View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9693_low_3 (Length: 475)
Name: NF9693_low_3
Description: NF9693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9693_low_3 |
 | |
|
| [»] scaffold0003 (4 HSPs) |
| | |
|
| [»] scaffold0172 (2 HSPs) |
| | |
|
| [»] scaffold0655 (3 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 311; Significance: 1e-175; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 102 - 468
Target Start/End: Complemental strand, 44669311 - 44668945
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
44669311 |
cccaccattgggtaataactcctaaaaattcgatgttcagtaccccaccattggacattattctgaatcatcaaatgcatatgaatcgccactaccccac |
44669212 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
44669211 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccattgggcatttgtctgagtcatctaatgcatgaatgtctccgtaaatacccctccgt |
44669112 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
44669111 |
tgggtaatctccaaaaaatcaaaagtctaatatcccacctttggatataattttgaatcaccattttagttagttaaggttattcacccataaacaaata |
44669012 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
44669011 |
gtatttacattaaaacaacaccacataaataatacacataatattcatgccaaaacaacaacaccaa |
44668945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 102 - 469
Target Start/End: Original strand, 3896939 - 3897305
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||| |
|
|
| T |
3896939 |
cccaccattgggtaataactcctaaaaattcgatgtttggtaccccaccattagacattattctgaatcacgtaatgcatatgaattgccactaccccac |
3897038 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| ||||||||||||| ||||||||||| |||| || |||||| ||| |||| ||||| ||||||||||||||||||| ||||| |||||||||||| || |
|
|
| T |
3897039 |
cgttgggtagtaacttttaaaactcgattgtcaatgtcccaccattgggcatctgtctgagtcatctaatgcatgaatgtctccttaaataccccactgt |
3897138 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccat--aaacaaa |
399 |
Q |
| |
|
||||||||||| ||||||||||||||| |||| ||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||| ||| ||| |
|
|
| T |
3897139 |
tgggtaatctc-ctaaaatcaaaagtctagtatctcacctttggatatagttttgaatcaccattatagttactt---gttattcacccattaaaaaaaa |
3897234 |
T |
|
| Q |
400 |
aagtatttacattaaaccaacaccacataaataat-acacataatattcatgccaaaacaacaccaccaaa |
469 |
Q |
| |
|
|||||| | ||||| |||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
3897235 |
tagtattcatgttaaaacaacaccacacaaataataacacatgatattcatgccaaaacaacaccaccaaa |
3897305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 102 - 468
Target Start/End: Original strand, 5536730 - 5537095
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5536730 |
cccaccattggataataactcctaaaaattcgatgttcaggaccccaccattgggcatcattctgaatcatctaatgcatatgaatcgtcactaccccac |
5536829 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||| |||| | |
|
|
| T |
5536830 |
cattgggtaataactcctaaaactcgatgttcagtaccccaccattgggcatttgtctgagtcatctaatgcatgaatgtctccgtaaatacctcaccat |
5536929 |
T |
|
| Q |
302 |
tgggtaatctct-aaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaa |
400 |
Q |
| |
|
||| |||| || ||||| | ||||| ||||||| ||||||||| ||| ||||||||| ||||||||||||||||||| || ||||||||||| |
|
|
| T |
5536930 |
tggataataactccttaaatc-taggtctagtatcccagcgttggatatagtttagaatcacca-tttagttacttaaggttatgcatccataaacaaag |
5537027 |
T |
|
| Q |
401 |
agtatttacattaaaccaacaccacataaataat-acacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
|||||||| ||||| ||||||||| ||||||| ||||||||||||||| ||||| ||| |||||||| |
|
|
| T |
5537028 |
agtatttattttaaaataacaccacacaaataataacacataatattcataccaaagcaa-accaccaa |
5537095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 102 - 378
Target Start/End: Complemental strand, 6818975 - 6818698
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||||| |||| | ||||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
6818975 |
cccacccttgggtaataactcctaaaaattcgatcttcagtaccccactgttgggctttattttgaatcacctaatgcatatgaatcgtcactaccccat |
6818876 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
||||||||| ||||||||||||||||||| || || ||||||| ||| ||| |||| ||||||||||||||| ||| ||||| ||||||||||||| | |
|
|
| T |
6818875 |
cattgggtaataactcctaaaactcgatgttcggtaccccaccattggacatcagtctgagtcatctaatgcataaatgtctccataaataccccaccat |
6818776 |
T |
|
| Q |
302 |
tgggtaatctct-aaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaa |
378 |
Q |
| |
|
|||||||| || || || |||||||| |||||||| |||||||||| |||| |||||||| ||||||||||||| |
|
|
| T |
6818775 |
tgggtaataactcctcaactctaaagtctagtatcccacctttggatatagttttaaatcaccaatttagttacttaa |
6818698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 5536610 - 5536702
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
||||||||| |||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
5536610 |
actaaaatgtgttagtccttaatggtcaatctatatgtgcatgctcatgatccggatttcacctctaaacggagccaattgtcccacgattgg |
5536702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 44669431 - 44669339
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
44669431 |
actaaaatgcgttaattcctattggtcagtctatatgcaaatgctcatgatccggatttcacctctaaacggagccaaatgtcccaccattgg |
44669339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 6819095 - 6819003
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
||||||||| |||| | |||| |||||| |||||||| |||||||||||| ||||||||||||||| | ||||||| |||||||||||||| |
|
|
| T |
6819095 |
actaaaatgtgttaatccctattggtcagtctatatgcaaatgctcatgattcggatttcacctctaagcagagccaaatgtcccaccattgg |
6819003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 304; Significance: 1e-171; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 20 - 468
Target Start/End: Complemental strand, 1311987 - 1311537
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgggtaataa |
119 |
Q |
| |
|
|||||||||||||| || ||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1311987 |
actaaaatgcgttaatttctattggtcagtctatatgcaaatgctcatgatccggatttcacctctaaacggagccaaatgtcccaccattgggtaataa |
1311888 |
T |
|
| Q |
120 |
ctcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccaccattgggtagtaactcct |
219 |
Q |
| |
|
| ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
1311887 |
cccctaaaaattcgatgttcagtaccccaccattgggcattattctgaatcacctaatgcatatgaatcgccactaccccaccgttgggtagtaactcct |
1311788 |
T |
|
| Q |
220 |
aaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgttgggtaatctctaaaaaa |
319 |
Q |
| |
|
||||||||||| ||| ||||||||| ||| |||||||||| ||||||||||||||||||| |||| |||||||||||||| |||||||||||| ||||| |
|
|
| T |
1311787 |
aaaactcgatgatcaatgccccaccattgggcatttgtctgagtcatctaatgcatgaatgtctctgtaaataccccacc-ttgggtaatctc-caaaaa |
1311690 |
T |
|
| Q |
320 |
tcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggt----tattcacccataaacaaaaagtatttacattaaa |
415 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
1311689 |
tcaaaagtctaatatcccacctttggatatagttttgaatcatcattttagttacttaaggttatatattcacccataaacaaatagtatttacattaaa |
1311590 |
T |
|
| Q |
416 |
ccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1311589 |
acaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
1311537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 102 - 468
Target Start/End: Complemental strand, 19933162 - 19932797
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||| | ||||||||||| |
|
|
| T |
19933162 |
cccaccattgggtaataactcctaaaaattcgatgttcagtatcccaccattgggcattattctgaatcacctaatgcatatgaattgccactaccccac |
19933063 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| ||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
19933062 |
cgttgagtagtaactcctaaaactcgatggtcagtaccccaccattgggcatttgtctgagtcatctaatgcatgaatgtctccgtaaataccccaccgt |
19932963 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
19932962 |
tgggtaatctc-ctaaaatcaaaagtctaatatcccacctttggatatagttttgaatcaccattttagttacttaaagttattcacccataaacaaata |
19932864 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19932863 |
gtatttacattaaaacaacaccacagaaataatacacataatattcatgccaaaacaccaccaccaa |
19932797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 20 - 468
Target Start/End: Complemental strand, 3225268 - 3224800
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg------- |
112 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
3225268 |
actaaaatgcgttagtccctaatggtcagtctatatgca-atgctcatgatccggatttcacctctaaacggagccaaatgtcccaccattggacaatat |
3225170 |
T |
|
| Q |
113 |
-------------gtaataactcctaaaaattcgatgttcaatacccc-accattggacattattctgaatcatctaatgcatatgaatcgtcactaccc |
198 |
Q |
| |
|
||||||||||||||||||| |||||| | |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3225169 |
accccaccattgggtaataactcctaaaaatttgatgtttagtacccccaccgatgggtattattctgaatcatctaatgcatatgaatcgtcactaccc |
3225070 |
T |
|
| Q |
199 |
caccattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccac |
298 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
3225069 |
caccgttgggtaataactcctaaaactcgatggtcagtgccccgccattgggcatttgtctgagtcatctaatgcatgagtgtctccgtaaataccccac |
3224970 |
T |
|
| Q |
299 |
cgttgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaa |
398 |
Q |
| |
|
||||| |||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3224969 |
cgttgagtaatctc-ctaaaatcaaaagtctagtatcccacctttggatatagttttgaatcaccattttagttacttaaggttattcacccataaacaa |
3224871 |
T |
|
| Q |
399 |
aaagtatttacattaaaccaacaccacataaataat-acacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
| | |||||| ||||| |||||||||||||||||| |||||||||||||||| |||||||||| |||||| |
|
|
| T |
3224870 |
ataatatttatgttaaaacaacaccacataaataataacacataatattcatgtcaaaacaacaacaccaa |
3224800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 20 - 455
Target Start/End: Original strand, 11034479 - 11034914
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgggtaataa |
119 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11034479 |
actaaaatgcgttagtccctaatggtcaatctatatgtgcgtgctcatgattcgtatttcacctctaaacggagccaattgtcccaccattgggtaataa |
11034578 |
T |
|
| Q |
120 |
ctcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccaccattgggtagtaactcct |
219 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
11034579 |
ctcctaaaaattcgatgttcagtaccccaccattgggcattattctgaatcatttaatgcatatgaattgtcactaccccaccattgggtaataactcct |
11034678 |
T |
|
| Q |
220 |
aaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgttgggtaatctct-aaaaa |
318 |
Q |
| |
|
||||||||||| ||||| ||||||||||| |||||||||| ||||||||||| ||||||| |||| |||||| ||||| | || |||||| || || |
|
|
| T |
11034679 |
aaaactcgatgttcagtaccccaccgttgggcatttgtctgagtcatctaatacatgaatgtctctgtaaatgccccatcattaggtaataactccttaa |
11034778 |
T |
|
| Q |
319 |
atcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaagtatttacattaaacca |
418 |
Q |
| |
|
||| |||| || |||||||| ||||||||| ||| ||||||||| ||||||||| ||||||||| || ||||||||||| |||||||| ||||| || |
|
|
| T |
11034779 |
atc-taagtttagtatcccaccgttggatatagtttagaatcacca-tttagttacgtaaggttatgcatccataaacaaagagtatttatgttaaaaca |
11034876 |
T |
|
| Q |
419 |
acaccacataaataat-acacataatattcatgccaaa |
455 |
Q |
| |
|
||| |||| ||||||| ||| ||||||||||| ||||| |
|
|
| T |
11034877 |
acaacacacaaataataacaaataatattcataccaaa |
11034914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 19933282 - 19933190
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||| | |||| |||||| |||||||| |||| |||||| ||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
19933282 |
actaaaatgcgttaatccctattggtcagtctatatgccaatgcacatgatccggatttcacctctaaacggagccaaatgtcccgccattgg |
19933190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 279; Significance: 1e-156; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 102 - 468
Target Start/End: Complemental strand, 3510262 - 3509898
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
3510262 |
cccaccattgggtaataactcctaaaaatttgatgttcagtaccccaccattgggcattattctgaatcacctaatgcatatgaatcgccactaccccac |
3510163 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3510162 |
cgttgggtagtaactcctaaaactcgatggtcagtaccccaccattgggcatttgtctgagtcatctaatgcatgaatgtctccgtaaataccccaccgt |
3510063 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
3510062 |
tgggtaatctc-caaaaatcaaaagtctaatatcccacctttggatatagttttgaatcaccattttagttacttaagtttattcacccataaacaaata |
3509964 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
3509963 |
gtatttacattaaaacaacaccacataaataata-acataatattcatgccaaaacaacaacaccaa |
3509898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 102 - 468
Target Start/End: Complemental strand, 24541072 - 24540706
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
24541072 |
cccaccattgggtaataactcctaaaaattcggtgttcagtaccccaccattgggcattattctgaatcacctaatgcatatgaatcgccactaccccac |
24540973 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| ||||||||||| || ||||| |||||||||||||||||||| ||| |||||||||| |||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
24540972 |
cgttgggtagtaaatcataaaaatcgatggtcagtgccccaccattgggcatttgtctgagtcatctaatgcatgaaagtctcttaaaataccccaccgt |
24540873 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||||||| ||||||||||| | |
|
|
| T |
24540872 |
tgggtaatctccaaaaaatcaaaagtctaatatcccacctttggatatagttttgaatcgccatttcagttacttaaggttattcaaccataaacaaaga |
24540773 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24540772 |
ttatttacattaaaacaacacaacataaataatacacataatattcatgccaaaacaacaccaccaa |
24540706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 102 - 425
Target Start/End: Complemental strand, 15278271 - 15277948
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||| ||| |||||||||| |||||| |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
15278271 |
cccaccattgggtaataaatcctaaaaatttgatgttcagtactccaccattgggcattatactgaatcacctaatgcatatgaatcgccactaccccac |
15278172 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcga-tggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccg |
300 |
Q |
| |
|
| ||||||| |||||| ||||||||| | | |||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
15278171 |
cgttgggtaataactcacaaaactcgatttgccagtgccctaccattgggcatttgtctaagtcatctaatgcatgaatgtctccgtaaataccccaccg |
15278072 |
T |
|
| Q |
301 |
ttgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaa |
400 |
Q |
| |
|
|||||||||||| ||||| ||||||||| |||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
15278071 |
ttgggtaatctc-ctaaaattaaaagtctagtatcccacctttggatatagttttgaatcaccatttaagttgcttaaggttattcacccataaacaaat |
15277973 |
T |
|
| Q |
401 |
agtatttacattaaaccaacaccac |
425 |
Q |
| |
|
|||||||| ||||| ||||||||| |
|
|
| T |
15277972 |
agtatttatgttaaaacaacaccac |
15277948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 34518341 - 34518465
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| || |
|
|
| T |
34518341 |
cccaccattgggtaataactcctaaaaattcgatgttcagtaccccaccattggacattattctgaattatccaatgtatatgaatcgtcactaccctac |
34518440 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactc |
226 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
34518441 |
cattgggcagtaactcctaaaactc |
34518465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 34514392 - 34514519
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||| ||| |||||||||| |||| ||||||||||| ||||||||||||| |||||||||| || |
|
|
| T |
34514392 |
cccaccattaggtaataactcctaaaaatttgatgttcagtactccaccattgggcatttctctgaatcatccaatgcatatgaatggtcactaccctac |
34514491 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgat |
229 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
34514492 |
cattgggtagtaactcctaaaactcgat |
34514519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 34514273 - 34514364
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattg |
111 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
34514273 |
actaaaatgcgttagtccctaatggtcaatctatatgtgcatgctcatgatccggatttcaccactaaacggagccaattgtcccaccattg |
34514364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 34518219 - 34518313
Alignment:
| Q |
18 |
taactaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
34518219 |
taactaaaatgcgttagtccctaatggtcaatctacatgtgcatgctcataatctggatttcaccactaaacggagccaattgtcccaccattgg |
34518313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 134 - 279
Target Start/End: Complemental strand, 21441993 - 21441848
Alignment:
| Q |
134 |
atgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccaccattgggtagtaactcctaaaactcgatggtc |
233 |
Q |
| |
|
||||||| || ||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||| || |
|
|
| T |
21441993 |
atgttcagtatcccacagttggacattattttgaatcacctaatgcatatgaatcgtcaataccccactattggataataactcctaaaactcgatgttc |
21441894 |
T |
|
| Q |
234 |
agtgccccaccgttgagcatttgtctaagtcatctaatgcatgaat |
279 |
Q |
| |
|
| | ||||||| || ||||||||| ||||| ||| ||||| |||| |
|
|
| T |
21441893 |
aataccccaccattaggcatttgtccaagtcctcttatgcacgaat |
21441848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 15278391 - 15278299
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||| | |||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
15278391 |
actaaaatgcgttaatccctattggtcagtctatatgaaaatgctcatgatccggatttcacctctaaacggagccaaatgtcccaccattgg |
15278299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 24541191 - 24541101
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattg |
111 |
Q |
| |
|
|||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
24541191 |
actaaaatgcgttagtccctaacggtcagtctatatgca-atgctcatgatccggatttcacctataaacggagccaaatgtcccaccattg |
24541101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 3510342 - 3510290
Alignment:
| Q |
60 |
atgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
3510342 |
atgctcatgatccggatttcacctctaaacggagccaaatgtcccaccattgg |
3510290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 8910477 - 8910397
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatat |
183 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||| | || |||| | |||| ||||||||||||||| |||||||||| |
|
|
| T |
8910477 |
cccaccattgggtaataactcttaaaaatttgatgtctagta-cccaacgttgggcattattctgaatcacttaatgcatat |
8910397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 21441930 - 21441880
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccatt |
153 |
Q |
| |
|
||||| ||||| ||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
21441930 |
cccactattggataataactcctaaaact-cgatgttcaataccccaccatt |
21441880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 275; Significance: 1e-153; HSPs: 4)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 102 - 468
Target Start/End: Complemental strand, 10789 - 10425
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| ||||| |
|
|
| T |
10789 |
cccaccattgggtaataactcctaaaaattcgatgttcagtaccccaccattgggcattattctgaatcacctaattcatatgaatcgccactatcccac |
10690 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10689 |
cgttgggtagtaactcctaaaactcgatggtcagtgccccaccattggacatttgtctgagtcatctaatgcatgaatgtctccgtaaataccccaccgt |
10590 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
10589 |
tgggtaatctc-caaaaatcaaaagtctaatatcccacctttggatatagttttgaatcaccattttagttacttaagtttattcacccataaacaaata |
10491 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10490 |
gtatttacattaaaacaacaccacaaaaataata-acataatattcatgccaaaacaacaccaccaa |
10425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 10909 - 10817
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||| |||||| |||||| |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10909 |
actaaaatgcgttaattcctattggtcagtctatatgcaaatgctcatgatccagatttcacctctaaacggagccaaatgtcccaccattgg |
10817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 10695 - 10616
Alignment:
| Q |
101 |
tcccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcat |
181 |
Q |
| |
|
||||||| ||||||| |||||||| |||| |||||| ||| | ||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
10695 |
tcccaccgttgggtagtaactcct-aaaactcgatggtcagtgccccaccattggacatttgtctgagtcatctaatgcat |
10616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 10792 - 10731
Alignment:
| Q |
194 |
taccccaccattgggtagtaactcct-aaaactcgatggtcagtgccccaccgttgagcatt |
254 |
Q |
| |
|
||||||||||||||||| |||||||| |||| |||||| ||||| ||||||| ||| ||||| |
|
|
| T |
10792 |
taccccaccattgggtaataactcctaaaaattcgatgttcagtaccccaccattgggcatt |
10731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 275; Significance: 1e-153; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 102 - 468
Target Start/End: Complemental strand, 16422077 - 16421713
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| ||||| |
|
|
| T |
16422077 |
cccaccattgggtaataactcctaaaaattcgatgttcagtaccccaccattgggcattattctgaatcacctaattcatatgaatcgccactatcccac |
16421978 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16421977 |
cgttgggtagtaactcctaaaactcgatggtcagtgccccaccattggacatttgtctgagtcatctaatgcatgaatgtctccgtaaataccccaccgt |
16421878 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
16421877 |
tgggtaatctc-caaaaatcaaaagtctaatatcccacctttggatatagttttgaatcaccattttagttacttaagtttattcacccataaacaaata |
16421779 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16421778 |
gtatttacattaaaacaacaccacaaaaataata-acataatattcatgccaaaacaacaccaccaa |
16421713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 102 - 468
Target Start/End: Original strand, 48186294 - 48186659
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
48186294 |
cccaccattgggtaataactcctaaaaattcgatgttcagtaccccatcattgggcatttttctgaatcatctaatgcatatgaatcgtcactacaccac |
48186393 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48186394 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccattgggcatttgtctgagtcatctaatgcatgaatatctccgtaaataccccaccgt |
48186493 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
||| ||| ||| |||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
48186494 |
tggataaactc-ctaaaatcaaaagtctaataccccaccattggatatagttttgaatcaccattttagttacttaaggttattcacccataaacaaata |
48186592 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
48186593 |
gtatttacatgaaaacaacaccacaaaaataatacacataatattcatgccaaaacaacaacaccaa |
48186659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 145 - 468
Target Start/End: Original strand, 21267896 - 21268216
Alignment:
| Q |
145 |
cccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccaccattgggtagtaactcctaaaactcgatggtcagtgccccacc |
244 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
21267896 |
cccaccattgggcattattctgaatcatctaatgcatatgaatcgtcactaccccaccattgggtagtaactcctaaaactcgatggtcagtgccacacc |
21267995 |
T |
|
| Q |
245 |
gttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgttgggtaatctctaaaaaatcaaaagtctaatatcccacatttg |
344 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||| |
|
|
| T |
21267996 |
gttgggcatttgtctgagtcatctaatgcatgaatatctccgtaaataccccaccgttgggtaactcct--aaaatcaaaagtctaatatcccaccattg |
21268093 |
T |
|
| Q |
345 |
gatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaagtatttacattaaaccaacaccacataaataatacacataata |
444 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| |||||||||||||||||||| ||||||| |
|
|
| T |
21268094 |
gatatagttttgaatcaccattttagttacttaaggttattcacccataaacaaataatatttatattaaa-caacaccacataaataatacccataata |
21268192 |
T |
|
| Q |
445 |
ttcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
||||||| ||||||||| |||||| |
|
|
| T |
21268193 |
ttcatgcaaaaacaacatcaccaa |
21268216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 102 - 465
Target Start/End: Complemental strand, 28393415 - 28393053
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
28393415 |
cccaccattggataataaatcctaaaaattcgatgttcggtaccccaccattggaaattattatgaatcatctaatgcatatgaatcgctactaccccac |
28393316 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||| | | |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28393315 |
cgttgggtaataactcctaaaactcgatggtcagtgccccaccattgggcatttatttgagtcatctaatgcatgaaagtctccgtaaataccccaccgt |
28393216 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
||||||||||| | |||||||||||| || |||||||| |||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| | |
|
|
| T |
28393215 |
tgggtaatctc-ataaaatcaaaagtttagtatcccacctttggatatagttttgaatcacaattttagttgtttaaggttatttacccataaacaaata |
28393117 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccac |
465 |
Q |
| |
|
||||||| ||||| ||||||||| |||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
28393116 |
gtatttatgttaaaacaacaccactaaaataatacacataatgttcatgccaaaacaccaccac |
28393053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 102 - 468
Target Start/End: Complemental strand, 28384499 - 28384134
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
|||| ||||||| |||| ||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||||| |
|
|
| T |
28384499 |
cccaacattgggcaatacctcctaaaaattcgatgttcagtaccccaccattgggcattattctgaatgatctaatgcatatgaatcgctaccaccccac |
28384400 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| |||||| ||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| | ||||||||||| ||||||| |
|
|
| T |
28384399 |
cgctgggtaataaatcctaaaactcgatggtcagtgccccaccattgggcatttgtctgagtcatctaatgcatgaaagtatccgtaaatactccaccgt |
28384300 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
|||||||| || |||||||||||| || |||||||| |||||||||| |||||||| |||||||||||| |||||||||||| | ||||||||||| | |
|
|
| T |
28384299 |
tgggtaatttc-ctaaaatcaaaagtttagtatcccacctttggatatagttttgaattaccattttagttgcttaaggttatttatccataaacaaata |
28384201 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
||||||| ||||| |||||||| | |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28384200 |
gtatttatgttaaaacaacaccaaaaaaataatacacataatgttcatgccaaaacaacaccaccaa |
28384134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 102 - 468
Target Start/End: Original strand, 11283026 - 11283391
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11283026 |
cccaccattgggtaataacacctaaaaattcgatgttcagtaccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
11283125 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| ||||||| ||||||||||||||||||| | ||| ||||||||| | | |||||||| ||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
11283126 |
cgttgggtaataactcctaaaactcgatgtttagtaccccaccgtagggtatttgtctgagtcatctaatgcatgaatgtctccgtaaataccccaccat |
11283225 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
|||||||| || ||| || |||| |||||||| ||||||||| || |||||||| ||||| |||||||||||||||| ||||||||||| | |
|
|
| T |
11283226 |
tgggtaataactccttaattctaaatctagtatcccaccattggatatagttaaaaatcacca-tttagctacttaaggttattcatccataaacaaaga |
11283324 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataat-acacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
||||||| ||||| ||||||||| ||||||| ||||||||||||||| ||||| ||| |||||||| |
|
|
| T |
11283325 |
gtatttatgttaaaataacaccacacaaataataacacataatattcataccaaagcaa-accaccaa |
11283391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 102 - 449
Target Start/End: Original strand, 12528360 - 12528707
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12528360 |
cccaccattggataataactcctaaaaattcaattttcagtaccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
12528459 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
||||||||| ||||||||||||||||||| || || |||||| |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
12528460 |
cattgggtaataactcctaaaactcgatgttcggtaccccactgttgggcatttttctaagtcatctaatgcatgaatgtctccgtaaataccccaccat |
12528559 |
T |
|
| Q |
302 |
tgggtaatctct-aaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaa |
400 |
Q |
| |
|
||||||| || ||||| ||||||| |||||||| ||||||||| ||| ||||||||| ||||||||||||||||||| || ||||||||||| |
|
|
| T |
12528560 |
tgggtaacaactccttaaatc-taagtctagtatcccaccgttggatatagtttagaatcacca-tttagttacttaaggttatgcatccataaacaaag |
12528657 |
T |
|
| Q |
401 |
agtatttacattaaaccaacaccacataaataat-acacataatattcat |
449 |
Q |
| |
|
| |||||| ||||| ||||||||| ||||||| ||||||||||||||| |
|
|
| T |
12528658 |
attatttatgttaaaataacaccacacaaataataacacataatattcat |
12528707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 102 - 435
Target Start/End: Original strand, 12502730 - 12503062
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12502730 |
cccactattgggaaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
12502829 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||| ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||| |||| | |
|
|
| T |
12502830 |
cattgggtaataactcctaaaactcgatgttcagtaccccaccgttgggcatttttctgagtcatctaatgcatgaatgtctccgtaaatacctcaccat |
12502929 |
T |
|
| Q |
302 |
tgggtaatctct-aaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaa |
400 |
Q |
| |
|
|| |||| || ||||| ||||||| ||| |||| ||||||||| ||| ||||||||| ||||||||||||||||||| || ||||||||||| |
|
|
| T |
12502930 |
tgagtaacaactccttaaatc-taagtctagtattccaccgttggatatagtttagaatcacca-tttagttacttaaggttatgcatccataaacaaag |
12503027 |
T |
|
| Q |
401 |
agtatttacattaaaccaacaccacataaataata |
435 |
Q |
| |
|
|||||||| ||||| ||||||||| |||||||| |
|
|
| T |
12503028 |
agtatttatgttaaaataacaccacacaaataata |
12503062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 20 - 435
Target Start/End: Complemental strand, 36018453 - 36018044
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgggtaata- |
118 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
36018453 |
actaaaatgcgttagtccctaatggtcaatatatatgtgcatgctcatgatccggatttcacctctaaacggagccaattgtcccaccattggacaatat |
36018354 |
T |
|
| Q |
119 |
actcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccaccattgggtagtaactcc |
218 |
Q |
| |
|
|| || | ||| | |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36018353 |
acccc--accattggg----caataccccaccattggacatttttttgaatcatctaatgcatatgaatcgtcactaccccaccattgggtaataactcc |
36018260 |
T |
|
| Q |
219 |
taaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgttgggtaatctct-aaaa |
317 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||| |||| |||||||||||||| ||| |||| || | |
|
|
| T |
36018259 |
taaaactcgatgttcagtaccccaccgttggacatttgtctgagtcatctaatgcatgaatgtctctgtaaataccccaccattgaataataactcctta |
36018160 |
T |
|
| Q |
318 |
aatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaagtatttacattaaacc |
417 |
Q |
| |
|
|||| ||||||| ||| |||| |||||||||| | | |||| |||| |||||||| |||||||||| || ||||||||||| |||||||| ||||| | |
|
|
| T |
36018159 |
aatc-taagtctagtataccacctttggatatagtctagaattacca-tttagttagttaaggttatgcatccataaacaaagagtatttatgttaaaac |
36018062 |
T |
|
| Q |
418 |
aacaccacataaataata |
435 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
36018061 |
aacaccacacaaataata |
36018044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 102 - 378
Target Start/End: Complemental strand, 16484387 - 16484114
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||| ||| |
|
|
| T |
16484387 |
cccaccattgggtaataactcctaaaaatttgaagttcagtaccccaccattgggcattattctgaatcacctagtgcatatgaatcgccactacctcac |
16484288 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| |||||||||||||||||||||||| || ||||||||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
16484287 |
cgttgggtagtaactcctaaaactcggtgatcagtgccccaccattgggcatttgtctgagtcatctaatgcatgaatgtctccgtaaataccccaccg- |
16484189 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaa |
378 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
16484188 |
-gggtaatctc-ctaaaatcaaaagtctaatatcccatctttggatatagttttgaatcgccattttagttacttaa |
16484114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 18 - 309
Target Start/End: Original strand, 26262734 - 26263045
Alignment:
| Q |
18 |
taactaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtccca------------ |
105 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
26262734 |
taactaaaatgtgttagtccctaatggtcaatctatatgtacatgctcatgatccggatttcacctctaaacggagccaattgtcccaccattggacaat |
26262833 |
T |
|
| Q |
106 |
--------ccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactacc |
197 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | |
|
|
| T |
26262834 |
ataccccaccattgggtaataactcctaaaaattggatgttcagtaccccaccattgggcattattttgaatcatctaatgcatatgaatcgtcactatc |
26262933 |
T |
|
| Q |
198 |
ccaccattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaatacccca |
297 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
26262934 |
ccaccattgggtaataactcctaaaactcgatgttcagtaccccagcgttgggcatttgtctgagtcatctaatgcatgaatgtctcggtaaatacccca |
26263033 |
T |
|
| Q |
298 |
ccgttgggtaat |
309 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
26263034 |
ccattgggtaat |
26263045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 21267457 - 21267551
Alignment:
| Q |
18 |
taactaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21267457 |
taactaaaatgcgttagttcctaatggtcaatctacatgtgcatgctcatgatccggatttcacctctaaacggagccaattgtcccaccattgg |
21267551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 48186174 - 48186266
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48186174 |
actaaaatgcattagtccctaatggtcaatctatatgtgcatgctcatgatccggatttcacctctaaacggagccaattgtcccaccattgg |
48186266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 12528240 - 12528332
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12528240 |
actaaaatgcgttagtccctaatggtcaatctatttgtccatgctcatgatccggatttcacctctaaacggagccaattgtcccaccattgg |
12528332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 12502610 - 12502702
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12502610 |
actaaaatgcgttagcccctaatggtcaatctatttgtccatgctcatgatccggatttaacctctaaacggagccaattgtcccaccattgg |
12502702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 16422197 - 16422105
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||| |||||| |||||| |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16422197 |
actaaaatgcgttaattcctattggtcagtctatatgcaaatgctcatgatccagatttcacctctaaacggagccaaatgtcccaccattgg |
16422105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 28384601 - 28384509
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||| | |||| |||| | |||||||| ||||||||||| |||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
28384601 |
actaaaatgcgttaatccctattggttagtctatatgcaaatgctcatgatccggatttcacctctaaacggatccaaatgtcccaccattgg |
28384509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 28393534 - 28393442
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||| | |||| |||||| |||||||| |||||||||| | | | ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28393534 |
actaaaatgcgttaatccctattggtcagtctatatgcaaatgctcatgaatcgaaattcacctctaaacggagccaaatgtcccaccattgg |
28393442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 11282925 - 11283001
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaa |
97 |
Q |
| |
|
|||||| || |||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
11282925 |
actaaagtgtgttagtccctaatggtcagtctatatgca-atgctcatgatccggatttcacctctaaacggagccaa |
11283001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 16421983 - 16421904
Alignment:
| Q |
101 |
tcccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcat |
181 |
Q |
| |
|
||||||| ||||||| |||||||| |||| |||||| ||| | ||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
16421983 |
tcccaccgttgggtagtaactcct-aaaactcgatggtcagtgccccaccattggacatttgtctgagtcatctaatgcat |
16421904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 21267571 - 21267611
Alignment:
| Q |
112 |
ggtaataactcctaaaaattcgatgttcaataccccaccat |
152 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21267571 |
ggtaataactcctaaaaattcgatgttcagtaccccaccat |
21267611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 48186291 - 48186373
Alignment:
| Q |
194 |
taccccaccattgggtagtaactcct-aaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcat |
275 |
Q |
| |
|
||||||||||||||||| |||||||| |||| |||||| ||||| ||||| | ||| |||||| ||| | ||||||||||||| |
|
|
| T |
48186291 |
taccccaccattgggtaataactcctaaaaattcgatgttcagtaccccatcattgggcatttttctgaatcatctaatgcat |
48186373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 16484506 - 16484415
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||| | |||| |||| | |||||||| ||||||||||| | ||||| ||||||||||||||||| ||||||| |||||| |
|
|
| T |
16484506 |
actaaaatgcgttaatccctattggtgagtctatatgccaatgctcatgatccg-atttcgcctctaaacggagccaaatgtcccatcattgg |
16484415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 28393058 - 28393010
Alignment:
| Q |
420 |
caccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
||||||| ||| |||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
28393058 |
caccacaaaaagaatacacataatattcataccaaaacaacaacaccaa |
28393010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 16422080 - 16422019
Alignment:
| Q |
194 |
taccccaccattgggtagtaactcct-aaaactcgatggtcagtgccccaccgttgagcatt |
254 |
Q |
| |
|
||||||||||||||||| |||||||| |||| |||||| ||||| ||||||| ||| ||||| |
|
|
| T |
16422080 |
taccccaccattgggtaataactcctaaaaattcgatgttcagtaccccaccattgggcatt |
16422019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 20 - 468
Target Start/End: Complemental strand, 15426467 - 15426000
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattg-------- |
111 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
15426467 |
actaaaatgcgttagtccctaatggtcagtctatatgca-atgctcatgatccggatttcacctctaaacggagccaaatgtcccaccattgaacaatat |
15426369 |
T |
|
| Q |
112 |
------------ggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactacccc |
199 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
15426368 |
accccaccattgggtaataactcctaaaaattcggtgttcagtaccccaccattgggcattattctgaatcacctaatgcatatgaatcgccactacccc |
15426269 |
T |
|
| Q |
200 |
accattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccacc |
299 |
Q |
| |
|
||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| | |||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
15426268 |
accgttgggtagtaattcctaaaactcgatggtcagtgccccaccattgggcatttgtgtgagtcatctaatgcatgaaagtctctttaaataccccacc |
15426169 |
T |
|
| Q |
300 |
gttgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaa |
399 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
15426168 |
gttgggtaatctccaaaaaatcaaaagtctaatatcccacctttggatatagttttgaatcgccatttcagttacttaaggttattcacccataaacaaa |
15426069 |
T |
|
| Q |
400 |
aagtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
15426068 |
gattattttcattaaaacaacaccacataaataatacatataatattcatgccaaaacaacaccaccaa |
15426000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 102 - 468
Target Start/End: Complemental strand, 15419349 - 15418983
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
15419349 |
cccaccattgggtaataactcctaaaaattcggtgttcagtaccccaccattgggcattattctgaatcacctaatgcatatgaatcgccactaccccac |
15419250 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| |||||||||||||| ||||| |||||||||||||||||||| ||| |||||||| | |||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
15419249 |
cgttgggtagtaactcttaaaaatcgatggtcagtgccccaccattgggcatttgtgtgagtcatctaatgcatgaaagtctctttaaataccccaccgt |
15419150 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||||||| ||||||||||| | |
|
|
| T |
15419149 |
tgggtaatctccaaaaaatcaaaagtctaatatcccacctttggatatagttttgaatcgccatttcagttacttaaggttattcatccataaacaaaga |
15419050 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15419049 |
ttatttacattaaaacaacacaacataaataatacacataatattcatgccaaaacaacaccaccaa |
15418983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 20 - 468
Target Start/End: Original strand, 28653970 - 28654440
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccacc------------ |
107 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| |
|
|
| T |
28653970 |
actaaaatgcgttagtccctaatggtcaacctatatgtgcatgctcatgatccagatttcacctctaaacagagtcaattgtcccaccattggacaatat |
28654069 |
T |
|
| Q |
108 |
--------attgggtaat---aactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactac |
196 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
28654070 |
accccaccattgggtaataataactcctaaaaattcgatgttcagtaccccaccattggacattattttgaatcatctaatgtatatgaatcgtcactac |
28654169 |
T |
|
| Q |
197 |
cccaccattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaatacccc |
296 |
Q |
| |
|
|| ||||||||||| ||||||||||||||||||| ||||| || |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
28654170 |
cctaccattgggtaataactcctaaaactcgatgttcagtacctcaccgttggacatttgtctgagtcatctaatgcatgaatgtctccgtaaatacccc |
28654269 |
T |
|
| Q |
297 |
accgttgggtaatctct-aaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaa |
395 |
Q |
| |
|
||| ||||||||| || ||||| ||||||| ||||||| ||||||||| ||| ||||||||| ||||||||||||||||||| || ||||||| |
|
|
| T |
28654270 |
accattgggtaataactccttaaatc-taagtctagtatcccatcgttggatatagtttagaatcacca-tttagttacttaaggttatgcatccataaa |
28654367 |
T |
|
| Q |
396 |
caaaaagtatttacattaaaccaacaccacataaataat-acacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
|||| |||||||| ||||| |||||||||| ||||||| || || ||||||||| ||||| ||| |||||||| |
|
|
| T |
28654368 |
caaagagtatttaagttaaaacaacaccacacaaataataactcagaatattcattccaaagcaa-accaccaa |
28654440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 102 - 468
Target Start/End: Complemental strand, 52945270 - 52944900
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
|||||| |||| |||||||| |||||||||| |||||| || ||||||||||| ||||||||||||||| |||||||||||||||||| || ||||||| |
|
|
| T |
52945270 |
cccaccgttggataataacttctaaaaattcaatgttcggtatcccaccattggccattattctgaatcacctaatgcatatgaatcgttaccaccccac |
52945171 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagt-gccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccg |
300 |
Q |
| |
|
||||||| | |||||||||||| |||| ||||| ||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
52945170 |
tgttgggtaatgactcctaaaacttgatgttcagtacccccaccattgggcatttgtctgagtcatctaatgcatgaatatctccataaataccccacca |
52945071 |
T |
|
| Q |
301 |
ttgggtaatctct-aaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaa |
399 |
Q |
| |
|
||||||| | || || || ||||| |||||||| |||||||||| | |||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
52945070 |
ttgggtactaactcctcgcctctaaggtctagtatcccacctttggatatagtgttgaatcaccattttagttactcaagattattcacccataaacaaa |
52944971 |
T |
|
| Q |
400 |
aagtatttacattaaaccaacaccacataaataat-acacataata-ttcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
|||||||| ||||| |||||||||| |||||| |||||||||| ||||||| |||| || |||||||| |
|
|
| T |
52944970 |
tagtatttatgttaaaacaacaccacaagaataataacacataatatttcatgctaaaataaaaccaccaa |
52944900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 15419468 - 15419377
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
15419468 |
actaaaatgcgttagtccctaatggtcagtctatatgca-atgctcatgatccggatttcacctctaaacggagccaaatgtcccaccattgg |
15419377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 52945391 - 52945298
Alignment:
| Q |
18 |
taactaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||||| | |||| |||| | |||||||| ||||||||||| |||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
52945391 |
taactaaaatgcgttaat-cctattggtaagtctatatgccaatgctcatgatccggatttcacctctatgcggagccaaatgtcccaccattgg |
52945298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 102 - 468
Target Start/End: Complemental strand, 18902393 - 18902028
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||||||| |
|
|
| T |
18902393 |
cccaccattgggtaataactcctaaaaattcgatgttcagtaccccaccattgggcattattctgaatcacctaatgcatatgaattgccactaccccac |
18902294 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| || |||||||||||||||||||||||||| ||| ||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||| ||| ||| |
|
|
| T |
18902293 |
cgttcggtagtaactcctaaaactcgatggtaagtaccccaccattgggcatttgtctgagtcatctaatgcatgaatgtctccgtaaatactccatcgt |
18902194 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
18902193 |
tgggtaatctc-ctaaaatcaaaagtctaatataccacctttggatatagttttgaatcaccattttagttacttaaagttattcacccataaacaaata |
18902095 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
|||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
18902094 |
gtatttacattaaaacaaaaccacagaaataatacacataatattcatgcaaaaacaacaacaccaa |
18902028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 23 - 468
Target Start/End: Complemental strand, 18153923 - 18153459
Alignment:
| Q |
23 |
aaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg---------- |
112 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
18153923 |
aaaatgcgttagtccctaatggtcaatctatatgtgcatgctcatgatccggatttcacctctaaacgaagtcaattgtcccaccattggacaatatacc |
18153824 |
T |
|
| Q |
113 |
----------gtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccacc |
202 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
18153823 |
ccaccattgggtaataactcctaaaaattcgatgttcagtaccccaccattgggcattattctgaatcatctaatgcatatgaatcgtcattaccccacc |
18153724 |
T |
|
| Q |
203 |
attgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgtt |
302 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||||||| || |
|
|
| T |
18153723 |
attgggtaataactcctaaaactcgatgttcagtaccccaccgttgggcatttgtctgagtcatctaatgcatgattgtctccgtaaataccccaccatt |
18153624 |
T |
|
| Q |
303 |
gggtaatctct-aaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
||||||| || ||||| ||||||| |||||||| ||||||||| ||| ||||||||| ||||||||||||||||||| || ||||||||||| | |
|
|
| T |
18153623 |
gggtaataactccttaaatc-taagtctagtatcccaccattggatatagtttagaatcacca-tttagttacttaaggttatgcatccataaacaaaga |
18153526 |
T |
|
| Q |
402 |
gtatttacattaaaccaacaccacataaataat-acacataatattcatgccaaaacaacaccaccaa |
468 |
Q |
| |
|
||||||| ||||| ||||||||| ||||||| ||||||||||||||| ||||| ||| |||||||| |
|
|
| T |
18153525 |
gtatttatgttaaaacaacaccactcaaataataacacataatattcataccaaagcaa-accaccaa |
18153459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 18902497 - 18902405
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||| | |||| |||||| |||||||| |||| |||||| ||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
18902497 |
actaaaatgcgttaatccctattggtcagtctatatgccaatgcacatgatccggatttcacctctaaacagagccaaatgtcccaccattgg |
18902405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 18902396 - 18902314
Alignment:
| Q |
194 |
taccccaccattgggtagtaactcct-aaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcat |
275 |
Q |
| |
|
||||||||||||||||| |||||||| |||| |||||| ||||| ||||||| ||| ||||| ||| | ||| ||||||||| |
|
|
| T |
18902396 |
taccccaccattgggtaataactcctaaaaattcgatgttcagtaccccaccattgggcattattctgaatcacctaatgcat |
18902314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0172 (Bit Score: 206; Significance: 1e-112; HSPs: 2)
Name: scaffold0172
Description:
Target: scaffold0172; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 102 - 469
Target Start/End: Original strand, 34288 - 34654
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| || |
|
|
| T |
34288 |
cccaccattggataataactcctaaaaattcgatgttcagtatcccaccattgggcattattctgaatcacctaatgcatatgaatcgccactacccgac |
34387 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||| ||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
34388 |
cgttgggtagtaactcctaaaactcgatggtcagtgccccatcattgcgcatttgtctgagtcatctaatgcatgaatgtctccttaaataccccaccgt |
34487 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaa- |
400 |
Q |
| |
|
||| ||||||| |||| |||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||| |||||||||||||||| |||| |
|
|
| T |
34488 |
tggataatctccttaaaaacaaaagtctagtatcccacctttggatatagttttgaatcaccattatagttactt---gttattcacccataaaaaaaaa |
34584 |
T |
|
| Q |
401 |
-agtatttacattaaaccaacaccacataaataat-acacataatattcatgccaaaacaacaccaccaaa |
469 |
Q |
| |
|
|||||| | ||||| |||||| ||| |||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
34585 |
tagtattcatgttaaaacaacacaaca-caataataacacatgatattcatgccaaaacaacaccaccaaa |
34654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0172; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 34168 - 34260
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||| ||| || |||||| ||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34168 |
actaaaatgcgttaattcttattggtcagtctatatgtaaatgctcatgatccggatttcacctctaaacggagccaaatgtcccaccattgg |
34260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 105 - 469
Target Start/End: Original strand, 29962702 - 29963060
Alignment:
| Q |
105 |
accattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccaccat |
204 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||| | |
|
|
| T |
29962702 |
accattggataataactcctaaaaattcgatgttcagtaccccaccattgggcattattctgaatcacctaatgcatatgaatcgccactaccccaccgt |
29962801 |
T |
|
| Q |
205 |
tgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgttgg |
304 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||| ||| ||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
29962802 |
tgggtagtaactcctaaaattcaatggtcagtgccctaccattgggcatttgtctgagtcatctaatgcatgaatgtctccttaaataccccaccgttgg |
29962901 |
T |
|
| Q |
305 |
gtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaa--ag |
402 |
Q |
| |
|
|||||||| | |||| |||||||||| |||||||| |||||||||| ||||||||||||||| |||||| || |||||||| ||||||| |||| || |
|
|
| T |
29962902 |
gtaatctc-ataaaaacaaaagtctagtatcccacctttggatatagttttgaatcaccattatagttaatt---gttattca-ccataaaaaaaaatag |
29962996 |
T |
|
| Q |
403 |
tatttacattaaaccaacaccacataaataatacacataatattcatgccaaaacaacaccaccaaa |
469 |
Q |
| |
|
|||| | ||||| ||||| |||| |||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
29962997 |
tattcatgttaaaacaacatcaca-caata--acacatgatattcatgccaaaacaacaccaccaaa |
29963060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 102 - 469
Target Start/End: Complemental strand, 2039430 - 2039068
Alignment:
| Q |
102 |
cccaccattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccac |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
2039430 |
cccaccattgggtaataactcctaaaaattcgatgttcagtaccccaccatttggcattattctgaatcacctaatgcatatgaatcgccactaccccac |
2039331 |
T |
|
| Q |
202 |
cattgggtagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgt |
301 |
Q |
| |
|
| ||||||||||||||||||||||| || ||||||| |||||| ||| |||||||||| ||||| ||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
2039330 |
cgttgggtagtaactcctaaaactcaatagtcagtgtcccaccattgggcatttgtctgagtcaactaatgcatgaatgtctccttaaataccccaccgt |
2039231 |
T |
|
| Q |
302 |
tgggtaatctctaaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaa- |
400 |
Q |
| |
|
||||||||||| |||| | || |||| |||||||| |||||||||| ||||||||||||||| ||||||||| |||||||||||||||| |||| |
|
|
| T |
2039230 |
tgggtaatctcctaaaatt---aaatctagtatcccacctttggatatagttttgaatcaccattatagttactt---gttattcacccataaaaaaaat |
2039137 |
T |
|
| Q |
401 |
agtatttacattaaaccaacaccacataaataat-acacataatattcatgccaaaacaacaccaccaaa |
469 |
Q |
| |
|
|||||| | ||||| | ||||||| |||||| |||||| ||||||||| |||||||||||||||||| |
|
|
| T |
2039136 |
agtattcatgttaaaagagcaccaca-caataataacacatgatattcatgtcaaaacaacaccaccaaa |
2039068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 2039548 - 2039458
Alignment:
| Q |
22 |
taaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||| |||||| || ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
2039548 |
taaaatgcgttaattcctattgttcagtctatatgcaaatgctcatgatccggatttcacctctaaacggagtcaaatgtcccaccattgg |
2039458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 29962597 - 29962674
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaa |
97 |
Q |
| |
|
||||||| |||||| |||||| |||||| |||||||| ||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
29962597 |
actaaaacgcgttaattcctattggtcagtctatatgcaaatgttcatgatccggatttcacctctaaacggagccaa |
29962674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0655 (Bit Score: 135; Significance: 4e-70; HSPs: 3)
Name: scaffold0655
Description:
Target: scaffold0655; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 109 - 401
Target Start/End: Complemental strand, 7971 - 7681
Alignment:
| Q |
109 |
ttgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcatatgaatcgtcactaccccaccattggg |
208 |
Q |
| |
|
|||||||||||||| ||||| || |||||||| ||||| ||| |||| |||||||||||| || |||||| | |||||| |||||||||| | ||||||| |
|
|
| T |
7971 |
ttgggtaataactcttaaaattt-gatgttcagtaccctaccgttgggcattattctgaaacacctaatgaaaatgaattgtcactaccctagcattggg |
7873 |
T |
|
| Q |
209 |
tagtaactcctaaaactcgatggtcagtgccccaccgttgagcatttgtctaagtcatctaatgcatgaatatctccgtaaataccccaccgttgggtaa |
308 |
Q |
| |
|
|| ||||||||||||||||||| ||||| ||||||| ||| |||||||| | ||||||||||||||||| ||||||| ||||||||||||| ||| ||| |
|
|
| T |
7872 |
taataactcctaaaactcgatgttcagtaccccaccattgggcatttgtttgagtcatctaatgcatgactatctccataaataccccaccattgactaa |
7773 |
T |
|
| Q |
309 |
tctc-taaaaaatcaaaagtctaatatcccacatttggatataattttgaatcaccattttagttacttaaggttattcacccataaacaaaaa |
401 |
Q |
| |
|
|||| | ||| || ||| |||| |||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7772 |
tctcgtcaaatat--aaaatctagtatcccaccttttgatatagttttgaatcaccattttagttacttaaggttattcacccataaaaaaaaa |
7681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0655; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 7879 - 7806
Alignment:
| Q |
107 |
cattgggtaataactcctaaaaattcgatgttcaataccccaccattggacattattctgaatcatctaatgcat |
181 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||| |||||||||||||| |||| | ||| ||||||||||||| |
|
|
| T |
7879 |
cattgggtaataactcct-aaaactcgatgttcagtaccccaccattgggcatttgtttgagtcatctaatgcat |
7806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0655; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 8098 - 8006
Alignment:
| Q |
20 |
actaaaatgcgttagttcctaatggtcaatctatatgtgcatgctcatgatttggatttcacctctaaacggagccaattgtcccaccattgg |
112 |
Q |
| |
|
|||||||||||||| | |||| |||| | | |||||| ||||||||||| |||||||||||||| ||||||||| ||||| |||||||| |
|
|
| T |
8098 |
actaaaatgcgttaatccctattggttagtttatatgcaaatgctcatgatccggatttcacctctatgcggagccaaatgtccgaccattgg |
8006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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