View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9695_11 (Length: 350)
Name: NF9695_11
Description: NF9695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9695_11 |
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Alignment Details
Target: chr5 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 6559736 - 6559406
Alignment:
| Q |
1 |
atcacttaaaagactacaataccaacagatatacatatttaaacatgaacaagcatatggataaacaccgaggaacatacatgaccatttcctcacaaac |
100 |
Q |
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| T |
6559736 |
atcacttaaaagactacaataccaacagatatacatatttaaacatgaacaagcatatggataaacaccgaggaacgtacatgaccgtttcctcacaaac |
6559637 |
T |
|
| Q |
101 |
atccttggcggaagaaacaagtgagtaaaacttgttgaagtcgaggggtgagaaagaacaagagacgaccaaaaatgaaaaataggtctcaacaagaaaa |
200 |
Q |
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| T |
6559636 |
atccttggcggaagaaacaagtgagtaaaacttgttgaagtcgaggggtgagaaagaacaagagatgaccaaaaatgaaaaagaggtctcaacaagaaaa |
6559537 |
T |
|
| Q |
201 |
aagaagacgactttggcgataggaacaagggttttttcgcaatagagttgagaaatatagcaaattgtctaactatccggcttaaaacatacgttttcaa |
300 |
Q |
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| T |
6559536 |
aagaagacgactttggcgataggaataagggttttttcgcaatagagttgagaaatatagcaaattgtctaactatccggcttaaaacatacgttttcaa |
6559437 |
T |
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| Q |
301 |
cctttttgaatcatttgaagtcggttttgta |
331 |
Q |
| |
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|||||||| | |||||||||||||||||||| |
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| T |
6559436 |
cctttttgcaccatttgaagtcggttttgta |
6559406 |
T |
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