View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9690_low_11 (Length: 325)

Name: NF9690_low_11
Description: NF9690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9690_low_11
NF9690_low_11
[»] chr6 (2 HSPs)
chr6 (17-325)||(27876563-27876871)
chr6 (76-278)||(8481612-8481814)
[»] chr4 (4 HSPs)
chr4 (17-325)||(48699675-48699983)
chr4 (17-325)||(42268058-42268366)
chr4 (17-325)||(30948037-30948345)
chr4 (52-299)||(2001058-2001305)
[»] chr3 (3 HSPs)
chr3 (17-325)||(5821129-5821437)
chr3 (17-325)||(2815117-2815425)
chr3 (23-299)||(42587132-42587408)
[»] chr8 (2 HSPs)
chr8 (17-325)||(9441946-9442254)
chr8 (23-299)||(24596348-24596624)
[»] chr5 (2 HSPs)
chr5 (17-325)||(41720565-41720873)
chr5 (17-325)||(34354165-34354473)
[»] chr2 (1 HSPs)
chr2 (17-325)||(827634-827942)


Alignment Details
Target: chr6 (Bit Score: 293; Significance: 1e-164; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 17 - 325
Target Start/End: Original strand, 27876563 - 27876871
Alignment:
Q  17 acatcacgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 116  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27876563 acatcacgtacacaggacaaccaaacacatgcagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 27876662  T
Q  117 tggtgagcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacg 216  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27876663 tggtgagcgatttattacataacaggcggttttcactgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctagg 27876762  T
Q  217 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27876763 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 27876862  T
Q  317 cgccatcta 325  Q
    |||||||||    
T  27876863 cgccatcta 27876871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 278
Target Start/End: Original strand, 8481612 - 8481814
Alignment:
Q  76 ttccacatctccatcggtgtcttcaaatcaatcgccgttgatggtgagcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttgg 175  Q
    ||||| |||||||||||||| |||||| |||| || ||| |||| || ||||| || |||||||| ||  ||||| | |||| |||| | || |||||||    
T  8481612 ttccaaatctccatcggtgttttcaaaccaattgcagtttatggagatcgattgatcacataacatgccattttcgcagcttttgccaaaaaagacttgg 8481711  T
Q  176 ccattcccgctgttttcagcatagctcttgttctttctacgagagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaa 275  Q
    ||||||| |||||| || ||||| |||||||| | |||| ||||||| ||||||  |||||||| | |||||| || ||||| |||| || ||| |||||    
T  8481712 ccattcctgctgttctctgcataactcttgttttatctaggagagttttattcaatcgctctgctataccattatgttgaggcgtatatggaactgtgaa 8481811  T
Q  276 ttg 278  Q
    |||    
T  8481812 ttg 8481814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 293; Significance: 1e-164; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 17 - 325
Target Start/End: Original strand, 48699675 - 48699983
Alignment:
Q  17 acatcacgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 116  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48699675 acatcacgtacacaggacaaccaaacacatgcagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 48699774  T
Q  117 tggtgagcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacg 216  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  48699775 tggtgagcgatttattacataacaggcggttttcactgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctagg 48699874  T
Q  217 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48699875 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 48699974  T
Q  317 cgccatcta 325  Q
    |||||||||    
T  48699975 cgccatcta 48699983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 17 - 325
Target Start/End: Complemental strand, 42268366 - 42268058
Alignment:
Q  17 acatcacgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 116  Q
    ||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42268366 acatcacatacacaggacaaccaaacacatgcagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 42268267  T
Q  117 tggtgagcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacg 216  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42268266 tggtgagcgatttattacataacaggcggttttcactgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctagg 42268167  T
Q  217 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42268166 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 42268067  T
Q  317 cgccatcta 325  Q
    |||||||||    
T  42268066 cgccatcta 42268058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 17 - 325
Target Start/End: Original strand, 30948037 - 30948345
Alignment:
Q  17 acatcacgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 116  Q
    ||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  30948037 acatcacgtacacaggacaaccaaaaacatgcagagaagaataatctactggctttcctttccacatctccattggtgtcttcaaatcaatcgtcgttga 30948136  T
Q  117 tggtgagcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacg 216  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  30948137 tggtgagcgatttattacataacaggcggttttcactgcttctgcccagaacgacttggccatttccgctgttttcagcatagctcttgttctttctagg 30948236  T
Q  217 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30948237 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 30948336  T
Q  317 cgccatcta 325  Q
    |||||||||    
T  30948337 cgccatcta 30948345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 52 - 299
Target Start/End: Complemental strand, 2001305 - 2001058
Alignment:
Q  52 gaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttgatggtgagcgatttattacataacaggcggttttca 151  Q
    |||||||||||   ||||||||| ||||| |||||||| ||||| |||||| |||| || |||||||| || ||||| || || ||| |||| |||||||    
T  2001305 gaagaataatcaggtggctttccgttccaaatctccattggtgttttcaaaccaattgcggttgatggagatcgattgatcacgtaataggcagttttca 2001206  T
Q  152 ccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacgagagttctattcatccgctctgccacaccattctg 251  Q
    | |||||||||||||| ||||| |||| ||| | |||| ||| ||| ||||||||||| | || ||||||| |||||||||||||||| |||||||||||    
T  2001205 cagcttctgcccagaaagacttagccactcctgttgttctcaacatggctcttgttctatataggagagttatattcatccgctctgctacaccattctg 2001106  T
Q  252 ctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgttt 299  Q
     ||||| ||||||| ||| |||||||| |||  |||||| || |||||    
T  2001105 ttgaggcgtatgtggaactgtgaattgtcttgtaataccttcatgttt 2001058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 289; Significance: 1e-162; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 17 - 325
Target Start/End: Original strand, 5821129 - 5821437
Alignment:
Q  17 acatcacgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 116  Q
    ||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5821129 acatcacatacacaggacaaccaaacacatgcagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 5821228  T
Q  117 tggtgagcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacg 216  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5821229 tggtgagcgatttattacataacaggcggttttcactgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctagg 5821328  T
Q  217 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5821329 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 5821428  T
Q  317 cgccatcta 325  Q
    |||||||||    
T  5821429 cgccatcta 5821437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 17 - 325
Target Start/End: Original strand, 2815117 - 2815425
Alignment:
Q  17 acatcacgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  2815117 acatcacatacacaggacaaccaaacacatgtagagaagaataatctactggctttcctttccacatctccataggagtcttcaaatcaatcaacgttga 2815216  T
Q  117 tggtgagcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacg 216  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2815217 tggtgagcgatttattacataacaggcggttttcactgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctagg 2815316  T
Q  217 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 316  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2815317 agagttatattcatccgctctgccacaccattctgctgaggtgtatgtgcaacagtgaattgccttacaataccctcttgtttacaaaatgctagaaact 2815416  T
Q  317 cgccatcta 325  Q
    || ||||||    
T  2815417 cgtcatcta 2815425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 299
Target Start/End: Complemental strand, 42587408 - 42587132
Alignment:
Q  23 cgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttgatggtga 122  Q
    ||||||||| ||| || ||||| ||||  |||||||||||   ||||||||| ||||| |||||||| ||||| | |||| |||| || |||||||| ||    
T  42587408 cgtacacagtacatccgaacacatgtaaggaagaataatcaggtggctttccgttccaaatctccattggtgtttacaaaccaattgcggttgatggaga 42587309  T
Q  123 gcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacgagagtt 222  Q
     ||||| || || ||||||||||||||||| |||||||||||||| ||||| |||| | | |||||| ||| ||| ||||||||| | |||| |||||||    
T  42587308 tcgattgatcacgtaacaggcggttttcacagcttctgcccagaaagacttagccactactgctgttctcaacatggctcttgttttatctaagagagtt 42587209  T
Q  223 ctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgttt 299  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||| ||| |||||||| |||  ||||||||| |||||    
T  42587208 ctattcatccgctctgctacaccattctgttgaggcgtatgtggaactgtgaattgtcttgtaataccctcatgttt 42587132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 17 - 325
Target Start/End: Original strand, 9441946 - 9442254
Alignment:
Q  17 acatcacgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 116  Q
    ||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9441946 acatcacatacacaggacaaccaaacacatgcagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcaccgttga 9442045  T
Q  117 tggtgagcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacg 216  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9442046 tggtgagcgatttattacataacaggcggttttcactgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctagg 9442145  T
Q  217 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9442146 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 9442245  T
Q  317 cgccatcta 325  Q
    |||||||||    
T  9442246 cgccatcta 9442254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 23 - 299
Target Start/End: Original strand, 24596348 - 24596624
Alignment:
Q  23 cgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttgatggtga 122  Q
    ||||||||| ||| || ||||| ||||  |||||||||||   ||||||||| ||||| |||||||| ||||| |||||| |||| || |||||||  ||    
T  24596348 cgtacacagtacatccgaacacatgtaaggaagaataatcaggtggctttccgttccaaatctccattggtgttttcaaaccaattgcggttgatgtaga 24596447  T
Q  123 gcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacgagagtt 222  Q
     ||||| || || ||| ||||||||||||| |||||||||||||| ||||| |||| |   |||||| ||| ||| |||||| || | | || |||||||    
T  24596448 tcgattgatcacgtaataggcggttttcacagcttctgcccagaaagacttagccactattgctgttctcaacatggctctttttttatttaagagagtt 24596547  T
Q  223 ctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgttt 299  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||| ||| |||||||| |||  ||||||||| |||||    
T  24596548 ctattcatccgctctgctacaccattctgttgaggcgtatgtggaactgtgaattgtcttgtaataccctcatgttt 24596624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 285; Significance: 1e-160; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 17 - 325
Target Start/End: Complemental strand, 41720873 - 41720565
Alignment:
Q  17 acatcacgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 116  Q
    ||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41720873 acatcacgtacacaggacaaccaaaaacatgcagagaagaataatctactggctttcctttccacatctccattggtgtcttcaaatcaatcgccgttga 41720774  T
Q  117 tggtgagcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacg 216  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  41720773 tggtgagcgatttattacataacaggcggttttcactgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctagg 41720674  T
Q  217 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41720673 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 41720574  T
Q  317 cgccatcta 325  Q
    |||||||||    
T  41720573 cgccatcta 41720565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 17 - 325
Target Start/End: Complemental strand, 34354473 - 34354165
Alignment:
Q  17 acatcacgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  34354473 acatcacgtacacaggacaaccaaacacatgtagagaagaataatctactggctttcctttccacatctccattggtgtcttcaaatcaattgtcgttga 34354374  T
Q  117 tggtgagcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacg 216  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  34354373 tggtgagcgatttattacataacaggcggttttcactgcttctgcccagaacgacttggccattcctgctgttttcagcatagctcttgttctttctagg 34354274  T
Q  217 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 316  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34354273 agagttctattcatccgctctgccgcaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 34354174  T
Q  317 cgccatcta 325  Q
    |||||||||    
T  34354173 cgccatcta 34354165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 17 - 325
Target Start/End: Complemental strand, 827942 - 827634
Alignment:
Q  17 acatcacgtacacaggacaaccaaacacttgtagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 116  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  827942 acatcacgtacacaggacaaccaaacacatgcagagaagaataatctactggctttcctttccacatctccatcggtgtcttcaaatcaatcgccgttga 827843  T
Q  117 tggtgagcgatttattacataacaggcggttttcaccgcttctgcccagaacgacttggccattcccgctgttttcagcatagctcttgttctttctacg 216  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  827842 tggtgagcgatttattacataacaggcggttttcactgcttctgcacagaacgacttggccattcccgctgttttcagcataactcttgttctttctagg 827743  T
Q  217 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  827742 agagttctattcatccgctctgccacaccattctgctgaggtgtatgtgcaaccgtgaattgccttacaataccctcttgtttacaaaatgctagaaact 827643  T
Q  317 cgccatcta 325  Q
    |||||||||    
T  827642 cgccatcta 827634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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