View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9690_low_8 (Length: 375)
Name: NF9690_low_8
Description: NF9690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9690_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 344; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 38357551 - 38357910
Alignment:
| Q |
1 |
actactagcagccataccttgaatgattctctcaattttactgcgttcttcttcatcaaggaacttcctcgcgccgttactatcaatatagtttgtacac |
100 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
38357551 |
actactagcagccataacttgaatgattctctcaattttactccgttcttcttcatcaagggacttcctcgcgccgttactatcaatatagtttgtacac |
38357650 |
T |
|
| Q |
101 |
attgcaagtatcatctctgcagctcctttccaatgcacgtgaacgctgttgtcgtcgttctctttccttatagcaacaccgcttcgtttcttctccgagt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38357651 |
attgcaagtatcatctctgcagctcctttccaatgcacgtgaacgctgttgtcgtcgttctctttccttatagcaacaccgcttcgtttcttctccgagt |
38357750 |
T |
|
| Q |
201 |
taaatgtttcaacatgaaggactttatgcttctgtttcatttcatccatgtccatacccaaatccaatactgcccacatgagtatagctttctccgttgg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38357751 |
taaatgtttcaacatgaaggactttatgcttctgtttcatttcatccatgtccatacccaaatccaatactgcccacatgagtatagctttctccgttgg |
38357850 |
T |
|
| Q |
301 |
actccctgaaatttcaggttcagaaccagatggaggcttgtagacactaccagttgtatt |
360 |
Q |
| |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
38357851 |
actccctgaaatttcaggttcagaaccagatggaggattgtagacactaccagttgtatt |
38357910 |
T |
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