View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9691_high_4 (Length: 272)
Name: NF9691_high_4
Description: NF9691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9691_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 263
Target Start/End: Complemental strand, 35688675 - 35688431
Alignment:
| Q |
19 |
catggccaatgattttttaccaaatcagatgcatcaactttgttcatgttggagatctcgaactaccacatagctgatattgaaactgaatgcaaattca |
118 |
Q |
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| T |
35688675 |
catggccaatgatcttttaccaaatcagatgcaacaactttgtccatgttggagatctcgaactaccacatagctgatattgaaactgaatgcaaattca |
35688576 |
T |
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| Q |
119 |
ccagttcagtgaacaccaatgtattcattctatctcttcctctctctacataattaatgaagtagtactgtattttatgttgttgtttgcaccttatcat |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
35688575 |
ccagttcagtgaacaccaatgtattcattctatctcttcctctctctacataattaatgaagtagtactatattttatgttgttgtttgcaccttatcat |
35688476 |
T |
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| Q |
219 |
catataaataaagaaaaatcaaagaaccggatcagaatactctgc |
263 |
Q |
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|||||||||||||||||||||||||||| ||||||||| |||||| |
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| T |
35688475 |
catataaataaagaaaaatcaaagaacctgatcagaattctctgc |
35688431 |
T |
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