View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9692_low_21 (Length: 227)
Name: NF9692_low_21
Description: NF9692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9692_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 5649663 - 5649447
Alignment:
| Q |
1 |
ttactgttctcttaatcaggaatgtcaaatattgcaagggcagtcaagaagaatgaatattctaaagattacttgtttttatttcatattcatttggttt |
100 |
Q |
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| T |
5649663 |
ttactgttctcttaatcaggaatgtcaaatattgcaagggcagtcaagaagaatgaatattctaaagattacttgtttttatttcatattcatttggttt |
5649564 |
T |
|
| Q |
101 |
ttgacatgatgttcatgctcctaaataactagaatgattttgaaccatcgtcattggtgtgccgtatttaacaggggtaagactgttaatgggaatgtga |
200 |
Q |
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| T |
5649563 |
ttgacatgatgttcatgctcctaaataactagaatgattttgaaccatcgtcattggtgtgccgtatttaacaggggtaagactgttaatgggaatgtga |
5649464 |
T |
|
| Q |
201 |
aaatgaactaacctatg |
217 |
Q |
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||||||||||||||||| |
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| T |
5649463 |
aaatgaactaacctatg |
5649447 |
T |
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