987424)
chr3 (21-71)||(32981112-32981162)
chr3 (21-71)||(36869828-36869878)
chr3 (21-71)||(45150257-45150307)
chr3 (61-118)||(275314-275371)
chr3 (23-68)||(25959536-25959581)
chr3 (62-151)||(46473217-46473306)
chr3 (19-71)||(44334792-44334844)
chr3 (19-66)||(622456-622503)
chr3 (21-71)||(20215978-20216028)
chr3 (62-155)||(27198042-27198136)
chr3 (62-149)||(32457648-32457737)
chr3 (21-71)||(32795860-32795910)
chr3 (26-104)||(41369632-41369710)
chr3 (21-71)||(43333661-43333711)
chr3 (18-71)||(981499-981552)
chr3 (21-62)||(1901926-1901967)
chr3 (21-62)||(1911372-1911413)
chr3 (21-70)||(8868902-8868951)
chr3 (76-149)||(22153967-22154040)
chr3 (61-149)||(28300541-28300629)
chr3 (62-146)||(3483208-3483292)
chr3 (62-126)||(32656064-32656128)
chr3 (19-71)||(43900748-43900800)
chr3 (23-71)||(51672895-51672943)
chr3 (62-156)||(33971972-33972067)
chr3 (21-68)||(40785693-40785740)
chr3 (31-62)||(42962336-42962367)
chr3 (21-71)||(275256-275306)
chr3 (62-156)||(1031315-1031409)
chr3 (21-67)||(3957859-3957905)
chr3 (20-66)||(16295493-16295539)
chr3 (62-104)||(34271428-34271470)
chr3 (21-71)||(35376542-35376592)
chr3 (21-71)||(41717480-41717530)
chr3 (21-62)||(7214-7255)
chr3 (21-54)||(462409-462442)
chr3 (74-147)||(11173551-11173624)
chr3 (31-68)||(29917017-29917054)
chr3 (31-68)||(29966170-29966207)
chr3 (26-71)||(31176431-31176476)
chr3 (20-53)||(31300831-31300864)
chr3 (26-71)||(47276261-47276306)
chr3 (31-68)||(52485513-52485550)
chr3 (62-118)||(7140-7196)
chr3 (23-71)||(1295364-1295412)
chr3 (19-71)||(22153892-22153944)
chr3 (32-68)||(26452716-26452752)
chr3 (73-149)||(29706003-29706079)
chr3 (21-64)||(30567957-30568001)
chr3 (20-56)||(41877717-41877753)
chr3 (31-71)||(45293019-45293059)
chr3 (21-73)||(47988474-47988526)
chr3 (21-73)||(47997761-47997813)
chr3 (21-73)||(48007048-48007100)
chr3 (32-68)||(52100302-52100338)
[»] chr7 (61 HSPs)
chr7 (68-155)||(9031302-9031389)
chr7 (62-155)||(2469781-2469874)
chr7 (62-155)||(25940556-25940649)
chr7 (62-156)||(18157073-18157167)
chr7 (62-155)||(27688726-27688819)
chr7 (61-153)||(43107700-43107792)
chr7 (62-155)||(6655506-6655599)
chr7 (67-155)||(30941271-30941359)
chr7 (67-143)||(43444722-43444798)
chr7 (79-155)||(35072134-35072210)
chr7 (67-155)||(35098476-35098564)
chr7 (89-155)||(43079518-43079584)
chr7 (20-102)||(30538655-30538740)
chr7 (37-128)||(29034147-29034240)
chr7 (21-71)||(40693519-40693569)
chr7 (21-71)||(43107640-43107690)
chr7 (21-73)||(26123397-26123449)
chr7 (21-73)||(45154529-45154581)
chr7 (23-135)||(16567348-16567462)
chr7 (23-135)||(16598200-16598314)
chr7 (62-149)||(46651761-46651848)
chr7 (21-71)||(4678093-4678143)
chr7 (26-151)||(36186787-36186912)
chr7 (21-114)||(36920833-36920926)
chr7 (26-71)||(38023415-38023460)
chr7 (31-68)||(47954095-47954132)
chr7 (62-149)||(5978668-5978755)
chr7 (21-61)||(24267648-24267688)
chr7 (19-71)||(31364875-31364927)
chr7 (23-71)||(33056650-33056698)
chr7 (31-71)||(43444664-43444704)
chr7 (21-68)||(4971320-4971367)
chr7 (21-67)||(17002366-17002413)
chr7 (23-66)||(25332494-25332537)
chr7 (21-149)||(33212072-33212202)
chr7 (79-149)||(12141990-12142060)
chr7 (20-154)||(28548124-28548263)
chr7 (21-71)||(34304669-34304719)
chr7 (21-71)||(40949891-40949941)
chr7 (21-71)||(42640873-42640923)
chr7 (26-71)||(10619690-10619735)
chr7 (31-68)||(29855267-29855304)
chr7 (31-68)||(31445358-31445395)
chr7 (31-68)||(35098697-35098734)
chr7 (21-54)||(35098790-35098823)
chr7 (74-155)||(38023315-38023396)
chr7 (26-71)||(42467239-42467284)
chr7 (31-68)||(42584843-42584880)
chr7 (26-71)||(47644740-47644785)
chr7 (20-56)||(5378656-5378692)
chr7 (62-149)||(7390669-7390756)
chr7 (123-155)||(8061635-8061667)
chr7 (23-71)||(21588916-21588964)
chr7 (94-154)||(22692201-22692261)
chr7 (31-104)||(37856121-37856196)
chr7 (26-66)||(38990136-38990176)
chr7 (32-68)||(41989736-41989772)
chr7 (21-73)||(44564712-44564764)
chr7 (38-115)||(44817753-44817832)
chr7 (27-71)||(47905107-47905151)
chr7 (20-56)||(48522185-48522221)
[»] chr5 (68 HSPs)
chr5 (62-156)||(9636046-9636140)
chr5 (80-155)||(24792559-24792634)
chr5 (62-155)||(36581356-36581449)
chr5 (61-156)||(13734248-13734343)
chr5 (74-155)||(91316-91397)
chr5 (62-155)||(6865676-6865769)
chr5 (62-155)||(15639474-15639567)
chr5 (62-156)||(582757-582851)
chr5 (60-155)||(28904079-28904178)
chr5 (60-155)||(28940474-28940573)
chr5 (74-156)||(36624419-36624501)
chr5 (85-156)||(7144687-7144758)
chr5 (21-149)||(2117535-2117665)
chr5 (62-156)||(19437346-19437440)
chr5 (62-156)||(39595363-39595457)
chr5 (22-67)||(26627361-26627406)
chr5 (110-155)||(32732005-32732050)
chr5 (62-149)||(34381101-34381188)
chr5 (21-71)||(91245-91295)
chr5 (21-115)||(3770953-3771047)
chr5 (21-71)||(6046343-6046393)
chr5 (19-68)||(7287183-7287233)
chr5 (21-71)||(11880978-11881028)
chr5 (21-71)||(20040818-20040868)
chr5 (62-156)||(26627419-26627513)
chr5 (21-71)||(28904021-28904071)
chr5 (21-71)||(28940416-28940466)
chr5 (31-68)||(4088484-4088521)
chr5 (62-155)||(5698217-5698310)
chr5 (31-68)||(16690540-16690577)
chr5 (26-71)||(23991266-23991311)
chr5 (62-155)||(26626708-26626801)
chr5 (21-66)||(32873145-32873190)
chr5 (31-149)||(33567134-33567254)
chr5 (62-155)||(38387800-38387892)
chr5 (23-71)||(5698319-5698367)
chr5 (31-71)||(6865778-6865818)
chr5 (123-155)||(20040924-20040956)
chr5 (23-71)||(36624350-36624398)
chr5 (62-157)||(3722963-3723058)
chr5 (21-68)||(26626811-26626858)
chr5 (26-146)||(39458692-39458814)
chr5 (21-71)||(17063895-17063945)
chr5 (19-68)||(19521997-19522047)
chr5 (79-156)||(23991337-23991415)
chr5 (21-71)||(26660402-26660452)
chr5 (21-71)||(26931994-26932044)
chr5 (21-71)||(29803255-29803305)
chr5 (19-68)||(33037547-33037597)
chr5 (21-71)||(36572721-36572771)
chr5 (21-71)||(36713169-36713219)
chr5 (21-71)||(38690957-38691007)
chr5 (21-104)||(39788660-39788747)
chr5 (62-151)||(2863638-2863727)
chr5 (21-62)||(15639415-15639456)
chr5 (19-149)||(18638736-18638868)
chr5 (19-56)||(21023326-21023363)
chr5 (31-68)||(22098296-22098333)
chr5 (21-62)||(31329126-31329167)
chr5 (20-56)||(3031863-3031899)
chr5 (62-149)||(5130272-5130360)
chr5 (20-56)||(5386099-5386135)
chr5 (22-62)||(9636158-9636198)
chr5 (68-151)||(12612909-12612993)
chr5 (26-66)||(33626634-33626674)
chr5 (31-67)||(38293353-38293389)
chr5 (19-71)||(39840700-39840752)
chr5 (21-68)||(40364598-40364646)
[»] chr8 (51 HSPs)
chr8 (61-155)||(36740400-36740494)
chr8 (62-156)||(1796572-1796666)
chr8 (87-152)||(5782902-5782967)
chr8 (68-155)||(6005039-6005126)
chr8 (62-156)||(32725670-32725764)
chr8 (25-155)||(38174137-38174270)
chr8 (62-155)||(12045542-12045635)
chr8 (68-155)||(42443201-42443288)
chr8 (21-71)||(6849252-6849302)
chr8 (21-71)||(42443134-42443184)
chr8 (76-156)||(37392015-37392096)
chr8 (19-71)||(3756929-3756981)
chr8 (21-71)||(6004974-6005024)
chr8 (21-116)||(9550351-9550448)
chr8 (62-151)||(9895095-9895185)
chr8 (21-62)||(12045653-12045694)
chr8 (26-71)||(14548814-14548859)
chr8 (26-71)||(32725771-32725816)
chr8 (62-155)||(44380503-44380596)
chr8 (21-115)||(45238578-45238674)
chr8 (111-155)||(69515-69559)
chr8 (73-149)||(23258132-23258208)
chr8 (23-116)||(28623053-28623150)
chr8 (62-149)||(28927770-28927857)
chr8 (23-66)||(5642386-5642429)
chr8 (23-66)||(5644327-5644370)
chr8 (19-68)||(6440109-6440159)
chr8 (97-156)||(20853041-20853102)
chr8 (62-104)||(28570347-28570389)
chr8 (62-104)||(28577940-28577982)
chr8 (20-62)||(29509295-29509337)
chr8 (21-71)||(37562132-37562182)
chr8 (21-62)||(40528778-40528820)
chr8 (19-56)||(6105442-6105479)
chr8 (127-156)||(9314566-9314595)
chr8 (67-116)||(10344422-10344471)
chr8 (26-71)||(12490763-12490808)
chr8 (21-62)||(12659082-12659123)
chr8 (31-68)||(23754700-23754737)
chr8 (31-68)||(25830239-25830276)
chr8 (31-68)||(35067201-35067238)
chr8 (67-104)||(42996556-42996593)
chr8 (31-68)||(43285956-43285993)
chr8 (31-68)||(43715915-43715952)
chr8 (61-149)||(21273605-21273693)
chr8 (20-56)||(21649174-21649210)
chr8 (32-68)||(24798351-24798387)
chr8 (26-62)||(29910212-29910248)
chr8 (32-64)||(29991454-29991486)
chr8 (23-71)||(39021434-39021482)
chr8 (23-71)||(40459753-40459801)
[»] chr1 (75 HSPs)
chr1 (61-155)||(49621449-49621543)
chr1 (62-155)||(25061822-25061915)
chr1 (62-154)||(51339590-51339682)
chr1 (62-155)||(48872468-48872561)
chr1 (62-155)||(50527946-50528039)
chr1 (62-156)||(4604618-4604712)
chr1 (62-155)||(27352719-27352812)
chr1 (62-147)||(30530471-30530556)
chr1 (62-155)||(44730733-44730826)
chr1 (68-155)||(36930645-36930732)
chr1 (62-156)||(43611970-43612064)
chr1 (67-152)||(32821729-32821814)
chr1 (62-152)||(25098683-25098770)
chr1 (60-155)||(16658526-16658625)
chr1 (61-155)||(51172196-51172290)
chr1 (62-156)||(16987536-16987631)
chr1 (62-155)||(30687141-30687234)
chr1 (62-155)||(40595943-40596036)
chr1 (21-71)||(48872409-48872459)
chr1 (62-151)||(11460883-11460972)
chr1 (62-155)||(38019392-38019484)
chr1 (61-155)||(40605309-40605404)
chr1 (62-155)||(21255673-21255767)
chr1 (21-66)||(30530570-30530615)
chr1 (68-156)||(35043607-35043696)
chr1 (19-71)||(33422210-33422262)
chr1 (23-71)||(36930745-36930793)
chr1 (19-71)||(52417559-52417611)
chr1 (85-152)||(45349989-45350056)
chr1 (21-71)||(16658468-16658518)
chr1 (62-155)||(17526509-17526603)
chr1 (21-71)||(25988975-25989025)
chr1 (21-71)||(30687082-30687132)
chr1 (74-155)||(42299076-42299158)
chr1 (31-68)||(9987992-9988029)
chr1 (26-108)||(15059675-15059759)
chr1 (111-151)||(5043186-5043226)
chr1 (19-71)||(44112482-44112534)
chr1 (19-71)||(44641894-44641946)
chr1 (32-68)||(47820494-47820530)
chr1 (21-56)||(9445138-9445173)
chr1 (21-68)||(12999816-12999863)
chr1 (21-68)||(21255779-21255826)
chr1 (26-65)||(32216037-32216076)
chr1 (62-149)||(34187353-34187440)
chr1 (21-68)||(34941914-34941961)
chr1 (20-71)||(39815375-39815426)
chr1 (62-116)||(8464441-8464495)
chr1 (21-71)||(12717665-12717715)
chr1 (62-104)||(14002682-14002724)
chr1 (21-71)||(25702206-25702256)
chr1 (21-71)||(29254057-29254107)
chr1 (21-66)||(33076149-33076195)
chr1 (23-61)||(38019505-38019543)
chr1 (21-71)||(44950412-44950462)
chr1 (20-66)||(47279687-47279733)
chr1 (21-71)||(48325252-48325302)
chr1 (31-68)||(12798588-12798625)
chr1 (21-62)||(25098788-25098829)
chr1 (31-68)||(30536032-30536069)
chr1 (26-71)||(35846868-35846913)
chr1 (123-152)||(51571668-51571697)
chr1 (31-68)||(52437535-52437572)
chr1 (20-56)||(6396356-6396392)
chr1 (73-149)||(7645449-7645523)
chr1 (19-71)||(8464504-8464556)
chr1 (20-56)||(24158679-24158715)
chr1 (19-71)||(24775003-24775055)
chr1 (62-149)||(25302539-25302627)
chr1 (31-71)||(40139155-40139195)
chr1 (31-71)||(40596045-40596085)
chr1 (32-64)||(44789140-44789172)
chr1 (19-71)||(45470831-45470883)
chr1 (19-71)||(49596263-49596315)
chr1 (23-71)||(51168759-51168807)
[»] chr4 (70 HSPs)
chr4 (62-155)||(46567018-46567111)
chr4 (67-151)||(12638918-12639002)
chr4 (68-156)||(28676042-28676130)
chr4 (61-151)||(16508870-16508960)
chr4 (62-155)||(54801085-54801179)
chr4 (62-156)||(33438134-33438228)
chr4 (61-156)||(40847457-40847550)
chr4 (62-152)||(26440752-26440842)
chr4 (73-155)||(55510959-55511041)
chr4 (62-155)||(37977204-37977297)
chr4 (21-71)||(42853969-42854019)
chr4 (21-71)||(18874913-18874963)
chr4 (62-156)||(23094465-23094558)
chr4 (21-71)||(52456918-52456968)
chr4 (107-151)||(11997784-11997828)
chr4 (68-156)||(23836988-23837076)
chr4 (62-155)||(18874812-18874906)
chr4 (21-71)||(25725685-25725735)
chr4 (21-71)||(44272801-44272851)
chr4 (123-156)||(32621767-32621800)
chr4 (21-62)||(46566959-46567000)
chr4 (62-155)||(51389405-51389498)
chr4 (19-71)||(17363258-17363310)
chr4 (23-71)||(23094408-23094456)
chr4 (31-71)||(28676143-28676183)
chr4 (123-155)||(41010060-41010092)
chr4 (19-71)||(45274293-45274345)
chr4 (20-71)||(36081828-36081879)
chr4 (60-95)||(37380278-37380313)
chr4 (20-71)||(41170802-41170852)
chr4 (123-154)||(48783944-48783975)
chr4 (20-71)||(53781828-53781879)
chr4 (19-68)||(5622485-5622535)
chr4 (26-105)||(6239415-6239496)
chr4 (110-156)||(7795137-7795183)
chr4 (21-71)||(8455891-8455941)
chr4 (21-71)||(12241088-12241138)
chr4 (79-149)||(22071604-22071674)
chr4 (62-104)||(23690320-23690362)
chr4 (21-71)||(33820327-33820377)
chr4 (21-71)||(34027926-34027976)
chr4 (21-100)||(35580156-35580237)
chr4 (79-156)||(41609559-41609637)
chr4 (26-68)||(50608618-50608660)
chr4 (34-68)||(50721738-50721772)
chr4 (21-66)||(925058-925103)
chr4 (61-149)||(1580177-1580266)
chr4 (31-68)||(2109472-2109509)
chr4 (68-149)||(5234366-5234447)
chr4 (21-66)||(12638855-12638900)
chr4 (31-68)||(38792883-38792920)
chr4 (31-68)||(41849731-41849768)
chr4 (56-149)||(43759075-43759168)
chr4 (31-68)||(44257723-44257760)
chr4 (31-68)||(49585035-49585072)
chr4 (19-71)||(1688419-1688471)
chr4 (20-56)||(14090056-14090092)
chr4 (21-68)||(16019506-16019554)
chr4 (23-71)||(18880817-18880865)
chr4 (20-56)||(29513702-29513738)
chr4 (23-71)||(29863583-29863631)
chr4 (22-62)||(31048919-31048959)
chr4 (19-71)||(31147259-31147311)
chr4 (16-56)||(31275171-31275211)
chr4 (21-68)||(36123453-36123501)
chr4 (26-62)||(40308476-40308512)
chr4 (24-68)||(42490942-42490986)
chr4 (21-73)||(46911928-46911980)
chr4 (20-56)||(51224844-51224880)
chr4 (20-56)||(56025285-56025321)
[»] scaffold0166 (1 HSPs)
scaffold0166 (80-155)||(34942-35017)
[»] scaffold0002 (2 HSPs)
scaffold0002 (61-155)||(440806-440900)
scaffold0002 (21-56)||(440748-440783)
[»] chr6 (34 HSPs)
chr6 (62-155)||(21443777-21443870)
chr6 (68-156)||(8173200-8173288)
chr6 (62-155)||(32729978-32730071)
chr6 (62-155)||(16533148-16533242)
chr6 (21-71)||(12044362-12044412)
chr6 (23-68)||(23653887-23653932)
chr6 (21-102)||(3089003-3089086)
chr6 (21-71)||(9188935-9188985)
chr6 (23-68)||(8173306-8173351)
chr6 (87-156)||(12187060-12187129)
chr6 (26-71)||(16743257-16743302)
chr6 (123-156)||(25567381-25567414)
chr6 (26-71)||(32644647-32644692)
chr6 (19-71)||(2333393-2333445)
chr6 (18-62)||(28965840-28965884)
chr6 (31-70)||(12177606-12177645)
chr6 (21-68)||(20712096-20712143)
chr6 (62-156)||(34490436-34490531)
chr6 (19-68)||(5080561-5080611)
chr6 (74-155)||(25561831-25561910)
chr6 (74-155)||(26101345-26101424)
chr6 (26-71)||(11742973-11743018)
chr6 (31-68)||(13423009-13423046)
chr6 (21-62)||(14094941-14094982)
chr6 (19-56)||(19789082-19789119)
chr6 (21-62)||(32729919-32729960)
chr6 (21-70)||(34490377-34490426)
chr6 (26-62)||(9200143-9200179)
chr6 (24-104)||(12427185-12427265)
chr6 (32-68)||(16337916-16337952)
chr6 (23-71)||(23633314-23633362)
chr6 (20-56)||(25924870-25924906)
chr6 (61-149)||(32853039-32853127)
chr6 (32-64)||(33421802-33421834)
[»] chr2 (61 HSPs)
chr2 (62-153)||(5167633-5167724)
chr2 (62-155)||(40951279-40951372)
chr2 (61-156)||(4842407-4842502)
chr2 (73-152)||(30856907-30856986)
chr2 (61-146)||(13553231-13553316)
chr2 (73-153)||(19668078-19668158)
chr2 (79-155)||(15283138-15283214)
chr2 (80-155)||(21805675-21805750)
chr2 (62-148)||(10288241-10288327)
chr2 (62-155)||(36763408-36763502)
chr2 (19-71)||(7497982-7498034)
chr2 (21-69)||(30856837-30856885)
chr2 (74-146)||(35792354-35792426)
chr2 (23-71)||(36763515-36763563)
chr2 (21-68)||(23358573-23358620)
chr2 (62-156)||(37631254-37631349)
chr2 (110-156)||(305856-305902)
chr2 (21-71)||(8555282-8555332)
chr2 (21-66)||(3932988-3933033)
chr2 (21-62)||(4842520-4842561)
chr2 (114-151)||(13553310-13553347)
chr2 (79-156)||(32128236-32128312)
chr2 (19-71)||(546376-546428)
chr2 (21-68)||(1352418-1352466)
chr2 (23-71)||(8352867-8352915)
chr2 (123-155)||(19637377-19637409)
chr2 (123-155)||(19835970-19836002)
chr2 (21-68)||(29449241-29449289)
chr2 (19-71)||(37631358-37631410)
chr2 (19-71)||(42665803-42665855)
chr2 (62-149)||(11164271-11164358)
chr2 (20-71)||(11728112-11728163)
chr2 (62-149)||(13711150-13711237)
chr2 (19-62)||(35965603-35965646)
chr2 (21-68)||(37966615-37966661)
chr2 (20-71)||(43514921-43514972)
chr2 (61-149)||(45515494-45515582)
chr2 (21-71)||(1052487-1052537)
chr2 (26-68)||(4263858-4263900)
chr2 (21-71)||(21805777-21805827)
chr2 (21-71)||(28165159-28165209)
chr2 (21-104)||(33296027-33296112)
chr2 (21-62)||(15283250-15283291)
chr2 (21-62)||(40951223-40951264)
chr2 (62-156)||(694358-694453)
chr2 (19-71)||(6666048-6666100)
chr2 (20-56)||(6851665-6851701)
chr2 (21-64)||(9194459-9194503)
chr2 (32-68)||(10472141-10472177)
chr2 (62-146)||(13104568-13104652)
chr2 (19-71)||(18619388-18619440)
chr2 (21-64)||(30977919-30977963)
chr2 (27-71)||(32128168-32128212)
chr2 (62-146)||(32750087-32750171)
chr2 (31-67)||(36625129-36625165)
chr2 (21-68)||(36774568-36774616)
chr2 (26-62)||(36795765-36795801)
chr2 (32-64)||(39449114-39449146)
chr2 (32-68)||(40700237-40700273)
chr2 (19-71)||(42554804-42554856)
chr2 (85-149)||(42665707-42665771)
[»] scaffold0184 (2 HSPs)
scaffold0184 (67-156)||(16482-16571)
scaffold0184 (21-71)||(16585-16635)
[»] scaffold0078 (1 HSPs)
scaffold0078 (67-156)||(56273-56362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (62-155)||(337207-337300)
[»] scaffold0115 (1 HSPs)
scaffold0115 (62-149)||(15084-15170)
[»] scaffold0018 (1 HSPs)
scaffold0018 (62-149)||(36088-36178)
[»] scaffold0241 (1 HSPs)
scaffold0241 (21-71)||(5259-5309)
[»] scaffold0522 (1 HSPs)
scaffold0522 (67-116)||(2432-2481)
[»] scaffold0036 (1 HSPs)
scaffold0036 (68-149)||(18099-18179)
[»] scaffold0172 (1 HSPs)
scaffold0172 (20-56)||(17004-17040)
[»] scaffold0076 (1 HSPs)
scaffold0076 (31-104)||(11248-11323)
[»] scaffold0020 (1 HSPs)
scaffold0020 (19-71)||(155934-155986)


Alignment Details
Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 7867686 - 7867598
Alignment:
Q  67 ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7867686 ctctcaccattgttttttaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 7867598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 31326797 - 31326890
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31326797 tttttctctctccattgtttttgaccaatgaaaagagagaaaatgaagattgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 31326890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 981559 - 981651
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgct 154  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  981559 tttttctctccccattatttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggctgtactaaatggttgttcaaatatcattgct 981651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 1901908 - 1901815
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  1901908 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatattattgctc 1901815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 1911354 - 1911261
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  1911354 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatattattgctc 1911261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 25959524 - 25959431
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||    
T  25959524 tttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaagttgtcaaataggttgtatcaaatggttgttcaaatatcattgctc 25959431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 32795925 - 32796018
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  32795925 tttttctctctccattgtttttgaccaataaaaagagagaaaatgaaagttgtcaaataggttgtaccaaatggttgttcaaatatcattgctc 32796018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 34607895 - 34607808
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  34607895 tctctccattgttttttatcaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatagttgttcaaatatcgttgctc 34607808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 982532 - 982594
Alignment:
Q  157 gcttgtaataatcggatgaattaaatttaatcacagcattttaagaattagaacatctgtgct 219  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  982532 gcttgtaataatcggatgaattaaatttaatcacaacattttaagaattagaacatctgtgct 982594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 41717352 - 41717442
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattg 152  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |||||||||||||    
T  41717352 tttttctctctccattgtttttgaccaatgaaaagagagaaaaagaagattgtcaaatagattataccaaatggttgatcaaatatcattg 41717442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 462372 - 462291
Alignment:
Q  73 ccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgct 154  Q
    ||||| ||||| | ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  462372 ccattgttttttatcaatgaaaagagagaaaagaaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgct 462291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 44593054 - 44593148
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| ||||| ||||| ||||| ||||||||||| |||||||||||||||||||||| |  |||||||||||| || |||||||||||||||||    
T  44593054 ttttttctctctccattgtttttgaccaatgaaaatagagaaaatgaaggttgtcaaaaaagttgtaccaaatgattattcaaatatcattgctc 44593148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 29800531 - 29800442
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcatt 151  Q
    |||| ||||| ||||||||||| |||||||||||||||||||| |||| || |||||||| |||||||||||  ||||||||||||||||    
T  29800531 tttttctctctccattatttttgaccaatgaaaagagagaaaaagaagattttcaaataggttgtaccaaataattgttcaaatatcatt 29800442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 155
Target Start/End: Complemental strand, 50294095 - 50294013
Alignment:
Q  73 ccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| ||||| | |||||||||||||||||| ||| |||||||||||  |||||||||||||||||| ||||||||||||||    
T  50294095 ccattgtttttgatcaatgaaaagagagaaaaagaaagttgtcaaataagttgtaccaaatggttgttaaaatatcattgctc 50294013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 32656005 - 32656055
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32656005 acaacttttagacaactttctctctcatactcacatcatatttttactctc 32656055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 1295421 - 1295514
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| | ||| ||||| ||||||||||||| |||||| |||||||||||||    ||||| |||||||||||||||||||||||||||    
T  1295421 tttttctctctctattgtttttgaccaatgaaaagatagaaaaagaaggttgtcaaaattgttgtagcaaatggttgttcaaatatcattgctc 1295514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 32981103 - 32981010
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| || ||||| ||| ||||| | ||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  32981103 tttttctctctccattgtttttgacaaatgagaagggagaagaagaaggttgtcaaaaaatttgtaccaaatggttgttcaaatatcattgctc 32981010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 43409341 - 43409253
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||||||||||||||||||  ||| |||||||||||||| ||| ||||  |||||||||||||| ||||||    
T  43409341 tctctccattgtttttgaccaatgaaaagagagaaaaaaaagattgtcaaatagattatactaaataattgttcaaatatcaatgctca 43409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 35987336 - 35987424
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgt-accaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||||||||| |||||| |||||| |||||| ||||||||||| | | ||||| | |||||| ||||||||||||||||||||    
T  35987336 tctctccattatttttgaccaataaaaagatagaaaaagaaggttgtcataaaaattgtaagcaaatgattgttcaaatatcattgctc 35987424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 32981162 - 32981112
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  32981162 acaacttttagacaactttctctctcatactcacattatattattactctc 32981112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 36869878 - 36869828
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  36869878 acaacttttagacaactttctctctcatactcacattatattcttactctc 36869828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 45150307 - 45150257
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  45150307 acaacttttagacaactttctctctcatactcacattatattcttactctc 45150257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 275314 - 275371
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaa 118  Q
    ||||| ||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  275314 ttttttctctctccattatttttgaccaatgagaagaaagaaaatgaaggttgtcaaa 275371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 25959581 - 25959536
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||    
T  25959581 aacttttagacaactttctctctcatactcacattatatttttact 25959536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 46473217 - 46473306
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcatt 151  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||   | ||||||| | |  ||||| |||||||||||||||||||||||    
T  46473217 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttgtatcaaatggttgttcaaatatcatt 46473306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 44334844 - 44334792
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  44334844 ttacaactttttgacaactttctctctcatactcacattatatttttattctc 44334792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 622503 - 622456
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatattttta 66  Q
    ||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  622503 ttacaactttttgacaactttctctctcatactcacattatattttta 622456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 20215978 - 20216028
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| |||||||||||||||||| |||||||| ||| ||||||||||||||    
T  20215978 acaatttttagacaactttctctctcatactcgcattatatttttactctc 20216028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 27198136 - 27198042
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca-aatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||   ||||||||| || || |  || |||||| ||||||||||||||||||||    
T  27198136 tttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctc 27198042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 32457737 - 32457648
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtc--aaatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||   | ||||||  ||| | |||||| ||||| |||||||||||||||    
T  32457737 tttttctctctccattatttttaaccaatgaaaagagagaaaaaagaagttgtcaaaaaaaaattgtatcaaatagttgttcaaatatca 32457648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 32795860 - 32795910
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||| ||||||| |||||||||||| ||||| ||||||||    
T  32795860 acaacttttagacaattttctctctcatactcacattatattattactctc 32795910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 41369632 - 41369710
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    |||| ||||||||||||| ||| |||||||| || || ||| |||| | ||||||||| |||||| |||||||||||||    
T  41369632 tttttgacaactttctctctcaaactcacattatcttcttattctctctattatttttgaccaatcaaaagagagaaaa 41369710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 43333711 - 43333661
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  43333711 acaactttttgacaactctctctttcatactcacattatatttttattctc 43333661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 981499 - 981552
Alignment:
Q  18 gttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||| |||||||||| | ||||||| | |||||||||||||||||    
T  981499 gttacaacttttaaacaactttctttctcatacttatatcatatttttactctc 981552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 1901967 - 1901926
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  1901967 acaacttttagacaactttctctctcatactcacattatatt 1901926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 1911413 - 1911372
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  1911413 acaacttttagacaactttctctctcatactcacattatatt 1911372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 8868902 - 8868951
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactct 70  Q
    |||||||| |||||||||||||| |||||||||||| ||||| |||||||    
T  8868902 acaactttcagacaactttctctctcatactcacattatattcttactct 8868951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 22153967 - 22154040
Alignment:
Q  76 ttatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    |||||||  |||||||||||||||| ||||||| |||||||   |  ||||||||||||||||| |||||||||    
T  22153967 ttattttggaccaatgaaaagagagcaaatgaaagttgtcattaaagttgtaccaaatggttgtacaaatatca 22154040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 28300629 - 28300541
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca-aatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||| ||||| | ||| ||||| ||||||||||||||||||||| || ||||||| || || ||||| || ||||||||||||||||||    
T  28300629 ttttttctctctctattgtttttgaccaatgaaaagagagaaaataaaagttgtcacaagag-ttgtatcatatggttgttcaaatatca 28300541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 3483208 - 3483292
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaata 146  Q
    |||| ||||| ||||||||||| | ||||||||||||||||||  || ||||||| | |  ||||| |||||| |||||||||||    
T  3483208 tttttctctctccattattttttatcaatgaaaagagagaaaaaaaaagttgtcacagatgttgtatcaaatgattgttcaaata 3483292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 32656064 - 32656128
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgt 126  Q
    |||| ||||| ||||| ||||| ||||||||||||| |||||| |||||| ||||||||| ||||    
T  32656064 tttttctctctccattgtttttgaccaatgaaaagaaagaaaaggaaggtcgtcaaataggttgt 32656128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 43900800 - 43900748
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||| ||| ||||    
T  43900800 ttacaactttttgacaactttctctctcatactcacattatattcttattctc 43900748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 51672895 - 51672943
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||| ||||    
T  51672895 aactttttgacaactttctttttcatactcacattatatttttattctc 51672943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 33971972 - 33972067
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtacc-aaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||| |||||||| ||||||||| |  |||||||||  | | |||||||| |||| ||||||||||||||||| ||||    
T  33971972 tttttctctctccattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatcattactca 33972067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 40785740 - 40785693
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||| |||||||||||| |||||||||||| ||||| |||||    
T  40785740 acaacttttaaacaactttctctctcatactcacattatattcttact 40785693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 62
Target Start/End: Original strand, 42962336 - 42962367
Alignment:
Q  31 gacaactttctctttcatactcacatcatatt 62  Q
    ||||||||||||||||||||||||||||||||    
T  42962336 gacaactttctctttcatactcacatcatatt 42962367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 275256 - 275306
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| | ||||||||||| ||||||||||| ||||| ||||||||    
T  275256 acaacttttaaaaaactttctcttccatactcacattatattcttactctc 275306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 1031409 - 1031315
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    ||||||| || ||||| ||||| |||||| | |||| ||||||  || ||||||| | |  |||||||||||  |||||||||||||||||||||    
T  1031409 ttttactttctccattgtttttgaccaataagaagaaagaaaaataaagttgtcataaaagttgtaccaaataattgttcaaatatcattgctca 1031315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 3957859 - 3957905
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttac 67  Q
    |||||||||| |||||||||||| ||||||| |||| ||||||||||    
T  3957859 acaacttttatacaactttctctctcatacttacattatatttttac 3957905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 16295493 - 16295539
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacatcatattttta 66  Q
    ||||||||||  |||||||||||| |||||||||||| |||||||||    
T  16295493 tacaacttttgtacaactttctctctcatactcacattatattttta 16295539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 34271470 - 34271428
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||    
T  34271470 tttttctctctccattatttttgaccaatgaaaagagagaaaa 34271428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 35376592 - 35376542
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| |||||||||||||||||| ||||||||| || ||||| ||||||||    
T  35376592 acaatttttagacaactttctctctcatactcatattatattcttactctc 35376542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 41717480 - 41717530
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||| ||||||| |||||||||||||||||| || |||||| ||||    
T  41717480 acaactttttgacaactctctctttcatactcacattatgtttttattctc 41717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 7255 - 7214
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    ||||||||| ||||||||||||| |||||||||||| |||||    
T  7255 acaacttttggacaactttctctctcatactcacattatatt 7214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 462442 - 462409
Alignment:
Q  21 acaacttttagacaactttctctttcatactcac 54  Q
    ||||||||||||||||||||||| ||||||||||    
T  462442 acaacttttagacaactttctctctcatactcac 462409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 11173551 - 11173624
Alignment:
Q  74 cattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatat 147  Q
    |||| ||||| ||||||||||||||||||||   | ||||||| | |  ||||| |||||||||||||||||||    
T  11173551 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatat 11173624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 29917054 - 29917017
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  29917054 gacaactttctctctcatactcacattatatttttact 29917017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 29966207 - 29966170
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  29966207 gacaactttctctctcatactcacattatatttttact 29966170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 31176476 - 31176431
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||||||||| | ||||||| || ||||||||||||||    
T  31176476 ttttagacaactttctctcttatactcagattatatttttactctc 31176431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 31300831 - 31300864
Alignment:
Q  20 tacaacttttagacaactttctctttcatactca 53  Q
    |||||||||||||||||||||||| |||||||||    
T  31300831 tacaacttttagacaactttctctctcatactca 31300864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 47276261 - 47276306
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| ||||||| |||||||||| | ||||||||||||||    
T  47276261 ttttagacaattttctctctcatactcacgttatatttttactctc 47276306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 52485513 - 52485550
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  52485513 gacaactttctctgtcatactcacattatatttttact 52485550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 7196 - 7140
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaa 118  Q
    |||| ||||| ||||| ||||| |||||| |||| |||||||| |||||||||||||    
T  7196 tttttctctctccattgtttttgaccaataaaaaaagagaaaaagaaggttgtcaaa 7140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 1295364 - 1295412
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||| ||||||||| ||| |||||||||||| ||||| ||||||||    
T  1295364 aacttttggacaactttttctctcatactcacattatattcttactctc 1295412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 22153892 - 22153944
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||| ||||| ||||||||||||| |||||||||||| ||||| ||| ||||    
T  22153892 ttacagctttttgacaactttctctctcatactcacattatattcttattctc 22153944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 26452752 - 26452716
Alignment:
Q  32 acaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||| |||||||||||| |||||||||||    
T  26452752 acaactttctctctcatactcacattatatttttact 26452716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 29706003 - 29706079
Alignment:
Q  73 ccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||| ||||| ||||||||||||||||||||   | ||||||| | |  ||||| ||||| |||||||||||||||    
T  29706003 ccattgttttttaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatca 29706079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 30568001 - 30567957
Alignment:
Q  21 acaactttta-gacaactttctctttcatactcacatcatatttt 64  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||    
T  30568001 acaacttttatgacaactttttctttcatactcatatcatatttt 30567957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 41877717 - 41877753
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  41877717 tacaactttttgacaactttctctctcatactcacat 41877753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 45293059 - 45293019
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||| |||||||||||| ||||||||| ||||    
T  45293059 gacaactttctctctcatactcacattatatttttattctc 45293019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 47988526 - 47988474
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctccc 73  Q
    ||||||||| ||||||||||||| |||||||||||| || || ||| ||||||    
T  47988526 acaactttttgacaactttctctctcatactcacattatcttcttattctccc 47988474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 47997813 - 47997761
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctccc 73  Q
    ||||||||| ||||||||||||| |||||||||||| || || ||| ||||||    
T  47997813 acaactttttgacaactttctctctcatactcacattatcttcttattctccc 47997761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 48007100 - 48007048
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctccc 73  Q
    ||||||||| ||||||||||||| |||||||||||| || || ||| ||||||    
T  48007100 acaactttttgacaactttctctctcatactcacattatcttcttattctccc 48007048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 52100302 - 52100338
Alignment:
Q  32 acaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||||||||||| |||| |||||||||||    
T  52100302 acaactttctctttcatacttacattatatttttact 52100338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 9031302 - 9031389
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9031302 tctcaccattatttttgaccaataaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 9031389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 2469781 - 2469874
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2469781 tttttctctctccattattttttaccaatgaaaatagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctc 2469874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 25940649 - 25940556
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| | ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25940649 tttttctctctcaattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatagttgttcaaatatcattgctc 25940556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 18157167 - 18157073
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  18157167 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatagttgttcaaatatcattgctca 18157073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 27688726 - 27688819
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||  |||| |||||||||||||||    
T  27688726 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaatagattgtaccaaataattgtacaaatatcattgctc 27688819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 43107700 - 43107792
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgc 153  Q
    ||||| ||||| ||||| ||||| ||||||||||||| |||||| ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  43107700 ttttttctctctccattgtttttgaccaatgaaaagaaagaaaaggaaggttgttaaataggttgtaccaaatggttgttcaaatatcattgc 43107792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 6655599 - 6655506
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| ||||||||||||||| |||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||    
T  6655599 tttttctctctccattgtttttaaccaatgaaaagagataaaaagaagattgtcaaaaagattgtaccaaatggttgtttaaatatcattgctc 6655506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 30941271 - 30941359
Alignment:
Q  67 ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| ||||| ||||| ||||||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  30941271 ctctctccattgtttttaaccaatgaaaaaagagaaaaggaaggttgtcaaataggttgtactaaatggttgttcaaatatgattgctc 30941359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 43444722 - 43444798
Alignment:
Q  67 ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaa 143  Q
    ||||| ||||| ||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  43444722 ctctctccattgttttttaccaatgaaaagggagaaaatgaaggttgtcaaataggttgtaccaaatggttgttcaa 43444798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 35072210 - 35072134
Alignment:
Q  79 tttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| |||||||| |||||||||||||||| |||||||| || ||||||||||| |||||||||||||||||||||    
T  35072210 ttttttaccaatgagaagagagaaaatgaagattgtcaaaaaggttgtaccaaatagttgttcaaatatcattgctc 35072134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 35098564 - 35098476
Alignment:
Q  67 ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| ||||| ||||| |||||||| |||||||||||||||| |||||||| || ||||||||||| ||||||||| |||||||||||    
T  35098564 ctctctccattgttttttaccaatgagaagagagaaaatgaagattgtcaaaaaggttgtaccaaatagttgttcaattatcattgctc 35098476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 43079584 - 43079518
Alignment:
Q  89 atgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||||||||||||||  ||||||||||||||  || ||||||||||||||||||||||||||||||    
T  43079584 atgaaaagagagaaaagaaaggttgtcaaataagttttaccaaatggttgttcaaatatcattgctc 43079518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 30538655 - 30538740
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacatcatattttta---ctctccccattatttttcaccaatgaaaagagagaa 102  Q
    ||||||||||  |||||||||||| |||||||||||| |||||||||   ||||| ||| ||||||| ||||||||||||||||||    
T  30538655 tacaacttttgtacaactttctctctcatactcacattatatttttatttctctctccaatattttttaccaatgaaaagagagaa 30538740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 29034147 - 29034240
Alignment:
Q  37 tttctctttcatactcacatcatatttttactctccc--cattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtac 128  Q
    ||||||| |||||||||||| ||||| |||| ||| |  |||| ||||| |||||||||||||||||||| |||| |||||||| || ||||||    
T  29034147 tttctctctcatactcacattatattcttaccctctcttcattgtttttgaccaatgaaaagagagaaaaagaagattgtcaaaaaggttgtac 29034240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 40693569 - 40693519
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  40693569 acaacttttagacaactttctctctcatacttacattatatttttactctc 40693519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 43107640 - 43107690
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  43107640 acaacttttagacaactttatctctcatactcacattatatttttactctc 43107690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 26123397 - 26123449
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctccc 73  Q
    ||||||||||||||||||||||| ||||| |||||| ||||| ||||||||||    
T  26123397 acaacttttagacaactttctctctcatattcacattatattcttactctccc 26123449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 45154581 - 45154529
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctccc 73  Q
    |||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||    
T  45154581 acaacttttagataactttctctttcatactcacattatattcttaatctccc 45154529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 16567348 - 16567462
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaata 120  Q
    ||||||| ||||| |||||||||||||||||||| ||||| |||  ||||| | ||| ||||  ||||||||||||||   |||| || ||||||||  |    
T  16567348 aactttttgacaattttctctttcatactcacattatattcttattctctctctattgttttggaccaatgaaaagagtacaaattaaagttgtcaacaa 16567447  T
Q  121 gattgtaccaaatgg 135  Q
     ||||||||||||||    
T  16567448 aattgtaccaaatgg 16567462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 16598314 - 16598200
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaata 120  Q
    ||||||| ||||| |||||||||||||||||||| ||||| |||  ||||| | ||| ||||  ||||||||||||||   |||| || ||||||||  |    
T  16598314 aactttttgacaattttctctttcatactcacattatattcttattctctctctattgttttggaccaatgaaaagagtacaaattaaagttgtcaacaa 16598215  T
Q  121 gattgtaccaaatgg 135  Q
     ||||||||||||||    
T  16598214 aattgtaccaaatgg 16598200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 46651761 - 46651848
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||||  | ||||||| |   |||||| || ||||||||||||||||||    
T  46651761 tttttctctctccattgtttttgaccaatgaaaagagagaaaatagaagttgtcacaagaattgtatcatatggttgttcaaatatca 46651848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 4678093 - 4678143
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||| ||||||| |||||||||||| ||||| ||||||||    
T  4678093 acaacttttagacaattttctctctcatactcacattatattcttactctc 4678143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 36186912 - 36186787
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattg 125  Q
    |||| ||||||||||||| |||||||||||| ||||| ||| |||| | ||| ||||  || ||||||||||||  |||| || |||||||   |  ||     
T  36186912 tttttgacaactttctctctcatactcacattatattcttattctctctattgttttgtactaatgaaaagagaacaaataaaagttgtcatcaaagtta 36186813  T
Q  126 taccaaatggttgttcaaatatcatt 151  Q
    |||||||||||||| || ||||||||    
T  36186812 taccaaatggttgtacatatatcatt 36186787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 36920833 - 36920926
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgt 114  Q
    |||| |||| ||||||||||||| ||||||| |||| || || ||| |||| | ||||||||| |||||| ||| |||||||||| || |||||    
T  36920833 acaattttttgacaactttctctctcatacttacattatcttcttattctctctattatttttgaccaatcaaatgagagaaaatcaaagttgt 36920926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 38023460 - 38023415
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||    
T  38023460 ttttagacaactttctctctcatactcacattctatttttactctc 38023415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 47954132 - 47954095
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||||||||||||||||| |||||||||||    
T  47954132 gacaactttctctttcatactcacattatatttttact 47954095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 5978668 - 5978755
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca-aatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||||  | ||||||| || || ||||| || ||||||||||||||||||    
T  5978668 tttttctctctccattgtttttgaccaatgaaaagagagaaaatagaagttgtcacaagag-ttgtatcatatggttgttcaaatatca 5978755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 24267688 - 24267648
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatat 61  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  24267688 acaacttttagacaactttctctctcatactcacattatat 24267648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 31364927 - 31364875
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||| |||| ||||| |||||||||||||||||||| ||||||||| ||||    
T  31364927 ttacaattttttgacaattttctctttcatactcacattatatttttattctc 31364875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 33056650 - 33056698
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||| ||||| |||||| ||||| ||||||||    
T  33056650 aacttttagacaactttctctctcatattcacattatattattactctc 33056698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 43444664 - 43444704
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  43444664 gacaactttctctctcatacttacatcatatttttactctc 43444704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 4971320 - 4971367
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||| |||||||||||| |||||||||||| ||||| |||||    
T  4971320 acaacttttatacaactttctctctcatactcacattatattcttact 4971367  T

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Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 17002366 - 17002413
Alignment:
Q  21 acaactttta-gacaactttctctttcatactcacatcatatttttac 67  Q
    |||||||||| || ||||||||||||||||||||||| ||||||||||    
T  17002366 acaacttttatgataactttctctttcatactcacattatatttttac 17002413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 25332537 - 25332494
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatattttta 66  Q
    ||||||||||||| ||||||||||||||||| || |||||||||    
T  25332537 aacttttagacaattttctctttcatactcatattatattttta 25332494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 33212072 - 33212202
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaa 118  Q
    |||| |||| ||||||||| ||| |||||||||||| || ||||||  ||||| | ||||||||| |||||| ||| |||||| ||| || ||||||| |    
T  33212072 acaattttttgacaactttatctctcatactcacattatctttttattctctctctattatttttgaccaatcaaatgagagacaattaaagttgtcata 33212171  T
Q  119 tagattgtaccaaatggttgttcaaatatca 149  Q
     |  ||||||||||  ||||| || ||||||    
T  33212172 gaagttgtaccaaagagttgtacatatatca 33212202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 12141990 - 12142060
Alignment:
Q  79 tttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||| ||||||||||||| ||||||  || ||||||| | |  ||||| |||||||||||||||||||||    
T  12141990 tttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaatggttgttcaaatatca 12142060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 28548263 - 28548124
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacatcatattttta----ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtc 115  Q
    ||||||||||  |||||||||||| |||||||||||| || ||||||    ||||| | ||| ||||| |||||| | ||||||||| |  || ||||||    
T  28548263 tacaacttttgtacaactttctctctcatactcacattatgtttttattctctctctctattctttttaaccaataagaagagagaacaataaagttgtc 28548164  T
Q  116 aaatagattgtac-caaatggttgttcaaatatcattgct 154  Q
      | |||||||||  ||||||||||| |||||||| ||||    
T  28548163 tcaaagattgtactaaaatggttgttaaaatatcactgct 28548124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 34304719 - 34304669
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| |||||||||| ||||||| |||||||||||| ||||| ||||||||    
T  34304719 acaatttttagacaattttctctctcatactcacattatattcttactctc 34304669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 40949941 - 40949891
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||| |||||||||||||| ||||||| |||| ||||| ||||||||    
T  40949941 acaactttcagacaactttctctctcatacttacattatattcttactctc 40949891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 42640873 - 42640923
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||| |||||||||||||| ||||||||||| || |||||| ||||    
T  42640873 acaactttttgacaactttctcttacatactcacattatctttttattctc 42640923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 10619735 - 10619690
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| ||||||||||||| |||||||||||| ||||| ||||||||    
T  10619735 tttttgacaactttctctctcatactcacattatattcttactctc 10619690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 29855267 - 29855304
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  29855267 gacaactttctctctcatactcacattatatttttact 29855304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 31445358 - 31445395
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  31445358 gacaactttctttttcatactcacattatatttttact 31445395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 35098734 - 35098697
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  35098734 gacaactttctctttcatactcacattctatttttact 35098697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 35098823 - 35098790
Alignment:
Q  21 acaacttttagacaactttctctttcatactcac 54  Q
    |||||||||| |||||||||||||||||||||||    
T  35098823 acaacttttaaacaactttctctttcatactcac 35098790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 38023396 - 38023315
Alignment:
Q  74 cattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| |||||| |||| ||| ||||  ||| |||||||||| |||||| ||||| | |||||||||||||| ||||    
T  38023396 cattgtttttgaccaataaaaatagataaaagaaagattgtcaaataaattgtatcaaatagctgttcaaatatcatagctc 38023315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 42467239 - 42467284
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||| |||||||  |||||||||||| ||||||||||||||    
T  42467239 ttttagacagctttctccctcatactcacattatatttttactctc 42467284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 42584843 - 42584880
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  42584843 gacaactttctctctcatactcacattatatttttact 42584880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 47644740 - 47644785
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  47644740 tttttgacaactttctctctcatactcacattatatttttattctc 47644785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 5378656 - 5378692
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  5378656 tacaactttttgacaactttctctctcatactcacat 5378692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 7390756 - 7390669
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca-aatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||||||||| | |||| ||||||||||||| ||| |||||||  | | ||||||  ||||||||||||||||||||    
T  7390756 tttttctctctccattatttttaatcaataaaaagagagaaaaagaa-gttgtcaccaaaaattgtatgaaatggttgttcaaatatca 7390669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 8061667 - 8061635
Alignment:
Q  123 ttgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||||||||||||||||||||||| |||||||    
T  8061667 ttgtaccaaatggttgttcaaatattattgctc 8061635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 21588964 - 21588916
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| || ||||||| ||||||| |||| ||||||||||||||    
T  21588964 aacttttagataattttctctctcatacttacattatatttttactctc 21588916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 22692201 - 22692261
Alignment:
Q  94 aagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgct 154  Q
    |||||||||||  ||| |||||||| ||||| ||| |||| ||||||||||||| ||||||    
T  22692201 aagagagaaaagaaagattgtcaaaaagattatactaaatagttgttcaaatatgattgct 22692261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 37856196 - 37856121
Alignment:
Q  31 gacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    ||||||||| |||  ||||||||||| ||| | |||  ||||| ||||| ||||| ||||||||||||||||||||    
T  37856196 gacaactttatctcacatactcacattatactcttattctctctccattgtttttgaccaatgaaaagagagaaaa 37856121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 38990136 - 38990176
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatattttta 66  Q
    |||| ||||||||| |||||||||||||||| |||||||||    
T  38990136 ttttggacaactttttctttcatactcacatgatattttta 38990176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 41989772 - 41989736
Alignment:
Q  32 acaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||| |||||||||||| |||||||||||    
T  41989772 acaactttctctctcatactcacattatatttttact 41989736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 44564764 - 44564712
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctccc 73  Q
    |||| |||||||||||||| | |||||||||||||| ||||| ||| ||||||    
T  44564764 acaatttttagacaactttttatttcatactcacattatattcttaatctccc 44564712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 44817753 - 44817832
Alignment:
Q  38 ttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtc 115  Q
    |||||||||||||| |||| |||||||||  ||||| | ||| ||||  |||||||| ||||| ||||||||| ||||||    
T  44817753 ttctctttcatacttacattatatttttattctctctctattgttttggaccaatgagaagagcgaaaatgaaagttgtc 44817832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 47905151 - 47905107
Alignment:
Q  27 tttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||| ||| |||||||| ||||| ||||||||    
T  47905151 tttagacaactttctctctcacactcacattatattcttactctc 47905107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 48522185 - 48522221
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  48522185 tacaacttttagacaactttttctctcatactcacat 48522221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 9636140 - 9636046
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9636140 tttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctca 9636046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 24792559 - 24792634
Alignment:
Q  80 ttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24792559 ttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctc 24792634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 36581449 - 36581356
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  36581449 tttttctctctccattgtttttgaccaataaaaagagaaaaaatgaaggttgtcaaataggttgtacaaaatggttgttcaaatatcattgctc 36581356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 13734343 - 13734248
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    ||||| ||||| ||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||  ||||||||    
T  13734343 ttttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaatagattgtaccaaatggttgttcatatacaattgctca 13734248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 91316 - 91397
Alignment:
Q  74 cattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||||||||||||||||||  ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  91316 cattgtttttgaccaatgaaaagagagaaaagaaaggttgtcaaataggttgtatcaaatggttgttcaaatatcattgctc 91397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 6865769 - 6865676
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||| || ||||||||||||||| || ||||| ||||||||||||| |||||||    
T  6865769 tttttctctctccattgtttttgaccaatgaaaagagagaaaataaaagttgtcaaatagattatatcaaatagttgttcaaatattattgctc 6865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 15639474 - 15639567
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| || ||||||||||| ||| ||||| | ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  15639474 tttttctctctccattgttcttcaccaatgagaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 15639567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 582851 - 582757
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| || || ||||| ||||||||||||||||| || ||||||||||||| |  |||||||||||| |||||||||||||||||||||    
T  582851 tttttctctctcctttgtttttgaccaatgaaaagagagagaaagaaggttgtcaaaaatcttgtaccaaatgattgttcaaatatcattgctca 582757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 28904079 - 28904178
Alignment:
Q  60 atttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaa----tggttgttcaaatatcattgctc 155  Q
    |||||| ||||| ||||| ||||| |||||| |||| |||||||| |||||||||||||||| ||||||||||    |||||||||||||||||||||||    
T  28904079 attttttctctctccattgtttttgaccaataaaaaaagagaaaaggaaggttgtcaaataggttgtaccaaataattggttgttcaaatatcattgctc 28904178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 28940474 - 28940573
Alignment:
Q  60 atttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaa----tggttgttcaaatatcattgctc 155  Q
    |||||| ||||| ||||| ||||| |||||| |||| |||||||| |||||||||||||||| ||||||||||    |||||||||||||||||||||||    
T  28940474 attttttctctctccattgtttttgaccaataaaaaaagagaaaaggaaggttgtcaaataggttgtaccaaataattggttgttcaaatatcattgctc 28940573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 36624419 - 36624501
Alignment:
Q  74 cattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||||||||||||||||||||||  |||||||||| |||||| |||||| |||||||||||||||| ||||    
T  36624419 cattgtttttgaccaatgaaaagagagaaaatgaaaattgtcaaataaattgtatcaaatgcttgttcaaatatcattactca 36624501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 7144687 - 7144758
Alignment:
Q  85 accaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||||| ||||||||||||| ||||||||||||| || ||||| |||||||||| |||||||||||||||||    
T  7144687 accaataaaaagagagaaaaagaaggttgtcaaaaaggttgtatcaaatggttgctcaaatatcattgctca 7144758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 2117665 - 2117535
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaa 118  Q
    ||||||||  ||||||||||||| |||||||||||| ||||| |||  ||||| ||||| ||||| ||||||||||| ||||||||   | ||||||| |    
T  2117665 acaactttgtgacaactttctctctcatactcacattatattcttattctctctccattgtttttaaccaatgaaaaaagagaaaaaagaagttgtcaca 2117566  T
Q  119 tagattgtaccaaatggttgttcaaatatca 149  Q
     |  ||||| ||||| |||||||||||||||    
T  2117565 aaagttgtatcaaatagttgttcaaatatca 2117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 19437346 - 19437440
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| | ||| ||||| |||||| |||||||||||||  |||||||||||| |  |||||| |||| ||||||||||||||| ||||||    
T  19437346 tttttctctctctattgtttttgaccaatcaaaagagagaaaagaaaggttgtcaaaaatgttgtactaaatagttgttcaaatatcagtgctca 19437440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 39595363 - 39595457
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||   | ||||||| | |  ||||| ||||||||||||||||||||||| ||||    
T  39595363 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcattactca 39595457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 26627361 - 26627406
Alignment:
Q  22 caacttttagacaactttctctttcatactcacatcatatttttac 67  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  26627361 caacttttagacaactttctctttcatactcacattatattcttac 26627406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 32732050 - 32732005
Alignment:
Q  110 gttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||    
T  32732050 gttgtcataaagattgtaccaaatggttgttcaaatatcattgctc 32732005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 34381101 - 34381188
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||   | ||||||| | | ||| || |||||||||||||||||||||    
T  34381101 tttttctctctccattgtttttgaccaatgaaaagagagaaaaacgaagttgtcacaaaaattatatcaaatggttgttcaaatatca 34381188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 91245 - 91295
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||| ||||||||||||| |||||||||||| ||||| ||||||||    
T  91245 acaacttttggacaactttctctctcatactcacattatattcttactctc 91295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 3771047 - 3770953
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtc 115  Q
    ||||||||| ||||||  ||||| |||||||||||| || || ||| |||| | ||| ||||| |||||| ||||||||||||| ||||| ||||    
T  3771047 acaactttttgacaaccctctctctcatactcacattatgttcttattctctctattgtttttgaccaataaaaagagagaaaaagaaggctgtc 3770953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 6046343 - 6046393
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  6046343 acaactttttgacaactttctctctcatactcacattatatttttattctc 6046393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 7287233 - 7287183
Alignment:
Q  19 ttacaactttta-gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||  |||||||||||||||||||||||||| |||||||||||    
T  7287233 ttacaacttttgtgacaactttctctttcatactcacattatatttttact 7287183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 11881028 - 11880978
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| |||||||||||| || || ||||||||    
T  11881028 acaacttttagacaactttctctctcatactcacattatcttcttactctc 11880978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 20040818 - 20040868
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| |||||||||| |||||||||||||| ||||| ||||||||    
T  20040818 acaacttttacacaactttctttttcatactcacattatattcttactctc 20040868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 26627419 - 26627513
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||| |||| | | || |||||||| |||||||||||   |  ||||||||||| ||||||||||||||||||||||    
T  26627419 tttttctctctccattgtttttgaccattaataaaagagaaaaagaaggttgtcatgaaagttgtaccaaatagttgttcaaatatcattgctca 26627513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 28904021 - 28904071
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| ||||||||||||  |||| ||||||||    
T  28904021 acaacttttagacaactttctctctcatactcacattctattcttactctc 28904071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 28940416 - 28940466
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| ||||||||||||  |||| ||||||||    
T  28940416 acaacttttagacaactttctctctcatactcacattctattcttactctc 28940466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 4088484 - 4088521
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||||||||||||||||| |||||||||||    
T  4088484 gacaactttctctttcatactcacattatatttttact 4088521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 5698310 - 5698217
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||| | || |||||||| |||||||||||   |  |||||||||||| |||||| |||||||||||||    
T  5698310 tttttctctctccattgtttttgaccaataacaaaagagaaaaagaaggttgtcatgaaagttgtaccaaatgattgttctaatatcattgctc 5698217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 16690540 - 16690577
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||||||||||||||||| |||||||||||    
T  16690540 gacaactttctctttcatactcacattatatttttact 16690577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 23991266 - 23991311
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||    
T  23991266 tttttgacaactttctctttcatagtcacattatatttttactctc 23991311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 26626801 - 26626708
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||| | || ||||||||  ||||||||||   |  ||||| |||||||||||||||||||||||||||    
T  26626801 tttttctctctccattgtttttgaccaataacaaaagagaaaaaaaaggttgtcatgaaagttgtaacaaatggttgttcaaatatcattgctc 26626708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 32873190 - 32873145
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta 66  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||||    
T  32873190 acaactttttgacaactttctctatcatactcacattatattttta 32873145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 33567254 - 33567134
Alignment:
Q  31 gacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtac 128  Q
    ||||||||||||| |||||||||||| ||  | |||  ||||| ||||| ||||| ||||||||||||||||||||   |  |||||| | |  |||||     
T  33567254 gacaactttctctctcatactcacattattctcttattctctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtat 33567155  T
Q  129 caaatggttgttcaaatatca 149  Q
    |||||||||||||| ||||||    
T  33567154 caaatggttgttcatatatca 33567134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 38387800 - 38387892
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||| ||||||| | |||| | |||||||||||  ||  |||||| | || |||||||||||||||||||||||||||||||||    
T  38387800 tttttctctctccaatatttttgatcaataagaagagagaaaaaaaaa-ttgtcataaaggttgtaccaaatggttgttcaaatatcattgctc 38387892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 5698367 - 5698319
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| |||||||| | |||||||||||| ||||||||||||||    
T  5698367 aacttttagataactttctttctcatactcacattatatttttactctc 5698319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 6865818 - 6865778
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  6865818 gacaactttctctctcatactcacataatatttttactctc 6865778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 20040924 - 20040956
Alignment:
Q  123 ttgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||||||||||||||||||||||||||||||||    
T  20040924 ttgtaccaaatggttgttcaaatatcattgctc 20040956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 36624350 - 36624398
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||| ||||||| |||||||||||| ||||| ||||||||    
T  36624350 aacttttagacaattttctctctcatactcacattatattcttactctc 36624398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 3723058 - 3722963
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctcag 157  Q
    |||| ||||| ||||| ||||  |||||| ||||||||||||||||| |||||||   |  |||| |||||||||||| || |||||||| |||||    
T  3723058 tttttctctctccattgttttggaccaataaaaagagagaaaatgaaagttgtcatcaaagttgtcccaaatggttgtacatatatcattactcag 3722963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 26626858 - 26626811
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    |||| ||||||||||||||||||||||||||||| | ||||| |||||    
T  26626858 acaagttttagacaactttctctttcatactcacgttatattcttact 26626811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 39458692 - 39458814
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagat 123  Q
    |||| ||||||||||||| |||||||||||| ||  | |||  ||||| ||||| ||||| ||||||||||||||| ||||  || ||||||| | | ||    
T  39458692 tttttgacaactttctctctcatactcacattatcctcttattctctctccattgtttttgaccaatgaaaagagataaaaaaaaagttgtcacaaaaat 39458791  T
Q  124 tgtaccaaatggttgttcaaata 146  Q
    ||||  | ||||||||| |||||    
T  39458792 tgtataatatggttgtttaaata 39458814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 17063895 - 17063945
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| |||||||| ||| |||||||||||| ||||||||| ||||    
T  17063895 acaacttttaaacaactttatctctcatactcacattatatttttattctc 17063945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 19522047 - 19521997
Alignment:
Q  19 ttacaactttta-gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||  |||||||||||||||||||||||||| || ||||||||    
T  19522047 ttacaacttttgtgacaactttctctttcatactcacattatctttttact 19521997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 23991337 - 23991415
Alignment:
Q  79 tttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgt-accaaatggttgttcaaatatcattgctca 156  Q
    ||||| ||||||||||||||||||||   ||||| ||||| |  |||| | ||||||||||||||||||||||| ||||    
T  23991337 tttttgaccaatgaaaagagagaaaaatgaggttctcaaaaaagttgttagcaaatggttgttcaaatatcattcctca 23991415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 26660452 - 26660402
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||| | ||||||||||||| |||||||||||| ||||||||| ||||    
T  26660452 acaacttcttgacaactttctctctcatactcacattatatttttattctc 26660402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 26932044 - 26931994
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||| | ||||||||||||| |||||||||||| ||||||||| ||||    
T  26932044 acaacttcttgacaactttctctctcatactcacattatatttttattctc 26931994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 29803255 - 29803305
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| |||||||||||| ||||| |||||| ||||| ||||||||    
T  29803255 acaacttttaaacaactttctctctcatattcacattatattcttactctc 29803305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 33037547 - 33037597
Alignment:
Q  19 ttacaactttta-gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||| ||||||||||||| |||||||||||| || ||||||||    
T  33037547 ttacaacttttatgacaactttctctctcatactcacattatctttttact 33037597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 36572721 - 36572771
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||| ||||||| |||||||||||||||||| || |||||| ||||    
T  36572721 acaactttttgacaactctctctttcatactcacattatgtttttattctc 36572771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 36713219 - 36713169
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||| | ||||||||||||| |||||||||||| ||||||||| ||||    
T  36713219 acaacttcttgacaactttctctctcatactcacattatatttttattctc 36713169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 38691007 - 38690957
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| ||||| |||||||||||||||||| |||||| ||| ||||||||||    
T  38691007 acaatttttaaacaactttctctttcatattcacattataattttactctc 38690957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 39788747 - 39788660
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt----tttactctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    ||||||||| ||||||||||||| |||||||||||| | |||    ||| ||||| ||||||||||| || ||| | |||||||||||    
T  39788747 acaacttttggacaactttctctctcatactcacatgagattcttattttctctctccattatttttgacgaataagaagagagaaaa 39788660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 2863638 - 2863727
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcatt 151  Q
    |||| ||||| ||||||||||| ||||||||||||||| || |  |||||||||  | | ||||||| ||||  ||||| ||||||||||    
T  2863638 tttttctctctccattatttttgaccaatgaaaagagataacaacaaggttgtcccaaaaattgtactaaataattgtttaaatatcatt 2863727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 15639415 - 15639456
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    ||||||||||||||||||| ||| |||||||||||| |||||    
T  15639415 acaacttttagacaactttttctctcatactcacattatatt 15639456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 18638868 - 18638736
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca 116  Q
    ||||||||||| ||||| ||| ||| |||||||||||| ||||| |||  ||||| | ||||||||  |||||| | || ||||||||| || |||||||    
T  18638868 ttacaactttttgacaaatttatctctcatactcacattatattcttattctctctctattattttggaccaataagaaaagagaaaataaaagttgtca 18638769  T
Q  117 aatagattgtaccaaatggttgttcaaatatca 149  Q
       |  |||| |||||||||||| || ||||||    
T  18638768 tcaaagttgtcccaaatggttgtacatatatca 18638736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 21023326 - 21023363
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacat 56  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  21023326 ttacaactttttgacaactttctctctcatactcacat 21023363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 22098296 - 22098333
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  22098296 gacaactttctctctcatactcacattatatttttact 22098333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 31329167 - 31329126
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    ||||||||| ||||||||||||| |||||||||||| |||||    
T  31329167 acaactttttgacaactttctctatcatactcacattatatt 31329126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 3031863 - 3031899
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    ||||||||||  |||||||||||||||||||||||||    
T  3031863 tacaacttttgtacaactttctctttcatactcacat 3031899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 5130360 - 5130272
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca-aatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||   | ||||||| || | ||||||  |||| |||||||||||||||    
T  5130360 tttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaaaattgtatgaaatagttgttcaaatatca 5130272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 5386099 - 5386135
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  5386099 tacaacttttaaacaactttctctctcatactcacat 5386135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 9636198 - 9636158
Alignment:
Q  22 caacttttagacaactttctctttcatactcacatcatatt 62  Q
    |||||||||| ||||||||||| |||||||||||| |||||    
T  9636198 caacttttaggcaactttctctctcatactcacattatatt 9636158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 12612993 - 12612909
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaa-tggttgttcaaatatcatt 151  Q
    |||| ||||| ||||| |||||||| ||||||||| |  |||||||||  | |  |||||||||| |||||||||||||||||||    
T  12612993 tctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaatggttgttcaaatatcatt 12612909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 33626674 - 33626634
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatattttta 66  Q
    |||| ||||||||||||| |||||||||||| |||||||||    
T  33626674 tttttgacaactttctctctcatactcacattatattttta 33626634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 38293389 - 38293353
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttac 67  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  38293389 gacaactttctctatcatactcacattatatttttac 38293353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 39840752 - 39840700
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||| ||||||| |||||||||||| ||||| ||| ||||    
T  39840752 ttacaactttttgacaaatttctctctcatactcacattatattcttattctc 39840700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 40364598 - 40364646
Alignment:
Q  21 acaactttta-gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||| ||||||||||||| |||||||||||| |||||| ||||    
T  40364598 acaacttttatgacaactttctctctcatactcacattatatttctact 40364646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 36740400 - 36740494
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| ||||| ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36740400 ttttttctctctccattgtttttgatcaatgaaaagagagaaaatgaaggttgtcaaatagattgtatcaaatggttgttcaaatatcattgctc 36740494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 1796572 - 1796666
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  1796572 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaacaaatggttgttcaaatatcattgctca 1796666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 5782902 - 5782967
Alignment:
Q  87 caatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattg 152  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  5782902 caatgaaaagagagaaaatgaaagttgtcaaataggttgtaccaaatggttgttcaaatatcattg 5782967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 6005039 - 6005126
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| |||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||| ||||||||||    
T  6005039 tctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataagttgtaccaaatggttgttcaaacatcattgctc 6005126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 32725764 - 32725670
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| | ||| ||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||| |||||||||||||||    
T  32725764 tttttctctctctattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaatagattatactaaatagttgtttaaatatcattgctca 32725670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 155
Target Start/End: Complemental strand, 38174270 - 38174137
Alignment:
Q  25 cttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaataga 122  Q
    ||||||||||||||||||| |||||||||||| ||||| |||  ||||| ||||| ||||| ||||||||  ||||||| || | ||||||||| | |      
T  38174270 cttttagacaactttctctctcatactcacattatattcttattctctctccattgtttttgaccaatgaggagagagagaaaggaggttgtcatagaag 38174171  T
Q  123 ttg-taccaaatggttgttcaaatatcattgctc 155  Q
    ||| || |||||||||||||||||||||||||||    
T  38174170 ttgttagcaaatggttgttcaaatatcattgctc 38174137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 12045635 - 12045542
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||| |||||| || | ||||||||||||| || || ||||||||||||||||||||||||||||||    
T  12045635 tttttctctctccattgtttttgaccaatgagaagagacaagaagaaggttgtcaaaaaggttataccaaatggttgttcaaatatcattgctc 12045542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 42443201 - 42443288
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| |||||||| ||| ||||| | ||||||||||||| |  ||||||||||| |||||||||||||||||||||    
T  42443201 tctctccattgtttttgaccaatgagaagggagaagaagaaggttgtcaaaaaatttgtaccaaatagttgttcaaatatcattgctc 42443288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 6849302 - 6849252
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||| |||||||||||||||| ||||| ||||||||    
T  6849302 acaacttttagacaactttatctttcatactcacattatattcttactctc 6849252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 42443134 - 42443184
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  42443134 acaacttttagacaactttctctctcatactcacattatattattactctc 42443184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 37392096 - 37392015
Alignment:
Q  76 ttatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgt-accaaatggttgttcaaatatcattgctca 156  Q
    |||||||| |||||| ||||||||| |||  ||| |||||||| | ||||| | ||||||||||||||||||||||||||||    
T  37392096 ttatttttaaccaataaaaagagaggaaaaaaagtttgtcaaaaaaattgttaacaaatggttgttcaaatatcattgctca 37392015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 3756929 - 3756981
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||||||||||||||||||||| || ||||||||| ||||    
T  3756929 ttacaactttttgacaactttctctttcatactcatattatatttttattctc 3756981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 6004974 - 6005024
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| |||||||||||||||||| |||||||||||| ||||| ||||||||    
T  6004974 acaatttttagacaactttctctctcatactcacattatattcttactctc 6005024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 9550448 - 9550351
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca 116  Q
    ||||||||| ||||||||||||| |||||||||||| || || |||  ||||| | ||||||||| ||| || |||||| ||||||| || |||||||    
T  9550448 acaactttttgacaactttctctctcatactcacattatcttcttattctctctctattatttttgacctatcaaaagatagaaaattaaagttgtca 9550351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 9895095 - 9895185
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca-aatagattgtaccaaatggttgttcaaatatcatt 151  Q
    |||| ||||| ||||||||||| |||||||||||||||||||| | ||||| |||  | || |  || |||||||||||||||||||||||    
T  9895095 tttttctctctccattatttttaaccaatgaaaagagagaaaagggaggttatcatgaaagttgttagcaaatggttgttcaaatatcatt 9895185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 12045694 - 12045653
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  12045694 acaacttttagacaactttctctctcatactcacattatatt 12045653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 14548859 - 14548814
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||||    
T  14548859 ttttagacaactttctctctcatactcacattatattcttactctc 14548814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 32725816 - 32725771
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||    
T  32725816 ttttagacaattttttctctcatactcacatcatatttttactctc 32725771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 44380596 - 44380503
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| | ||| ||||| |||||| |||| ||||||||  |||||||||||| || |||||| |||| |||||| |||||||| |||||    
T  44380596 tttttctctctctattgtttttgaccaatcaaaaaagagaaaagaaaggttgtcaaaaaggttgtactaaatagttgtttaaatatcagtgctc 44380503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 45238578 - 45238674
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtc 115  Q
    ||||||||| || || ||||| | ||||||||||||||||||||||  |||| || ||||||||| |||||| |||| |||| ||||| | ||||||    
T  45238578 acaactttttgataattttctatctcatactcacatcatatttttattctcttcctattattttttaccaataaaaatagaggaaatggaagttgtc 45238674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 69559 - 69515
Alignment:
Q  111 ttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||    
T  69559 ttgtcaaataggttgtatcaaatggttgttcaaatagcattgctc 69515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 23258132 - 23258208
Alignment:
Q  73 ccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||| ||||| ||||||||||||||||||||   | ||||||| | | |||||  |||||||||||||||||||||    
T  23258132 ccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtttcaaatggttgttcaaatatca 23258208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 28623150 - 28623053
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatattttta----ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca 116  Q
    ||||||| ||||||||||||||||||||||| || | |||||||    ||||| ||||| ||||| |||||| | || ||||||||  ||||||||||    
T  28623150 aactttttgacaactttctctttcatactcatatgagatttttattctctctctccattgtttttgaccaataagaaaagagaaaagcaaggttgtca 28623053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 28927770 - 28927857
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagaga-aaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||| ||||| ||||||||||||||||| ||| ||| ||||||| | | ||| || |||||||||||||||||||||    
T  28927770 tttttctctctccattgtttttgaccaatgaaaagagagagaaaagaa-gttgtcacaaaaattttatcaaatggttgttcaaatatca 28927857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 5642429 - 5642386
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatattttta 66  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||    
T  5642429 aactttttgacaactttctctctcatactcacattatattttta 5642386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 5644370 - 5644327
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatattttta 66  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||    
T  5644370 aactttttgacaactttctctctcatactcacattatattttta 5644327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 6440109 - 6440159
Alignment:
Q  19 ttacaactttta-gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||  ||||||||||||| |||||||||||| |||||||||||    
T  6440109 ttacaacttttgtgacaactttctctctcatactcacattatatttttact 6440159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 20853041 - 20853102
Alignment:
Q  97 agagaaaatgaaggttgtcaaata--gattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||||||| |||| |||||||| |  |||||||||||||| |||||||||||||||| ||||    
T  20853041 agagaaaaagaagattgtcaaaaaaagattgtaccaaatgattgttcaaatatcatttctca 20853102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 28570389 - 28570347
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||    
T  28570389 tttttctctctccattatttttaaccaatgaaaagagagaaaa 28570347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 28577982 - 28577940
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||    
T  28577982 tttttctctctccattatttttaaccaatgaaaagagagaaaa 28577940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 29509295 - 29509337
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacatcatatt 62  Q
    |||||||||| ||||||||||||| |||||||||||| |||||    
T  29509295 tacaactttttgacaactttctctctcatactcacatgatatt 29509337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 37562182 - 37562132
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| |||||||| ||| ||||| ||| ||||    
T  37562182 acaacttttagacaactttctctctcatactcgcatgatattcttattctc 37562132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 40528778 - 40528820
Alignment:
Q  21 acaactttta-gacaactttctctttcatactcacatcatatt 62  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  40528778 acaacttttatgacaactttctctttcatactcacagcatatt 40528820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 6105479 - 6105442
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacat 56  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  6105479 ttacaactttttgacaactttctctctcatactcacat 6105442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 9314566 - 9314595
Alignment:
Q  127 accaaatggttgttcaaatatcattgctca 156  Q
    ||||||||||||||||||||||||||||||    
T  9314566 accaaatggttgttcaaatatcattgctca 9314595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 10344422 - 10344471
Alignment:
Q  67 ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca 116  Q
    ||||||||||||||||| |||||| |||||| ||||||  ||||||||||    
T  10344422 ctctccccattatttttgaccaataaaaagaaagaaaaacaaggttgtca 10344471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 12490808 - 12490763
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||||||||| |||||||||||| || |||||| ||||    
T  12490808 ttttagacaactttctctctcatactcacattatgtttttattctc 12490763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 12659082 - 12659123
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    ||||||||| ||||||||||||| |||||||||||| |||||    
T  12659082 acaactttttgacaactttctctctcatactcacattatatt 12659123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 23754737 - 23754700
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||||||||||||| || |||||||||||    
T  23754737 gacaactttctctttcatactcatattatatttttact 23754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 25830276 - 25830239
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  25830276 gacaactttctctctcatactcacattatatttttact 25830239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 35067201 - 35067238
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  35067201 gacaactttctctctcatactcacattatatttttact 35067238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 42996556 - 42996593
Alignment:
Q  67 ctctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  42996556 ctctctccattatttttgaccaatgaaaagagagaaaa 42996593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 43285993 - 43285956
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  43285993 gacaactttctctctcatactcacattatatttttact 43285956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 43715915 - 43715952
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  43715915 gacaactttctctctcatactcacattatatttttact 43715952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 21273693 - 21273605
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||| ||||| | ||| ||||| ||||||||||||||||||||  || ||||||| | |  |||||  |||| |||||||||||||||    
T  21273693 ttttttctctctctattgtttttaaccaatgaaaagagagaaaagaaaagttgtcacaaaagttgtatgaaatagttgttcaaatatca 21273605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 21649210 - 21649174
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    ||||||||||  |||||||||||||||||||||||||    
T  21649210 tacaacttttgtacaactttctctttcatactcacat 21649174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 24798387 - 24798351
Alignment:
Q  32 acaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||| |||||||||||| |||||||||||    
T  24798387 acaactttctctctcatactcacattatatttttact 24798351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 29910248 - 29910212
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatt 62  Q
    |||| |||||||||||||||||||||||||| |||||    
T  29910248 tttttgacaactttctctttcatactcacattatatt 29910212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 29991454 - 29991486
Alignment:
Q  32 acaactttctctttcatactcacatcatatttt 64  Q
    |||||||||||||||||||||||||||| ||||    
T  29991454 acaactttctctttcatactcacatcatttttt 29991486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 39021482 - 39021434
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||| ||||||| |||||||||||||||||| || |||||| ||||    
T  39021482 aactttttgacaactctctctttcatactcacattatgtttttattctc 39021434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 40459801 - 40459753
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||  |||||||||||| |||||||||||| ||||||||| ||||    
T  40459801 aacttttgtacaactttctctctcatactcacattatatttttattctc 40459753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 49621449 - 49621543
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| ||||| ||||| ||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49621449 ttttttctctctccattgtttttgaccaataaaaagagagaaaatgaagattgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 49621543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 25061822 - 25061915
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25061822 tttttctctctccattgtttttaaccaatgaaaagagagaaaaagaaggttgtcaaatagattgtatcaaatggttgttcaaatatcattgctc 25061915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 51339682 - 51339590
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgct 154  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  51339682 tttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatagttgttcaaatatcattgct 51339590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 48872468 - 48872561
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  48872468 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtatcaaatggttgttcaaatatcattgctc 48872561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 50528039 - 50527946
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  50528039 tttttctctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaatagattgtagcaaatggttgttcaaatatgattgctc 50527946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 4604618 - 4604712
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  4604618 tttttctctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaacaggttgtaccaaatcgttgttcaaatatcattgctca 4604712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 27352719 - 27352812
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  27352719 tttttctctctccattgtttttgaccaatgaaaagagagaaaagaaaggttgtcgaataggttgtaccaaatggttgttcaaatatcattgctc 27352812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 147
Target Start/End: Complemental strand, 30530556 - 30530471
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatat 147  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  30530556 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataggttgtaccaaatggttgttcaaatat 30530471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 44730733 - 44730826
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| || || ||||| ||||||||||| |||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  44730733 tttttctctctcctttgtttttaaccaatgaaaaaagagaaaaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 44730826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 36930732 - 36930645
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| |||||| ||||||||||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||    
T  36930732 tctctccattgtttttgaccaataaaaagagagaaaaagaaggttgtcaaaaaggttgtacaaaatggttgttcaaatatcattgctc 36930645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 43612064 - 43611970
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||| |||||||||||||||||| | |||| || |||||||| |||||||||||||||| |||||||||||||||||    
T  43612064 tttttctctctccattgtttttgaccaatgaaaagagagaagaggaagattatcaaataggttgtaccaaatggttggtcaaatatcattgctca 43611970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 32821729 - 32821814
Alignment:
Q  67 ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattg 152  Q
    ||||| ||||| ||||| |||||||||||||||||||||||| |||||||||||  || || ||||||||||||||||||||||||    
T  32821729 ctctctccattgttttttaccaatgaaaagagagaaaatgaatgttgtcaaataagttttatcaaatggttgttcaaatatcattg 32821814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 25098770 - 25098683
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattg 152  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||   || ||||||||||||||||||||||||||||||    
T  25098770 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtca---aggttgtaccaaatggttgttcaaatatcattg 25098683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 16658526 - 16658625
Alignment:
Q  60 atttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaa----tggttgttcaaatatcattgctc 155  Q
    |||||| ||||| ||||| ||||| |||||| |||| |||||||| |||||||||||||||| ||||||||||    |||||||||||||||||||||||    
T  16658526 attttttctctctccattgtttttgaccaataaaaaaagagaaaaggaaggttgtcaaataggttgtaccaaataattggttgttcaaatatcattgctc 16658625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 51172290 - 51172196
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| ||||| ||||| ||||| |||||| || | ||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  51172290 ttttttctctctccattgtttttgaccaataaacaaagagaaaagaaagattgtcaaatagattgtaccaaatgattgttcaaatatcattgctc 51172196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 16987536 - 16987631
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattg-taccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| | ||||||||| | | |||| || ||||||||||||||||||||||||||||    
T  16987536 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaggaggttgtcatagaaattgttagcaaatggttgttcaaatatcattgctca 16987631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 30687141 - 30687234
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| | |||||| ||| ||||| | ||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  30687141 tttttctctctccattgtttttaaacaatgagaagggagaagaagaaggttgtcaaaaaatttgtaccaaatggttgttcaaatatcattgctc 30687234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 40596036 - 40595943
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||  |   |||||||| || ||||| |||||||||||||||||||||||||||    
T  40596036 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaaattattgtcaaaaaggttgtatcaaatggttgttcaaatatcattgctc 40595943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 48872409 - 48872459
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  48872409 acaacttttagacaaccttctctctcatactcacatcatatttttactctc 48872459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 11460883 - 11460972
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcatt 151  Q
    |||| ||||| ||||||||||| |||||| |||||| ||| || ||||||||||||| |  ||||| ||||| |||||||||||||||||    
T  11460883 tttttctctctccattatttttgaccaataaaaagaaagagaaagaaggttgtcaaaaaagttgtatcaaattgttgttcaaatatcatt 11460972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 38019484 - 38019392
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||||||||| |||||| | || |||||||| |||||||||||   | |||||||||||||||||||||||||||| |||||    
T  38019484 tttttctctctccattatttttgaccaataacaaaagagaaaaagaaggttgtcatcaa-attgtaccaaatggttgttcaaatatcactgctc 38019392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 40605404 - 40605309
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca-aatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| |||||| ||||  |||| |||||||| ||||||||||| ||||||||||| || || |  || |||||||||||||||||||||||||||    
T  40605404 ttttttctctccacattcattttgaccaatgagaagagagaaaaagaaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctc 40605309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 21255767 - 21255673
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgt-accaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||| ||||||||||| | ||||||||| | |  |||| | |||||||||||||||||||||||||||    
T  21255767 tttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctc 21255673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 30530615 - 30530570
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta 66  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||    
T  30530615 acaacttttagacaactttctctctcatactcacattatattttta 30530570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 35043696 - 35043607
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgt-accaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||||||||| |||||| |||||||||||||   |||||||||   | ||||| | ||||||||||||||||||||||||||||    
T  35043696 tctctccattatttttaaccaataaaaagagagaaaaatgaggttgtcatgaaaattgttagcaaatggttgttcaaatatcattgctca 35043607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 33422262 - 33422210
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  33422262 ttacaactttttgacaactttctctctcatactcacattatatttttattctc 33422210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 36930793 - 36930745
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  36930793 aacttttagacaactttctctctcatactcacattatattcttactctc 36930745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 52417559 - 52417611
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  52417559 ttacaactttttgacaactttctctctcatactcacattatatttttattctc 52417611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 45350056 - 45349989
Alignment:
Q  85 accaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattg 152  Q
    ||||||||||||||||| ||  ||| |||||||| ||||||||||||||| ||||| |||| ||||||    
T  45350056 accaatgaaaagagagagaaaaaagattgtcaaaaagattgtaccaaatgattgttaaaatgtcattg 45349989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 16658468 - 16658518
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| ||||||||||||  |||| ||||||||    
T  16658468 acaacttttagacaactttctctctcatactcacattctattcttactctc 16658518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 17526509 - 17526603
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattg-taccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||||||||| |||||| |||||||||||||   || |||||| | | |||| || |||||| ||||||||||||||||||||    
T  17526509 tttttctctctccattatttttgaccaataaaaagagagaaaaatgagattgtcataaaaattgttagcaaatgattgttcaaatatcattgctc 17526603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 25989025 - 25988975
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||| ||||||| |||||||||||| ||||| ||||||||    
T  25989025 acaacttttagacaattttctctctcatactcacattatattcttactctc 25988975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 30687082 - 30687132
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  30687082 acaacttttagacaactttttctatcatactcacattatattcttactctc 30687132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 42299158 - 42299076
Alignment:
Q  74 cattatttttcaccaatgaaaagagagaaaatgaaggttgtc-aaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||||||||| |||||| ||||||||||||| |||| ||||| ||| |  |||||| ||||  ||||||||||||||||||||    
T  42299158 cattatttttgaccaataaaaagagagaaaaagaagattgtcaaaaaatgttgtactaaataattgttcaaatatcattgctc 42299076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 9987992 - 9988029
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||||||||||||||||| |||||||||||    
T  9987992 gacaactttctctttcatactcacattatatttttact 9988029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 15059675 - 15059759
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaatgaa 108  Q
    |||| ||||||||||||| |||||||||||| |||||||||  ||||| | ||| ||||  || ||||| |||||||||||||||    
T  15059675 tttttgacaactttctctctcatactcacattatatttttattctctctctattgttttggacaaatgagaagagagaaaatgaa 15059759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 5043186 - 5043226
Alignment:
Q  111 ttgtcaaatagattgtaccaaatggttgttcaaatatcatt 151  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  5043186 ttgtcaaataagttgtaccaaatggttgttcaaatatcatt 5043226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 44112482 - 44112534
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||| |||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  44112482 ttacaattttttgacaactttctctctcatactcacattatatttttattctc 44112534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 44641946 - 44641894
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||| |||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  44641946 ttacaattttttgacaactttctctctcatactcacattatatttttattctc 44641894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 47820530 - 47820494
Alignment:
Q  32 acaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||||||||||||||||||| ||||||||    
T  47820530 acaactttctctttcatactcacatcatttttttact 47820494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 9445138 - 9445173
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacat 56  Q
    ||||||||| ||||||||||||||||||||||||||    
T  9445138 acaactttttgacaactttctctttcatactcacat 9445173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 12999863 - 12999816
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||  |||||||||||| |||||||||||| |||||||||||    
T  12999863 acaacttttgtacaactttctctctcatactcacattatatttttact 12999816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 21255826 - 21255779
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| |||||    
T  21255826 acaacttttagacaactttttctctcatactcacattatattcttact 21255779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 32216037 - 32216076
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatattttt 65  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  32216037 ttttagacaactttctctctcatactcacattatattttt 32216076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 34187353 - 34187440
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| |||||  |||| ||||||||||||||||||||   | ||||||| ||| |||||  || ||||||||||||||||||    
T  34187353 tttttctctctccattgattttgaccaatgaaaagagagaaaagagaagttgtcacataaattgtctcacatggttgttcaaatatca 34187440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 34941961 - 34941914
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    |||| |||||||||||||||||| |||||||||||| ||||| |||||    
T  34941961 acaatttttagacaactttctctctcatactcacattatattcttact 34941914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 39815375 - 39815426
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| ||||||||||||| |||||||||||| ||||| ||| ||||    
T  39815375 tacaacttttggacaactttctctctcatactcacattatattcttattctc 39815426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 8464495 - 8464441
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca 116  Q
    |||| ||||| ||||||||||  |||||| ||||||||||||||||| |||||||    
T  8464495 tttttctctctccattattttggaccaataaaaagagagaaaatgaaagttgtca 8464441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 12717665 - 12717715
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||| ||||| |||||||||||||||||||| || |||||| ||||    
T  12717665 acaactttttgacaattttctctttcatactcacattatgtttttattctc 12717715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 14002724 - 14002682
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||    
T  14002724 tttttctctctccattatttttaaccaatgaaaagagagaaaa 14002682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 25702256 - 25702206
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||| ||||||||||| ||| |||||||||||| ||||| ||||||||    
T  25702256 acaacttgtagacaactttatctctcatactcacattatattcttactctc 25702206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 29254107 - 29254057
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| |||||||||||||||||| |||||||||||| ||||| || |||||    
T  29254107 acaatttttagacaactttctctctcatactcacattatattctttctctc 29254057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 33076149 - 33076195
Alignment:
Q  21 acaactttta-gacaactttctctttcatactcacatcatattttta 66  Q
    |||||||||| ||||||||||||| |||||||||||| |||||||||    
T  33076149 acaacttttatgacaactttctctatcatactcacattatattttta 33076195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 38019543 - 38019505
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatat 61  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  38019543 aacttttagacaactttctccttcatactcacattatat 38019505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 44950462 - 44950412
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||  ||||||||||||||||||||||||| ||||| ||| ||||    
T  44950462 acaactttttaacaactttctctttcatactcacattatattcttaatctc 44950412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 47279687 - 47279733
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacatcatattttta 66  Q
    ||||| |||| |||||||||||||||||||||| ||| |||||||||    
T  47279687 tacaattttttgacaactttctctttcatactcgcattatattttta 47279733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 48325252 - 48325302
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| ||||||| || ||||||| |||||||||||| ||||||||||||||    
T  48325252 acaatttttagataattttctctctcatactcacattatatttttactctc 48325302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 12798588 - 12798625
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  12798588 gacaattttctctttcatactcacattatatttttact 12798625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 25098829 - 25098788
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    |||||||||||||||| |||||| |||||||||||| |||||    
T  25098829 acaacttttagacaaccttctctctcatactcacattatatt 25098788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 30536032 - 30536069
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  30536032 gacaactttctctctcatactcacattatatttttact 30536069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 35846913 - 35846868
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||||||| | |||||||| ||| ||||||||||||||    
T  35846913 ttttagacaactttctatctcatactcgcattatatttttactctc 35846868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 152
Target Start/End: Original strand, 51571668 - 51571697
Alignment:
Q  123 ttgtaccaaatggttgttcaaatatcattg 152  Q
    ||||||||||||||||||||||||||||||    
T  51571668 ttgtaccaaatggttgttcaaatatcattg 51571697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 52437535 - 52437572
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  52437535 gacaactttctctctcatactcacattatatttttact 52437572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 6396356 - 6396392
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    ||||||||||  |||||||||||||||||||||||||    
T  6396356 tacaacttttgtacaactttctctttcatactcacat 6396392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 7645523 - 7645449
Alignment:
Q  73 ccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||| ||||| |||||||||||||||||||| ||| ||||| ||| | |||||  ||||||| |||||||||||||    
T  7645523 ccattgtttttgaccaatgaaaagagagaaaa-gaa-gttgttaaaaaaattgtctcaaatggatgttcaaatatca 7645449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 8464556 - 8464504
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||| ||||||| |||||||||||| ||||| ||| ||||    
T  8464556 ttacaactttttgacaattttctctctcatactcacattatattcttattctc 8464504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 24158679 - 24158715
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  24158679 tacaacttttatacaactttatctttcatactcacat 24158715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 24775003 - 24775055
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||| ||||||  |||||||||||| ||||| ||||||||    
T  24775003 ttacaactttttgacaattttctcactcatactcacattatattcttactctc 24775055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 25302627 - 25302539
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatg-gttgttcaaatatca 149  Q
    |||| ||||| | ||| ||||| ||||||||||||||||||||  || ||||||| ||| |||||   ||||| |||||||||||||||    
T  25302627 tttttctctctctattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacataaattgtctaaaatgagttgttcaaatatca 25302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 40139155 - 40139195
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||| |||||||||||| ||||||||| ||||    
T  40139155 gacaactttctctctcatactcacattatatttttattctc 40139195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 40596085 - 40596045
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||| |||||||||||| ||||| ||||||||    
T  40596085 gacaactttctctctcatactcacattatattcttactctc 40596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 44789172 - 44789140
Alignment:
Q  32 acaactttctctttcatactcacatcatatttt 64  Q
    |||||||||||||||||||||||||||| ||||    
T  44789172 acaactttctctttcatactcacatcatttttt 44789140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 45470883 - 45470831
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||| |||| ||||||||||||| ||||| |||||| ||||||||| ||||    
T  45470883 ttacaattttttgacaactttctctctcatattcacattatatttttattctc 45470831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 49596263 - 49596315
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||| |||| ||||||||||||| |||||||||||| ||||| ||| ||||    
T  49596263 ttacaattttttgacaactttctctctcatactcacattatattcttattctc 49596315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 51168807 - 51168759
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||| ||| ||||| |||||| ||||| ||||||||    
T  51168807 aacttttagacaactttttctctcatattcacattatattcttactctc 51168759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 46567018 - 46567111
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46567018 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctc 46567111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 12638918 - 12639002
Alignment:
Q  67 ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcatt 151  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  12638918 ctctctccattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaacaaatagttgttcaaatatcatt 12639002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 28676130 - 28676042
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| |||||||||||||||||||| ||||||||||||| || |||||| ||||||||||| |||||||||||||||    
T  28676130 tctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaaaaggttgtacaaaatggttgtttaaatatcattgctca 28676042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 16508960 - 16508870
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcatt 151  Q
    ||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||||| ||||    
T  16508960 ttttttctctctctattatttttgaccaatgaaaagagagaaaatgaaggttgtcaagtaggttgtaccaaattattgttcaaatagcatt 16508870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 54801085 - 54801179
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaa-tgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||||||||| |||||| |||||||| |||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  54801085 tttttctctctccattatttttgaccaataaaaagagaaaaaaatgaaggttgtcaaataaattgtaccaaataattgttcaaatatcattgctc 54801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 33438134 - 33438228
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| | ||| ||||| |||||| ||||||||||||||||||||| ||||| |  |||||||||||||||||| |||||||||||||||    
T  33438134 tttttctctctctattgtttttgaccaataaaaagagagaaaatgaaggttatcaaaaaagttgtaccaaatggttgtttaaatatcattgctca 33438228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 40847457 - 40847550
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    ||||| ||||| ||||| ||||| ||||||||||||||| |||  ||||||||||||| || ||||  ||||||||||||||||||||||||||||    
T  40847457 ttttttctctctccattgttttttaccaatgaaaagagaaaaa--gaaggttgtcaaaaaggttgtgtcaaatggttgttcaaatatcattgctca 40847550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 26440752 - 26440842
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattg 152  Q
    |||| ||||| ||||| ||||| |||||| |||| | ||||||| |||||||||||||||||||||| ||||| || ||||||||||||||    
T  26440752 tttttctctctccattgtttttgaccaataaaaaaaaagaaaataaaggttgtcaaatagattgtacaaaatgattcttcaaatatcattg 26440842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 155
Target Start/End: Original strand, 55510959 - 55511041
Alignment:
Q  73 ccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| ||||| |||| |||||| |||||||| ||| ||| |||||||  |||||||||||||||||||||||||||||||||    
T  55510959 ccattgtttttgaccattgaaaatagagaaaaggaaagttttcaaataagttgtaccaaatggttgttcaaatatcattgctc 55511041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 37977204 - 37977297
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||||||||| || ||||||||||||||||   ||  |||||||| |  |||||||||||||||||||||||||||||||||    
T  37977204 tttttctctctccattattttttactaatgaaaagagagaaagaaaaaattgtcaaaaatgttgtaccaaatggttgttcaaatatcattgctc 37977297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 42853969 - 42854019
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  42853969 acaacttttagacaactttctctatcatactcacattatatttttactctc 42854019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 18874963 - 18874913
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  18874963 acaacttttagacaactttctctctcatactcacattatattcttactctc 18874913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 23094465 - 23094558
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| |||||||| || |||||| | || |||||||| |||||||| ||   | |||||||||||||||||||||||||||||||||||    
T  23094465 tttttctctctccattattattgaccaataacaaaagagaaaaagaaggttgccatcaa-attgtaccaaatggttgttcaaatatcattgctca 23094558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 52456968 - 52456918
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||||||||||    
T  52456968 acaacttttagacaattttctctctcatactcacattatatttttactctc 52456918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 11997784 - 11997828
Alignment:
Q  107 aaggttgtcaaatagattgtaccaaatggttgttcaaatatcatt 151  Q
    |||| |||||||||| |||||||||||||||||||||||||||||    
T  11997784 aaggatgtcaaataggttgtaccaaatggttgttcaaatatcatt 11997828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 23837076 - 23836988
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| || ||| ||||||||||||| |||  || |||||||  |||||||||||| ||||| |||||||||||||||    
T  23837076 tctctccattgtttttgactaattaaaagagagaaaaagaaaattatcaaataagttgtaccaaatgattgtttaaatatcattgctca 23836988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 18874906 - 18874812
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca-aatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||| ||||||||||| | ||||||||| || || |  || |||||| ||||||||||||||||||||    
T  18874906 tttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctc 18874812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 25725735 - 25725685
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||| |||||||||||||||||||||||||| || |||||| ||||    
T  25725735 acaactttttgacaactttctctttcatactcacattatgtttttattctc 25725685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 44272851 - 44272801
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| |||||||||||| |||||||||||| ||||| ||||||||    
T  44272851 acaacttttaaacaactttctctctcatactcacattatattcttactctc 44272801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 32621767 - 32621800
Alignment:
Q  123 ttgtaccaaatggttgttcaaatatcattgctca 156  Q
    ||||||||||||||||||||||||||||||||||    
T  32621767 ttgtaccaaatggttgttcaaatatcattgctca 32621800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 46566959 - 46567000
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  46566959 acaacttttagacaactttctctctcatactcacattatatt 46567000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 51389405 - 51389498
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| || |||||||||||||||||   | ||||||| | |  ||||| ||||||||||||||||||||| |||||    
T  51389405 tttttctctctccattgttttttactaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactgctc 51389498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 17363258 - 17363310
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||| ||| ||||    
T  17363258 ttacaactttttgacaactttctctctcatactcacattatattcttattctc 17363310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 23094408 - 23094456
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||||||| | |||| ||||| ||||||||    
T  23094408 aacttttagacaactttctctttcatatttacattatattcttactctc 23094456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 28676183 - 28676143
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  28676183 gacaactttctctttcatactcacattatattcttactctc 28676143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 41010092 - 41010060
Alignment:
Q  123 ttgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||||||||||||||||||||||||||||||||    
T  41010092 ttgtaccaaatggttgttcaaatatcattgctc 41010060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 45274293 - 45274345
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||| ||| ||||    
T  45274293 ttacaactttttgacaactttctctctcatactcacattatattgttattctc 45274345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 36081828 - 36081879
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| ||||||||||||| |||||||||||| ||||| ||| ||||    
T  36081828 tacaacttttggacaactttctctctcatactcacattatattcttattctc 36081879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 95
Target Start/End: Complemental strand, 37380313 - 37380278
Alignment:
Q  60 atttttactctccccattatttttcaccaatgaaaa 95  Q
    |||||||||||||||||||||||| |||||||||||    
T  37380313 atttttactctccccattatttttaaccaatgaaaa 37380278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 41170802 - 41170852
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  41170802 tacaactttt-gacaactttctctctcatactcacattatatttttattctc 41170852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 154
Target Start/End: Original strand, 48783944 - 48783975
Alignment:
Q  123 ttgtaccaaatggttgttcaaatatcattgct 154  Q
    ||||||||||||||||||||||||||||||||    
T  48783944 ttgtaccaaatggttgttcaaatatcattgct 48783975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 53781879 - 53781828
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| |||| |||||||||||||||||||| || |||||| ||||    
T  53781879 tacaacttttatacaattttctctttcatactcacattatctttttagtctc 53781828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 5622485 - 5622535
Alignment:
Q  19 ttacaactttta-gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||  |||||||||||||||||||||||||| || ||||||||    
T  5622485 ttacaacttttgtgacaactttctctttcatactcacattatctttttact 5622535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 6239415 - 6239496
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaat 105  Q
    |||| ||||||||||||| ||||| ||||||||| ||||||   |||| | ||||||||| |||||| |||| |||||||||    
T  6239415 tttttgacaactttctctctcatattcacatcatgtttttattttctctctattatttttgaccaataaaaatagagaaaat 6239496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 7795137 - 7795183
Alignment:
Q  110 gttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    ||||||| | || ||||| ||||||||||||||||||||||||||||    
T  7795137 gttgtcataaaggttgtatcaaatggttgttcaaatatcattgctca 7795183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 8455891 - 8455941
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||  |||||||||||| | |||||||||| ||||||||||||||    
T  8455891 acaacttttgaacaactttctctctaatactcacattatatttttactctc 8455941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 12241088 - 12241138
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||| ||||||||||||| |||||||||||| || |||||| ||||    
T  12241088 acaactttttgacaactttctctctcatactcacattatgtttttattctc 12241138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 22071604 - 22071674
Alignment:
Q  79 tttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||| |||||| | ||||||||||| ||| ||||||||| |  ||||||||||||||||| | |||||||    
T  22071604 tttttaaccaataagaagagagaaaaagaaagttgtcaaacaagttgtaccaaatggttgtactaatatca 22071674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 23690320 - 23690362
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||    
T  23690320 tttttctctctccattatttttgaccaatgaaaagagagaaaa 23690362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 33820377 - 33820327
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||| ||||||||||||| |||||||||||| || |||||| ||||    
T  33820377 acaactttttgacaactttctctctcatactcacattatgtttttattctc 33820327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 34027926 - 34027976
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||| | ||||||||||||| ||||||| ||||| ||||||||    
T  34027926 acaacttttagatatctttctctttcattctcacattatattcttactctc 34027976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 35580156 - 35580237
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagag 100  Q
    |||| |||| ||||| ||||| | |||||| ||||| ||||| |||  ||||| ||||||||||| ||||||||||||||||    
T  35580156 acaattttttgacaattttctttctcatacccacattatattcttattctctctccattatttttgaccaatgaaaagagag 35580237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 41609637 - 41609559
Alignment:
Q  79 tttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgt-accaaatggttgttcaaatatcattgctca 156  Q
    ||||| |||||| ||||||||||||| | || |||||| | | ||||| | ||||||||||||||||||||||| ||||    
T  41609637 tttttgaccaattaaaagagagaaaaagtagattgtcacaaaaattgtcatcaaatggttgttcaaatatcattactca 41609559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 50608660 - 50608618
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttact 68  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  50608660 tttttgacaactttctctttcatactcacattatttttttact 50608618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 50721772 - 50721738
Alignment:
Q  34 aactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||||||||||||| |||||||||||    
T  50721772 aactttctctttcatactcacattatatttttact 50721738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 925103 - 925058
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta 66  Q
    ||||||||||||||| ||||||| |||||||||||| | |||||||    
T  925103 acaacttttagacaattttctctctcatactcacatgacattttta 925058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 1580266 - 1580177
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca-aatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||| ||||| ||||| |||||  |||||||||||||||||||  || ||||||| || |  |||||  ||||||||||||||||||||    
T  1580266 ttttttctctctccattgtttttatccaatgaaaagagagaaaaaaaaagttgtcacaaaaagttgtatgaaatggttgttcaaatatca 1580177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 2109472 - 2109509
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||||||||||||||||| || ||||||||    
T  2109472 gacaactttctctttcatactcacattatgtttttact 2109509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 5234447 - 5234366
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||| |||||| |||||||||||||  ||  |||||| | |  ||||| |||||||||||||||||||||    
T  5234447 tctctccattgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaatggttgttcaaatatca 5234366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 12638855 - 12638900
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta 66  Q
    |||| |||||||||||||||||| ||||||||||||  ||||||||    
T  12638855 acaatttttagacaactttctctctcatactcacattttattttta 12638900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 38792920 - 38792883
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  38792920 gacaactttctctctcatactcacattatatttttact 38792883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 41849731 - 41849768
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||||||||||||||||| || ||||||||    
T  41849731 gacaactttctctttcatactcacattatgtttttact 41849768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 43759168 - 43759075
Alignment:
Q  56 tcatatttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||||||||| |||| | ||||||||| || ||| |||||| ||||||  |||||||||| | || |||||| |||  ||||| |||||||||    
T  43759168 tcatatttttattctctctattatttttgacaaatcaaaagatagaaaaacaaggttgtcataaaggttgtacaaaagagttgtacaaatatca 43759075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 44257760 - 44257723
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  44257760 gacaactttctctctcatactcacattatatttttact 44257723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 49585035 - 49585072
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  49585035 gacaactttctctctcatactcacattatatttttact 49585072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 1688471 - 1688419
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||  |||||||||||| |||||||||||| ||||| ||| ||||    
T  1688471 ttacaacttttttacaactttctctctcatactcacattatattcttattctc 1688419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 14090092 - 14090056
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  14090092 tacaacttttaaacaactttctctctcatactcacat 14090056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 16019506 - 16019554
Alignment:
Q  21 acaactttta-gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||| ||||| ||| |||||||||||||||| |||||||||||    
T  16019506 acaacttttatgacaattttttctttcatactcacattatatttttact 16019554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 18880817 - 18880865
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||| ||||||| |||||||||||| ||||| ||| ||||    
T  18880817 aacttttagacaattttctctctcatactcacattatattcttattctc 18880865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 29513738 - 29513702
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  29513738 tacaactttttgacaactttctctctcatactcacat 29513702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 29863583 - 29863631
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||  |||||||||||||||||||| |||| ||||||||| ||||    
T  29863583 aacttttgtacaactttctctttcatacttacattatatttttattctc 29863631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 31048919 - 31048959
Alignment:
Q  22 caacttttagacaactttctctttcatactcacatcatatt 62  Q
    |||||||| ||||||||||||| |||||||||||| |||||    
T  31048919 caactttttgacaactttctctctcatactcacatgatatt 31048959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 31147259 - 31147311
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||| |||| ||||||||||||| ||||| |||||| ||||||||| ||||    
T  31147259 ttacaattttttgacaactttctctctcataatcacattatatttttattctc 31147311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 31275171 - 31275211
Alignment:
Q  16 cagttacaacttttagacaactttctctttcatactcacat 56  Q
    |||| ||||||||| ||||||||||||| ||||||||||||    
T  31275171 cagtgacaactttttgacaactttctctctcatactcacat 31275211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 36123501 - 36123453
Alignment:
Q  21 acaactttta-gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||| ||||||||||||| ||||||| |||| |||||||||||    
T  36123501 acaacttttatgacaactttctctctcatacttacattatatttttact 36123453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 40308476 - 40308512
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatt 62  Q
    |||| |||||||||||||||||||||||||| |||||    
T  40308476 tttttgacaactttctctttcatactcacattatatt 40308512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 42490942 - 42490986
Alignment:
Q  24 acttttagacaactttctctttcatactcacatcatatttttact 68  Q
    |||||| ||||||||||||| |||||||||||| || ||||||||    
T  42490942 actttttgacaactttctctctcatactcacattatgtttttact 42490986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 46911928 - 46911980
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctccc 73  Q
    ||||||||| ||||||||||||| |||||||||||| ||  | ||||||||||    
T  46911928 acaactttttgacaactttctctctcatactcacattattctcttactctccc 46911980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 51224880 - 51224844
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  51224880 tacaactttttgacaactttctctctcatactcacat 51224844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 56025285 - 56025321
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  56025285 tacaactttttgacaactttctctctcatactcacat 56025321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 34942 - 35017
Alignment:
Q  80 ttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34942 ttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctc 35017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 440806 - 440900
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  440806 ttttttctctctccattgttttttaccaatgaaaagagagaaaagaaagattgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 440900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 440748 - 440783
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacat 56  Q
    ||||||||||||||||||||||| ||||||||||||    
T  440748 acaacttttagacaactttctctctcatactcacat 440783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 21443777 - 21443870
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  21443777 tttttctctctccattgtttttgaccaatgaaaagagataaaatgaaggttgtccaatagattgtaccaaatagttgttcaaatatcattgctc 21443870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 8173288 - 8173200
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||| | ||||||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||||||||||||    
T  8173288 tctctccattgtttctgaccaatgaaaagagagaaaagaaaggttgtcaaataggttataccaaatggttgttcaaatatcattgctca 8173200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 32729978 - 32730071
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| | ||| ||||| | |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||||||||    
T  32729978 tttttctctctctattgtttttgatcaatgaaaagagagaaaaagaatgttgtcaaataggttgtaccaaatggttgttcatatatcattgctc 32730071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 16533242 - 16533148
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaa-tggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| ||| |||||||||||| || ||||||| || ||||||||||||||||||||    
T  16533242 tttttctctctccattgttttttaccaatgaaaagagagaaaaggaaagttgtcaaataggttataccaaattgattgttcaaatatcattgctc 16533148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 12044362 - 12044412
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  12044362 acaacttttagacaactttctctctcatactcacattatatttttactctc 12044412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 23653932 - 23653887
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||    
T  23653932 aacttttagacaactttctctctcatactcacattatatttttact 23653887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 3089003 - 3089086
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaa 102  Q
    ||||||||||||||| ||||||| ||| |||||||| ||||| |||  ||||| ||||| ||||| |||||||| |||||||||    
T  3089003 acaacttttagacaattttctctctcacactcacattatattcttactctctctccattgtttttgaccaatgagaagagagaa 3089086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 9188985 - 9188935
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  9188985 acaacttttagacaactttatctctcatactcacattatattcttactctc 9188935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 8173351 - 8173306
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||    
T  8173351 aacttttagacaattttctctttcatattcacattatatttttact 8173306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 12187060 - 12187129
Alignment:
Q  87 caatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| |||| ||||||||||||  || ||||| | |||||| ||||||||||||||||||| ||||||||    
T  12187060 caataaaaatagagaaaatgaaaattatcaaaaatattgtatcaaatggttgttcaaatattattgctca 12187129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 16743302 - 16743257
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||||    
T  16743302 ttttagacaactttctctctcatactcacattatattcttactctc 16743257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 25567414 - 25567381
Alignment:
Q  123 ttgtaccaaatggttgttcaaatatcattgctca 156  Q
    ||||||||||||||||||||||||||||||||||    
T  25567414 ttgtaccaaatggttgttcaaatatcattgctca 25567381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 32644647 - 32644692
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||    
T  32644647 tttttgacaactttctctctcatactcacattatatttttactctc 32644692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 2333393 - 2333445
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| || |||||||||||||||||| |||| ||||||||| ||||    
T  2333393 ttacaactttttgataactttctctttcatacttacattatatttttattctc 2333445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 28965884 - 28965840
Alignment:
Q  18 gttacaacttttagacaactttctctttcatactcacatcatatt 62  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||    
T  28965884 gttacaactttttgacaactttctctctcatactcacatgatatt 28965840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 12177606 - 12177645
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttactct 70  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  12177606 gacaactttctctttcatactcacattatattcttactct 12177645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 20712096 - 20712143
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||||||||||||| |||||| ||||| ||||| |||||    
T  20712096 acaacttttagacaactttctctctcatacgcacattatattcttact 20712143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 34490436 - 34490531
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattg-taccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||||||||| |||||||||||||||||||| | || ||||||   |  ||| || |||||||||||| |||||||||| ||||    
T  34490436 tttttctctctccattatttttgaccaatgaaaagagagaaaaaggagattgtcattgaagttgttagcaaatggttgttaaaatatcattcctca 34490531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 5080611 - 5080561
Alignment:
Q  19 ttacaactttta-gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||  |||||||||||||||||||||||||| || ||||||||    
T  5080611 ttacaacttttgtgacaactttctctttcatactcacattatttttttact 5080561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 25561910 - 25561831
Alignment:
Q  74 cattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||||||||| |||||| | |||||||||||  ||  |||||| | || | ||||||||| |||||||||||||||||||||    
T  25561910 cattatttttgaccaataagaagagagaaaa--aaatttgtcataaaggtggtaccaaatagttgttcaaatatcattgctc 25561831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 26101424 - 26101345
Alignment:
Q  74 cattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||||||||| |||||| | |||||||||||  ||  |||||| | || | ||||||||| |||||||||||||||||||||    
T  26101424 cattatttttgaccaataagaagagagaaaa--aaatttgtcataaaggtggtaccaaatagttgttcaaatatcattgctc 26101345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 11743018 - 11742973
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| ||| ||| |||||||||||| ||||||||||||||    
T  11743018 ttttagacaattttttctctcatactcacattatatttttactctc 11742973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 13423009 - 13423046
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  13423009 gacaactttctctctcatactcacattatatttttact 13423046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 14094941 - 14094982
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    ||||||||| ||||||||||||| |||||||||||| |||||    
T  14094941 acaactttttgacaactttctctctcatactcacattatatt 14094982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 19789119 - 19789082
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacat 56  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  19789119 ttacaactttttgacaactttctctctcatactcacat 19789082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 32729919 - 32729960
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    |||||||||| |||||||||||| |||||||||||| |||||    
T  32729919 acaacttttatacaactttctctctcatactcacattatatt 32729960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 34490377 - 34490426
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactct 70  Q
    |||| |||||||||| ||||||| |||||||||||| ||||| |||||||    
T  34490377 acaatttttagacaattttctctctcatactcacattatattcttactct 34490426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 9200143 - 9200179
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatt 62  Q
    |||| |||||||||||||||||||||||||| |||||    
T  9200143 tttttgacaactttctctttcatactcacattatatt 9200179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 12427265 - 12427185
Alignment:
Q  24 acttttagacaactttctctttcatactcacatcatatttttactctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    |||||| ||||||||||||||||||||||| || |||  |||| ||||  ||||  |||  |||||| |||||||||||||    
T  12427265 acttttcgacaactttctctttcatactcatattatacatttattctcttcattgatttaaaccaataaaaagagagaaaa 12427185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 16337952 - 16337916
Alignment:
Q  32 acaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||| |||||||||||| |||||||||||    
T  16337952 acaactttctctctcatactcacattatatttttact 16337916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 23633362 - 23633314
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||| ||||||||||||| |||||||||||| ||||| ||| ||||    
T  23633362 aactttttgacaactttctctctcatactcacattatattcttattctc 23633314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 25924906 - 25924870
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  25924906 tacaactttttgacaactttctctctcatactcacat 25924870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 32853127 - 32853039
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||| ||||| | ||| ||||| ||||||||||| ||||||||   | ||||||| | | |||||| ||||| |||||||||||||||    
T  32853127 ttttttctctctcaattgtttttaaccaatgaaaaaagagaaaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatca 32853039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 33421802 - 33421834
Alignment:
Q  32 acaactttctctttcatactcacatcatatttt 64  Q
    |||||||||||||||||||||||||||| ||||    
T  33421802 acaactttctctttcatactcacatcatttttt 33421834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 5167724 - 5167633
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgc 153  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  5167724 tttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaagtaggttataccaaatggttgttcaaatatcattgc 5167633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 40951279 - 40951372
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  40951279 tttttctctctccattgttttttaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtacctaatggttgttcatatatcattgctc 40951372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 4842502 - 4842407
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    ||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||    
T  4842502 ttttttctctctccattgtttttgaccaatgaaaaaagagaaaatgaaggttgtcaaataggttgtatcaaatggtagttcatatatcattgctca 4842407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 30856907 - 30856986
Alignment:
Q  73 ccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattg 152  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  30856907 ccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaataaattgtaccaaatggttgttcatatatcattg 30856986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 13553231 - 13553316
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaata 146  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||    
T  13553231 ttttttctctctccattatttttgaccaatgaaaagagagaaaagaaagattgtcaaataggttgtaccaaatggttgttcaaata 13553316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 19668158 - 19668078
Alignment:
Q  73 ccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgc 153  Q
    ||||| ||||| |||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  19668158 ccattgtttttgaccaatgaaaagagagaaaaggaaggttatcaaataggttgtatcaaatggttgttcaaatatcattgc 19668078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 15283214 - 15283138
Alignment:
Q  79 tttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    ||||| |||||| |||| |||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  15283214 tttttgaccaataaaaaaagagaaaaggaaggttgtcaaataaattgtacgaaatggttattcaaatatcattgctc 15283138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 21805750 - 21805675
Alignment:
Q  80 ttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| |||||||  ||||||||| | ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  21805750 ttttgaccaatgggaagagagaataagaaggttgtcaaaaagattgtaccaaatggttgttaaaatatcattgctc 21805675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 148
Target Start/End: Original strand, 10288241 - 10288327
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatc 148  Q
    |||| ||||| || || ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||    
T  10288241 tttttctctctccgttgtttttgaccaatgaaaagagagaaaaggaagattgtcaaatagattgtaccaaataattattcaaatatc 10288327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 36763502 - 36763408
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattg-taccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| || || ||||| |||||||||||||||||||| ||||||||||| | | |||| || |||||||||||||||||||||||||||    
T  36763502 tttttctctctccgttgtttttgaccaatgaaaagagagaaaaagaaggttgtcataaaaattgttaacaaatggttgttcaaatatcattgctc 36763408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 7498034 - 7497982
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  7498034 ttacaactttttgacaactttctctctcatactcacattatatttttattctc 7497982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 30856837 - 30856885
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactc 69  Q
    ||||||||||||||||||||||| |||||||||||| ||||| ||||||    
T  30856837 acaacttttagacaactttctctctcatactcacattatattcttactc 30856885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 35792426 - 35792354
Alignment:
Q  74 cattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaata 146  Q
    |||| ||||| || |||||||||||||| || ||||||||| |||||| |||||  |||||||||||||||||    
T  35792426 cattgtttttgactaatgaaaagagagagaaagaaggttgttaaataggttgtattaaatggttgttcaaata 35792354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 36763563 - 36763515
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  36763563 aacttttatacaactttctctttcatactcacattatattcttactctc 36763515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 23358620 - 23358573
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  23358620 acaacttttagacaactttctctctcatactcacattatattcttact 23358573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 37631349 - 37631254
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgt-accaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||| |||||||| |||||||||||   ||||||||| | |  |||| | ||||||||||||||||||||||||||||    
T  37631349 tttttctctctccattgtttttgaccaatgagaagagagaaaaaagaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctca 37631254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 305902 - 305856
Alignment:
Q  110 gttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    ||||||| | ||||||||||||||| |||||||||||||||||||||    
T  305902 gttgtcataaagattgtaccaaatgattgttcaaatatcattgctca 305856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 8555332 - 8555282
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| |||||||||||||||||| |||||||||||| ||||| ||||||||    
T  8555332 acaatttttagacaactttctctctcatactcacattatattcttactctc 8555282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 3932988 - 3933033
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta 66  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  3932988 acaactttttgacaactatctctttcataatcacatcatattttta 3933033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 4842561 - 4842520
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  4842561 acaacttttagacaactttctctctcatactcacattatatt 4842520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 151
Target Start/End: Original strand, 13553310 - 13553347
Alignment:
Q  114 tcaaatagattgtaccaaatggttgttcaaatatcatt 151  Q
    |||||||| |||||||||||||||||||||||||||||    
T  13553310 tcaaataggttgtaccaaatggttgttcaaatatcatt 13553347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 32128236 - 32128312
Alignment:
Q  79 tttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    ||||| |||||| |||||||||||||  ||  || ||| | |||||||||||||| ||||||||||||||||||||||    
T  32128236 tttttgaccaataaaaagagagaaaaaaaaa-ttatcataaagattgtaccaaatagttgttcaaatatcattgctca 32128312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 546428 - 546376
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||  |||||||||||| |||||||||||| ||||||||| ||||    
T  546428 ttacaactttttaacaactttctctctcatactcacattatatttttattctc 546376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 1352418 - 1352466
Alignment:
Q  21 acaactttta-gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||    
T  1352418 acaacttttatgaaaactttctctttcatactcacattatatttttact 1352466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 8352867 - 8352915
Alignment:
Q  23 aacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||| ||||||| |||||||||||| ||||| ||||||||    
T  8352867 aacttttagacaattttctctctcatactcacattatattcttactctc 8352915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 19637377 - 19637409
Alignment:
Q  123 ttgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||||||||||||||||||||||||||||||||    
T  19637377 ttgtaccaaatggttgttcaaatatcattgctc 19637409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 19835970 - 19836002
Alignment:
Q  123 ttgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||||||||||||||||||||||||||||||||    
T  19835970 ttgtaccaaatggttgttcaaatatcattgctc 19836002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 29449241 - 29449289
Alignment:
Q  21 acaactttta-gacaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||| ||||||||||||| |||||||||||| |||||||||||    
T  29449241 acaacttttatgacaactttctctctcatactcacattatatttttact 29449289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37631410 - 37631358
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||| |||||||||||||||| | |||||||||| ||||| ||||||||    
T  37631410 ttacaactcttagacaactttctctcttatactcacattatattcttactctc 37631358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 42665855 - 42665803
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||| ||| ||||    
T  42665855 ttacaactttttgacaactttctctctcatactcacattatattcttattctc 42665803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 11164358 - 11164271
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||   | ||||||| | |  ||||| ||||| |||||||||||||||    
T  11164358 tttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatca 11164271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 11728163 - 11728112
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||  ||||||||||||||||||||||||| || |||||| ||||    
T  11728163 tacaacttttgtacaactttctctttcatactcacattatgtttttattctc 11728112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 13711150 - 13711237
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||   | ||||||| | |  |||||| |||| |||||||||||||||    
T  13711150 tttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtacaaaatagttgttcaaatatca 13711237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 35965603 - 35965646
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatt 62  Q
    |||||| |||| |||||||||||||||||||||||||| |||||    
T  35965603 ttacaattttttgacaactttctctttcatactcacattatatt 35965646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 37966615 - 37966661
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  37966615 acaactttt-gacaattttctctttcatactcacattatatttttact 37966661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 43514921 - 43514972
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| |||| ||||||||||||||||| || ||||||||| ||||    
T  43514921 tacaacttttatacaattttctctttcatactcatattatatttttattctc 43514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 45515582 - 45515494
Alignment:
Q  61 tttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca--aatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||| ||||| ||||| ||||| |||||||||||||||||||| ||| |||||||  || || |||||  ||||||||||||||||||||    
T  45515582 ttttttctctctccattgtttttaaccaatgaaaagagagaaaaagaa-gttgtcaccaaaag-ttgtatgaaatggttgttcaaatatca 45515494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 1052537 - 1052487
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||||||| ||| ||||| |||||| ||||| ||||||||    
T  1052537 acaacttttagacaactttatctctcatattcacattatattcttactctc 1052487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 4263900 - 4263858
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatttttact 68  Q
    |||| |||||||||||||||||||||||||| ||||| |||||    
T  4263900 tttttgacaactttctctttcatactcacattatattcttact 4263858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 21805827 - 21805777
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||| ||||||| ||||||| |||| ||||| ||||||||    
T  21805827 acaacttttagacaattttctctctcatacttacattatattcttactctc 21805777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 28165159 - 28165209
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||||||| ||||||| |||||||||||| ||||| ||| ||||    
T  28165159 acaacttttagacaattttctctctcatactcacattatattcttaatctc 28165209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 33296112 - 33296027
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    ||||||||| |||||||| |||| |||||||||||| ||  | |||  ||||| | ||| ||||| ||||||||||||||||||||    
T  33296112 acaactttttgacaacttcctctatcatactcacattatcatcttattctctctcaattgtttttaaccaatgaaaagagagaaaa 33296027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 15283291 - 15283250
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    |||| |||||||||||||||||| |||||||||||| |||||    
T  15283291 acaatttttagacaactttctctctcatactcacattatatt 15283250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 40951223 - 40951264
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatt 62  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  40951223 acaacttttagacaactttctcactcatactcacattatatt 40951264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 694358 - 694453
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagaga-aaatgaaggttgtca-aatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    |||| ||||| ||||| ||||| ||||||||||| ||||| |||||| |||||||| || || |  || |||||| |||||||||||||||||||||    
T  694358 tttttctctctccattgtttttgaccaatgaaaaaagagataaatga-ggttgtcataaaagttattagcaaatgattgttcaaatatcattgctca 694453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 6666048 - 6666100
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||  || ||||||||| |||||||||||| ||||||||| ||||    
T  6666048 ttacaacttttttacgactttctctctcatactcacattatatttttattctc 6666100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 6851701 - 6851665
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  6851701 tacaactttttgacaactttctctctcatactcacat 6851665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 9194459 - 9194503
Alignment:
Q  21 acaactttta-gacaactttctctttcatactcacatcatatttt 64  Q
    |||||||||| ||||||||||||| |||||||||||| |||||||    
T  9194459 acaacttttatgacaactttctctctcatactcacattatatttt 9194503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 10472177 - 10472141
Alignment:
Q  32 acaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||| |||||||||||| |||||||||||    
T  10472177 acaactttctctctcatactcacattatatttttact 10472141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 13104568 - 13104652
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaata 146  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||   | ||||||| | | |||||  || |||||||||||||||    
T  13104568 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaata 13104652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 18619440 - 18619388
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||||||||||| || ||||||||| ||||| ||| ||||    
T  18619440 ttacaactttttgacaactttctctctcgtactcacattatattcttattctc 18619388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 30977919 - 30977963
Alignment:
Q  21 acaactttta-gacaactttctctttcatactcacatcatatttt 64  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||    
T  30977919 acaacttttatgacaactttctctctcatactcacaacatatttt 30977963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 32128168 - 32128212
Alignment:
Q  27 tttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||| ||||||||||||||||||||||||| || |||||| ||||    
T  32128168 tttatacaactttctctttcatactcacattatctttttattctc 32128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 32750087 - 32750171
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaata 146  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||   | ||||||| | | |||||  || |||||||||||||||    
T  32750087 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaata 32750171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 36625129 - 36625165
Alignment:
Q  31 gacaactttctctttcatactcacatcatatttttac 67  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  36625129 gacaactttctctctcatactcacattatatttttac 36625165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 36774568 - 36774616
Alignment:
Q  21 acaactttt-agacaactttctctttcatactcacatcatatttttact 68  Q
    ||||||||| |||||||||||||| ||||| |||||| |||||||||||    
T  36774568 acaacttttgagacaactttctctctcatattcacattatatttttact 36774616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 36795765 - 36795801
Alignment:
Q  26 ttttagacaactttctctttcatactcacatcatatt 62  Q
    |||| |||||||||||||||||||||||||| |||||    
T  36795765 tttttgacaactttctctttcatactcacattatatt 36795801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 39449146 - 39449114
Alignment:
Q  32 acaactttctctttcatactcacatcatatttt 64  Q
    |||||||||||||||||||||||||||| ||||    
T  39449146 acaactttctctttcatactcacatcatttttt 39449114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 40700237 - 40700273
Alignment:
Q  32 acaactttctctttcatactcacatcatatttttact 68  Q
    |||||||||||| |||||||||||| |||||||||||    
T  40700237 acaactttctctctcatactcacattatatttttact 40700273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 42554804 - 42554856
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||  |||||||||||| |||||||||||| ||||| ||| ||||    
T  42554804 ttacaacttttttacaactttctctctcatactcacattatattcttattctc 42554856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 42665771 - 42665707
Alignment:
Q  85 accaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    ||||||||||| |||| ||||||| |||||||   |  ||||||||||||||||| |||||||||    
T  42665771 accaatgaaaaaagagcaaatgaaagttgtcatcaaagttgtaccaaatggttgtacaaatatca 42665707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 16571 - 16482
Alignment:
Q  67 ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    ||||| ||||| ||||| |||||||||| ||||||||| |||| |||||||| |  |||||||||||||||||| |||||||||||||||    
T  16571 ctctctccattgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttgtaccaaatggttgttgaaatatcattgctca 16482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 16635 - 16585
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||||| || ||||||| |||||||||||| ||||| ||||||||    
T  16635 acaacttttagataattttctctctcatactcacattatattcttactctc 16585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 56273 - 56362
Alignment:
Q  67 ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctca 156  Q
    ||||| ||||| ||||| |||||||||| ||||||||| |||| |||||||| |  |||||||||||||||||| |||||||||||||||    
T  56273 ctctctccattgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttgtaccaaatggttgttgaaatatcattgctca 56362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 337207 - 337300
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctc 155  Q
    |||| ||||| ||||| ||||| |||||| |||| |||||||| |||  |||| ||| | ||||||||||||  ||||||||||||||||||||    
T  337207 tttttctctctccattgtttttgaccaataaaaaaagagaaaaagaaaattgtaaaaaatattgtaccaaataattgttcaaatatcattgctc 337300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 15170 - 15084
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||| ||||| ||||||||||| |||||||| ||| ||||||| | |  ||||||||||| |||||||||||||||    
T  15170 tttttctctctccattgtttttaaccaatgaaaaaagagaaaaagaa-gttgtcacaaaagttgtaccaaatagttgttcaaatatca 15084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 36088 - 36178
Alignment:
Q  62 ttttactctccccattatttttcaccaatgaaaagagagaaaatga--aggttgtca-aatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||  |  | ||||||| || |  ||||| |||||||||||||||||||||    
T  36088 tttttctctctccattatttttgaccaatgaaaagagagaaaaaaaacaagttgtcacaaaaagttgtatcaaatggttgttcaaatatca 36178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 5259 - 5309
Alignment:
Q  21 acaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    |||||||||| |||||||||||| ||||||||| || ||||| ||||||||    
T  5259 acaacttttatacaactttctctctcatactcatattatattcttactctc 5309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 2481 - 2432
Alignment:
Q  67 ctctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtca 116  Q
    ||||| ||||||||||| |||||| |||||||||||||| ||| ||||||    
T  2481 ctctctccattatttttgaccaataaaaagagagaaaatcaagattgtca 2432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 18099 - 18179
Alignment:
Q  68 tctccccattatttttcaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatca 149  Q
    |||| ||||| ||||| ||||||||||||||||||||  || ||||||| | |  ||||| ||||| |||||||||||||||    
T  18099 tctctccattgtttttaaccaatgaaaagagagaaaa-aaaagttgtcataaaagttgtatcaaatagttgttcaaatatca 18179  T

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Target: scaffold0172 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 17004 - 17040
Alignment:
Q  20 tacaacttttagacaactttctctttcatactcacat 56  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  17004 tacaactttttgacaactttctctctcatactcacat 17040  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 11248 - 11323
Alignment:
Q  31 gacaactttctctttcatactcacatcatattttta--ctctccccattatttttcaccaatgaaaagagagaaaa 104  Q
    ||||| |||||||  ||||||||||| ||| | |||  ||||| ||||| ||||| ||||||||||||||||||||    
T  11248 gacaattttctctcacatactcacattatactcttattctctctccattgtttttgaccaatgaaaagagagaaaa 11323  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 155934 - 155986
Alignment:
Q  19 ttacaacttttagacaactttctctttcatactcacatcatatttttactctc 71  Q
    ||||||||||| ||||||||||||| || ||||||||| ||||| ||| ||||    
T  155934 ttacaactttttgacaactttctctctcgtactcacattatattcttattctc 155986  T

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