View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9686_low_28 (Length: 241)
Name: NF9686_low_28
Description: NF9686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9686_low_28 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 10311130 - 10311354
Alignment:
| Q |
1 |
agaaagacaacttagacaagaaaaagtaattaagctagtaagaaatgtaagatacctgaagtatacacattccaaaagtactacccagaattttttcaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10311130 |
agaaagacaacttagacaagaaaaagtaattaagctagtaagaagtgtaagatacctgaagtatacacattccaaaagtactacccagaattttttcaga |
10311229 |
T |
|
| Q |
101 |
atcctcatacaaacgacgagttatttctttacttttcataaacgatgaaaatggatcagctctatcggggtccaaaagacccctcttcctcaatttttca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10311230 |
atcctcatacaaacgacgagttatttctttacttttcataaacgacgaaaatggatcagctctatcggggtccaaaagacccctcttcctcaatttttca |
10311329 |
T |
|
| Q |
201 |
atctgcttctcatgttccttcatat |
225 |
Q |
| |
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|||||||||||||||| |||||||| |
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| T |
10311330 |
atctgcttctcatgtttcttcatat |
10311354 |
T |
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