View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9684_low_14 (Length: 330)
Name: NF9684_low_14
Description: NF9684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9684_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 17 - 259
Target Start/End: Original strand, 22326207 - 22326449
Alignment:
| Q |
17 |
attttgaatgtattggatatgtgtttgggttcattctgatccaagttgttgacattcaatttccattgagcaacgtaacccacagatttgacaagatagg |
116 |
Q |
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| T |
22326207 |
attttgaatgtatcggatatgtgtttgggttcattctgatccaagttgttgacattcaatttccattgagcaaggtaacccactgatttgacaagatagg |
22326306 |
T |
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| Q |
117 |
ccattgtttttctttccagttctttctctaaagaaatacaaaaaacagtgtttagttttacaaaaacatagaataaaaacactaaagaatgttatataaa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
22326307 |
ccattgtttttctttccagttctttctctaaagaaatacaaaaaacagtgtttagttttacaaaaacattgaataaaaacactaaagaatgttatataaa |
22326406 |
T |
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| Q |
217 |
tagatcatatagtcgcagattcgcatagtattcagcaacagat |
259 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||| |
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| T |
22326407 |
tagatcatatagtcgcagattcgcatagaattcagcaacagat |
22326449 |
T |
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