View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9690_low_29 (Length: 240)
Name: NF9690_low_29
Description: NF9690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9690_low_29 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0373 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 145; Significance: 2e-76; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 15 - 227
Target Start/End: Original strand, 5148232 - 5148444
Alignment:
| Q |
15 |
tttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttcca |
114 |
Q |
| |
|
|||||||| | ||| || |||||||||||| ||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||| ||||| |||| |
|
|
| T |
5148232 |
tttggtgattcctcgcgtatgatttctcttgccatgtctcgcaacaaatcatgcattccaagccgattcatatcatcaacagtcacaaggcttcgctcca |
5148331 |
T |
|
| Q |
115 |
caaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaag |
214 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
5148332 |
gtaggacatttattccaatttctgcataaagttcacagccatttaatatatgtatgacatcatttcggtccatcccaataaagaaacaagctatgtcaag |
5148431 |
T |
|
| Q |
215 |
gaatatttctttc |
227 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5148432 |
gaatatttctttc |
5148444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 5691393 - 5691598
Alignment:
| Q |
24 |
ttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacat |
123 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
5691393 |
ttctcacgaacgatttctcttcccatatctcgcaacaaatcatgcattctaagcctgttcctatcatcaacagtcacaaggcttcgctccacaaggacat |
5691492 |
T |
|
| Q |
124 |
ttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttc |
223 |
Q |
| |
|
||||||||||| | |||||||| ||||| |||| ||||||||||| |||||||||||| ||||| ||||||||||||||||| | ||||||||||||||| |
|
|
| T |
5691493 |
ttattccaattcctgcataaagatcacaaccatctaatatatgtacaacatcatttcgaaccatcccaataaagaaacaagccacgtcaaggaatatttc |
5691592 |
T |
|
| Q |
224 |
tttctc |
229 |
Q |
| |
|
|||||| |
|
|
| T |
5691593 |
tttctc |
5691598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 5349104 - 5348890
Alignment:
| Q |
17 |
tggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcat--gcattccaagtctgttcctatcatcaacagtcacaagacttcgttcca |
114 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||| || | |
|
|
| T |
5349104 |
tggtgatttcccacgaatgatttctcttcccatatctcgcaacaaatcatatgcattccaagtttgttcttatcatcaacagtgacaagacttcgatcaa |
5349005 |
T |
|
| Q |
115 |
caaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaag |
214 |
Q |
| |
|
||| || | ||||||||||||| ||| |||||||||| |||||||||||| || |||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
5349004 |
caaagatacttattccaatttcagcaaaaagttcacatccatttaatataagtgtaacatcatttcggtccatcccaataaagaaacaagctatgtcaag |
5348905 |
T |
|
| Q |
215 |
gaatatttctttctc |
229 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
5348904 |
gaatatttctttctc |
5348890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 5094773 - 5094556
Alignment:
| Q |
12 |
tcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgtt |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| || | |
|
|
| T |
5094773 |
tcctctggtgatttctcacgaatgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttcttatcatcaacagttacaagactacgct |
5094674 |
T |
|
| Q |
112 |
ccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtc |
211 |
Q |
| |
|
| ||||||| | ||||||||||||| ||| ||||| |||| |||||||||||| || |||| ||||||||| |||| ||||||||||||||||||| || |
|
|
| T |
5094673 |
caacaaggatacttattccaatttcagcaaaaagtccacatccatttaatataagtgtaacgtcatttcggtccatcccaataaagaaacaagctacatc |
5094574 |
T |
|
| Q |
212 |
aaggaatatttctttctc |
229 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
5094573 |
aaggaatatttctttctc |
5094556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 5424480 - 5424268
Alignment:
| Q |
17 |
tggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccaca |
116 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| |||||||| || || ||| |
|
|
| T |
5424480 |
tggtgatttcccacgaatgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttattatcatcaacagtgacaagactccgctcaaca |
5424381 |
T |
|
| Q |
117 |
aggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaagga |
216 |
Q |
| |
|
|||| | ||||||||||||| ||| ||||| |||| |||||||||||| || |||||||||||| | |||| |||||||||||||||||||||||||||| |
|
|
| T |
5424380 |
aggatacttattccaatttcagcaaaaagtccacatccatttaatataagtgtaacatcatttctgtccattccaataaagaaacaagctatgtcaagga |
5424281 |
T |
|
| Q |
217 |
atatttctttctc |
229 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5424280 |
atatttctttctc |
5424268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 229
Target Start/End: Complemental strand, 5395772 - 5395558
Alignment:
| Q |
15 |
tttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttcca |
114 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||| ||||| ||||| || | |
|
|
| T |
5395772 |
tttggtgacttctcacgaacgatttctcttcccatatctcttagcaaatcatgcattgcaagtctgttcctatcatcaacagttacaaggcttcgctcaa |
5395673 |
T |
|
| Q |
115 |
caaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaag |
214 |
Q |
| |
|
|||||||| ||| ||||||||| ||| ||||||| | |||||||||||||||||||||||||| | | |||| |||||||| ||||||||||||||||| |
|
|
| T |
5395672 |
caaggacacttactccaatttctgcaaaaagttcgctaccatttaatatatgtataacatcattcctgtccatcccaataaaaaaacaagctatgtcaag |
5395573 |
T |
|
| Q |
215 |
gaatatttctttctc |
229 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
5395572 |
gaatatttctttctc |
5395558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 5369187 - 5368975
Alignment:
| Q |
17 |
tggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccaca |
116 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| || ||| |
|
|
| T |
5369187 |
tggtgatttcccacgaatgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttcttatcatcaacagtgacaagacttcgctcaaca |
5369088 |
T |
|
| Q |
117 |
aggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaagga |
216 |
Q |
| |
|
|||| | ||||||||||||| ||| ||||| |||| |||| ||||||| || |||||||||||||| || | ||||||||||||||||||| ||||||| |
|
|
| T |
5369087 |
aggatacttattccaatttcagcaaaaagtccacatccatctaatataagtgtaacatcatttcggtccttcccaataaagaaacaagctacatcaagga |
5368988 |
T |
|
| Q |
217 |
atatttctttctc |
229 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5368987 |
atatttctttctc |
5368975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 5104142 - 5104359
Alignment:
| Q |
12 |
tcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgtt |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||| | |
|
|
| T |
5104142 |
tcctctggtgatttctcacgaatgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttcttatcatcaacagttataagacttcgct |
5104241 |
T |
|
| Q |
112 |
ccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtc |
211 |
Q |
| |
|
| ||||||| | ||||||||||||| ||| ||||| |||| |||| ||||||| || |||| ||||||||| |||| ||||||||||||||||||| || |
|
|
| T |
5104242 |
caacaaggatacttattccaatttctgcaaaaagtccacatccatctaatataagtgtaacgtcatttcggtccatcccaataaagaaacaagctacatc |
5104341 |
T |
|
| Q |
212 |
aaggaatatttctttctc |
229 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
5104342 |
gaggaatatttctttctc |
5104359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 5158771 - 5158988
Alignment:
| Q |
12 |
tcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgtt |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||| |||||||| || | |
|
|
| T |
5158771 |
tcctctggtgatttctcacgaatgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttcttaccatcaacagtaacaagactacgct |
5158870 |
T |
|
| Q |
112 |
ccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtc |
211 |
Q |
| |
|
| ||||||| ||||||||||||| || |||||||||| |||||||||||| || |||| ||||||||| |||| || |||||||||||||||| || |
|
|
| T |
5158871 |
caacaaggatgcttattccaatttcaccaaaaagttcacatccatttaatataagtgtaacgtcatttcggtccatccctataaagaaacaagctacatc |
5158970 |
T |
|
| Q |
212 |
aaggaatatttctttctc |
229 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
5158971 |
aaggaatatttctttctc |
5158988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 5068349 - 5068561
Alignment:
| Q |
17 |
tggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccaca |
116 |
Q |
| |
|
|||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| | | ||||||| | || |||||||| || ||| |
|
|
| T |
5068349 |
tggtgatttcccacgaacgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttctttttatcaacaataaccagacttcgctcaaca |
5068448 |
T |
|
| Q |
117 |
aggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaagga |
216 |
Q |
| |
|
|||| | ||||||||||||| ||| ||||| | || |||||||||||| || |||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
5068449 |
aggatacttattccaatttcagcaaaaagtccgcatccatttaatataagtgtaacatcatttcggtccatcccaataaagaaacaagctatgtcaagga |
5068548 |
T |
|
| Q |
217 |
atatttctttctc |
229 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5068549 |
atatttctttctc |
5068561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 5342437 - 5342209
Alignment:
| Q |
1 |
gctccccaggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcac |
100 |
Q |
| |
|
|||||||| | ||||||||||| |||||||||| ||||||||||||||| ||||||| |||||| |||||||||||| ||||| | |||||| | || |
|
|
| T |
5342437 |
gctccccaagctcctttggtgatttctcacgaacgatttctcttcccatatctcgcagcaaatcgtgcattccaagtttgttcttgctgtcaacaattac |
5342338 |
T |
|
| Q |
101 |
aagacttcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaa |
200 |
Q |
| |
|
||| ||||| || ||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| |||||||||||| |||| |||||||||||| |
|
|
| T |
5342337 |
aaggcttcgctcaacaagaacacttattccaatttctgcaaaaagtccacagccatttaatatttgtatgacatcatttcggtccatcccaataaagaaa |
5342238 |
T |
|
| Q |
201 |
caagctatgtcaaggaatatttctttctc |
229 |
Q |
| |
|
|||||||||||||| |||||||||||||| |
|
|
| T |
5342237 |
caagctatgtcaagaaatatttctttctc |
5342209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 5183211 - 5183439
Alignment:
| Q |
1 |
gctccccaggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcac |
100 |
Q |
| |
|
||||| |||| || ||||||||||||||||||| ||||||||||||||| |||| | ||||||||||||| ||| ||||||||||||||||||| || |
|
|
| T |
5183211 |
gctcctcaggctcttttggtgacttctcacgaacgatttctcttcccatatctcttagcaaatcatgcatttgcagtttgttcctatcatcaacagttac |
5183310 |
T |
|
| Q |
101 |
aagacttcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaa |
200 |
Q |
| |
|
||| |||| || ||||||||| ||| ||||||||| ||| ||| ||| | |||||||||||||||||||||||||| | | |||| |||||||||||| |
|
|
| T |
5183311 |
aaggcttctctcaacaaggacacttactccaatttctgcaaaaaattcgctaccatttaatatatgtataacatcattcctgtccatcccaataaagaaa |
5183410 |
T |
|
| Q |
201 |
caagctatgtcaaggaatatttctttctc |
229 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
5183411 |
caagctatgtcaaggaatatttctttctc |
5183439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 27 - 222
Target Start/End: Original strand, 5075016 - 5075211
Alignment:
| Q |
27 |
tcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacattta |
126 |
Q |
| |
|
||||||||||||||||||||||| || |||| |||||||||||||||||| ||||||||||||| ||||| ||||| ||||| || ||||| ||| ||| |
|
|
| T |
5075016 |
tcacgaatgatttctcttcccatatcacgcagcaaatcatgcattccaagcttgttcctatcatcgacagttacaaggcttcgctcaacaagtacactta |
5075115 |
T |
|
| Q |
127 |
ttccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatattt |
222 |
Q |
| |
|
||||||||| ||| |||||||||| |||||||||||| || ||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
5075116 |
ctccaatttcagcaaaaagttcacatccatttaatataagtgtaacatcatttcgatccatcccaataaagaaacaagctatgtcgaggaatattt |
5075211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 5382391 - 5382167
Alignment:
| Q |
1 |
gctccccaggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcac |
100 |
Q |
| |
|
||||| |||||||||||||||| || ||||||||||||||||||||||| || | ||||||||||||||||||||| | ||| ||||||| ||||| || |
|
|
| T |
5382391 |
gctcctcaggatcctttggtgatttttcacgaatgatttctcttcccatatcccttaacaaatcatgcattccaagtgtattcttatcatcgacagttac |
5382292 |
T |
|
| Q |
101 |
aagacttcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaa |
200 |
Q |
| |
|
||| |||| || ||||||||| ||||||| || || ||| |||| |||| ||||||||||| ||| ||||||| |||||| |||| |||||||||||| |
|
|
| T |
5382291 |
aaggcttctctcaacaaggacacttattccgatatcagcaaaaagcccacacccatttaatatttgtgtaacatcgtttcggtccat-ccaataaagaaa |
5382193 |
T |
|
| Q |
201 |
caagctatgtcaaggaatatttcttt |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
5382192 |
caagctatgtcaaggaatatttcttt |
5382167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 5261420 - 5261629
Alignment:
| Q |
16 |
ttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccac |
115 |
Q |
| |
|
||||||| | |||||||| |||||||||||||| |||||||||||| ||||||||||||| ||||| ||||||||||| ||||||| |||| || || |
|
|
| T |
5261420 |
ttggtgattcctcacgaacaatttctcttcccatatctcgcaacaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaac |
5261519 |
T |
|
| Q |
116 |
aaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaagg |
215 |
Q |
| |
|
|||||| ||||||||||||| |||| |||| ||||| ||||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||| |
|
|
| T |
5261520 |
aaggacgcttattccaatttctgcatgaagtccacagtcatttaatacgagtataacatcatttcggtccattccaattaagaaacaagctatgtcaaga |
5261619 |
T |
|
| Q |
216 |
aatatttctt |
225 |
Q |
| |
|
|||||||||| |
|
|
| T |
5261620 |
aatatttctt |
5261629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 5355892 - 5356103
Alignment:
| Q |
18 |
ggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaa |
117 |
Q |
| |
|
||||| |||||||||| || |||||||||||| ||||| | |||||||||||||| ||| || ||| ||||||||||||| ||||| ||||| || |||| |
|
|
| T |
5355892 |
ggtgatttctcacgaacgacttctcttcccatatctcgtagcaaatcatgcattctaagcctattcttatcatcaacagttacaaggcttcgctcaacaa |
5355991 |
T |
|
| Q |
118 |
ggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaa |
217 |
Q |
| |
|
| | | ||||||||||||| ||||||||| |||| ||||||||||| || || ||||||||||| | || |||||||||||||||||||||||||| || |
|
|
| T |
5355992 |
gaatacttattccaatttcagcataaagtccacatccatttaatattagtgtagcatcatttcggtcgatcccaataaagaaacaagctatgtcaagaaa |
5356091 |
T |
|
| Q |
218 |
tatttctttctc |
229 |
Q |
| |
|
|||||||||||| |
|
|
| T |
5356092 |
tatttctttctc |
5356103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 229
Target Start/End: Original strand, 5133190 - 5133392
Alignment:
| Q |
27 |
tcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacattta |
126 |
Q |
| |
|
|||||||| |||||||||||||| |||| ||||||||||||||||||||| |||| | || |||||||||| ||||| |||| || | ||| | | ||| |
|
|
| T |
5133190 |
tcacgaataatttctcttcccatatctctcaacaaatcatgcattccaagcctgtccttagcatcaacagttacaaggcttctctcaataagaatactta |
5133289 |
T |
|
| Q |
127 |
ttccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttcttt |
226 |
Q |
| |
|
|||||||||||||| ||||| |||| ||||||||||||||| ||||||||||| | |||| ||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
5133290 |
ttccaatttcggcaaaaagtccacaaccatttaatatatgtgtaacatcatttgtgtccatatcaataaaaaaacaagctatgttaaggaatatttcttt |
5133389 |
T |
|
| Q |
227 |
ctc |
229 |
Q |
| |
|
||| |
|
|
| T |
5133390 |
ctc |
5133392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 5285419 - 5285626
Alignment:
| Q |
16 |
ttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccac |
115 |
Q |
| |
|
||||||| | |||||||| ||| |||||||||| ||||||| |||| ||||||||||||| ||||| ||||||||||| ||||||| |||| || || |
|
|
| T |
5285419 |
ttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaac |
5285518 |
T |
|
| Q |
116 |
aaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaagg |
215 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||| | |||| ||||| ||||||||||| |||||||| |
|
|
| T |
5285519 |
aaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagtataacatcatttctgtccattccaattaagaaacaagc--tgtcaagg |
5285616 |
T |
|
| Q |
216 |
aatatttctt |
225 |
Q |
| |
|
|||||||||| |
|
|
| T |
5285617 |
aatatttctt |
5285626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 32 - 221
Target Start/End: Complemental strand, 5277405 - 5277216
Alignment:
| Q |
32 |
aatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattcca |
131 |
Q |
| |
|
|||||||||||||||||| || |||||||||| |||||||||||| |||| ||| |||||| || || | ||||| || ||||||||| |||||||| |
|
|
| T |
5277405 |
aatgatttctcttcccatatcccgcaacaaattatgcattccaagcttgtttttattatcaaccgttactaagcttcgctcaacaaggacacttattcca |
5277306 |
T |
|
| Q |
132 |
atttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatt |
221 |
Q |
| |
|
||| ||| ||| | ||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||| ||| ||||||||| |
|
|
| T |
5277305 |
tcttctgcaaaaaatccacagccatttaatatatgtataacatcatttctgtccatcccaataaagaaacaagctacgtcgaggaatatt |
5277216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 5445805 - 5445592
Alignment:
| Q |
16 |
ttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccac |
115 |
Q |
| |
|
||||||| | ||||| || |||| |||||||||| ||||||| | | ||||||||||||| ||||| ||||||||||||||||||| ||||| | || |
|
|
| T |
5445805 |
ttggtgattcctcacaaacgattcctcttcccatatctcgcagctgaccatgcattccaagcatgttcttatcatcaacagtcacaaggcttcgagcaac |
5445706 |
T |
|
| Q |
116 |
aaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaagg |
215 |
Q |
| |
|
||||||| ||||||||||||| ||| ||||| | || ||||||||| | |||||||||||||| || |||| || | |||||||||||| |||| |||| |
|
|
| T |
5445705 |
aaggacacttattccaatttctgcagaaagtccgcaatcatttaataaaagtataacatcattttggtccatcccgacaaagaaacaagcaatgtgaagg |
5445606 |
T |
|
| Q |
216 |
aatatttctttctc |
229 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5445605 |
aatatttctttctc |
5445592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 221
Target Start/End: Complemental strand, 5175578 - 5175389
Alignment:
| Q |
32 |
aatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattcca |
131 |
Q |
| |
|
|||||||||||||||||| || |||||||||| |||||||||||| |||| ||| |||||| || || | ||||| || || |||||| |||||||| |
|
|
| T |
5175578 |
aatgatttctcttcccatatcccgcaacaaattatgcattccaagcttgtttttattatcaaccgttactaagcttcgctcaaccaggacacttattcca |
5175479 |
T |
|
| Q |
132 |
atttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatt |
221 |
Q |
| |
|
||| ||| ||| | ||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||| ||| ||||||||| |
|
|
| T |
5175478 |
tcttctgcaaaaaatccacagccatttaatatatgtataacatcatttctgtccatcccaataaagaaacaagctacgtcgaggaatatt |
5175389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 5432150 - 5431923
Alignment:
| Q |
1 |
gctccccaggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcac |
100 |
Q |
| |
|
||||| ||||||||||||||| || | || |||||||||||||||||| || ||||||||||||||||||||||| |||| |||||||| | || |
|
|
| T |
5432150 |
gctcctcaggatcctttggtggattattacaaatgatttctcttcccatatcccgcaacaaatcatgcattccaagcttgttatcatcatcaatatatac |
5432051 |
T |
|
| Q |
101 |
aagacttcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaa |
200 |
Q |
| |
|
| || || || |||||||| |||||||| ||| ||| | | | ||||||||||| ||||||||||||||||||||| || | |||||||||||| |
|
|
| T |
5432050 |
taagctacgctcaacaaggactcttattccatcttcagcaaacaatcgacagccatttagtatatgtataacatcatttcgctccttaccaataaagaaa |
5431951 |
T |
|
| Q |
201 |
caagctatgtcaaggaatatttctttct |
228 |
Q |
| |
|
||||||||||||||||||||| |||||| |
|
|
| T |
5431950 |
caagctatgtcaaggaatattgctttct |
5431923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 36215162 - 36215379
Alignment:
| Q |
12 |
tcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgtt |
111 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||| | |
|
|
| T |
36215162 |
tcctttggtgatttctcacgaatgatctctcttcccatatctcgcagcaaatcatgcattccaagcctgttcctatcatcaacagttacaaggcttcgct |
36215261 |
T |
|
| Q |
112 |
ccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtc |
211 |
Q |
| |
|
| ||||| ||| ||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||| |
|
|
| T |
36215262 |
ctacaagaacacttactccaatttctgcaaaaagttcacttccatttaatatatgtataacatcatttctgtccatcccaataaagaaacaagctatgtc |
36215361 |
T |
|
| Q |
212 |
aaggaatatttctttctc |
229 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
36215362 |
aaggaatatttctttctc |
36215379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 8876546 - 8876318
Alignment:
| Q |
1 |
gctccccaggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcac |
100 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||| ||||| | || || |
|
|
| T |
8876546 |
gctcctcaggatcctttggtgatttctcacgaatgatttctcttcccatatctgtcaacaaatcatgcattccaagcatattcctttcatccatggttac |
8876447 |
T |
|
| Q |
101 |
aagacttcgttccacaaggacatttattccaatttcggcataaagttcacagccattt--aatatatgtataacatcatttcggaccatgccaataaaga |
198 |
Q |
| |
|
||| |||||||| ||||| ||| ||||||||||||| | |||||||||||| |||||| |||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
8876446 |
aaggcttcgttcaacaagaacacttattccaatttcaggataaagttcacacccatttaaaatatatgtataacatcatttcggtccatcccaataaaga |
8876347 |
T |
|
| Q |
199 |
aacaagctatgtcaaggaatatttctttc |
227 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
8876346 |
aacaagctatgtcaaggaatatttctttc |
8876318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 119; Significance: 6e-61; HSPs: 23)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 4125705 - 4125919
Alignment:
| Q |
7 |
caggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagact |
106 |
Q |
| |
|
|||| ||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||| |||||||||| || ||||| || |
|
|
| T |
4125705 |
caggctccattggtgatttctcacgaatgatttctcttcccatatctcgcagcaaatcatgcatgccaagcttgttcttatcatcaactgttacaaggct |
4125804 |
T |
|
| Q |
107 |
tcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagct |
206 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| || ||||| ||||||||||||| ||| | ||||||||||||||| |||| ||||| |||||||||||| |
|
|
| T |
4125805 |
tcgttcaacaaggacacttattccaatttcagcgaaaagtccacagccatttaaaataagaataacatcatttcggtccatcccaattaagaaacaagct |
4125904 |
T |
|
| Q |
207 |
atgtcaaggaatatt |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
4125905 |
atgtcaaggaatatt |
4125919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 4334289 - 4334075
Alignment:
| Q |
7 |
caggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagact |
106 |
Q |
| |
|
|||| ||| ||||||| |||||||||||||||||||||||||| ||||| | |||||||||||| ||||| ||||| || |||| || || ||||| || |
|
|
| T |
4334289 |
caggctccattggtgatttctcacgaatgatttctcttcccatatctcgaagcaaatcatgcatgccaagcttgttcttaccatcgaccgttacaaggct |
4334190 |
T |
|
| Q |
107 |
tcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagct |
206 |
Q |
| |
|
||| || ||||||||| ||||||||||||| || ||||| |||||||||||||||| || ||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
4334189 |
tcgctcaacaaggacacttattccaatttcagcgaaaagtccacagccatttaatatttgaataacatcatttcggtccatcccaataaagaaacaagct |
4334090 |
T |
|
| Q |
207 |
atgtcaaggaatatt |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
4334089 |
atgtcaaggaatatt |
4334075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 7 - 228
Target Start/End: Complemental strand, 4359147 - 4358926
Alignment:
| Q |
7 |
caggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagact |
106 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||||| ||||| | |||||||||||| ||||| ||||| |||||||||| || ||||| || |
|
|
| T |
4359147 |
caggctcctttggtgatttctcacgaatgatttctcttcccatatctcggagcaaatcatgcatgccaagcttgttcttatcatcaaccgttacaaggct |
4359048 |
T |
|
| Q |
107 |
tcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagct |
206 |
Q |
| |
|
|| || ||||||||| ||||||||||| | ||| ||| | ||||||||| ||||||| | ||||||||||| ||| |||| |||||||||||||||| | |
|
|
| T |
4359047 |
tctctcaacaaggacacttattccaattcctgcaaaaaatccacagccatctaatatacgaataacatcattccggtccattccaataaagaaacaagat |
4358948 |
T |
|
| Q |
207 |
atgtcaaggaatatttctttct |
228 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
4358947 |
atgtcaaggaatatttctttct |
4358926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 51 - 225
Target Start/End: Complemental strand, 25568688 - 25568513
Alignment:
| Q |
51 |
tctcgcaacaaatcatgcattccaagtctgttcctat-catcaacagtcacaagacttcgttccacaaggacatttattccaatttcggcataaagttca |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||| ||||||||| ||||| || |||||||| |||||||||||||| |||||||||||| |
|
|
| T |
25568688 |
tctcgcaacaaatcatgcattccaagtctgttccaattcatcaatagtcacaaggcttcgctcaacaaggacgtttattccaatttctgcataaagttca |
25568589 |
T |
|
| Q |
150 |
cagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctt |
225 |
Q |
| |
|
|| ||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||||| |||| |
|
|
| T |
25568588 |
caaccattcaatatatgtattacattatttcggaccaacccaataaagaaacaagctatgttgaggaatatatctt |
25568513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 4322367 - 4322591
Alignment:
| Q |
7 |
caggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagact |
106 |
Q |
| |
|
|||| ||| ||||||| ||||||||||||||||| |||||||| ||||||| |||||||||||| ||||| ||||| |||||||||| || ||||| || |
|
|
| T |
4322367 |
caggctccattggtgatttctcacgaatgatttcccttcccatatctcgcagcaaatcatgcatgccaagcttgttcttatcatcaaccgttacaaggct |
4322466 |
T |
|
| Q |
107 |
tcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagct |
206 |
Q |
| |
|
|| || ||||||||| ||||||||||||| || ||| | || | |||||||||||||| || ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
4322467 |
tctctcaacaaggacacttattccaatttctgcgaaaaatccagaaccatttaatatatgaatgacatcatttcgatccatcccaataaagaaacaagca |
4322566 |
T |
|
| Q |
207 |
atgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
||||||||||||||| |||||||| |
|
|
| T |
4322567 |
atgtcaaggaatattgatttctctg |
4322591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 228
Target Start/End: Complemental strand, 4343678 - 4343457
Alignment:
| Q |
7 |
caggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagact |
106 |
Q |
| |
|
|||| |||||||| || |||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||| |||||||||| | ||||| || |
|
|
| T |
4343678 |
caggctcctttggcgatttctcacgaatgatttctcttcccatatctcgcagcaaatcatgcatgccaagcttgttcttatcatcaaccattacaaggct |
4343579 |
T |
|
| Q |
107 |
tcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagct |
206 |
Q |
| |
|
|| || ||||||||| |||| || ||||| || ||| | |||||||||||| |||| | |||||||||||||| |||| |||||||||||||||| | |
|
|
| T |
4343578 |
tctctcaacaaggacacttatgccgatttctgcgaaaaatccacagccatttagtatacgaataacatcatttcgatccatcccaataaagaaacaagat |
4343479 |
T |
|
| Q |
207 |
atgtcaaggaatatttctttct |
228 |
Q |
| |
|
||||| |||||||||||||||| |
|
|
| T |
4343478 |
atgtcgaggaatatttctttct |
4343457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 4135054 - 4135269
Alignment:
| Q |
14 |
ctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttcc |
113 |
Q |
| |
|
||||||||| |||| || ||||| ||||||||||| ||||| | |||||||||||||||||| |||| ||||||||| ||| ||||| ||||| || |
|
|
| T |
4135054 |
ctttggtgatttctgtcggatgatctctcttcccatatctcgtagcaaatcatgcattccaagcttgtttttatcatcaatagttacaaggcttcgctca |
4135153 |
T |
|
| Q |
114 |
acaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaa |
213 |
Q |
| |
|
||||||||| ||||||| ||||| ||| |||| |||| ||||||||||||| |||||||| |||||| |||| |||||||||||| |||| ||||||| |
|
|
| T |
4135154 |
acaaggacacttattccgatttcagcaaaaagaccacaaccatttaatatatccataacatcgtttcggtccatcccaataaagaaaaaagcaatgtcaa |
4135253 |
T |
|
| Q |
214 |
ggaatatttctttctc |
229 |
Q |
| |
|
||||||| ||| |||| |
|
|
| T |
4135254 |
ggaatatatctctctc |
4135269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 4351966 - 4351752
Alignment:
| Q |
7 |
caggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagact |
106 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| ||||| |||| |||||||||| | ||||| || |
|
|
| T |
4351966 |
caggctcctttggtgatttctcacgaatgatttctcttcccatatctcgcagcaaatcatgcatgccaagcttgtttttatcatcaacgattacaaggct |
4351867 |
T |
|
| Q |
107 |
tcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagct |
206 |
Q |
| |
|
|| || ||||| || |||||||||||||| | ||||| |||| |||||||||| ||||||||||||| | | || |||||||||||||||||| |
|
|
| T |
4351866 |
tctctcaacaagaacctttattccaatttctgtgaaaagtctgcagctatttaatatacaaataacatcatttctgtctatcccaataaagaaacaagct |
4351767 |
T |
|
| Q |
207 |
atgtcaaggaatatt |
221 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
4351766 |
atgtcaaggaatatt |
4351752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 231
Target Start/End: Original strand, 6547184 - 6547379
Alignment:
| Q |
36 |
atttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaattt |
135 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||| ||| ||||||||| |||||||| ||||| ||||| || |||||||| || |||||||| | |
|
|
| T |
6547184 |
atttgtcttcccatgtctctcaacaaatcatgcattctaagcttgttcctattgtcaacagttacaaggcttcgctctacaaggactttaattccaatat |
6547283 |
T |
|
| Q |
136 |
cggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
| ||| ||| | ||| ||||||||||| ||||| |||||||| | |||| |||||||||||||||||||| ||||||||||||| ||| |||| |
|
|
| T |
6547284 |
cagcaaaaaatctacacccatttaatatttgtattgcatcatttttgtccatcccaataaagaaacaagctatatcaaggaatatttgtttgtctg |
6547379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 6674691 - 6674496
Alignment:
| Q |
36 |
atttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaattt |
135 |
Q |
| |
|
|||| |||||||||||||| ||| ||||||||||||| ||| ||||||||| |||||||| | ||| ||||| || | |||||| || |||||||| | |
|
|
| T |
6674691 |
atttgtcttcccatgtctctcaataaatcatgcattctaagcttgttcctattgtcaacagttagaaggcttcgctctaaaaggactttaattccaatat |
6674592 |
T |
|
| Q |
136 |
cggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
| ||| ||| || ||| ||||||||||| ||||| ||||||||||| |||| ||||||||||| |||||||| ||||||||||||| |||||||| |
|
|
| T |
6674591 |
cagcaaaaaattgacacccatttaatatttgtattgcatcatttcggtccatcccaataaagaagcaagctatatcaaggaatatttgtttctctg |
6674496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 44 - 231
Target Start/End: Complemental strand, 6649733 - 6649546
Alignment:
| Q |
44 |
tcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaatttcggcataa |
143 |
Q |
| |
|
||||||||||| |||||||||||||||| ||| ||||||||| |||||||| ||||| |||| || |||||||| || |||||||| || ||| || |
|
|
| T |
6649733 |
tcccatgtctcttaacaaatcatgcattctaagcttgttcctattgtcaacagttacaaggcttctctctacaaggactttaattccaatatcagcaaaa |
6649634 |
T |
|
| Q |
144 |
agttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
| | ||| ||||||||||| ||||| ||||||||||| |||| ||||||||||||||||| || ||||||||||||| |||||||| |
|
|
| T |
6649633 |
aatccactcccatttaatatttgtattgcatcatttcggtccattccaataaagaaacaagcaatatcaaggaatatttgtttctctg |
6649546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 6751562 - 6751340
Alignment:
| Q |
7 |
caggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagact |
106 |
Q |
| |
|
|||||||| |||||| | |||| ||| |||| |||||||||||||| ||||||||||||||||| ||| |||||| || |||||||| |||||||| |
|
|
| T |
6751562 |
caggatccagtggtgattcctcataaattatttgtcttcccatgtctctcaacaaatcatgcattctaagcttgttcccattgtcaacagttacaagact |
6751463 |
T |
|
| Q |
107 |
tcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagct |
206 |
Q |
| |
|
||| || | |||||| || |||||| || ||| ||| |||| ||||||||||| || || |||||||||||| |||| |||||||||||||| ||| |
|
|
| T |
6751462 |
tcgctctaaaaggactttcattccagaatcagcaaaaaacccacacccatttaatatttgaattacatcatttcggtccattccaataaagaaacaggct |
6751363 |
T |
|
| Q |
207 |
atgtcaaggaatatttctttctc |
229 |
Q |
| |
|
|| ||||||||||||| |||||| |
|
|
| T |
6751362 |
atatcaaggaatatttgtttctc |
6751340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 6499634 - 6499823
Alignment:
| Q |
42 |
cttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaatttcggcat |
141 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| ||| ||||||||| |||| | | | ||| ||||| || |||||||| || |||||||| || ||| |
|
|
| T |
6499634 |
cttcccatatctctcaacaaatcatgcattctaagcttgttcctattgtcaataattaaaaggcttcgctctacaaggactttaattccaatatcagcaa |
6499733 |
T |
|
| Q |
142 |
aaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
||| | |||| ||||||||||| ||||| |||||||||||| |||| ||||||||||| |||||||| ||||||||||| | |||||||| |
|
|
| T |
6499734 |
aaaatccacacccatttaatatttgtattacatcatttcggtccatcccaataaagaagcaagctatatcaaggaatatgtgtttctctg |
6499823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 6814460 - 6814265
Alignment:
| Q |
36 |
atttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaattt |
135 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||| ||| ||||||||| |||||||| ||||| ||| || |||||||| || |||||||| | |
|
|
| T |
6814460 |
atttgtcttcccatgtctcttcacaaatcatgcattctaagcttgttcctattgtcaacagttacaagggctcgctcaacaaggactttaattccaatat |
6814361 |
T |
|
| Q |
136 |
cggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
| ||| || | |||| ||||||||||| |||| |||||||||||| || | |||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
6814360 |
cagcaaaatatccacacccatttaatattcgtattacatcatttcggtccctcccaataaagaaacaagctatatcaaggaatatttgtttctctg |
6814265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 6757151 - 6756956
Alignment:
| Q |
36 |
atttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaattt |
135 |
Q |
| |
|
|||| |||||||||||||| ||||||| ||||||||| ||| ||||||| | ||||| || ||||| ||| || ||||| || || |||||||| | |
|
|
| T |
6757151 |
atttgtcttcccatgtctctcaacaaaccatgcattctaagcttgttcctgttgtcaacggttacaagggttcactctacaagaactttaattccaatat |
6757052 |
T |
|
| Q |
136 |
cggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
| ||| ||| | |||| ||||||||||| ||||| |||||||||| | || | |||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
6757051 |
cagcaaaaaatccacacccatttaatatttgtattacatcatttctgtccttcccaataaagaaacaagctatatcaaggaatatttgtttctctg |
6756956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 6623716 - 6623905
Alignment:
| Q |
42 |
cttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaatttcggcat |
141 |
Q |
| |
|
|||||||| |||| |||||| |||||||||| ||| ||||||||| |||||||| ||||| ||||| || |||||||| || |||||||| || ||| |
|
|
| T |
6623716 |
cttcccatatctctcaacaagtcatgcattctaagcttgttcctattgtcaacagttacaaggcttcgctctacaaggactttaattccaatatccgcaa |
6623815 |
T |
|
| Q |
142 |
aaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
||| |||| ||||||||||| | ||| |||||||| |||| ||||| |||||||| ||||| ||||||||||||| || ||||| |
|
|
| T |
6623816 |
aaaacccacacccatttaatatttttattgcatcatttttatccattccaatcaagaaacaggctatatcaaggaatatttgttgctctg |
6623905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 6771892 - 6771699
Alignment:
| Q |
36 |
atttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaattt |
135 |
Q |
| |
|
|||| ||| |||||||||| ||||||||||||||||| ||| |||| | | |||||||| ||||| ||| || | |||||| || |||||||| | |
|
|
| T |
6771892 |
atttgtctccccatgtctctcaacaaatcatgcattctaagcttgtttcctttgtcaacagtaacaagggctcgctcaagaaggactttaattccaatat |
6771793 |
T |
|
| Q |
136 |
cggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctc |
229 |
Q |
| |
|
| ||| ||| | |||| ||||||||||| ||||| ||||| ||| | | | |||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
6771792 |
cagcaaaaaatccacacccatttaatatttgtattacatcctttttgtctaccccaataaagaaacaagctatatcaaggaatatttgtttctc |
6771699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 6795130 - 6794937
Alignment:
| Q |
36 |
atttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaattt |
135 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||| ||| |||| ||| |||||||| ||||| || ||| ||||| || || |||||||| | |
|
|
| T |
6795130 |
atttgtcttcccatgtctcttaacaaatcatgcattctaagcttgttattattgtcaacagttacaagggctctttcaacaagaactttaattccaatat |
6795031 |
T |
|
| Q |
136 |
cggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctc |
229 |
Q |
| |
|
| ||| ||| | |||| ||||||||||| || || |||||||| | |||| ||||||||||| |||||||| ||||| ||||||| |||||| |
|
|
| T |
6795030 |
cagcaaaaaatccacacccatttaatatttgaattgcatcattttgatccatcccaataaagaagcaagctatatcaagaaatatttgtttctc |
6794937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 231
Target Start/End: Original strand, 6589318 - 6589513
Alignment:
| Q |
36 |
atttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaattt |
135 |
Q |
| |
|
|||| ||||||||| |||| |||| ||||||||||| || ||||||||| |||||||| ||||| ||| || ||||| || || || ||||| | |
|
|
| T |
6589318 |
atttgtcttcccatatctcttaacagatcatgcattcttagcttgttcctattgtcaacagttacaagggctcgctcaacaagaactttaatcccaatat |
6589417 |
T |
|
| Q |
136 |
cggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
| ||| ||| |||| ||||||||||| ||||| ||||| ||| | |||| ||||||||||||||||| || ||||||||||||| |||||||| |
|
|
| T |
6589418 |
cagcaaaaaacccacaaccatttaatatctgtattacatcctttttgtccatcccaataaagaaacaagcaatatcaaggaatatttgtttctctg |
6589513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 6834854 - 6834659
Alignment:
| Q |
36 |
atttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaattt |
135 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||| || ||| |||||| || |||||||| ||||| ||||| || | ||||| || |||||| | |
|
|
| T |
6834854 |
atttgtcttcccatgtctctcaacaaatcatgcactctaagcttgttcccattgtcaacagttacaaggcttcgctctaaaaggattttcattccagaat |
6834755 |
T |
|
| Q |
136 |
cggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
| ||| ||| |||| ||||||||||| || || ||||||||| || |||| |||||||||||||| ||||| || || ||||||| || ||||| |
|
|
| T |
6834754 |
cagcaaaaaacccacacccatttaatatttgaattacatcattttggtccatcccaataaagaaacaggctatatcgagaaatatttgttgctctg |
6834659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 6534939 - 6535128
Alignment:
| Q |
42 |
cttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaatttcggcat |
141 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||| |||| |||| |||||||| ||||| ||||| || || ||||| || | ||||| || ||| |
|
|
| T |
6534939 |
cttcccatgtctctcaacaaatcatgcattctaagtttgtttctattgtcaacagtaacaaggcttcgctctaccaggactttaactccaacatcagcaa |
6535038 |
T |
|
| Q |
142 |
aaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
||| |||| ||||||||||| | ||| ||||| || |||| ||||| |||||||| ||||| ||||||||||||| || ||||| |
|
|
| T |
6535039 |
aaaacccacacccatttaatatttttattgcatcagttttatccattccaatcaagaaacaggctatatcaaggaatatttgttgctctg |
6535128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 6726648 - 6726424
Alignment:
| Q |
7 |
caggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagact |
106 |
Q |
| |
|
||||||| | |||||| | |||| |||||||| ||||||||||||| ||||||||||||||||| |||| ||||| || |||||||| ||||| |
|
|
| T |
6726648 |
caggatcttctggtgattcctcaaaaatgatttgccttcccatgtctctcaacaaatcatgcattctaagtttgttctcattgtcaacagttacaagggc |
6726549 |
T |
|
| Q |
107 |
tcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagct |
206 |
Q |
| |
|
|| || |||||||| || |||||| || ||| ||| |||| ||||| ||||| || || |||| ||| | |||| |||||||||||||||||| |
|
|
| T |
6726548 |
tctctcaacaaggactttaattccatcatcagcaaaaaacccacacccattcaatatttggatcgcatcctttttgtccatcccaataaagaaacaagct |
6726449 |
T |
|
| Q |
207 |
atgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
|| ||||| ||||||| |||||||| |
|
|
| T |
6726448 |
atatcaagaaatatttgtttctctg |
6726424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 6714491 - 6714302
Alignment:
| Q |
42 |
cttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaatttcggcat |
141 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||| |||||| | |||||||| ||||| ||| |||||||| | |||||||| || || |
|
|
| T |
6714491 |
cttcccatgtctctcaacaaatcatgcattctaagcttgttcccaatgtcaacagttacaagggactgttgtacaaggacttcaattccaatatcaccaa |
6714392 |
T |
|
| Q |
142 |
aaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
|| | |||| ||||||||||| ||||| | ||||||| | |||| || |||||||||||||| || |||| |||||||| |||||||| |
|
|
| T |
6714391 |
aatatccacacccatttaatatttgtattatatcatttttgtccatcccgataaagaaacaagcaatatcaaagaatatttgtttctctg |
6714302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 22585593 - 22585804
Alignment:
| Q |
14 |
ctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttcc |
113 |
Q |
| |
|
||||||||| | |||| ||| ||| |||||||||| ||||||| |||||||||||||||||| |||||| ||||||||||| ||||||| |||| || |
|
|
| T |
22585593 |
ctttggtgattcctcaagaacaattcctcttcccatatctcgcagcaaatcatgcattccaagcctgttcttatcatcaacactcacaaggcttctctca |
22585692 |
T |
|
| Q |
114 |
acaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaa |
213 |
Q |
| |
|
|||||||| ||||||||||||| |||| |||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |||||| |||||||||||| |
|
|
| T |
22585693 |
acaaggacgcttattccaatttctgcatgaagtccacagtcatttaatatgagtataacatcatttcggtccattccaattaagaaaaaagctatgtcaa |
22585792 |
T |
|
| Q |
214 |
ggaatatttctt |
225 |
Q |
| |
|
|||||||||||| |
|
|
| T |
22585793 |
ggaatatttctt |
22585804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 9933 - 10157
Alignment:
| Q |
7 |
caggatcctttggtgacttctcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagact |
106 |
Q |
| |
|
|||||||| ||||||| || |||||||||||||| |||||||| ||||| || |||||||||||||||||| | ||| ||||||| ||||| | ||| || |
|
|
| T |
9933 |
caggatcccttggtgatttttcacgaatgatttcccttcccatatctcgtaataaatcatgcattccaagtgtattcttatcatcgacagttagaaggct |
10032 |
T |
|
| Q |
107 |
tcgttccacaaggacatttattccaatttcggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagct |
206 |
Q |
| |
|
||| || ||||||||| ||||||| || | ||| ||||| |||| ||||||||||| ||| ||||||| |||||| |||| |||||||||||||||||| |
|
|
| T |
10033 |
tcgctcaacaaggacacttattccgatattagcaaaaagtccacatccatttaatatttgtgtaacatcgtttcggtccatcccaataaagaaacaagct |
10132 |
T |
|
| Q |
207 |
atgtcaaggaatatttctttctctg |
231 |
Q |
| |
|
|||||||||||||| ||||| |||| |
|
|
| T |
10133 |
atgtcaaggaatatatctttttctg |
10157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 11171 - 11364
Alignment:
| Q |
36 |
atttctcttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaattt |
135 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||| ||| |||| ||| |||||||| ||||| || ||| ||||| || || |||||||| | |
|
|
| T |
11171 |
atttgtcttcccatgtctcttaacaaatcatgcattctaagcttgttattattgtcaacagttacaagggctctttcaacaagaactttaattccaatat |
11270 |
T |
|
| Q |
136 |
cggcataaagttcacagccatttaatatatgtataacatcatttcggaccatgccaataaagaaacaagctatgtcaaggaatatttctttctc |
229 |
Q |
| |
|
| ||| ||| | |||| ||||||||||| || || |||||||| | |||| ||||||||||| |||||||| ||||| ||||||| |||||| |
|
|
| T |
11271 |
cagcaaaaaatccacacccatttaatatttgaattgcatcattttgatccatcccaataaagaagcaagctatatcaagaaatatttgtttctc |
11364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 5386 - 5265
Alignment:
| Q |
42 |
cttcccatgtctcgcaacaaatcatgcattccaagtctgttcctatcatcaacagtcacaagacttcgttccacaaggacatttattccaatttcggcat |
141 |
Q |
| |
|
|||||||| |||| |||||| |||||||||| ||| ||||||||| |||||||| ||||| ||||| || |||||||| || |||||||| || ||| |
|
|
| T |
5386 |
cttcccatatctctcaacaagtcatgcattctaagcttgttcctattgtcaacagttacaaggcttcgctctacaaggactttaattccaatatccgcaa |
5287 |
T |
|
| Q |
142 |
aaagttcacagccatttaatat |
163 |
Q |
| |
|
||| |||| ||||||||||| |
|
|
| T |
5286 |
aaaacccacacccatttaatat |
5265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 3392763 - 3392812
Alignment:
| Q |
27 |
tcacgaatgatttctcttcccatgtctcgcaacaaatcatgcattccaag |
76 |
Q |
| |
|
||||||| ||||| |||||||||||||| | |||||||||||||||||| |
|
|
| T |
3392763 |
tcacgaacaatttcccttcccatgtctcgtagcaaatcatgcattccaag |
3392812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 3313741 - 3313701
Alignment:
| Q |
36 |
atttctcttcccatgtctcgcaacaaatcatgcattccaag |
76 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
3313741 |
atttctcgtcccatgtctcgcagtaaatcatgcattccaag |
3313701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 7165853 - 7165893
Alignment:
| Q |
36 |
atttctcttcccatgtctcgcaacaaatcatgcattccaag |
76 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
7165853 |
atttctcttcccatgtctctaagcaaatcatgcattccaag |
7165893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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