View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9689_low_9 (Length: 314)
Name: NF9689_low_9
Description: NF9689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9689_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 45 - 304
Target Start/End: Original strand, 40218540 - 40218799
Alignment:
| Q |
45 |
aactttttatttgttggttcagaaataggaatactaattttttcttcctccatttgttcaacagggtggagctttttagagcgtgtgtagatcaaaatga |
144 |
Q |
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| T |
40218540 |
aactttttatttgttggttcagaaataggaatactaattttttcttcctccatttgttcaacagggtgaagctttttagagcgtgtgtagatcaaaatga |
40218639 |
T |
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| Q |
145 |
aaggaattggagnnnnnnntaacacaattcaaaacacatttttcttgttttcgttatcctctttgagttgtcatagtcctaatttaattttcatctttat |
244 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40218640 |
aaggaattggagaaaaaaataacacaattcaaaacacatttttcttgttttcgttatcctctttgagttgtcatagtcctaatttaattttcatctttat |
40218739 |
T |
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| Q |
245 |
tactaggtcatagtctatctaccgaagaaagttgacacatgtgcacgtttatgtcctatg |
304 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40218740 |
tactaggtcatagtctatctaccgaagaaagttgacacatgtgcacgtttatgtcctatg |
40218799 |
T |
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