View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9692_low_23 (Length: 216)
Name: NF9692_low_23
Description: NF9692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9692_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 48451005 - 48450819
Alignment:
| Q |
17 |
agaagaggtttgcttgccaagatgctaaggagtctgaaccctgcaa----caacatgaaacaaaaacatttgtcaaatttaaccaatattatatagcctg |
112 |
Q |
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| T |
48451005 |
agaagaggtttgcttgccaagatgctaaggagtctgaaccctgcaagcaacaacatgaaacaaaaacatttgtcaaatttaatcaatattatatagcctg |
48450906 |
T |
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| Q |
113 |
atggtacaactataattaccaaatactagttaaggaattacctgaattacaaagcatcgagtgtaattactgaaatcatcacaaaca |
199 |
Q |
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| T |
48450905 |
atggtacaactataagtaccaaatactagttaaggaattacctgaattacaaagcatcgagtgtaattactgaaatcatcacaaaca |
48450819 |
T |
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