View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9688_low_48 (Length: 240)
Name: NF9688_low_48
Description: NF9688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9688_low_48 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 47125430 - 47125641
Alignment:
| Q |
1 |
tttggttaaaaccctccaacggtcagaatcctttacggatagtgttttccaaatagtcaatcctctctagtaaataatcaatattatgagcataagccca |
100 |
Q |
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| T |
47125430 |
tttggttaaaaccctccaacggtcagaatcctttacggatagtgttttccaaatagtcaatcctctctagtaaataatcaatgttatgagcataagccca |
47125529 |
T |
|
| Q |
101 |
aagagaaaggccaatttaaaagattttcctattaggttagagacctatttagctaatacttctcaatgtgagactcctaagtctaacatcaggtctcaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47125530 |
aagagaaaggccaatttaaaagattttcctattaggttagagacctatttagctaatacttctcaatgtgagactcctaagtctaacatcaggtctcaag |
47125629 |
T |
|
| Q |
201 |
atcttgcataat |
212 |
Q |
| |
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|||||||||||| |
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| T |
47125630 |
atcttgcataat |
47125641 |
T |
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