View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9696_1D_low_11 (Length: 398)
Name: NF9696_1D_low_11
Description: NF9696_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9696_1D_low_11 |
 | |
|
| [»] chr3 (6 HSPs) |
| |
|
| [»] chr8 (4 HSPs) |
| |
|
| [»] scaffold0479 (1 HSPs) |
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| [»] chr7 (14 HSPs) |
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| [»] scaffold0003 (1 HSPs) |
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| [»] chr4 (7 HSPs) |
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| [»] scaffold0045 (2 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 344; Significance: 0; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 4 - 398
Target Start/End: Original strand, 54980013 - 54980408
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
54980013 |
aatgataatgggaatacaacaacttcacccttaggtggatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctcgctatttc |
54980112 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
54980113 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggttctctttctctcttgctctttgttgttcttctcttatggtgtgttgtgaatg |
54980212 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtccct |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
54980213 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacacttgtcatttgcctttcatgcaaaacaccaagtgtccct |
54980312 |
T |
|
| Q |
303 |
tgcaatgcatgcaccacaccaagtgtcccttatgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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|
| T |
54980313 |
tgcaatgcatgcaccacaccaagtgtctctcatgcattacaccatgtgttactcatacactacaccatgtgtacaccatgcatcctgctacttgtc |
54980408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 4 - 395
Target Start/End: Original strand, 54967381 - 54967773
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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|
| T |
54967381 |
aatgataatgggaatacaacaacttcacccttaggtggatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctcactatttc |
54967480 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
54967481 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggttctctttctctcttgctctttgttgttcttctcttatggtgtgttgtgaatg |
54967580 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtccct |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
54967581 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacacttgtcatttgcctttcatgcaaaacaccaagtgtccct |
54967680 |
T |
|
| Q |
303 |
tgcaatgcatgcaccacaccaagtgtcccttatgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctactt |
395 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
54967681 |
tgcaatgcatgcaccacaccaagtgtctctcatgcattacaccatgtgttactcatacactacaccatgtgtacaccatgcatcctgctactt |
54967773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 4 - 398
Target Start/End: Original strand, 44782695 - 44783088
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
44782695 |
aatgataatgggaatacaacaacttcacccttaggtggatctcactacaatatatctctcaatttgcaaggaacactctcacaaattggctcactatttc |
44782794 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
44782795 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctctttctc--ttgctctttgttgttcttctcttgtggtgtgttttgaatg |
44782892 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtccct |
302 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
44782893 |
cttgctcatggtcctatttataggagaagcaagccaaagttgccttacatgcatgaagacatttgtcatttgccttttatgcaaaacaccaagtgtccct |
44782992 |
T |
|
| Q |
303 |
tgcaatgcatgcaccacaccaagtgtcccttatgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
|||||||||||||||||||||| |||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44782993 |
tgcaatgcatgcaccacaccaaatgtctctcatgcattacaccatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
44783088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 4 - 384
Target Start/End: Complemental strand, 39298831 - 39298442
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
39298831 |
aatgataaagggaatacaacaacttcacccttaggtggatctaactacaatatatctctcaatttgtaagga-cactctcacaaattggctcactatttc |
39298733 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctc--ttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaa |
201 |
Q |
| |
|
|||||||| ||||||| |||||||| ||||||||| ||||||||| |||| ||||||| ||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
39298732 |
tctcacaaaggaactctccatgaggatcacttttctcatttgagcaagactctctttctctcttgctttttgttgttcttatcttgtggtgtgttgtgaa |
39298633 |
T |
|
| Q |
202 |
tgcttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtcc |
300 |
Q |
| |
|
||||| ||||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
39298632 |
tgcttactcatggttctatttataggagaagcaagccaaagttcatttacatgcatgaagacacttgtcatttgcttttcatgcaaaacaccaagtgtcc |
39298533 |
T |
|
| Q |
301 |
cttgcaatgcatgcaccacaccaagtgtccctt-------atgcattacatcatgtgttactcatacactacaccatgtgtacaccatgca |
384 |
Q |
| |
|
||||||| |||||| ||||||| ||||| ||| |||||| ||| ||| |||||||| |||||||||| |||||||||||||||| |
|
|
| T |
39298532 |
cttgcaaaacatgcatcacaccatgtgtctcttgcaatgcatgcatcacaacatatgttactcgtacactacactatgtgtacaccatgca |
39298442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 397
Target Start/End: Complemental strand, 17645797 - 17645431
Alignment:
| Q |
30 |
acccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttctctcacaagaaaactctctatgagga |
129 |
Q |
| |
|
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||| |||||| | |
|
|
| T |
17645797 |
acccctaggtggatctcactacaacgtatctctcaatttgtaaggaacactcttacaaattggctcactatttatctcacaaggaaactctttatgagaa |
17645698 |
T |
|
| Q |
130 |
tgacttt--tctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatgcttgatcatggtcctatttatagg |
227 |
Q |
| |
|
| ||||| ||| |||| |||| ||| || ||| ||| | ||||||||||| ||| ||||||||||||||||| || | ||||| || |
|
|
| T |
17645697 |
tcactttcctcttttgattaagggtcttcttttctcttgttttttgttgttctactcctgtggtgtgttgtgaattctagctcatgctc----------- |
17645609 |
T |
|
| Q |
228 |
aggagcaagccaaag-ttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtcccttgcaatgcatgcaccacaccaag |
325 |
Q |
| |
|
| | |||||||||| |||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||| | |
|
|
| T |
17645608 |
-gaatcaagccaaagtttgccttacatgcatgaacacacttgtcatttgcctttcatgcaaaacaccaagtgtcccttccaatgaatgcaccgcaccatg |
17645510 |
T |
|
| Q |
326 |
tgtccctt-------atgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgt |
397 |
Q |
| |
|
|||| ||| ||||| ||| ||| ||||||||||||||||||| | | |||||||| || | |||||||||| |
|
|
| T |
17645509 |
tgtctcttgcaatgcatgcaccacaacatatgttactcatacactacacaaactatacaccatacaccctgctacttgt |
17645431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 18556473 - 18556523
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaat |
54 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
18556473 |
aatgacaatgagaatacaacaacttcacccttaggtggatctcattacaat |
18556523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 336; Significance: 0; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 4 - 398
Target Start/End: Complemental strand, 36167643 - 36167251
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36167643 |
aatgataatgggaatacaacaacttcacccttaggtggatctcactataatatatctctcaatttgtaaggaacactctcacaaattggctcactatttc |
36167544 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36167543 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctctttctct--tgctctttgttgttcttctcttgtggtgtgttgtgaatg |
36167446 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgcaaacaccaagtgtccctt |
303 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
36167445 |
cttgctcatggtcctatttataggagaagcaagccaaagttgccttacatgcatgaagacatttgttattttcctttcatgcaaacaccaagtgtccctt |
36167346 |
T |
|
| Q |
304 |
gcaatgcatgcaccacaccaagtgtcccttatgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
||| |||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36167345 |
gcattgcatgcaccacaccaagtgtctctcatgcattacaacatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
36167251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 4 - 398
Target Start/End: Complemental strand, 41481644 - 41481252
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
41481644 |
aatgataatgggaatacaacaacttcacccttaggtggatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctcactatttc |
41481545 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
41481544 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctctttctct--tgctctttgttgttcttctcttgtggtgtgttatgaatg |
41481447 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgcaaacaccaagtgtccctt |
303 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| || |
|
|
| T |
41481446 |
cttgctcatggtcctatttataggagaagcaagccaaagttgccttacatgcatgaagacatttgtaatttacctttcatgcaaacaccaagtgtccatt |
41481347 |
T |
|
| Q |
304 |
gcaatgcatgcaccacaccaagtgtcccttatgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41481346 |
gcaatgcatgcaccacaccaagtgtctctcatgcattacaacatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
41481252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 4 - 395
Target Start/End: Original strand, 18951291 - 18951685
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
18951291 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactataatttatctctcaatttgtaaggaacactctcacaaattggctcattatttc |
18951390 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||| | |||| |||| ||||||| ||| | |||||||||||||||||||||| ||| ||||||| |
|
|
| T |
18951391 |
cctcaagagaaaactctctacgaggatgacttttctcttaaacaagactctttttctctcttgatttttgttgttcttctcttgtggtttgtcgtgaatg |
18951490 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgcaaa-caccaagtgtccct |
302 |
Q |
| |
|
|||| | |||||| |||||||||||| | |||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||| |||||| ||||||| |
|
|
| T |
18951491 |
cttgcttatggtcttatttataggagaaacaagccaaagctgccttacatgcatgagaacacttgtcattttcctttcatgcaaatcaccaattgtccct |
18951590 |
T |
|
| Q |
303 |
tgcaatgcatgcaccacaccaagtgtccctt--atgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctactt |
395 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18951591 |
tgcaatgcatgcaccacaccaagtgtcccttacatgcaccacaacatgtgtcactcatacactacaccatgtgtacaccatgcatcttgctactt |
18951685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 209 - 398
Target Start/End: Complemental strand, 18966078 - 18965886
Alignment:
| Q |
209 |
tcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgcaaa-caccaagtgtcccttgcaa |
307 |
Q |
| |
|
|||||||| |||||||||||| || ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| |
|
|
| T |
18966078 |
tcatggtcttatttataggagaaggaagccaaagctgccttacatgcatgaagacatttgtcattttcctttcatgcaaatcaccaactgtcccttgcaa |
18965979 |
T |
|
| Q |
308 |
tgcatgcaccacaccaagtgtccctt--atgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18965978 |
tgcatgcaccacaccaagtgtcccttgcatgcaccaaaacatgtgtcactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
18965886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0479 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: scaffold0479
Description:
Target: scaffold0479; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 4 - 398
Target Start/End: Complemental strand, 2765 - 2371
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
2765 |
aatgataatgggaatacaacaacttcacccttaggtggatctcactacaatatatctctcaatttgtaaggaacgctctcacaaattggctcactatttc |
2666 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2665 |
tctcacaagaaaactctctatgaggatgacttt-ctcatgagcaaggctctctttttctcttgctctttgttgttcttctcttgtggtgtgttttgaatg |
2567 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgcaa-acaccaagtgtccct |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2566 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacacttgtcatttgcctttcatgcaagacaccaagtgtccct |
2467 |
T |
|
| Q |
303 |
tgcaatgcatgcaccacaccaagtgtcccttatgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2466 |
tgcaatgcatgcaccacaccaagtgtctctcatgcattacaccatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
2371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 309; Significance: 1e-174; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 4 - 398
Target Start/End: Original strand, 25857299 - 25857699
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
25857299 |
aatgataatgggaatacaacaacttcacctttaggtggatctcactacaatatatctcttaatttgtaaggaacactctcacaaattggctcactatttc |
25857398 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
25857399 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctctttctctcttgctctttgttgttcttctattgtggtgtgttgtgaatg |
25857498 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgcaaacaccaagtgtccctt |
303 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25857499 |
cttgctcatggtcctatttataggagaagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgcaaacaccaagtgtccctt |
25857598 |
T |
|
| Q |
304 |
gcaatgcat----gcaccacaccaagtgtccctt--atgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgt |
397 |
Q |
| |
|
||||||||| |||||||||||| |||||||| ||||| ||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25857599 |
gcaatgcatgcacgcaccacaccaaatgtcccttgcatgcaccacaacacatgtcactcatacactacaccatgtgtacaccatgcatcttgctacttgt |
25857698 |
T |
|
| Q |
398 |
c |
398 |
Q |
| |
|
| |
|
|
| T |
25857699 |
c |
25857699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 4 - 395
Target Start/End: Original strand, 4842819 - 4843212
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
4842819 |
aatgataataggaatacaacaacttcacccttaggtggatctcactacaatatatctctcaatttttaaggaacactctcacaaattggctcaatatttc |
4842918 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctc-tttgttgttcttctcttgtggtgtgttgtgaat |
202 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||||||| ||||| |
|
|
| T |
4842919 |
tctcacaagaaaactctttatgaggatgacttttctcttgagcaaggctctctttctctcttgctcttttgttgttcttttcttgtggtgtgttttgaat |
4843018 |
T |
|
| Q |
203 |
gcttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtccc |
301 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4843019 |
gcttgttcatggtcctatttataggagaagcaagtcaaagttgccttacatgcatgaagacacttgtcatttgcctttcatgcaaaacaccaagtgtccc |
4843118 |
T |
|
| Q |
302 |
ttgcaatgcatgcaccacaccaagtgtcccttatgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctactt |
395 |
Q |
| |
|
|||| ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
4843119 |
ttgctatgcatgcaccacaccaagtgtctctcatgcattacaccatgtgttactcatacactacaccatgtgtacacaatgcaccttgctactt |
4843212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 4 - 299
Target Start/End: Original strand, 4835744 - 4836041
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4835744 |
aatgataatgggaatgcaacaacttcacccttaggtggatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctcactatttc |
4835843 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctc-tttgttgttcttctcttgtggtgtgttgtgaat |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4835844 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctctttctctcttgctcttttgttgttcttctcttgtggtgtgttgtgaat |
4835943 |
T |
|
| Q |
203 |
gcttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtc |
299 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
4835944 |
gcttgctcatggtcctatttataggagaagcaagccaaagttgccttacatgcatgaagacacttgtcatttgcctttcatgcaaaacaccaagtgtc |
4836041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 4 - 374
Target Start/End: Complemental strand, 4603704 - 4603333
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4603704 |
aatgataatggaaatacaacaactttacccttaggtggatctcactacaatatatctttcaatttgtaaggaacactt--acaaattggctctctatttc |
4603607 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
||||||||||||||||| ||||| ||| |||||||||||||||||| |||| ||||| | ||||| || ||||||||| ||||||||||||||||||||| |
|
|
| T |
4603606 |
tctcacaagaaaactctttatgaagataacttttctcttgagcaagactctctttctatcttgcttttcgttgttcttatcttgtggtgtgttgtgaatg |
4603507 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgca-aacaccaagtgtccct |
302 |
Q |
| |
|
|||| ||||| ||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4603506 |
cttgttcatgatcctatttataggagaagcaaaccaaagtttccttacatgcacgaagacatttgtcatttgcctttcatgcacaacaccaagtgtccct |
4603407 |
T |
|
| Q |
303 |
tgcaatgcatgcaccacaccaagtgtccctt--atgcattacatcatgtgttactcatacactacaccatgtgt |
374 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
4603406 |
tgcaatgcatgcacaacaccaagtgtcccttgcatgcaccaacacatgtgtcactcatacactacaccatgtgt |
4603333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 24379449 - 24379829
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
24379449 |
aatgataataggaatacaacaacttcacccttaggtggatctccctacaatatatctctcaatttgtaaggaacactctcataaattggctcactatttc |
24379548 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24379549 |
tttcacaagaaaactctctatgaggatgacttttctctcgagcaagactctcttt--------ctctttgttgttcttctcttgtggtgtgttgtgaatg |
24379640 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtccct |
302 |
Q |
| |
|
|||| |||||||||||||||||| | || ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
24379641 |
cttgctcatggtcctatttatagccgaaggaagccaaagttgccttacatgcatgaaga-------catttgccttt-atgcaaaacaccaagtgtccct |
24379732 |
T |
|
| Q |
303 |
tgcaatgcatgcaccacaccaagtgtccctt--atgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgt |
397 |
Q |
| |
|
||||||||||||||||||| ||||||| ||| ||||| ||| ||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
24379733 |
tgcaatgcatgcaccacacaaagtgtctcttgcatgcaccacaacatatgtcactcatacactacaccatgtgtacaccatgcatcttgctgcttgt |
24379829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 32 - 384
Target Start/End: Original strand, 38994237 - 38994598
Alignment:
| Q |
32 |
ccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttctctcacaag-aaaactctctatgaggat |
130 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
38994237 |
ccttaggtggatctcactacaatatatctctcaatttgtaaggaacactatcacaaattggctcattatttctctcacaaggaaaactctctatgaggat |
38994336 |
T |
|
| Q |
131 |
gacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatgcttgatcatggtcctatttataggagg |
230 |
Q |
| |
|
|||||||| |||||||| ||| ||||||| ||| | ||||||||||||||||||||||||||||||| | |||| |||||||| |||||||||||| |
|
|
| T |
38994337 |
tacttttcttttgagcaaaactccctttctctcttgttttttgttgttcttctcttgtggtgtgttgtgattacttgctcatggtcatatttataggaga |
38994436 |
T |
|
| Q |
231 |
agcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtcccttgcaatgcatgcaccacaccaagtgtc |
329 |
Q |
| |
|
||||||||||||||| ||||| |||||||||| | ||||||||||| |||||||| ||||| |||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
38994437 |
agcaagccaaagttgtcttacgtgcatgaagaaacttgtcatttgcatttcatgcaaaacatcaagtgtcccatgcaatgcatgcaccacaccatgtgtc |
38994536 |
T |
|
| Q |
330 |
cct-------tatgcattacatcatgtgttactcatacactacaccatgtgtacaccatgca |
384 |
Q |
| |
|
| |||||| ||| |||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
38994537 |
ttttgtaatatatgcaccacaacatgtgttactcatacactacatcatgtgtacactatgca |
38994598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 3 - 398
Target Start/End: Original strand, 27341101 - 27341501
Alignment:
| Q |
3 |
caatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctattt |
102 |
Q |
| |
|
|||||||||||| ||||||| |||||| | |||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
27341101 |
caatgataatggaaatacaataacttctc--ttagatggatctcactacaatatatctctcaatttgtaaggaacactctcacaggttggctcactattt |
27341198 |
T |
|
| Q |
103 |
ctctcacaagaaaactctctatgaggatgacttttctc--ttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtga |
200 |
Q |
| |
|
||||||||| ||||||| ||||||||| ||||||||| ||||||| | |||| ||||||| ||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
27341199 |
ctctcacaaagaaactctatatgaggataacttttctcttttgagcatgactctctttctctcttgct-tttgttgttcttct-ttgtggtgtgttgtga |
27341296 |
T |
|
| Q |
201 |
atgcttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtc |
299 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||||||| | |
|
|
| T |
27341297 |
atgcttgcccatggtcccatttataggagaagcaagtcaaagttgccttacatgcatgaagacacttgccattttcctttcaagcaaaacaccaagtgcc |
27341396 |
T |
|
| Q |
300 |
ccttgcaatgcatgcaccacaccaagtgtccctt-------atgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgcta |
392 |
Q |
| |
|
||||| |||||||||||||||||| ||||| ||| ||||| ||| |||| || ||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
27341397 |
ccttgtaatgcatgcaccacaccatgtgtctcttgcaatgcatgcaccacaacatg-gtaactcatatactacaccatgtgtacaccatgccccttgcta |
27341495 |
T |
|
| Q |
393 |
cttgtc |
398 |
Q |
| |
|
|||||| |
|
|
| T |
27341496 |
cttgtc |
27341501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 180 - 398
Target Start/End: Complemental strand, 17845726 - 17845504
Alignment:
| Q |
180 |
ttctcttgtggtgtgttgtgaatgcttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctt |
279 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||| |||||| |||| |||||||||| |||||||||| |||||||||||||| |
|
|
| T |
17845726 |
ttctcttgtggtgtgttatgaatgcttgtccatggtcctatttataggacaagcaagttaaagatgccttacatacatgaagacacttgtcatttgcctt |
17845627 |
T |
|
| Q |
280 |
tcatgc-aaacaccaagtgtcccttgcaatgcatgcaccacaccaagtgtccctt---atgcattacatcatgtgttactcatacactacaccatgtgta |
375 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||||| |||| ||| | ||| |||| |||||||||||||||||| | |||||||||| |
|
|
| T |
17845626 |
tcatgcaaaacaccaaatgtcccttgcaatgcatgcaccacaccacatgtctcttgcaaagcactacaacatgtgttactcatacaccataccatgtgta |
17845527 |
T |
|
| Q |
376 |
caccatgcatcttgctacttgtc |
398 |
Q |
| |
|
||||||||| ||| |||||||| |
|
|
| T |
17845526 |
caccatgcaccttattacttgtc |
17845504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 13465127 - 13465264
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||| || ||||| |
|
|
| T |
13465127 |
aatgataatgggaatacaacaagttcaccctcaggtggatctcactacaatgtatctctcaatttgtaaggaacactcttacaaattggttcactatt-- |
13465224 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttg |
143 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
13465225 |
tctcacaagaaaacattctatgaggatcacttttctcttg |
13465264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 381
Target Start/End: Original strand, 13465994 - 13466181
Alignment:
| Q |
202 |
tgcttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtcc |
300 |
Q |
| |
|
|||||| ||||||||||||||||||||| | |||||||||||| |||||||||||||||||| |||||||||| ||||||||| |||||| ||||||| |
|
|
| T |
13465994 |
tgcttgctcatggtcctatttataggagaaacaagccaaagttatcttacatgcatgaagacacttgtcatttgtctttcatgcaaaacacttagtgtcc |
13466093 |
T |
|
| Q |
301 |
cttgcaatgcatgcaccacaccaagtgtccctt---atg----cattacatcatgtgttactcatacactacaccatgtgtacaccat |
381 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
13466094 |
cttgcaatgcatgcaccacaccatgtgtcacttgcaatgcgtacaccacaacatgtgttactcatacattacaccatatgtacaccat |
13466181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 17845883 - 17845727
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctca----caaattggctctcta |
99 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| || |
|
|
| T |
17845883 |
aatgataatggaaatacaacaacttcacccttaggtgaatctcactacaatatatctctcaatttgtaaggaacactctcataattaaattgactcaata |
17845784 |
T |
|
| Q |
100 |
tttctctcacaagaaaactctctatgaggatgacttttctc--ttgagcaaggctct |
154 |
Q |
| |
|
||||||||||||| ||||||| ||| ||||| ||||||||| |||||||||||||| |
|
|
| T |
17845783 |
tttctctcacaaggaaactctttattaggatcacttttctcttttgagcaaggctct |
17845727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 4836030 - 4836110
Alignment:
| Q |
318 |
acaccaagtgtcccttatgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
|||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4836030 |
acaccaagtgtctctcatgcattacaccatgtgttactcatacactacaccatgtgtacaccatgcaccttgctacttgtc |
4836110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 13465268 - 13465305
Alignment:
| Q |
170 |
tttgttgttcttctcttgtggtgtgttgtgaatgcttg |
207 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13465268 |
tttgttgttcttctcttgtgttgtgttgtgaatgcttg |
13465305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 38994605 - 38994658
Alignment:
| Q |
345 |
catgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||| ||||||||||||| |
|
|
| T |
38994605 |
catgtgttactcatacactacttcatgtgtacttcatgcaccttgctacttgtc |
38994658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 4 - 398
Target Start/End: Original strand, 342386 - 342786
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
342386 |
aatgataatgggaatacaacaatttcacccttaggtgtatctgactacaatatatctctcaatttgtaaggaacactctcacaaattggctcactatttc |
342485 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
342486 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctctttctctcttgctctttgttgttcttctcttgtggtgtgttgtgaatg |
342585 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgcaaacaccaagtgtccctt |
303 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
342586 |
cttgctcatggtcctatttataggagaagcaagccaaagttgacttacatgcatgaagacatttgtcatttgcctttcatgcaaacaccaagtgtccctt |
342685 |
T |
|
| Q |
304 |
gcaatgcat----gcaccacaccaagtgtccctt--atgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgt |
397 |
Q |
| |
|
||||||||| |||||||||||| |||||||| ||||| ||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
342686 |
gcaatgcatgcacgcaccacaccaaatgtcccttgcatgcaccacaacaaatgtcactcatacactacaccatgtgtacaccatgcatcttgctacttgt |
342785 |
T |
|
| Q |
398 |
c |
398 |
Q |
| |
|
| |
|
|
| T |
342786 |
c |
342786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 4 - 398
Target Start/End: Original strand, 42683002 - 42683403
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
42683002 |
aatgataatgggaatacaacaacttcacccttaggtgcatctcactacaatatatctctcaatttgtaaggaacactcttacaaattggctcactatttc |
42683101 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
||||||||||||||||| | ||||||||| |||||||||||||||| |||| | ||||| ||||| |||||||||||| || |||||||||||||||||| |
|
|
| T |
42683102 |
tctcacaagaaaactctttgtgaggatgagttttctcttgagcaagactctctctctctcttgctttttgttgttcttatcctgtggtgtgttgtgaatg |
42683201 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtccct |
302 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| |||||||| |||||||||||||||||| |||||||||| ||||||| | |||||| |||||| ||| |
|
|
| T |
42683202 |
cttgctcatggtcctatttataggagaagcaagtcaaagttgtcttacatgcatgaagacacttgtcatttgtctttcatacaaaacacgaagtgt-cct |
42683300 |
T |
|
| Q |
303 |
tgcaatgcatgcaccacaccaagtgtccct-------tatgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctactt |
395 |
Q |
| |
|
||||||||||||| ||||||| | ||| || |||||| | ||||||||||||||| |||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
42683301 |
tgcaatgcatgcaacacaccacgcgtctcttgtaatgtatgcaccatgacatgtgttactcatatactacatcatgtgtacaccatgcaccttgttactt |
42683400 |
T |
|
| Q |
396 |
gtc |
398 |
Q |
| |
|
||| |
|
|
| T |
42683401 |
gtc |
42683403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 4 - 333
Target Start/End: Original strand, 9757384 - 9757703
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9757384 |
aatgataatgggaatacaacaacttcacccttaggtggatctcactataatatatctctcaatttgtaaggaacactctcacaaattggctcactatttc |
9757483 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| |||| |||||||||||||||| || |||||| |
|
|
| T |
9757484 |
tctcaaaagaaaactctctatgaagatgacttctctcttgagcaaggctctctttctctcttgc----------tcttctcttgtggtgt-ttttgaatg |
9757572 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtccct |
302 |
Q |
| |
|
|||| ||||||||||||||||| ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9757573 |
cttgctcatggtcctatttataagagaagccagccaaagttgcctcacatgcatgaagacatttgtcatttgcctttcatgcaaaacaccaagtgtccct |
9757672 |
T |
|
| Q |
303 |
tgcaatgcatgcaccacaccaagtgtccctt |
333 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |
|
|
| T |
9757673 |
tgcaatgcatgcaccacaccaagggtccctt |
9757703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 15 - 320
Target Start/End: Original strand, 37287062 - 37287371
Alignment:
| Q |
15 |
gaatacaacaactt-cacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttctctcacaaga |
113 |
Q |
| |
|
|||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||| | ||||||| ||||| || ||||||||| ||| |
|
|
| T |
37287062 |
gaatacaacaactttcacccttagatggagctcactacaatatatctctcaatttgtaaggaacattaacacaaatcggctcactgtttctctcagaagg |
37287161 |
T |
|
| Q |
114 |
aaactctctatgaggatgacttttctctt--gagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatgcttgatca |
211 |
Q |
| |
|
||| ||||||||| || | |||| | || ||||||| || | ||||||| ||||| |||||| ||||| |||||||||||||||||||||||| ||| |
|
|
| T |
37287162 |
aaattctctatgaacatcaattttatgttttgagcaagactttctttctctcttgctttttgttattcttttcttgtggtgtgttgtgaatgcttactca |
37287261 |
T |
|
| Q |
212 |
tggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtcccttgcaatgc |
310 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| ||||| |
|
|
| T |
37287262 |
tggtcctatttataggagaagcaagccaaagttgtcttacatgcatgaagacacttgtcatttgcctttcatgcaaaacactaagtgtcccttgaaatgc |
37287361 |
T |
|
| Q |
311 |
atgcaccaca |
320 |
Q |
| |
|
|||||||||| |
|
|
| T |
37287362 |
atgcaccaca |
37287371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 3346541 - 3346428
Alignment:
| Q |
215 |
tcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatg-caaacaccaagtgtcccttgcaatgcatg |
313 |
Q |
| |
|
||||||||||||||| || ||| ||||||| ||||||||||| |||||| |||||||||| |||||||| ||||| ||||||||||||||||| ||| |
|
|
| T |
3346541 |
tcctatttataggagaagtaagttaaagttgtcttacatgcataaagacacttgtcatttgactttcatgtaaaacatcaagtgtcccttgcaat--atg |
3346444 |
T |
|
| Q |
314 |
caccacaccaagtgtc |
329 |
Q |
| |
|
||||||| || ||||| |
|
|
| T |
3346443 |
caccacaacatgtgtc |
3346428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 384
Target Start/End: Original strand, 37287373 - 37287412
Alignment:
| Q |
345 |
catgtgttactcatacactacaccatgtgtacaccatgca |
384 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
37287373 |
catgtgttactcatacactacaccatgtgtacactatgca |
37287412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 398
Target Start/End: Complemental strand, 3346435 - 3346382
Alignment:
| Q |
345 |
catgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| |||||| ||||||| ||||| |
|
|
| T |
3346435 |
catgtgtcactcatacactacaccatatgtacatcatgcaccttgctatttgtc |
3346382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 398
Target Start/End: Original strand, 38394082 - 38394134
Alignment:
| Q |
346 |
atgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
||||||||||||||||| |||| ||||||||| | |||| |||||||||||| |
|
|
| T |
38394082 |
atgtgttactcatacaccacactatgtgtacatcgtgcacgttgctacttgtc |
38394134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 211; Significance: 1e-115; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 4 - 394
Target Start/End: Complemental strand, 16698522 - 16698127
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||||||||||||||| |||||||||| || |||||||||||||| |||||||||||||||||| ||||||||||| |||||| || ||||||| |
|
|
| T |
16698522 |
aatgataatgggaatacaac---ttcacccttatgtggatctcactacaatgtatctctcaatttgtaagaaacactctcacgaattgggtccctatttc |
16698426 |
T |
|
| Q |
104 |
tctcacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatg |
203 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||||||||||||||||||| | || |||| ||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
16698425 |
tcccacaagaaaactctctatgaggatcacttttctcttgagcaaggctatcttcctctcttgctttttgttgttcttctcttgtggtgtattgtgaatg |
16698326 |
T |
|
| Q |
204 |
cttgatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtccct |
302 |
Q |
| |
|
|||||||||| ||||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||| |||| ||| ||||| ||||||||||| |
|
|
| T |
16698325 |
cttgatcatgatcctatttacaggagaagcaagcaaaagttgccttacatgcatgaagacacttgtcatttggttttcgtgcaaaacatcaagtgtccct |
16698226 |
T |
|
| Q |
303 |
tgcaatgcatgcaccacaccaagtgtccctt-------atgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctact |
394 |
Q |
| |
|
||||||||||||||||||||| ||||| ||| ||||| ||| ||||||| |||||||||||||||| |||||| |||||| ||||||||| |
|
|
| T |
16698225 |
tgcaatgcatgcaccacaccatgtgtctcttgcaatgcatgcaccacaacatgtgtctgtcatacactacaccatatgtacatcatgcaccttgctact |
16698127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 22763984 - 22764029
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcact |
49 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
22763984 |
aatgataatgggaatacaacaacttcactcttaggtgaatctcact |
22764029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 7 - 320
Target Start/End: Complemental strand, 37037957 - 37037643
Alignment:
| Q |
7 |
gataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttctct |
106 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||| ||||||| |||||| | |||||||||| |||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
37037957 |
gataatgagaatacaacaacttcactcttaggtggatctcattacaatctgactctcaatttataagaaacactctcacaaattggctcactatttctct |
37037858 |
T |
|
| Q |
107 |
cacaagaaaactctctatgaggatgacttttctcttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatgctt |
206 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
37037857 |
cacaagaaaactctctatgaggatcacttttctcttgagcaaggctctctttctctcttgctttttgttgtttttctcttgcggtgtgttgtgaatgctt |
37037758 |
T |
|
| Q |
207 |
gatcatggtcctatttataggaggagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtcccttgc |
305 |
Q |
| |
|
| ||||||||||||||||||||| |||||| |||||||| |||||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||| | |
|
|
| T |
37037757 |
gctcatggtcctatttataggagaagcaagacaaagttgtcttacatgcatgaaaacacttgtcatttgtctttcatgcaaaacaccaagtgtcccttcc |
37037658 |
T |
|
| Q |
306 |
aatgcatgcaccaca |
320 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
37037657 |
aatgcatgcaccaca |
37037643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 398
Target Start/End: Complemental strand, 37037641 - 37037588
Alignment:
| Q |
345 |
catgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
37037641 |
catgtgttgctcatacactacaccatgtgtacaccatgcaccttactacttgtc |
37037588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 27642143 - 27641915
Alignment:
| Q |
8 |
ataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttctctc |
107 |
Q |
| |
|
|||||||||||| |||||||||| | ||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
27642143 |
ataatgggaataaaacaacttcatctttaagtggatctcactacaatatatctctctatttgtaaggaacactctcacaaattgacttcctatttctctc |
27642044 |
T |
|
| Q |
108 |
acaagaaaactctctatgaggatgacttttctc--ttgagcaaggctctgtttctctattgctctttgttgttcttctcttgtggtgtgttgtgaatgct |
205 |
Q |
| |
|
| ||| ||||| | || |||||| ||||||||| ||||||||| |||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
27642043 |
aaaaggaaactttttacgaggatcacttttctcttttgagcaagactctctttctctcttgct-tttgttgttcttctcttgtggtgtgttgtgaatgct |
27641945 |
T |
|
| Q |
206 |
tgatcatggtcctatttataggaggagcaa |
235 |
Q |
| |
|
|||| |||||| |||||||||||| ||||| |
|
|
| T |
27641944 |
tgattatggtcttatttataggagaagcaa |
27641915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 26656 - 26795
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactacaatatatctctcaatttgtaaggaacactctcacaaattggctctctatttc |
103 |
Q |
| |
|
|||||||| | ||||||||| ||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26656 |
aatgataacgagaatacaactactccacccttaggtggatctcactacaatttatctctcaatttgtaaggaacactctcacaaattggctcactattt- |
26754 |
T |
|
| Q |
104 |
tctcacaagaaaactct--ctatgaggatgacttttctctt |
142 |
Q |
| |
|
|||||||| |||||||| ||||| |||| |||||| |||| |
|
|
| T |
26755 |
tctcacaaaaaaactctagctatgcggatcacttttatctt |
26795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 230 - 398
Target Start/End: Original strand, 26798 - 26974
Alignment:
| Q |
230 |
gagcaagccaaagttgccttacatgcatgaagacatttgtcatttgcctttcatgc-aaacaccaagtgtcccttgcaatgcatgcaccacaccaagtgt |
328 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||| |||| |||||||||| |||||||||||||| |||||| |||||||||||||| || | |
|
|
| T |
26798 |
gagcaagccaaagttgcctcacatgcatgaagacacttgttattttcctttcatgcaaaacaccaagtgtcagttgcaacacatgcaccacaccatgtat |
26897 |
T |
|
| Q |
329 |
ccctt-------atgcattacatcatgtgttactcatacactacaccatgtgtacaccatgcatcttgctacttgtc |
398 |
Q |
| |
|
| ||| |||||| | | || |||||||||||||||||||| || |||||||||| || ||||||||||||| |
|
|
| T |
26898 |
ctcttgcaatacatgcatcataacacgtgttactcatacactacactatttgtacaccatacaccttgctacttgtc |
26974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 22981542 - 22981494
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
22981542 |
aatgataatgggaatacaacaacttcacccttaggtggatttcactaca |
22981494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 23806866 - 23806914
Alignment:
| Q |
4 |
aatgataatgggaatacaacaacttcacccttaggttgatctcactaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
23806866 |
aatgataatgggaatacaacaacttcacccttaggtggatttcactaca |
23806914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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