View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9690_low_19 (Length: 254)

Name: NF9690_low_19
Description: NF9690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9690_low_19
NF9690_low_19
[»] chr2 (42 HSPs)
chr2 (8-254)||(19456776-19457022)
chr2 (8-254)||(21703519-21703765)
chr2 (20-254)||(27434802-27435036)
chr2 (8-253)||(27392630-27392875)
chr2 (9-254)||(23128924-23129169)
chr2 (9-254)||(28881852-28882097)
chr2 (9-254)||(20837556-20837801)
chr2 (9-254)||(12655180-12655425)
chr2 (9-193)||(37374799-37374983)
chr2 (60-199)||(261178-261317)
chr2 (9-199)||(34279087-34279277)
chr2 (92-199)||(12717018-12717125)
chr2 (60-199)||(13936957-13937096)
chr2 (93-199)||(21677595-21677701)
chr2 (60-199)||(12586490-12586629)
chr2 (92-199)||(31876002-31876109)
chr2 (60-199)||(34286043-34286182)
chr2 (60-199)||(34291103-34291242)
chr2 (92-199)||(34861401-34861508)
chr2 (92-199)||(37686322-37686429)
chr2 (92-199)||(37701587-37701694)
chr2 (60-199)||(37925182-37925321)
chr2 (92-199)||(39889783-39889890)
chr2 (60-199)||(9350407-9350546)
chr2 (92-187)||(16829763-16829858)
chr2 (92-187)||(16891623-16891718)
chr2 (60-199)||(27776896-27777035)
chr2 (60-199)||(27803381-27803520)
chr2 (60-199)||(27816663-27816802)
chr2 (60-199)||(40233188-40233327)
chr2 (9-199)||(11635602-11635792)
chr2 (9-199)||(11641791-11641981)
chr2 (69-199)||(19416912-19417042)
chr2 (93-199)||(22926441-22926547)
chr2 (99-187)||(32049526-32049614)
chr2 (195-254)||(31891683-31891742)
chr2 (60-172)||(39052268-39052380)
chr2 (195-254)||(3784481-3784540)
chr2 (195-254)||(16163426-16163485)
chr2 (195-254)||(27118515-27118574)
chr2 (195-254)||(34156838-34156897)
chr2 (195-254)||(34303658-34303717)
[»] chr3 (57 HSPs)
chr3 (8-254)||(16626913-16627158)
chr3 (8-254)||(18529999-18530245)
chr3 (20-254)||(15893116-15893350)
chr3 (9-254)||(8295578-8295823)
chr3 (9-254)||(8301674-8301919)
chr3 (9-254)||(4797063-4797308)
chr3 (9-254)||(15741492-15741737)
chr3 (9-254)||(18050865-18051110)
chr3 (9-199)||(4721234-4721424)
chr3 (9-199)||(35880369-35880559)
chr3 (9-205)||(29149214-29149410)
chr3 (9-199)||(18330277-18330467)
chr3 (9-199)||(6191919-6192109)
chr3 (9-253)||(8211344-8211588)
chr3 (9-199)||(18277517-18277707)
chr3 (9-199)||(18292818-18293008)
chr3 (9-199)||(18308119-18308309)
chr3 (20-199)||(10395750-10395929)
chr3 (60-199)||(22871339-22871478)
chr3 (60-199)||(22886398-22886537)
chr3 (93-199)||(5466672-5466778)
chr3 (69-199)||(5596831-5596961)
chr3 (9-199)||(7072815-7073005)
chr3 (9-199)||(28116422-28116612)
chr3 (9-199)||(47023056-47023246)
chr3 (92-199)||(18224877-18224984)
chr3 (9-187)||(5013315-5013493)
chr3 (21-199)||(6542939-6543117)
chr3 (92-193)||(4347155-4347256)
chr3 (92-193)||(28020964-28021065)
chr3 (92-187)||(17985433-17985528)
chr3 (60-199)||(18242381-18242520)
chr3 (99-254)||(20065739-20065894)
chr3 (60-199)||(20577327-20577466)
chr3 (57-187)||(7996213-7996343)
chr3 (57-187)||(10642721-10642851)
chr3 (9-199)||(21674296-21674486)
chr3 (69-199)||(36997554-36997684)
chr3 (69-199)||(51781674-51781804)
chr3 (60-199)||(11110826-11110965)
chr3 (93-199)||(4416603-4416709)
chr3 (69-199)||(24327822-24327952)
chr3 (93-199)||(28338989-28339095)
chr3 (93-199)||(31964938-31965044)
chr3 (93-199)||(50134536-50134642)
chr3 (96-199)||(5609787-5609890)
chr3 (69-199)||(51796762-51796893)
chr3 (123-199)||(29665450-29665526)
chr3 (60-199)||(48465569-48465708)
chr3 (195-254)||(4625736-4625795)
chr3 (195-254)||(5652179-5652238)
chr3 (195-254)||(5713016-5713075)
chr3 (195-254)||(5723926-5723985)
chr3 (195-254)||(5757492-5757551)
chr3 (195-254)||(5768383-5768442)
chr3 (195-254)||(17994191-17994250)
chr3 (170-253)||(22387986-22388069)
[»] scaffold0124 (2 HSPs)
scaffold0124 (8-254)||(20053-20299)
scaffold0124 (9-254)||(30095-30340)
[»] chr4 (24 HSPs)
chr4 (8-254)||(15227529-15227775)
chr4 (10-254)||(15285294-15285538)
chr4 (8-254)||(1899916-1900162)
chr4 (8-253)||(14235895-14236140)
chr4 (9-254)||(14664675-14664920)
chr4 (8-253)||(15391702-15391948)
chr4 (9-254)||(17013657-17013902)
chr4 (9-199)||(24592735-24592925)
chr4 (9-199)||(14763728-14763918)
chr4 (9-199)||(36344936-36345126)
chr4 (9-199)||(6569510-6569700)
chr4 (9-199)||(14098198-14098388)
chr4 (9-199)||(19372918-19373108)
chr4 (92-199)||(31126942-31127049)
chr4 (9-187)||(27163753-27163931)
chr4 (92-199)||(30753482-30753589)
chr4 (60-199)||(54833098-54833237)
chr4 (69-199)||(18801046-18801176)
chr4 (69-199)||(33674234-33674364)
chr4 (21-199)||(40106062-40106240)
chr4 (9-187)||(5005527-5005705)
chr4 (92-187)||(21969441-21969536)
chr4 (60-199)||(39850331-39850470)
chr4 (195-254)||(24460971-24461030)
[»] chr1 (7 HSPs)
chr1 (8-254)||(20460748-20460994)
chr1 (8-253)||(16208395-16208640)
chr1 (9-205)||(41793726-41793922)
chr1 (60-199)||(10962362-10962501)
chr1 (60-199)||(51637910-51638049)
chr1 (69-199)||(28584682-28584812)
chr1 (195-254)||(20340701-20340760)
[»] chr7 (29 HSPs)
chr7 (20-254)||(16040980-16041214)
chr7 (8-254)||(16450250-16450496)
chr7 (9-254)||(16518671-16518916)
chr7 (9-254)||(16503635-16503880)
chr7 (9-254)||(2154216-2154461)
chr7 (9-205)||(10917169-10917365)
chr7 (9-198)||(11425087-11425276)
chr7 (9-199)||(5127635-5127825)
chr7 (9-199)||(31124554-31124744)
chr7 (57-199)||(45387034-45387176)
chr7 (9-199)||(5147650-5147840)
chr7 (9-199)||(24592851-24593041)
chr7 (60-199)||(9618345-9618484)
chr7 (92-199)||(26275404-26275511)
chr7 (93-199)||(4145433-4145539)
chr7 (9-199)||(16736770-16736960)
chr7 (9-199)||(16751824-16752014)
chr7 (9-199)||(17523175-17523365)
chr7 (9-199)||(17529850-17530040)
chr7 (94-199)||(26320179-26320284)
chr7 (92-199)||(3445020-3445127)
chr7 (69-199)||(11441263-11441393)
chr7 (92-199)||(26486054-26486161)
chr7 (60-199)||(26670224-26670363)
chr7 (92-199)||(31564709-31564816)
chr7 (9-193)||(26434900-26435084)
chr7 (60-199)||(26538183-26538322)
chr7 (195-254)||(31088716-31088775)
chr7 (195-254)||(45733292-45733351)
[»] chr5 (49 HSPs)
chr5 (7-254)||(23891855-23892102)
chr5 (8-254)||(25198682-25198928)
chr5 (9-203)||(24951761-24951955)
chr5 (9-254)||(24688423-24688668)
chr5 (9-205)||(30934287-30934483)
chr5 (9-254)||(23752716-23752961)
chr5 (9-254)||(23718254-23718500)
chr5 (9-205)||(11549005-11549201)
chr5 (10-254)||(22999380-22999624)
chr5 (9-199)||(33777138-33777328)
chr5 (9-199)||(15659081-15659271)
chr5 (21-199)||(40473873-40474051)
chr5 (60-205)||(2510753-2510898)
chr5 (60-199)||(9317153-9317292)
chr5 (172-254)||(22888287-22888369)
chr5 (60-199)||(6874004-6874143)
chr5 (92-199)||(12131889-12131996)
chr5 (92-199)||(24681171-24681278)
chr5 (92-199)||(24723698-24723805)
chr5 (92-199)||(37771320-37771427)
chr5 (9-199)||(5637561-5637751)
chr5 (93-199)||(8665796-8665902)
chr5 (57-199)||(15759178-15759320)
chr5 (9-187)||(18375745-18375923)
chr5 (9-187)||(30151669-30151847)
chr5 (21-199)||(37358976-37359154)
chr5 (60-193)||(9548870-9549003)
chr5 (69-193)||(41674420-41674544)
chr5 (60-199)||(18501069-18501208)
chr5 (60-199)||(26480094-26480233)
chr5 (60-187)||(30168171-30168298)
chr5 (60-199)||(31431130-31431269)
chr5 (92-199)||(31826740-31826847)
chr5 (92-199)||(37671813-37671920)
chr5 (60-199)||(37754670-37754809)
chr5 (9-199)||(3789177-3789367)
chr5 (60-205)||(34616223-34616368)
chr5 (92-187)||(33516090-33516185)
chr5 (9-199)||(43077900-43078090)
chr5 (92-205)||(32599784-32599897)
chr5 (60-199)||(13325165-13325304)
chr5 (69-187)||(28648937-28649055)
chr5 (92-198)||(28960120-28960226)
chr5 (69-199)||(29967387-29967517)
chr5 (69-199)||(30029126-30029256)
chr5 (195-254)||(11325634-11325693)
chr5 (195-254)||(13184911-13184970)
chr5 (195-254)||(13440757-13440816)
chr5 (195-254)||(33877087-33877146)
[»] chr8 (22 HSPs)
chr8 (9-254)||(16283091-16283336)
chr8 (8-253)||(22081201-22081446)
chr8 (9-254)||(16277196-16277441)
chr8 (9-254)||(19687740-19687985)
chr8 (9-254)||(2137587-2137832)
chr8 (9-205)||(14557269-14557465)
chr8 (9-205)||(27609282-27609478)
chr8 (9-199)||(18710228-18710418)
chr8 (9-199)||(19674080-19674270)
chr8 (69-199)||(31490133-31490263)
chr8 (93-205)||(31354250-31354362)
chr8 (92-199)||(19208743-19208850)
chr8 (60-199)||(19286158-19286297)
chr8 (60-187)||(28362350-28362477)
chr8 (21-199)||(3329902-3330080)
chr8 (21-199)||(29828967-29829145)
chr8 (60-199)||(19518526-19518665)
chr8 (69-199)||(33258425-33258555)
chr8 (195-254)||(44562932-44562991)
chr8 (9-199)||(12093116-12093306)
chr8 (195-254)||(19659364-19659423)
chr8 (195-254)||(9354453-9354512)
[»] scaffold0089 (3 HSPs)
scaffold0089 (9-254)||(29405-29650)
scaffold0089 (9-254)||(40438-40683)
scaffold0089 (9-205)||(47403-47599)
[»] scaffold0109 (1 HSPs)
scaffold0109 (8-253)||(21208-21453)
[»] scaffold0143 (1 HSPs)
scaffold0143 (9-254)||(26934-27179)
[»] chr6 (41 HSPs)
chr6 (9-254)||(13299263-13299508)
chr6 (9-254)||(24863356-24863601)
chr6 (9-254)||(15424629-15424874)
chr6 (9-205)||(22935238-22935434)
chr6 (9-205)||(23857683-23857879)
chr6 (8-200)||(20160345-20160534)
chr6 (8-200)||(22172297-22172486)
chr6 (9-254)||(26988640-26988885)
chr6 (9-254)||(26999712-26999957)
chr6 (60-205)||(24304979-24305124)
chr6 (60-199)||(26918070-26918209)
chr6 (9-254)||(16749493-16749738)
chr6 (9-199)||(29549117-29549307)
chr6 (166-254)||(22477585-22477673)
chr6 (9-205)||(27044029-27044225)
chr6 (9-199)||(3695702-3695892)
chr6 (9-205)||(17024901-17025097)
chr6 (92-199)||(4525011-4525118)
chr6 (92-199)||(4757483-4757590)
chr6 (60-199)||(4772687-4772826)
chr6 (60-199)||(27007402-27007541)
chr6 (60-199)||(27484807-27484946)
chr6 (92-199)||(29572735-29572842)
chr6 (60-199)||(29501096-29501235)
chr6 (92-187)||(30558395-30558490)
chr6 (60-199)||(34463728-34463867)
chr6 (9-199)||(4546151-4546341)
chr6 (69-199)||(16944394-16944524)
chr6 (9-199)||(28207081-28207271)
chr6 (93-193)||(26778000-26778100)
chr6 (92-199)||(27360377-27360484)
chr6 (92-199)||(27450720-27450827)
chr6 (60-199)||(16673817-16673956)
chr6 (21-199)||(4724510-4724688)
chr6 (92-193)||(26116792-26116893)
chr6 (195-254)||(28162485-28162544)
chr6 (195-254)||(8892619-8892678)
chr6 (195-254)||(13522382-13522441)
chr6 (195-254)||(33374565-33374624)
chr6 (21-202)||(27272947-27273128)
chr6 (21-198)||(27630077-27630254)
[»] scaffold0029 (1 HSPs)
scaffold0029 (9-199)||(554-744)
[»] scaffold0336 (1 HSPs)
scaffold0336 (9-199)||(7874-8064)
[»] scaffold0099 (1 HSPs)
scaffold0099 (9-203)||(48568-48769)
[»] scaffold0144 (1 HSPs)
scaffold0144 (9-199)||(26626-26816)
[»] scaffold0350 (1 HSPs)
scaffold0350 (92-199)||(7663-7770)
[»] scaffold0237 (1 HSPs)
scaffold0237 (9-187)||(15366-15544)
[»] scaffold0038 (1 HSPs)
scaffold0038 (9-199)||(7579-7769)
[»] scaffold0159 (1 HSPs)
scaffold0159 (96-199)||(9490-9593)
[»] scaffold0415 (1 HSPs)
scaffold0415 (60-199)||(5682-5821)
[»] scaffold0260 (1 HSPs)
scaffold0260 (195-254)||(3024-3083)
[»] scaffold0496 (1 HSPs)
scaffold0496 (159-199)||(157-197)


Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 8 - 254
Target Start/End: Complemental strand, 19457022 - 19456776
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19457022 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 19456923  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19456922 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagt 19456823  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    ||  |||||||||||| ||||||||||||| ||||||||||||||||    
T  19456822 tacctccgtcgtacccatatgcgcaatactttcagcatcctttcttt 19456776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 254
Target Start/End: Complemental strand, 21703765 - 21703519
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||    
T  21703765 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaagagatac 21703666  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21703665 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcctagt 21703566  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    ||  |||||||||||| ||||||| ||||| ||||||||| ||||||    
T  21703565 tacctccgtcgtacccatatgcgccatactctcagcatcccttcttt 21703519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 254
Target Start/End: Complemental strand, 27435036 - 27434802
Alignment:
Q  20 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 119  Q
    |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| |||| ||||||||| |  ||||||||||||||||| |||||||| ||     
T  27435036 catgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacac 27434937  T
Q  120 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgt 219  Q
    || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |   ||||||||    
T  27434936 cacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcgt 27434837  T
Q  220 acccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||| |||||||  |||| ||||||||||||||||    
T  27434836 acccatatgcgccgtactctcagcatcctttcttt 27434802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 8 - 253
Target Start/End: Original strand, 27392630 - 27392875
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || ||||||| ||||||||| ||||||||||||| || |||     
T  27392630 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtat 27392729  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||  |||||||||||||||| ||  ||||||| |||     
T  27392730 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatctgtggctactgttgcccccatcgatgctgctcagc 27392829  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttctt 253  Q
    ||  |||  |||||| |||   |||||||| |||||||||||||||    
T  27392830 tacctccaccgtaccagtacatgcaatactctcagcatcctttctt 27392875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 23129169 - 23128924
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  23129169 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 23129070  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    ||||||| || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  23129069 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 23128970  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||||||||||||||||    
T  23128969 gcctccgtcatacccatatgcgccgtattctcagcatcctttcttt 23128924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 28881852 - 28882097
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||| |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  28881852 gagatggtcaccatgggaactcgtctggaagaagctgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 28881951  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  28881952 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 28882051  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||| ||  || | ||||||||||||||||    
T  28882052 gcctccgtcatacccatatgtgccgtattctcagcatcctttcttt 28882097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 20837556 - 20837801
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||| | |  ||||||||||||||||| |    
T  20837556 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatccactgtgaatgcatcaaagaggtatg 20837655  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||| ||||| || | |||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  20837656 gtaatggacaccacaagaagaaagaaacggaagtaggaatggtgtcagtcggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 20837755  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||||||||||||||||    
T  20837756 gcatccgtcctacccatatgcgccgtattctcagcatcctttcttt 20837801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 12655180 - 12655425
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| |||| |||| |  ||||||||||||||||| |    
T  12655180 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaaccctctgtgaatgcatcaaagaggtatg 12655279  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||| ||||| || | |||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  12655280 gtaatggacaccacaagaagaaagaaacggaagtaggaatggtgtcagtcggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 12655379  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||||||||||||||||    
T  12655380 gcctccgtcctacccatatgcgccgtattctcagcatcctttcttt 12655425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 37374799 - 37374983
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  37374799 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 37374898  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctat 193  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||||    
T  37374899 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctat 37374983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 261317 - 261178
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  261317 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 261218  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  261217 gagccggtcaatcaatggctactgttgctcctatcaatgc 261178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 34279087 - 34279277
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||| | || |||||||| |    
T  34279087 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatacgtcgaagaggtatg 34279186  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  34279187 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctactgttgctcctatcaatgc 34279277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 12717125 - 12717018
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  12717125 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 12717026  T
Q  192 attaatgc 199  Q
    || |||||    
T  12717025 atcaatgc 12717018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 13937096 - 13936957
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  13937096 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 13936997  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  13936996 gagccggtcaatccatggctactgttgctcctatcaatgc 13936957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 21677701 - 21677595
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||    
T  21677701 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 21677602  T
Q  193 ttaatgc 199  Q
    | |||||    
T  21677601 tcaatgc 21677595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 12586490 - 12586629
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  12586490 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 12586589  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||||||| |||||||||| ||||| |||||    
T  12586590 gagccggtcaatccatgactactgttgctcctatcaatgc 12586629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 31876002 - 31876109
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  31876002 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 31876101  T
Q  192 attaatgc 199  Q
    || |||||    
T  31876102 atcaatgc 31876109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 34286043 - 34286182
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| |||||||||||||| || |  |    
T  34286043 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaggtg 34286142  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  34286143 gagccggtcaatccatggccactgttgctcctatcaatgc 34286182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 34291103 - 34291242
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| |||||||||||||| || |  |    
T  34291103 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaggtg 34291202  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  34291203 gagccggtcaatccatggccactgttgctcctatcaatgc 34291242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 34861401 - 34861508
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  34861401 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 34861500  T
Q  192 attaatgc 199  Q
    || |||||    
T  34861501 atcaatgc 34861508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 37686429 - 37686322
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  37686429 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 37686330  T
Q  192 attaatgc 199  Q
    || |||||    
T  37686329 atcaatgc 37686322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 37701694 - 37701587
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  37701694 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 37701595  T
Q  192 attaatgc 199  Q
    || |||||    
T  37701594 atcaatgc 37701587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 37925182 - 37925321
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  37925182 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37925281  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  37925282 gagccggtcaatcaatggctactgttgctcctatcaatgc 37925321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 39889783 - 39889890
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||| |||||||| |||    
T  39889783 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggccactgttgctcct 39889882  T
Q  192 attaatgc 199  Q
    || |||||    
T  39889883 atcaatgc 39889890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 9350546 - 9350407
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  9350546 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9350447  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  9350446 gagccggtcaatcaatgactactgttgctcctatcaatgc 9350407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 16829858 - 16829763
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  16829858 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 16829763  T

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Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 16891623 - 16891718
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  16891623 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 16891718  T

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Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 27776896 - 27777035
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27776896 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27776995  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  27776996 gagccggtcaatcaatgactactgttgctcctatcaatgc 27777035  T

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Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 27803381 - 27803520
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27803381 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27803480  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  27803481 gagccggtcaatcaatgactactgttgctcctatcaatgc 27803520  T

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Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 27816663 - 27816802
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27816663 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27816762  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  27816763 gagccggtcaatcaatgactactgttgctcctatcaatgc 27816802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 40233188 - 40233327
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  40233188 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 40233287  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  40233288 gagccggtcaatcaatggctaccgttgctcctatcaatgc 40233327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 11635792 - 11635602
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| |  |||||||| |    
T  11635792 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgttgaagaggtatg 11635693  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||| | ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  11635692 gtaatggacaccacaagaagaaagaagcggaagtggggatggtgtcagcaggagccggtcaatccatggctaccgttgctcctatcaatgc 11635602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 11641981 - 11641791
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| |  |||||||| |    
T  11641981 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgttgaagaggtatg 11641882  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||| | ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  11641881 gtaatggacaccacaagaagaaagaagcggaagtggggatggtgtcagcaggagccggtcaatccatggctaccgttgctcctatcaatgc 11641791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 19417042 - 19416912
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  19417042 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 19416943  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||||||||| ||||| |||||    
T  19416942 aatcaatggctactgttgctcctatcaatgc 19416912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 22926547 - 22926441
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  22926547 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 22926448  T
Q  193 ttaatgc 199  Q
    | |||||    
T  22926447 tcaatgc 22926441  T

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Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 32049526 - 32049614
Alignment:
Q  99 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||||||| ||||| || || || ||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||||||||||||    
T  32049526 aagaggtatggtaatggacaccacaagaaaaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgc 32049614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 31891742 - 31891683
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||||||||||||||||||| ||||||||||||||||    
T  31891742 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttcttt 31891683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 39052380 - 39052268
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  39052380 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 39052281  T
Q  160 gagccggtcaatc 172  Q
    |||||||||||||    
T  39052280 gagccggtcaatc 39052268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 3784481 - 3784540
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  3784481 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 3784540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 16163426 - 16163485
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  16163426 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 16163485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 27118515 - 27118574
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  ||||||||||||| |||||||||||| ||||||||| ||||||    
T  27118515 aatgctgctcagctacctccgtcgtacccgcatgcgcaatactctcagcatcccttcttt 27118574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 34156838 - 34156897
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  34156838 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 34156897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 34303717 - 34303658
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  34303717 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 34303658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 254
Target Start/End: Complemental strand, 16627158 - 16626913
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16627158 tgagatggtcaccatggggactcgcctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 16627059  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16627058 ggtaacggtcatcataagaag-aagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 16626960  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    ||  |||||||||||||||||| ||||||| ||||||||| ||||||    
T  16626959 tacctccgtcgtacccgtatgcacaatactctcagcatcccttcttt 16626913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 18529999 - 18530245
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||    
T  18529999 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaagagatac 18530098  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||    
T  18530099 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggaactagtcaatccatggctactgttacccctattaatgctgcccagt 18530198  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    ||  ||| |||||||||||||||||||||| ||||||||||||||||    
T  18530199 tacctccatcgtacccgtatgcgcaatactctcagcatcctttcttt 18530245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 254
Target Start/End: Complemental strand, 15893350 - 15893116
Alignment:
Q  20 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 119  Q
    |||||| |||||||| ||||||||| |||||||||| || ||||| |||||||||| ||||||||| |  |||||||||||||||||  ||||||| ||     
T  15893350 catgggaactcgtctggaagaagctgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatagtaacggacac 15893251  T
Q  120 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgt 219  Q
    || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||  |   ||||||||    
T  15893250 cacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgctgcccaaatgcctccgtcgt 15893151  T
Q  220 acccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||| |||||||  |||| ||||||||||||||||    
T  15893150 acccatatgcgccgtactctcagcatcctttcttt 15893116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 8295578 - 8295823
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||  || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  8295578 gagatggtcaccatgggaactcgtctggaagaagccgtcaaggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 8295677  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  8295678 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 8295777  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||||||||||||||||    
T  8295778 gcctccgtcatacccatatgcgccgtattctcagcatcctttcttt 8295823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 8301919 - 8301674
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||| ||||||||||| |    
T  8301919 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcgtcaaagaggtatg 8301820  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||  |    
T  8301819 gtaatggacaccacaagaagaaagaaacggaagtatggatggtgtctgccggagccggtcaatccatggctattgttgctcctatcaatgctgcccaaat 8301720  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||||||| | |||||||  || | ||||||||||||||||    
T  8301719 gcctccgtcgtactcatatgcgccgtattctcagcatcctttcttt 8301674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 4797308 - 4797063
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  4797308 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 4797209  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  4797208 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 4797109  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||| ||  || | ||||||||||||||||    
T  4797108 gcctccgtcatacccatatgtgccgtattctcagcatcctttcttt 4797063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 15741737 - 15741492
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  15741737 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 15741638  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    | || || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  15741637 gcaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 15741538  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||| ||  || | ||||||||||||||||    
T  15741537 gcctccgtcatacccatatgtgccgtattctcagcatcctttcttt 15741492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 18050865 - 18051110
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  18050865 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 18050964  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  18050965 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 18051064  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||| ||||||||||||    
T  18051065 gcctccgtcatacccatatgcgccgtattctcaacatcctttcttt 18051110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 4721234 - 4721424
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  4721234 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 4721333  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  4721334 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 4721424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 35880369 - 35880559
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  35880369 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 35880468  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  35880469 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 35880559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 29149410 - 29149214
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  29149410 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 29149311  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  29149310 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactattgctcctatcaatgcagccca 29149214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 18330277 - 18330467
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || |||||  ||||||||| ||||||||| |  |||||||| |||||||| |    
T  18330277 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgctcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18330376  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  18330377 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 18330467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 6191919 - 6192109
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  6191919 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 6192018  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||| ||||||| || |  ||||||||||||||||||||||||||||| ||||| |||||    
T  6192019 gtaatggacaccacaagaagaaagaaacggaagtatggatggtgtcagttggagccggtcaatccatggctactgttgctcctatcaatgc 6192109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 8211344 - 8211588
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||| ||||| || | |||||| |||||||| |    
T  8211344 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgagtcctctgcgagtgcatcgaagaggtatg 8211443  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| || ||  |    
T  8211444 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagctcaaat 8211543  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttctt 253  Q
       |||||| ||||| |||||||  |||| ||||||||| |||||    
T  8211544 gcctccgtcatacccatatgcgccgtactctcagcatccgttctt 8211588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 18277707 - 18277517
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18277707 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18277608  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  18277607 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18277517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 18293008 - 18292818
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18293008 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18292909  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  18292908 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18292818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 18308309 - 18308119
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18308309 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18308210  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  18308209 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18308119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 10395750 - 10395929
Alignment:
Q  20 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 119  Q
    |||||| || ||||| || |||||  |||| || || |||||||| || ||||||| ||||||||| |  |||||||| ||||| || ||||| || ||     
T  10395750 catgggaacccgtcttgaggaagccgtcagggatggaattattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatggtaatggacac 10395849  T
Q  120 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  10395850 cacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 10395929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 22871478 - 22871339
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  22871478 attgtgtttgagaaagctgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 22871379  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  22871378 gagccggtcaatctatggctactgttgcacctatcaatgc 22871339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 22886537 - 22886398
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  22886537 attgtgtttgagaaagctgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 22886438  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  22886437 gagccggtcaatctatggctactgttgcacctatcaatgc 22886398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 5466672 - 5466778
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 192  Q
    |||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| |||||||||||||| ||||    
T  5466672 gcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatctatggctactgttgcaccta 5466771  T
Q  193 ttaatgc 199  Q
    | |||||    
T  5466772 tcaatgc 5466778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 5596961 - 5596831
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||||||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  5596961 gagaaagttgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 5596862  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||| ||||| ||||| |||||    
T  5596861 aatcaatggctaccgttgctcctatcaatgc 5596831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 7072815 - 7073005
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || |||||||| |    
T  7072815 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagaggtatg 7072914  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||| |||||||||||||||||||||| ||||| |||||    
T  7072915 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccagtcaatccatggctactgttgctcctatcaatgc 7073005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 28116612 - 28116422
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || |||||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  28116612 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaattattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 28116513  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  28116512 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 28116422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 47023056 - 47023246
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||||||  |||||||| |  |||||||| |||||||| |    
T  47023056 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagccgaatcctctgtgaatgcatcgaagaggtatg 47023155  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  47023156 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 47023246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 18224877 - 18224984
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||    
T  18224877 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctcct 18224976  T
Q  192 attaatgc 199  Q
    || |||||    
T  18224977 atcaatgc 18224984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 5013315 - 5013493
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  5013315 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 5013414  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  5013415 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 5013493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 6543117 - 6542939
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| ||||| || || |    
T  6543117 atgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacacc 6543018  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  6543017 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgcacctatcaatgc 6542939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 4347256 - 4347155
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  4347256 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgctcct 4347157  T
Q  192 at 193  Q
    ||    
T  4347156 at 4347155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 28020964 - 28021065
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    ||||||||||||||| |||||||| || || |||||||| ||||| ||||| |||||||| || || |||||||| |||||||||||||||||||| |||    
T  28020964 tgcatcaaagaggtatggtaacggacaccacaagaagaaggaaacggaagtggggatggtgtcagctggagccgggcaatccatggctactgttgctcct 28021063  T
Q  192 at 193  Q
    ||    
T  28021064 at 28021065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 17985528 - 17985433
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    ||||||||| ||||||||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  17985528 tgcatcaaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 17985433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 18242381 - 18242520
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || ||||    
T  18242381 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 18242480  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  18242481 gagccggtcaatcaatggctaccgttgctcctatcaatgc 18242520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 254
Target Start/End: Original strand, 20065739 - 20065894
Alignment:
Q  99 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatg 198  Q
    |||||||| ||||| || ||||| ||||||||||| || ||||| |||||||| || || |||||||||||||||||||| |||||||| ||||| ||||    
T  20065739 aagaggtatggtaatggacatcacaagaagaaagatacggaagtggggatggtgtcagctggagccggtcaatccatggccactgttgctcctatcaatg 20065838  T
Q  199 ctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    | |||||  |   |||||| ||||| |||| ||  || | ||||||||||||||||    
T  20065839 cagcccaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttcttt 20065894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 20577466 - 20577327
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  20577466 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 20577367  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  20577366 gagccggtcaatcaatggctactgttgctcctatcaatgc 20577327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 7996213 - 7996343
Alignment:
Q  57 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 156  Q
    |||||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  7996213 attattgtgtttgagaaagctgaatcttctgcgagtgcctcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 7996312  T
Q  157 ccggagccggtcaatccatggctactgttgc 187  Q
    | |||||||||||||| ||||||||||||||    
T  7996313 ctggagccggtcaatcaatggctactgttgc 7996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 10642721 - 10642851
Alignment:
Q  57 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 156  Q
    |||||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  10642721 attattgtgtttgagaaagctgaatcttctgcgagtgcctcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 10642820  T
Q  157 ccggagccggtcaatccatggctactgttgc 187  Q
    | |||||||||||||| ||||||||||||||    
T  10642821 ctggagccggtcaatcaatggctactgttgc 10642851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 21674296 - 21674486
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| ||||| || |    
T  21674296 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatg 21674395  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||| |||||||||| || || ||||| |||||    
T  21674396 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaacccatggctaccgtggctcctatcaatgc 21674486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 36997684 - 36997554
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  36997684 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 36997585  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||| ||||| ||||| |||||    
T  36997584 aatcaatggctaccgttgctcctatcaatgc 36997554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 199
Target Start/End: Original strand, 51781674 - 51781804
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  51781674 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 51781773  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||| ||||| ||||| |||||    
T  51781774 aatcaatggctaccgttgctcctatcaatgc 51781804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 11110965 - 11110826
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||| ||||| ||||| |||||||| || || |    
T  11110965 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaggaaacggaagtggggatggtgtcagctg 11110866  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||||||||||||||||||||| ||||| ||||| |||||    
T  11110865 gagccggtcaatccatggctaccgttgctcctatcaatgc 11110826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 4416603 - 4416709
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||| |||||||||| ||||    
T  4416603 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatgactactgttgctccta 4416702  T
Q  193 ttaatgc 199  Q
    | |||||    
T  4416703 tcaatgc 4416709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 199
Target Start/End: Original strand, 24327822 - 24327952
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  24327822 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 24327921  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||||||||| ||||| |||||    
T  24327922 aatcaatggctactgttgctcctatcaatgc 24327952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 28338989 - 28339095
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  28338989 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 28339088  T
Q  193 ttaatgc 199  Q
    | |||||    
T  28339089 tcaatgc 28339095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 31965044 - 31964938
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  31965044 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 31964945  T
Q  193 ttaatgc 199  Q
    | |||||    
T  31964944 tcaatgc 31964938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 50134642 - 50134536
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  50134642 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 50134543  T
Q  193 ttaatgc 199  Q
    | |||||    
T  50134542 tcaatgc 50134536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 5609890 - 5609787
Alignment:
Q  96 tcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctatta 195  Q
    |||||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||| |    
T  5609890 tcaaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctcctatca 5609791  T
Q  196 atgc 199  Q
    ||||    
T  5609790 atgc 5609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 199
Target Start/End: Original strand, 51796762 - 51796893
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggt-catcataagaagaaagaaacagaagtagggatggtatctgccggagccggt 167  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| ||  || || |||||||||||||| ||||| |||||||| || || |||||||||    
T  51796762 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggcacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggt 51796861  T
Q  168 caatccatggctactgttgcccctattaatgc 199  Q
    ||||| |||||||| ||||| ||||| |||||    
T  51796862 caatcaatggctaccgttgctcctatcaatgc 51796893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 29665526 - 29665450
Alignment:
Q  123 aagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  29665526 aagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 29665450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 48465569 - 48465708
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  48465569 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 48465668  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  48465669 gagccggtcaatcaatagctaccgttgctcctatcaatgc 48465708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 4625736 - 4625795
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  4625736 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 4625795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 5652179 - 5652238
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  5652179 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 5652238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 5713016 - 5713075
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  5713016 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 5713075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 5723926 - 5723985
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  5723926 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 5723985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 5757551 - 5757492
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  5757551 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 5757492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 5768442 - 5768383
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  5768442 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 5768383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 17994250 - 17994191
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  17994250 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 17994191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 22388069 - 22387986
Alignment:
Q  170 atccatggctactgttgcccctattaatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttctt 253  Q
    |||||||||||||||||| ||||| |||||||| |||||    ||||| ||||| ||||| | ||||| ||||||||| |||||    
T  22388069 atccatggctactgttgctcctatcaatgctgctcagtttcccccgtcctacccttatgcaccatactctcagcatccgttctt 22387986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 203; Significance: 1e-111; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 20053 - 20299
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20053 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtgttcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 20152  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20153 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 20252  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    ||  |||||||||||| ||||||| ||||| ||||||||| ||||||    
T  20253 tacctccgtcgtacccatatgcgccatactctcagcatcccttcttt 20299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 30095 - 30340
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| ||||||||||  |||||||| |  |||||||| | |||||| |    
T  30095 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagccgaatcctctgtgaatgcatcgaggaggtatg 30194  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  30195 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 30294  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||||||||| ||||||    
T  30295 gcctccgtcatacccatatgcgccgtattctcagcatcccttcttt 30340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 15227529 - 15227775
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |     
T  15227529 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagatgaatcctccgcaaatgcatcaaagaggcat 15227628  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15227629 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagt 15227728  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    ||  |||||||||||||||||||||||||| ||||||||| ||||||    
T  15227729 tacctccgtcgtacccgtatgcgcaatactctcagcatcccttcttt 15227775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 10 - 254
Target Start/End: Complemental strand, 15285538 - 15285294
Alignment:
Q  10 agatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacgg 109  Q
    |||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15285538 agatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggaacgg 15285439  T
Q  110 taacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtta 209  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15285438 taacggtcatcataagaagaaagaaacagaagtatggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagtta 15285339  T
Q  210 tttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
      ||| | |||||| ||||||||||||| ||||||||||||||||    
T  15285338 cctccattgtacccatatgcgcaatactctcagcatcctttcttt 15285294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 1899916 - 1900162
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  1899916 tgagatggtcaccatggggactcgtttggaagaagctgtcagagaaggcattattgtatttgagaaagttgaatcctctgtaaatgcatcaaagaggtac 1900015  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1900016 ggtaacgatcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 1900115  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    ||  |||||||||||| ||||||| ||||| ||||||||| ||||||    
T  1900116 tacctccgtcgtacccatatgcgccatactctcagcatcccttcttt 1900162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 8 - 253
Target Start/End: Complemental strand, 14236140 - 14235895
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||||| ||||||||| ||||||||||  |||||||| ||||   ||||||||| ||||    
T  14236140 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagaagacattattgtgttcgagaaaggggaatcctctgcaagcacatcaaagaagtac 14236041  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||||||||||| ||||    
T  14236040 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccatggccactgttacccctattaatgctgctcagt 14235941  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttctt 253  Q
    ||  || | |||||| ||||  |||||||| |||||||||||||||    
T  14235940 tacctctgccgtaccagtatatgcaatactctcagcatcctttctt 14235895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 14664675 - 14664920
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| || |||||  | || ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  14664675 gagatggtcaccatgggaactcgtctggaggaagccgttagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 14664774  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||  |    
T  14664775 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagctggtcaatccatggctactgttgctcctatcaatgctgcccaaat 14664874  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| ||||| |  || | ||||||||||||||||    
T  14664875 gcctccgtcatacccatatgcaccgtattctcagcatcctttcttt 14664920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 253
Target Start/End: Complemental strand, 15391948 - 15391702
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || | ||||| ||||||||| ||||||||||||| || |||     
T  15391948 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagatggcattattgtgtttgggaaaggtgaatcctctgcaaatgcatcaaggaagtat 15391849  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactg-ttgcccctattaatgctgcccag 206  Q
    || || |||||||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||||||||||| ||||||| || |||| ||| |||    
T  15391848 ggcaatggtcatcataagaagaaagagacagaagtagggatggtatctgctggaaccagtcaatccatggctactgtttgcccccatcaatgttgctcag 15391749  T
Q  207 ttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttctt 253  Q
     ||  |||| |||| | |||   |||||||| |||||||||||||||    
T  15391748 ctacctccgccgtatcagtacatgcaatactctcagcatcctttctt 15391702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 17013657 - 17013902
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  17013657 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 17013756  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||| ||||| ||||| |||||  |    
T  17013757 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagctggtcaatccatggctactgttgctcctatcaatgcagcccaaat 17013856  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       ||| || ||||| |||||||  || | ||||||||||||||||    
T  17013857 gcctccttcatacccatatgcgccgtattctcagcatcctttcttt 17013902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 24592925 - 24592735
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  24592925 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 24592826  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  24592825 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 24592735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 14763918 - 14763728
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  14763918 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 14763819  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  14763818 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 14763728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 36345126 - 36344936
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  36345126 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 36345027  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  36345026 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 36344936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 6569510 - 6569700
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| || |||||||| ||||| || |    
T  6569510 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgcgaatgcatcgaagagatatg 6569609  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  6569610 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 6569700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 14098198 - 14098388
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| | |||||| || ||||| || |    
T  14098198 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 14098297  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  14098298 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 14098388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 19372918 - 19373108
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| |||||||| |    
T  19372918 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 19373017  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  19373018 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 19373108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 31127049 - 31126942
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||    
T  31127049 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctcct 31126950  T
Q  192 attaatgc 199  Q
    || |||||    
T  31126949 atcaatgc 31126942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 27163931 - 27163753
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  27163931 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 27163832  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  27163831 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 27163753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 30753482 - 30753589
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||| | || || ||||||||||||||||||||||||||||| |||    
T  30753482 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatgatgtcagctggagccggtcaatccatggctactgttgcacct 30753581  T
Q  192 attaatgc 199  Q
    || |||||    
T  30753582 atcaatgc 30753589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 54833098 - 54833237
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  54833098 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 54833197  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  54833198 gagccggtcaatccatggccactgttgctcctatcaatgc 54833237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 18801176 - 18801046
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||||||||| |||||||| || || ||||||||||    
T  18801176 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacagaagtggggatggtgtcagctggagccggtc 18801077  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    || | |||||||||||||| ||||| |||||    
T  18801076 aagctatggctactgttgcacctatcaatgc 18801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 33674364 - 33674234
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  33674364 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 33674265  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||| ||||| ||||| |||||    
T  33674264 aatcaatggctaccgttgctcctatcaatgc 33674234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 40106240 - 40106062
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    |||||||| ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||||||  | || |    
T  40106240 atggggacccgtcttgaggaagcagtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatagacacc 40106141  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  40106140 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 40106062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 5005527 - 5005705
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | | | || |||||||| |    
T  5005527 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtacgtcgaagaggtatg 5005626  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  5005627 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgttgc 5005705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 21969441 - 21969536
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||||| |||||||| ||||| || || || ||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||||||||||||    
T  21969441 tgcatcgaagaggtatggtaatggacaccacaagaaaaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgc 21969536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 39850331 - 39850470
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||| | || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  39850331 attgtgtttgagaaagctgaatcctctgtgaatacgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 39850430  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  39850431 gagccggtcaatcaatggctactgttgcacctatcaatgc 39850470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 24461030 - 24460971
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  24461030 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 24460971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 20460748 - 20460994
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  20460748 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattatattcgagaaagttgaatcctccgccaatgcatcaaagaggtac 20460847  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20460848 ggtaacggtcatcataagaagaaagaaatagaagtagggatggtatctgccggagccggtcaatccatggctactattgcccctattaatgctgcccagt 20460947  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    ||  |||| ||||||||||||||||||||| ||||||||||||||||    
T  20460948 tacctccgccgtacccgtatgcgcaatactctcagcatcctttcttt 20460994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 8 - 253
Target Start/End: Complemental strand, 16208640 - 16208395
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| |||    
T  16208640 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtatttgagaaagttgaatcctctgtaaatgcatcaaagagttac 16208541  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16208540 ggtaacggtcatcataagaagaaagaaacagaagtagagatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 16208441  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttctt 253  Q
    ||  |||| |||| | |||   |||||||| |||||||||||||||    
T  16208440 tacctccgccgtatcagtacatgcaatactctcagcatcctttctt 16208395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 41793922 - 41793726
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||| |||| |  | ||||||||||||||| |    
T  41793922 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatgggatcattgtgtttgagaaagctgaaacctctgtgagtgcatcaaagaggtatg 41793823  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| ||||| || |||||||| || ||||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  41793822 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgcagccca 41793726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 10962362 - 10962501
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  10962362 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 10962461  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  10962462 gagccggtcaatcaatggctactgttgctcctatcaatgc 10962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 51637910 - 51638049
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  51637910 attgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 51638009  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  51638010 gagccggtcaatcaatggctactgttgctcctatcaatgc 51638049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 199
Target Start/End: Original strand, 28584682 - 28584812
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  28584682 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 28584781  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||||||||| ||||| |||||    
T  28584782 aatcaatggctactgttgctcctatcaatgc 28584812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 20340760 - 20340701
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  ||||||||||||||| |||||||||| ||||||||| ||||||    
T  20340760 aatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttcttt 20340701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 20 - 254
Target Start/End: Original strand, 16040980 - 16041214
Alignment:
Q  20 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 119  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  16040980 catgggaactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgtaaatgcatcaaagaggtatggtaacggtcat 16041079  T
Q  120 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  16041080 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgt 16041179  T
Q  220 acccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||| ||||||| ||||| ||||||||| ||||||    
T  16041180 acccatatgcgccatactctcagcatcccttcttt 16041214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 254
Target Start/End: Complemental strand, 16450496 - 16450250
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| || |||    
T  16450496 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaaaagatac 16450397  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16450396 ggtaacggtcatcataagaagaaagaaacaaaagtagggatggtatctgccggagccggtcaatccatagctactgttgcccctattaatgctgcccagt 16450297  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    ||  ||||||||||||||| ||||| |||| ||||||||| ||||||    
T  16450296 tacctccgtcgtacccgtacgcgcagtactctcagcatcccttcttt 16450250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 16518916 - 16518671
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| |||| ||||||||| | |||||||||||||||||| |    
T  16518916 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtaaatgcatcaaagaggtatg 16518817  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |    
T  16518816 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaat 16518717  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  |||| ||||||||||||||||    
T  16518716 gcctccgtcatacccatatgcgccgtactctcagcatcctttcttt 16518671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 16503880 - 16503635
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| |||| ||||||||| |  ||||||||||||||||| |    
T  16503880 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatg 16503781  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |    
T  16503780 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaat 16503681  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  |||| ||||||||||||||||    
T  16503680 gcctccgtcatacccatatgcgccgtactctcagcatcctttcttt 16503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 2154216 - 2154461
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || |  || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  2154216 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatgaaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 2154315  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  2154316 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 2154415  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||| ||  || | ||||||||||||||||    
T  2154416 gcctccgtcatacccatatgtgccgtattctcagcatcctttcttt 2154461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 10917365 - 10917169
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  | || || |  || ||||| || ||||||| ||||||||| |  ||||||||||||||||| |    
T  10917365 gagatggtcaccatgggaactcgtctggaagaagccgttagggatgaaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 10917266  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  10917265 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 10917169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 11425276 - 11425087
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  11425276 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 11425177  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatg 198  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||    
T  11425176 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatg 11425087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 5127635 - 5127825
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||| ||||| |  |||||||| |||||||| |    
T  5127635 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgagtcctctgtgaatgcatcgaagaggtatg 5127734  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  5127735 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 5127825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 31124554 - 31124744
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| || |||||||| ||||| || |    
T  31124554 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgcgaatgcatcgaagagatatg 31124653  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  31124654 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 31124744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 45387034 - 45387176
Alignment:
Q  57 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 156  Q
    |||||||| || ||||||| |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| |    
T  45387034 attattgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcag 45387133  T
Q  157 ccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    | |||||||||||||| |||||||||||||| ||||| |||||    
T  45387134 ctggagccggtcaatcaatggctactgttgctcctatcaatgc 45387176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 5147840 - 5147650
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || |||||||| |||||||| |    
T  5147840 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatgggatcattgtgtttgagaaagctgaatcttctgcgaatgcatcgaagaggtatg 5147741  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||  |||| ||||| |||||    
T  5147740 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccattgctcctatcaatgc 5147650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 24593041 - 24592851
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| | |||||| || ||||| || |    
T  24593041 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 24592942  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  24592941 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 24592851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 9618345 - 9618484
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  9618345 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 9618444  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  9618445 gagccggtcaatcaatggctactgttgctcctatcaatgc 9618484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 26275511 - 26275404
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  26275511 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 26275412  T
Q  192 attaatgc 199  Q
    || |||||    
T  26275411 atcaatgc 26275404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 4145539 - 4145433
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||    
T  4145539 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 4145440  T
Q  193 ttaatgc 199  Q
    | |||||    
T  4145439 tcaatgc 4145433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 16736960 - 16736770
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  16736960 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 16736861  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  16736860 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 16736770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 16752014 - 16751824
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  16752014 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 16751915  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  16751914 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 16751824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 17523175 - 17523365
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  17523175 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 17523274  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  17523275 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 17523365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 17530040 - 17529850
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  17530040 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 17529941  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  17529940 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 17529850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 26320284 - 26320179
Alignment:
Q  94 catcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctat 193  Q
    |||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||||    
T  26320284 catcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctat 26320185  T
Q  194 taatgc 199  Q
     |||||    
T  26320184 caatgc 26320179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 3445020 - 3445127
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  3445020 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 3445119  T
Q  192 attaatgc 199  Q
    || |||||    
T  3445120 atcaatgc 3445127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 199
Target Start/End: Original strand, 11441263 - 11441393
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  11441263 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 11441362  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||| ||||| ||||| |||||    
T  11441363 aatcaatggctaccgttgctcctatcaatgc 11441393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 26486161 - 26486054
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| || ||||| ||||| |||    
T  26486161 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatagctaccgttgctcct 26486062  T
Q  192 attaatgc 199  Q
    || |||||    
T  26486061 atcaatgc 26486054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 26670363 - 26670224
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  26670363 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 26670264  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  26670263 gagccggtcaatcaatagctaccgttgctcctatcaatgc 26670224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 31564816 - 31564709
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| |||    
T  31564816 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 31564717  T
Q  192 attaatgc 199  Q
    || |||||    
T  31564716 atcaatgc 31564709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 26434900 - 26435084
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||| | ||||| || |    
T  26434900 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcaccgaagagatatg 26434999  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctat 193  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||| |||||||| |||||||| |||||    
T  26435000 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcaggagccggtcagtccatggccactgttgctcctat 26435084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 26538322 - 26538183
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  26538322 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 26538223  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  26538222 gagccggtcaatcaatagctaccgttgctcctatcaatgc 26538183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 31088775 - 31088716
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  31088775 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 31088716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 45733292 - 45733351
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  45733292 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 45733351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 168; Significance: 4e-90; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 7 - 254
Target Start/End: Original strand, 23891855 - 23892102
Alignment:
Q  7 atgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggta 106  Q
    ||||||||| || ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  23891855 atgagatggtcaccatggggactcgtctggaagaagctgtcagagaaggaattattgtattcgagaaagttgaatcctccgtgaatgcatcaaagaggta 23891954  T
Q  107 cggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccag 206  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     
T  23891955 tggtaacggacatcataagaagaaagaaacagaagtagggatggtatctgccggagccgatcaatccatggctactgttgctcctattaatgctgcccaa 23892054  T
Q  207 ttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
     |   |||||||||||| |||||||  |||| ||||||||||||||||    
T  23892055 atgcctccgtcgtacccatatgcgccgtactctcagcatcctttcttt 23892102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 25198682 - 25198928
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||| ||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25198682 tgagatggtcaccatggggactcatctggaagaagctgtcagagaaggaattattgtattcgagaaagttgaatcctccgtgaatgcatcaaagaggtac 25198781  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| |    
T  25198782 ggtaacggacatcataagaagaaggaaacagaagtagggatggtatccgccggagccggtcaatccatggctactgttgctcctattaatgcttcccaat 25198881  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |   |||||||||||| |||||||  |||| ||||||||||||||||    
T  25198882 tgcctccgtcgtacccatatgcgccgtactctcagcatcctttcttt 25198928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 24951761 - 24951955
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  24951761 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24951860  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcc 203  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  24951861 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgctgcc 24951955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 24688668 - 24688423
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  24688668 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24688569  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  24688568 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 24688469  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||| ||||||||||||    
T  24688468 gcctccgtcatacccatatgcgccgtattctcaacatcctttcttt 24688423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 30934287 - 30934483
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  30934287 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 30934386  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||| |||||||||| ||||| ||||| |||||    
T  30934387 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctaccggagccggccaatccatgactactgttgctcctatcaatgcagccca 30934483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 23752961 - 23752716
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  23752961 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 23752862  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  23752861 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 23752762  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||| ||  || | ||||||||||||||||    
T  23752761 gcctccgtcatacccatatgtgccgtattctcagcatcctttcttt 23752716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 23718500 - 23718254
Alignment:
Q  9 gagatggacatcatggggactcgtctagaag-aagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    ||||||| || |||||| |||||||| |||| ||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| ||||||||     
T  23718500 gagatggtcaccatgggaactcgtctggaaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtat 23718401  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    ||||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||      
T  23718400 ggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaa 23718301  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |   |||||| ||||| |||| ||  || | ||||||||||||||||    
T  23718300 tgcctccgtcatacccatatgtgccgtattctcagcatcctttcttt 23718254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 11549005 - 11549201
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  11549005 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 11549104  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  11549105 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 11549201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 254
Target Start/End: Complemental strand, 22999624 - 22999380
Alignment:
Q  10 agatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacgg 109  Q
    |||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| ||    
T  22999624 agatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatgg 22999525  T
Q  110 taacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtta 209  Q
    ||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |     
T  22999524 taatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaatg 22999425  T
Q  210 tttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
      |||||| ||||| |||| ||  || | ||||||||||||||||    
T  22999424 cctccgtcatacccatatgtgccgtattctcagcatcctttcttt 22999380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 33777138 - 33777328
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  33777138 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 33777237  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||    
T  33777238 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagctggtcaatccatggctactgttgctcctatcaatgc 33777328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 15659271 - 15659081
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  15659271 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 15659172  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  15659171 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 15659081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 40474051 - 40473873
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||| || ||||| ||||||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || ||||| |||||||| || || |    
T  40474051 atgggaacccgtcttgaagaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatacggtaatggacacc 40473952  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||||||||| |||||    
T  40473951 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgcccctatcaatgc 40473873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 205
Target Start/End: Original strand, 2510753 - 2510898
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | ||||||||||||||| ||||| || || || |||||||||||||| ||||| || |||||||| || |    
T  2510753 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtatcagctg 2510852  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    |||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  2510853 gagccggtcaatccatggctaccgttgctcctatcaatgcagccca 2510898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 9317153 - 9317292
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | ||||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  9317153 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9317252  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  9317253 gagccggtcaatcaatggctactgttgctcctatcaatgc 9317292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 22888287 - 22888369
Alignment:
Q  172 ccatggctactgttgcccctattaatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||| ||||||||| ||||||    
T  22888287 ccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttcttt 22888369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 6874004 - 6874143
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | ||||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  6874004 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 6874103  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  6874104 gagccggtcaatcaatgactactgttgctcctatcaatgc 6874143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 12131889 - 12131996
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  12131889 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 12131988  T
Q  192 attaatgc 199  Q
    || |||||    
T  12131989 atcaatgc 12131996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 24681171 - 24681278
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  24681171 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 24681270  T
Q  192 attaatgc 199  Q
    || |||||    
T  24681271 atcaatgc 24681278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 24723698 - 24723805
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  24723698 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 24723797  T
Q  192 attaatgc 199  Q
    || |||||    
T  24723798 atcaatgc 24723805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 37771427 - 37771320
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||    
T  37771427 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgcacct 37771328  T
Q  192 attaatgc 199  Q
    || |||||    
T  37771327 atcaatgc 37771320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 5637561 - 5637751
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| ||||| || |    
T  5637561 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 5637660  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  5637661 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 5637751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 8665902 - 8665796
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||    
T  8665902 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 8665803  T
Q  193 ttaatgc 199  Q
    | |||||    
T  8665802 tcaatgc 8665796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 199
Target Start/End: Complemental strand, 15759320 - 15759178
Alignment:
Q  57 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 156  Q
    |||||||| || ||||||| |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  15759320 attattgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcag 15759221  T
Q  157 ccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    | ||||| |||||||| |||||||||||||| ||||| |||||    
T  15759220 ctggagcaggtcaatcaatggctactgttgctcctatcaatgc 15759178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 18375923 - 18375745
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  18375923 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 18375824  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  18375823 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 18375745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 30151669 - 30151847
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  30151669 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 30151768  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  30151769 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 30151847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 37359154 - 37358976
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||| || ||||| || |||||  ||||||| || || |||||||| ||||||| |||||| ||  | | |||||| |||||||| ||||| || || |    
T  37359154 atgggaacccgtcttgaggaagcagtcagagatgggatcattgtatttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacacc 37359055  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  37359054 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 37358976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 9549003 - 9548870
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  9549003 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9548904  T
Q  160 gagccggtcaatccatggctactgttgcccctat 193  Q
    ||||||||||||||||||| |||||||| |||||    
T  9548903 gagccggtcaatccatggccactgttgctcctat 9548870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 41674420 - 41674544
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    |||||||  |||||||| |  ||||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  41674420 gagaaagccgaatcctctgtgaatgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 41674519  T
Q  169 aatccatggctactgttgcccctat 193  Q
    ||||||||||||||||||| |||||    
T  41674520 aatccatggctactgttgctcctat 41674544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 18501208 - 18501069
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  18501208 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 18501109  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  18501108 gagccggtcaatcaatggctactgttgctcctatcaatgc 18501069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 26480094 - 26480233
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  26480094 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctg 26480193  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  26480194 gagccggtcaatcaatggctactgttgctcctatcaatgc 26480233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 30168171 - 30168298
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  30168171 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 30168270  T
Q  160 gagccggtcaatccatggctactgttgc 187  Q
    ||||||||||||||||||||||| ||||    
T  30168271 gagccggtcaatccatggctactattgc 30168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 31431130 - 31431269
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  31431130 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 31431229  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||||||||||||  ||||||||||||| ||||| |||||    
T  31431230 gagccggtcaatctgtggctactgttgctcctatcaatgc 31431269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 31826847 - 31826740
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  31826847 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 31826748  T
Q  192 attaatgc 199  Q
    || |||||    
T  31826747 atcaatgc 31826740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 37671920 - 37671813
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| |||||||| ||||| |||    
T  37671920 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatctatggctaccgttgctcct 37671821  T
Q  192 attaatgc 199  Q
    || |||||    
T  37671820 atcaatgc 37671813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 37754670 - 37754809
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| |||||| || |||| ||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  37754670 attgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37754769  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  37754770 gagccggtcaatcaatggctactgttgcacctatcaatgc 37754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 3789177 - 3789367
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| ||||| || |    
T  3789177 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 3789276  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  3789277 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 3789367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 205
Target Start/End: Original strand, 34616223 - 34616368
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  34616223 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 34616322  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    ||||||||||| | |||||||||||||| ||||| ||||| |||||    
T  34616323 gagccggtcaagctatggctactgttgcacctatcaatgcagccca 34616368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 33516090 - 33516185
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  33516090 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 33516185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 43077900 - 43078090
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || ||||| || |    
T  43077900 gagatggtcaccatgggaacccgtctcgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatg 43077999  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| ||  | |||||||||||| | |||||||||||||| ||||| |||||    
T  43078000 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcaactggagccggtcaagctatggctactgttgcacctatcaatgc 43078090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 32599897 - 32599784
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||| ||||| ||||| |||||||| || || |||||||||||||| ||| |||||||||| |||    
T  32599897 tgcatcgaagaggtatggtaatggacaccacaagaagaaggaaacggaagtggggatggtgtcagctggagccggtcaatcaatgactactgttgctcct 32599798  T
Q  192 attaatgctgccca 205  Q
    || ||||| |||||    
T  32599797 atcaatgcagccca 32599784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 13325304 - 13325165
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  13325304 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 13325205  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||| |||||||| ||||| ||||| |||||    
T  13325204 gagctggtcaatcaatggctaccgttgctcctatcaatgc 13325165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 28648937 - 28649055
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  28648937 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 28649036  T
Q  169 aatccatggctactgttgc 187  Q
    || | ||||||||||||||    
T  28649037 aagctatggctactgttgc 28649055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 28960226 - 28960120
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| | |||||||||||| |||    
T  28960226 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaacggctactgttgcacct 28960127  T
Q  192 attaatg 198  Q
    || ||||    
T  28960126 atcaatg 28960120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 29967517 - 29967387
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || || ||||||||||| ||||| |||||||| || || |||||||| |    
T  29967517 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaaaaagaaagaaacggaagtggggatggtgtcagctggagccgggc 29967418  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||||||||| ||||| |||||    
T  29967417 aatcaatggctactgttgctcctatcaatgc 29967387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 199
Target Start/End: Original strand, 30029126 - 30029256
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || || ||||||||||| ||||| |||||||| || || |||||||| |    
T  30029126 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaaaaagaaagaaacggaagtggggatggtgtcagctggagccgggc 30029225  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||||||||| ||||| |||||    
T  30029226 aatcaatggctactgttgctcctatcaatgc 30029256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 11325634 - 11325693
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  11325634 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 11325693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 13184970 - 13184911
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  13184970 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 13184911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 13440816 - 13440757
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  13440816 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 13440757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 33877087 - 33877146
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  33877087 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 33877146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 7e-70; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 16283091 - 16283336
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || |||||||||||||||| ||||||||| |  ||||||||||||||||| |    
T  16283091 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtattcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 16283190  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |    
T  16283191 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaat 16283290  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||||||||| |||||||  |||| ||||||||||||||||    
T  16283291 gcctccgtcgtacccatatgcgccgtactctcagcatcctttcttt 16283336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 8 - 253
Target Start/End: Complemental strand, 22081446 - 22081201
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || || |||  ||||||||| ||||||||||||| || |||     
T  22081446 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagatggcattattgtgtttgaaaaatgtgaatcctctgcaaatgcatcaaggaagtat 22081347  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    || || |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||| || |||||||| |||     
T  22081346 ggcaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccatggctactgttgcccccatcaatgctgctcagc 22081247  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttctt 253  Q
    ||  |||| |||| | |||   |||||||| |||||||||||||||    
T  22081246 tacctccgccgtatcagtacatgcaatactctcagcatcctttctt 22081201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 16277196 - 16277441
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  16277196 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 16277295  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  16277296 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 16277395  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||||||||||||||||    
T  16277396 gcctccgtcatacccatatgcgccgtattctcagcatcctttcttt 16277441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 19687740 - 19687985
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  19687740 gagatggtcaccatgggaacccgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 19687839  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||||||||  |    
T  19687840 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagccggtcaatccatggctactgttgctcctatcaatgctgcccaaat 19687939  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || |  |||||||||||||||    
T  19687940 gcctccgtcatacccatatgcgccgtattcccagcatcctttcttt 19687985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 2137832 - 2137587
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||| | || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  2137832 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaatgaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 2137733  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  2137732 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 2137633  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||||||||||||||||    
T  2137632 gcctccgtcatacccatatgcgccgtattctcagcatcctttcttt 2137587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 14557269 - 14557465
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  14557269 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 14557368  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||||| || ||||| ||||| |||||    
T  14557369 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgtcgctcctatcaatgcagccca 14557465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 27609478 - 27609282
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| || |||||  |||| || || || ||||| ||||||||||  |||||||| |  ||||||||||||||||| |    
T  27609478 gagatggtcaccatgggaactcgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagccgaatcctctgtgaatgcatcaaagaggtatg 27609379  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  27609378 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 27609282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 18710228 - 18710418
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18710228 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18710327  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  18710328 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 18710418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 19674080 - 19674270
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || |||||||| |||||||||| |||||| || || | ||| || |||||||| |    
T  19674080 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaattattgtgttcgagaaagctgaatcttctgcgagtgcgtcgaagaggtatg 19674179  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || ||||| |||||||||||||| || || |||||||| || || |||||| |||||||||||||||| ||||| ||||| |||||    
T  19674180 gtaatggacatcacaagaagaaagaaacggacgtggggatggtgtcagctggagccagtcaatccatggctaccgttgctcctatcaatgc 19674270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 31490263 - 31490133
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  31490263 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtc 31490164  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||||||||||||||| |||||    
T  31490163 aatcaatggctactgttgcccctatcaatgc 31490133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 31354250 - 31354362
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||||| || ||||| ||||    
T  31354250 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatccatggccaccgttgctccta 31354349  T
Q  193 ttaatgctgccca 205  Q
    | ||||| |||||    
T  31354350 tcaatgcagccca 31354362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 19208850 - 19208743
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||| ||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  19208850 tgcatcgaagaagtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 19208751  T
Q  192 attaatgc 199  Q
    || |||||    
T  19208750 atcaatgc 19208743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 19286158 - 19286297
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  19286158 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 19286257  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  19286258 gagccggtcaatccatggccactgttgctcctatcaatgc 19286297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 28362477 - 28362350
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  28362477 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 28362378  T
Q  160 gagccggtcaatccatggctactgttgc 187  Q
    |||||||||||||||||||||| |||||    
T  28362377 gagccggtcaatccatggctaccgttgc 28362350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 3330080 - 3329902
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||| |||||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || |    
T  3330080 atgggaactcgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacacc 3329981  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    | |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||  ||||| ||||| |||||    
T  3329980 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctatcgttgctcctatcaatgc 3329902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 199
Target Start/End: Original strand, 29828967 - 29829145
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || |    
T  29828967 atgggaacccgtcttgaggaagccgtcagagatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacacc 29829066  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  29829067 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 29829145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 19518665 - 19518526
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  19518665 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 19518566  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  19518565 gagccggtcaatcaatgactactgttgctcctatcaatgc 19518526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 199
Target Start/End: Original strand, 33258425 - 33258555
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  33258425 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatgggcaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 33258524  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||||||||| ||||| |||||    
T  33258525 aatcaatggctactgttgctcctatcaatgc 33258555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 44562932 - 44562991
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||||||||||||||||||| ||||||||||||||||    
T  44562932 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttcttt 44562991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 12093306 - 12093116
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| ||||| || |    
T  12093306 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagagatatg 12093207  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||| ||||| ||||||||| |||| ||||| |||||    
T  12093206 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggccaatctatggctactattgctcctatcaatgc 12093116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 19659423 - 19659364
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||||||||||||||||||| ||||||||| ||||||    
T  19659423 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcccttcttt 19659364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 9354453 - 9354512
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  9354453 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 9354512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 118; Significance: 3e-60; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 29405 - 29650
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| ||||| |||| ||||||||| |  ||||||||||||||||| |    
T  29405 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatg 29504  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |    
T  29505 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaat 29604  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       ||| ||||||||||||||||  || | ||||||||||||||||    
T  29605 gcctccatcgtacccgtatgcgccgtattctcagcatcctttcttt 29650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 40683 - 40438
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  40683 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 40584  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  40583 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 40484  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||| ||||||| |||||||  || | ||||||||||||||||    
T  40483 gcctccgccgtacccatatgcgccgtattctcagcatcctttcttt 40438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 47599 - 47403
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| |||||||||| |||||||||||  ||||||||||||||||| |    
T  47599 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctccgtgaatgcatcaaagaggtatg 47500  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || |||||||||||| |||||||||||||||| | ||| ||||| |||||    
T  47499 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaacccatggctactgttgctcttatcaatgcagccca 47403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 8 - 253
Target Start/End: Original strand, 21208 - 21453
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| || |||||||| || ||||||| ||||||||| ||||||||||||| || |||     
T  21208 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagacggaattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtat 21307  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 207  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||||||||||||||| || |||||| | |||     
T  21308 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccgtggctactgttgcccccatcaatgcttctcagc 21407  T
Q  208 tatttccgtcgtacccgtatgcgcaatactgtcagcatcctttctt 253  Q
    ||  |||| |||||| |||   |||||||| |||||||||||||||    
T  21408 tacctccgccgtaccagtacatgcaatactctcagcatcctttctt 21453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 26934 - 27179
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  26934 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 27033  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  27034 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 27133  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||||||||||||||||    
T  27134 gcctccgtcatacccatatgcgccgtattctcagcatcctttcttt 27179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 6e-46; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 13299508 - 13299263
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||||||||| || |    
T  13299508 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagagatatg 13299409  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||  |    
T  13299408 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagctggtcaatccatggctactgttgctcctatcaatgcagcccaaat 13299309  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||||||||||||||||    
T  13299308 gcctccgtcatacccatatgcgccgtattctcagcatcctttcttt 13299263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 24863356 - 24863601
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||| | |||||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  24863356 gagatggtcaccatgagaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24863455  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  24863456 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 24863555  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||||||||||||||||    
T  24863556 gcctccgtcctacccatatgcgccgtattctcagcatcctttcttt 24863601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 15424874 - 15424629
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| |||||||||| |||||| || |  ||||||||||||||||| |    
T  15424874 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcttctgtgaatgcatcaaagaggtatg 15424775  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  15424774 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 15424675  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||||||  || | ||||||||||||||||    
T  15424674 gcctccgtcatacccatatgcgccgtattctcagcatcctttcttt 15424629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 22935434 - 22935238
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  22935434 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 22935335  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    ||||||| || || |||||||||||||| ||| |||||||||| || ||||| ||||||||||||||| |||||||||| ||||| ||||| |||||    
T  22935334 gtaacggacaccacaagaagaaagaaacggaaatagggatggtgtcagccggggccggtcaatccatgactactgttgctcctatcaatgcagccca 22935238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 23857879 - 23857683
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  23857879 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 23857780  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    ||||||| || || |||||||||||||| ||| |||||||||| || ||||| ||||||||||||||| |||||||||| ||||| ||||| |||||    
T  23857779 gtaacggacaccacaagaagaaagaaacggaaatagggatggtgtcagccggggccggtcaatccatgactactgttgctcctatcaatgcagccca 23857683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 20160345 - 20160534
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||||||||||||||| |||| ||||| || ||||| || || |||| |||||||||||  |  ||| |||| ||||||    
T  20160345 tgagatggtcaccatgggaacccgtctagaagaagctgtcagggaaggaatcattgtgtttgataaaggtgaatcctccgtgagcgcaccaaaaaggtac 20160444  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgct 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || |||    |||||||||||||||||||||||||||||| ||||||||    
T  20160445 ggtaacggtcatcataagaagaaggaaacagaagtagggatggaatttgc---tgccggtcaatccatggctactgttgcccctgttaatgct 20160534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 22172486 - 22172297
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||||||||||||||| |||| ||||| || ||||| || || |||| |||||||||||  |  ||| |||| ||||||    
T  22172486 tgagatggtcaccatgggaacccgtctagaagaagctgtcagggaaggaatcattgtgtttgataaaggtgaatcctccgtgagcgcaccaaaaaggtac 22172387  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgct 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || |||    |||||||||||||||||||||||||||||| ||||||||    
T  22172386 ggtaacggtcatcataagaagaaggaaacagaagtagggatggaatttgc---tgccggtcaatccatggctactgttgcccctgttaatgct 22172297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 26988640 - 26988885
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  26988640 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 26988739  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  26988740 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 26988839  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||| ||  || | ||||||||||||||||    
T  26988840 gcctccgtcatacccatatgtgccgtattctcagcatcctttcttt 26988885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 26999712 - 26999957
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  26999712 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 26999811  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||  |    
T  26999812 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaat 26999911  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
       |||||| ||||| |||| ||  || | ||||||||||||||||    
T  26999912 gcctccgtcatacccatatgtgccgtattctcagcatcctttcttt 26999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 60 - 205
Target Start/End: Complemental strand, 24305124 - 24304979
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| |||||||||| ||||||||| |  ||||||||||||||||| ||||| || || || |||||||||||||| |||||||||||||| || || |    
T  24305124 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 24305025  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||    
T  24305024 gagccggtcaatccatggctactgtcgctcctatcaatgctgccca 24304979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 26918070 - 26918209
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| |||||||||| ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| |||||||||||||| || || |    
T  26918070 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 26918169  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  26918170 gagccggtcaatccatggctactgttgctcctatcaatgc 26918209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 16749493 - 16749738
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  | |||||| |||||||| |    
T  16749493 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatgggatcattgtgttcgagaaagctgaatcctctgtgagtgcatcgaagaggtatg 16749592  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 208  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| || || || ||  |    
T  16749593 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaacgcagctcaaat 16749692  T
Q  209 atttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
     | |||||| ||||| |||| ||  || | ||||||||||||||||    
T  16749693 gtctccgtcatacccatatgtgccgtattctcagcatcctttcttt 16749738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 29549117 - 29549307
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| |||||||| |    
T  29549117 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagaggtatg 29549216  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || ||||| |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  29549217 gtaatggacatcacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 29549307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 22477673 - 22477585
Alignment:
Q  166 gtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    ||||||||||||||||||||||||| |||||||||||||| |||  || |||||||||||||||||| |||| ||||||||| ||||||    
T  22477673 gtcaatccatggctactgttgccccaattaatgctgcccaattacctctgtcgtacccgtatgcgcagtactctcagcatcccttcttt 22477585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 27044029 - 27044225
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| ||||| || |    
T  27044029 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 27044128  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  27044129 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgcagccca 27044225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 3695702 - 3695892
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| ||||| || |    
T  3695702 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatg 3695801  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  3695802 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 3695892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 17024901 - 17025097
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||||||  |||||||| |  |||||||| |||||||| |    
T  17024901 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagccgaatcctctgtgaatgcatcgaagaggtatg 17025000  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || |||||||||||| | |||||||||||||| ||||| ||||| |||||    
T  17025001 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctggagccggtcaagctatggctactgttgctcctatcaatgcagccca 17025097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 4525011 - 4525118
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  4525011 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctactgttgcacct 4525110  T
Q  192 attaatgc 199  Q
    || |||||    
T  4525111 atcaatgc 4525118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 4757483 - 4757590
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| ||||||||||| || |||    
T  4757483 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatcaatggctactgtcgctcct 4757582  T
Q  192 attaatgc 199  Q
    || |||||    
T  4757583 atcaatgc 4757590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 4772687 - 4772826
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || ||||    
T  4772687 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 4772786  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  4772787 gagccggtcaatctatggctaccgttgctcctatcaatgc 4772826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 27007402 - 27007541
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27007402 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27007501  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  27007502 gagccggtcaatcaatggctactgttgctcctatcaatgc 27007541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 27484807 - 27484946
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| |||||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27484807 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27484906  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  27484907 gagccggtcaatcaatggctaccgttgctcctatcaatgc 27484946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 29572735 - 29572842
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  29572735 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 29572834  T
Q  192 attaatgc 199  Q
    || |||||    
T  29572835 atcaatgc 29572842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 29501096 - 29501235
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||  |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  29501096 attgtgtttgagaaagctgaatcctttgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 29501195  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||||||||||||||||||||| ||||| ||||| |||||    
T  29501196 gagccggtcaatccatggctaccgttgctcctatcaatgc 29501235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 30558490 - 30558395
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  30558490 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 30558395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 34463867 - 34463728
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  34463867 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 34463768  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  34463767 gagccggtcaatcaatgactactgttgctcctatcaatgc 34463728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 4546341 - 4546151
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  4546341 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 4546242  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  4546241 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 4546151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 16944524 - 16944394
Alignment:
Q  69 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  16944524 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 16944425  T
Q  169 aatccatggctactgttgcccctattaatgc 199  Q
    |||| |||||||||||||| ||||| |||||    
T  16944424 aatcaatggctactgttgctcctatcaatgc 16944394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 28207081 - 28207271
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  28207081 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 28207180  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  28207181 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 28207271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 26778100 - 26778000
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| ||||    
T  26778100 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaatggctactgttgcaccta 26778001  T
Q  193 t 193  Q
    |    
T  26778000 t 26778000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 27360484 - 27360377
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| |||    
T  27360484 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 27360385  T
Q  192 attaatgc 199  Q
    || |||||    
T  27360384 atcaatgc 27360377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 27450827 - 27450720
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| |||    
T  27450827 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 27450728  T
Q  192 attaatgc 199  Q
    || |||||    
T  27450727 atcaatgc 27450720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 16673817 - 16673956
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  16673817 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 16673916  T
Q  160 gagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  16673917 gagccggtcaatcaatagctaccgttgctcctatcaatgc 16673956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 4724688 - 4724510
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| || ||||| ||||| || || |    
T  4724688 atgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtatggtaatggacacc 4724589  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    | |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  4724588 acaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 4724510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 26116893 - 26116792
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| || ||||| ||||| |||    
T  26116893 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatagctaccgttgctcct 26116794  T
Q  192 at 193  Q
    ||    
T  26116793 at 26116792  T

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Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 28162485 - 28162544
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  ||| |||||||||||||||||||||| ||||||||||||||||    
T  28162485 aatgctgctcagctacctccatcgtacccgtatgcgcaatactctcagcatcctttcttt 28162544  T

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Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 8892678 - 8892619
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  8892678 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 8892619  T

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Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 13522441 - 13522382
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  13522441 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 13522382  T

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Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 33374624 - 33374565
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||    
T  33374624 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttcttt 33374565  T

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Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 202
Target Start/End: Complemental strand, 27273128 - 27272947
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||||||||||||||| |||||  |||| ||||| || |||||||| ||||| | ||| || ||  ||||||  |  |||||||| || || || || |    
T  27273128 atggggactcgtctagaggaagccgtcagggaaggtatcattgtatttgagaagggtgagtcttctacaaatgggttgaagaggtatggcaatggccacc 27273029  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgc 202  Q
    | |||||||| |||||||| || || ||||||||  | ||||| |||||  | |  |||||||| |||||| ||||||||||    
T  27273028 acaagaagaaggaaacagaggttggaatggtatcctctggagcaggtcagactacagctactgtcgcccctgttaatgctgc 27272947  T

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Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 27630254 - 27630077
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||||||||||||||| || ||  ||||||| || || |||||||| ||||| | ||| || ||  ||| ||  || |||||||| || || || || |    
T  27630254 atggggactcgtctagaggaggccgtcagagagggtatcattgtatttgagaagggtgagtcttctacaagtgggtcgaagaggtatggcaatggccacc 27630155  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatg 198  Q
    | |||||||| |||||||| || || ||||||||  | ||||| ||||| || | ||||||||| |||||| ||||||    
T  27630154 acaagaagaaggaaacagaggttggaatggtatcctcgggagcaggtcagtctacggctactgtcgcccctgttaatg 27630077  T

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Target: scaffold0029 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 744 - 554
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  744 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 645  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| ||  | ||||||||||||||||||||||||||||| ||||| |||||    
T  644 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaactggagccggtcaatccatggctactgttgctcctatcaatgc 554  T

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Target: scaffold0336 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 7874 - 8064
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| |||||||| |    
T  7874 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 7973  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||  ||||||||||||| ||||| |||||    
T  7974 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatctgtggctactgttgctcctatcaatgc 8064  T

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Target: scaffold0099 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 48769 - 48568
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatc-aaagaggtac 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| |||||||||| ||||||||| |  |||||||| |||||||||     
T  48769 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaaagaggtat 48670  T
Q  108 ggtaac-ggtcatcataagaagaaagaaacagaagta-gggatggtatc-tgccggagccgg--tcaatccatggcta-ctgttgcccctattaatgctg 201  Q
    |||||| || || || |||||||||||||| |||||| |||||||| || ||||||||||||   ||||||||||||| ||||||| ||||| |||||||    
T  48669 ggtaacgggacaccacaagaagaaagaaacggaagtaggggatggtgtcttgccggagccgggtccaatccatggctacctgttgctcctatcaatgctg 48570  T
Q  202 cc 203  Q
    ||    
T  48569 cc 48568  T

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Target: scaffold0144 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 26816 - 26626
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| | |||||| || ||||| || |    
T  26816 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 26717  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  26716 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 26626  T

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Target: scaffold0350 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 7770 - 7663
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 191  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  7770 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 7671  T
Q  192 attaatgc 199  Q
    || |||||    
T  7670 atcaatgc 7663  T

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Target: scaffold0237 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 15544 - 15366
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  15544 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 15445  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 187  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  15444 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 15366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 7579 - 7769
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  7579 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 7678  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  7679 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 7769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 9593 - 9490
Alignment:
Q  96 tcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctatta 195  Q
    |||||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||| |    
T  9593 tcaaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctcctatca 9494  T
Q  196 atgc 199  Q
    ||||    
T  9493 atgc 9490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 5682 - 5821
Alignment:
Q  60 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  5682 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagt-gggatggtgtcagctg 5780  T
Q  160 gagccggtcaatc-catggctactgttgcccctattaatgc 199  Q
    |||||||||||||  |||||||||||||| ||||| |||||    
T  5781 gagccggtcaatcaaatggctactgttgctcctatcaatgc 5821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 3083 - 3024
Alignment:
Q  195 aatgctgcccagttatttccgtcgtacccgtatgcgcaatactgtcagcatcctttcttt 254  Q
    |||||||| ||| ||  ||||||||||||||| |||||||||| ||||||||| ||||||    
T  3083 aatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttcttt 3024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 197 - 157
Alignment:
Q  159 ggagccggtcaatccatggctactgttgcccctattaatgc 199  Q
    |||||||||||||| |||||||||||||| ||||| |||||    
T  197 ggagccggtcaatcaatggctactgttgcacctatcaatgc 157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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