View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9692_high_6 (Length: 322)
Name: NF9692_high_6
Description: NF9692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9692_high_6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 19 - 322
Target Start/End: Original strand, 44802038 - 44802338
Alignment:
| Q |
19 |
ataaggctgggcacctggtcttggtgatatttgcaaccaagtatcaatggcggttaactttgtaagataatttatgatcccattatattccagtaactcg |
118 |
Q |
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| T |
44802038 |
ataaggctgggcacctggtcttcgtgatatttgcaaccaagtatcaatggcggttaactttttaagataatttatgatcccattatattccagtaactcg |
44802137 |
T |
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| Q |
119 |
tcaatactaagactggaaatgctaaagttcgctacattaattaattaatgaaattaaactttgagaaattatacgtgagaagtgagagcactcgaatact |
218 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44802138 |
tcaatactaagactggaaatgctaaagttcgcta---acattaattaatgaaattaaactttgagaaattatacgtgagaagtgagagcactcgaatact |
44802234 |
T |
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| Q |
219 |
caatgtcttggagtaattgctctttaactagataaccaaattaagcataagttacataactgtgtagtagatcttgattctgatactgatatctccctta |
318 |
Q |
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|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
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| T |
44802235 |
caatgtcttggagtaattgctctttaacatgataaacaaattaagcataagttacataactgtgtagtagatcttcattctgatactgatatctccttta |
44802334 |
T |
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| Q |
319 |
attt |
322 |
Q |
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|||| |
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| T |
44802335 |
attt |
44802338 |
T |
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