View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9696_1D_low_37 (Length: 209)

Name: NF9696_1D_low_37
Description: NF9696_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9696_1D_low_37
NF9696_1D_low_37
[»] chr5 (38 HSPs)
chr5 (12-201)||(10593370-10593559)
chr5 (12-203)||(25078233-25078424)
chr5 (12-203)||(25136202-25136393)
chr5 (12-201)||(40380203-40380392)
chr5 (12-201)||(40382414-40382603)
chr5 (12-185)||(29720476-29720647)
chr5 (12-185)||(29722636-29722807)
chr5 (12-189)||(29751040-29751216)
chr5 (16-187)||(22536174-22536342)
chr5 (12-201)||(16544521-16544712)
chr5 (12-189)||(9789104-9789280)
chr5 (12-201)||(16546743-16546934)
chr5 (12-188)||(16409587-16409764)
chr5 (12-189)||(18441524-18441704)
chr5 (12-168)||(26177994-26178150)
chr5 (12-168)||(26170874-26171030)
chr5 (12-168)||(30182700-30182852)
chr5 (12-187)||(13343172-13343344)
chr5 (12-187)||(36073927-36074099)
chr5 (12-88)||(37439253-37439328)
chr5 (12-185)||(25412872-25413042)
chr5 (12-176)||(13239863-13240025)
chr5 (12-68)||(213577-213633)
chr5 (12-80)||(28278428-28278494)
chr5 (12-68)||(40147373-40147428)
chr5 (12-168)||(32636936-32637088)
chr5 (12-68)||(5058157-5058212)
chr5 (22-88)||(16452202-16452266)
chr5 (12-72)||(19806475-19806534)
chr5 (21-68)||(27015644-27015690)
chr5 (12-66)||(27637615-27637669)
chr5 (24-69)||(38882340-38882384)
chr5 (21-85)||(533890-533952)
chr5 (12-91)||(8565926-8566002)
chr5 (48-88)||(15464517-15464557)
chr5 (12-68)||(16640941-16640996)
chr5 (24-68)||(18596881-18596924)
chr5 (12-72)||(42428427-42428486)
[»] chr1 (42 HSPs)
chr1 (15-201)||(9036531-9036716)
chr1 (12-201)||(44203744-44203933)
chr1 (12-189)||(20622118-20622293)
chr1 (12-189)||(40282489-40282664)
chr1 (12-189)||(21054070-21054245)
chr1 (12-189)||(9987313-9987489)
chr1 (12-188)||(51765509-51765684)
chr1 (12-185)||(8550670-8550843)
chr1 (12-187)||(13316236-13316408)
chr1 (12-88)||(3189442-3189517)
chr1 (12-88)||(3198259-3198334)
chr1 (12-88)||(3207098-3207173)
chr1 (21-80)||(42297963-42298022)
chr1 (12-88)||(20762784-20762859)
chr1 (12-68)||(29136359-29136415)
chr1 (12-68)||(13547090-13547145)
chr1 (12-68)||(13549001-13549056)
chr1 (12-88)||(13659318-13659392)
chr1 (12-68)||(37168410-37168465)
chr1 (23-88)||(834149-834212)
chr1 (12-88)||(4552619-4552693)
chr1 (12-68)||(11348810-11348865)
chr1 (12-68)||(28242416-28242472)
chr1 (12-88)||(28265536-28265610)
chr1 (12-88)||(46065030-46065104)
chr1 (12-68)||(47255340-47255396)
chr1 (12-86)||(28220210-28220282)
chr1 (22-72)||(37033068-37033118)
chr1 (12-68)||(193723-193778)
chr1 (12-68)||(7482231-7482286)
chr1 (12-68)||(31925708-31925763)
chr1 (12-68)||(47115284-47115340)
chr1 (12-87)||(3156977-3157050)
chr1 (21-64)||(34603698-34603740)
chr1 (21-88)||(36683801-36683866)
chr1 (12-87)||(44455272-44455345)
chr1 (12-86)||(28223405-28223477)
chr1 (24-69)||(15916626-15916671)
chr1 (24-69)||(31422862-31422906)
chr1 (12-72)||(31659350-31659409)
chr1 (12-72)||(45644351-45644410)
chr1 (12-88)||(50167157-50167231)
[»] chr7 (42 HSPs)
chr7 (12-203)||(1560530-1560722)
chr7 (12-203)||(18392061-18392252)
chr7 (12-203)||(18388625-18388816)
chr7 (12-203)||(32060187-32060378)
chr7 (12-201)||(6594425-6594614)
chr7 (12-201)||(6592207-6592396)
chr7 (12-163)||(20344009-20344158)
chr7 (12-188)||(39731481-39731656)
chr7 (12-134)||(24789953-24790074)
chr7 (12-189)||(43504036-43504210)
chr7 (12-168)||(35854026-35854180)
chr7 (12-88)||(25766940-25767016)
chr7 (12-88)||(29991165-29991240)
chr7 (12-185)||(23555152-23555323)
chr7 (21-185)||(25615974-25616137)
chr7 (12-72)||(34310712-34310772)
chr7 (12-88)||(48408916-48408992)
chr7 (21-184)||(4178894-4179054)
chr7 (12-87)||(22270085-22270158)
chr7 (12-80)||(2390394-2390461)
chr7 (12-88)||(19502290-19502365)
chr7 (12-68)||(32358055-32358110)
chr7 (130-188)||(24790230-24790288)
chr7 (12-68)||(3259107-3259162)
chr7 (12-68)||(8359316-8359372)
chr7 (12-88)||(41317416-41317490)
chr7 (12-87)||(48489543-48489616)
chr7 (21-87)||(27347938-27348002)
chr7 (12-64)||(6432083-6432134)
chr7 (12-88)||(41648993-41649067)
chr7 (12-68)||(48599335-48599390)
chr7 (22-88)||(12097849-12097913)
chr7 (12-86)||(14069817-14069889)
chr7 (12-86)||(14379845-14379917)
chr7 (21-87)||(18126765-18126829)
chr7 (21-66)||(29608858-29608902)
chr7 (12-68)||(4508707-4508762)
chr7 (12-72)||(8153454-8153513)
chr7 (12-68)||(18396430-18396486)
chr7 (12-72)||(30024729-30024788)
chr7 (12-72)||(31732966-31733025)
chr7 (48-88)||(47263663-47263703)
[»] chr6 (43 HSPs)
chr6 (12-189)||(16578396-16578574)
chr6 (12-189)||(16616806-16616984)
chr6 (12-189)||(16653224-16653402)
chr6 (12-189)||(16554981-16555159)
chr6 (12-189)||(16631537-16631715)
chr6 (12-203)||(25421418-25421609)
chr6 (12-201)||(6027359-6027547)
chr6 (12-192)||(34167192-34167372)
chr6 (12-201)||(13154027-13154216)
chr6 (12-201)||(33341970-33342161)
chr6 (12-192)||(34164970-34165150)
chr6 (12-203)||(27647972-27648154)
chr6 (14-168)||(412216-412369)
chr6 (12-189)||(3072639-3072815)
chr6 (12-170)||(6097349-6097507)
chr6 (12-189)||(2171409-2171588)
chr6 (12-185)||(16452214-16452385)
chr6 (12-185)||(31404561-31404731)
chr6 (12-88)||(30834517-30834592)
chr6 (12-163)||(5406109-5406256)
chr6 (12-163)||(5410434-5410581)
chr6 (12-185)||(5408956-5409125)
chr6 (12-185)||(5413281-5413450)
chr6 (155-201)||(6136170-6136216)
chr6 (12-77)||(3808699-3808764)
chr6 (12-88)||(33160333-33160408)
chr6 (12-88)||(16569134-16569208)
chr6 (12-68)||(21589043-21589098)
chr6 (12-68)||(21593776-21593831)
chr6 (21-68)||(17763111-17763158)
chr6 (12-72)||(33211182-33211241)
chr6 (12-86)||(9183015-9183087)
chr6 (12-68)||(5043739-5043795)
chr6 (12-68)||(17758135-17758191)
chr6 (24-88)||(21356021-21356084)
chr6 (12-68)||(26800699-26800755)
chr6 (12-68)||(26830124-26830179)
chr6 (21-76)||(603081-603135)
chr6 (12-68)||(2972940-2972995)
chr6 (24-68)||(19643894-19643938)
chr6 (12-68)||(22424826-22424882)
chr6 (12-72)||(26954283-26954342)
chr6 (12-68)||(28137409-28137464)
[»] chr3 (53 HSPs)
chr3 (12-201)||(25637539-25637731)
chr3 (12-203)||(3617562-3617753)
chr3 (12-201)||(45283098-45283286)
chr3 (12-201)||(4598390-4598579)
chr3 (12-192)||(10211507-10211687)
chr3 (12-189)||(54635236-54635412)
chr3 (12-192)||(10209287-10209467)
chr3 (12-201)||(4600611-4600800)
chr3 (12-192)||(10056331-10056511)
chr3 (12-192)||(10058553-10058733)
chr3 (12-192)||(10060775-10060955)
chr3 (12-192)||(10062997-10063177)
chr3 (12-192)||(10065219-10065399)
chr3 (12-189)||(6716611-6716789)
chr3 (12-189)||(801204-801376)
chr3 (12-189)||(7779883-7780060)
chr3 (29-192)||(10067435-10067598)
chr3 (12-188)||(23200020-23200194)
chr3 (12-186)||(23197823-23197995)
chr3 (12-185)||(9636010-9636182)
chr3 (12-187)||(5258028-5258200)
chr3 (12-185)||(19683774-19683945)
chr3 (12-185)||(45095275-45095445)
chr3 (12-188)||(5260206-5260379)
chr3 (12-72)||(7762377-7762437)
chr3 (12-72)||(9581394-9581454)
chr3 (21-88)||(37408579-37408645)
chr3 (22-80)||(43401789-43401847)
chr3 (12-87)||(34491324-34491397)
chr3 (22-88)||(7764586-7764651)
chr3 (22-76)||(43403736-43403790)
chr3 (22-80)||(49199457-49199515)
chr3 (12-88)||(16499141-16499215)
chr3 (12-80)||(40913405-40913472)
chr3 (12-68)||(4570064-4570120)
chr3 (12-68)||(6095600-6095655)
chr3 (12-87)||(40735495-40735568)
chr3 (12-88)||(29196368-29196442)
chr3 (12-80)||(30236237-30236304)
chr3 (12-72)||(39153358-39153417)
chr3 (12-72)||(44331657-44331716)
chr3 (12-68)||(54593816-54593871)
chr3 (21-68)||(41819523-41819570)
chr3 (22-88)||(23391891-23391955)
chr3 (22-88)||(32744418-32744482)
chr3 (23-88)||(9666448-9666511)
chr3 (12-88)||(760959-761033)
chr3 (12-60)||(27305719-27305766)
chr3 (12-72)||(40734610-40734669)
chr3 (12-80)||(46173469-46173536)
chr3 (12-80)||(47304363-47304430)
chr3 (23-87)||(51398937-51398999)
chr3 (12-68)||(55301972-55302028)
[»] chr2 (34 HSPs)
chr2 (12-203)||(12647251-12647442)
chr2 (12-203)||(13655894-13656088)
chr2 (12-189)||(6266803-6266979)
chr2 (12-188)||(4484211-4484386)
chr2 (12-188)||(30833458-30833633)
chr2 (21-188)||(32289685-32289853)
chr2 (12-187)||(4503017-4503189)
chr2 (12-185)||(45099866-45100036)
chr2 (12-185)||(36987961-36988132)
chr2 (12-185)||(36205551-36205721)
chr2 (12-88)||(2334399-2334474)
chr2 (12-88)||(6594987-6595062)
chr2 (12-88)||(5723237-5723312)
chr2 (12-68)||(45727041-45727096)
chr2 (12-88)||(723726-723800)
chr2 (12-88)||(34139752-34139826)
chr2 (24-68)||(35446885-35446928)
chr2 (12-87)||(17057352-17057425)
chr2 (12-87)||(17085335-17085408)
chr2 (21-66)||(1631735-1631779)
chr2 (24-88)||(1345590-1345653)
chr2 (12-88)||(11151573-11151647)
chr2 (12-88)||(14633807-14633881)
chr2 (12-68)||(33648284-33648340)
chr2 (12-88)||(36317991-36318065)
chr2 (12-88)||(36773674-36773748)
chr2 (12-72)||(39284948-39285007)
chr2 (21-88)||(11067426-11067491)
chr2 (24-69)||(42064725-42064770)
chr2 (24-80)||(2838079-2838134)
chr2 (12-72)||(17450690-17450748)
chr2 (12-80)||(24398170-24398238)
chr2 (48-88)||(28259249-28259289)
chr2 (12-72)||(38312352-38312411)
[»] scaffold0565 (1 HSPs)
scaffold0565 (12-201)||(2471-2660)
[»] scaffold0674 (1 HSPs)
scaffold0674 (12-203)||(3591-3782)
[»] scaffold0137 (1 HSPs)
scaffold0137 (12-201)||(6385-6576)
[»] chr4 (46 HSPs)
chr4 (12-197)||(8393506-8393692)
chr4 (12-201)||(8395715-8395905)
chr4 (12-203)||(7125014-7125205)
chr4 (12-203)||(7122795-7122986)
chr4 (12-201)||(5136177-5136367)
chr4 (12-201)||(5138402-5138592)
chr4 (12-189)||(31495188-31495372)
chr4 (12-88)||(13992274-13992349)
chr4 (12-88)||(56178618-56178693)
chr4 (12-88)||(48143155-48143230)
chr4 (22-80)||(2209836-2209894)
chr4 (21-185)||(5369968-5370130)
chr4 (12-68)||(29999806-29999862)
chr4 (12-88)||(52095344-52095418)
chr4 (21-80)||(50262689-50262748)
chr4 (24-88)||(52082645-52082708)
chr4 (12-65)||(41964528-41964580)
chr4 (12-68)||(8648251-8648306)
chr4 (12-68)||(41639538-41639593)
chr4 (12-88)||(47038393-47038467)
chr4 (12-88)||(48893620-48893694)
chr4 (12-68)||(50673848-50673903)
chr4 (12-87)||(12739533-12739606)
chr4 (12-87)||(26175619-26175692)
chr4 (21-80)||(54883141-54883199)
chr4 (12-68)||(379492-379548)
chr4 (21-85)||(5871941-5872003)
chr4 (12-88)||(6542161-6542235)
chr4 (12-68)||(6656068-6656123)
chr4 (12-80)||(26364348-26364415)
chr4 (12-72)||(36463386-36463445)
chr4 (12-68)||(46703613-46703669)
chr4 (12-88)||(52467336-52467410)
chr4 (12-87)||(9927441-9927514)
chr4 (12-87)||(12743908-12743981)
chr4 (12-87)||(12745297-12745370)
chr4 (21-88)||(46147373-46147438)
chr4 (22-88)||(24969787-24969851)
chr4 (22-88)||(31474273-31474337)
chr4 (23-88)||(45687164-45687227)
chr4 (24-80)||(5396720-5396775)
chr4 (12-72)||(5429791-5429850)
chr4 (12-48)||(8665520-8665556)
chr4 (12-68)||(12073504-12073560)
chr4 (12-80)||(12119652-12119719)
chr4 (12-72)||(27416962-27417021)
[»] chr8 (31 HSPs)
chr8 (12-189)||(3439615-3439791)
chr8 (12-189)||(25690066-25690243)
chr8 (12-201)||(15290636-15290825)
chr8 (12-201)||(15471005-15471194)
chr8 (12-201)||(42575192-42575380)
chr8 (12-188)||(2627848-2628024)
chr8 (14-187)||(31218371-31218541)
chr8 (12-185)||(17982765-17982935)
chr8 (12-168)||(42498306-42498459)
chr8 (12-187)||(19945243-19945415)
chr8 (12-185)||(34254217-34254387)
chr8 (12-185)||(34256393-34256563)
chr8 (12-185)||(44303967-44304137)
chr8 (12-88)||(1746200-1746275)
chr8 (21-68)||(42434992-42435038)
chr8 (21-87)||(43036544-43036608)
chr8 (12-88)||(4743196-4743270)
chr8 (12-80)||(10930188-10930255)
chr8 (21-88)||(3303652-3303717)
chr8 (12-87)||(15212898-15212971)
chr8 (21-68)||(18655521-18655567)
chr8 (15-88)||(1345353-1345424)
chr8 (23-68)||(11384108-11384152)
chr8 (12-68)||(4283636-4283691)
chr8 (12-72)||(33352262-33352321)
chr8 (12-72)||(40321192-40321251)
chr8 (21-72)||(27811399-27811449)
chr8 (23-87)||(4733829-4733891)
chr8 (12-72)||(5689383-5689442)
chr8 (12-72)||(12702631-12702690)
chr8 (12-72)||(40221857-40221916)
[»] scaffold1808 (1 HSPs)
scaffold1808 (36-201)||(1-166)
[»] scaffold0491 (2 HSPs)
scaffold0491 (12-188)||(11042-11217)
scaffold0491 (12-188)||(8616-8791)
[»] scaffold0286 (1 HSPs)
scaffold0286 (12-88)||(11669-11745)
[»] scaffold0002 (1 HSPs)
scaffold0002 (12-168)||(434645-434798)
[»] scaffold1519 (1 HSPs)
scaffold1519 (12-187)||(1027-1200)
[»] scaffold0176 (1 HSPs)
scaffold0176 (12-68)||(18004-18060)
[»] scaffold0016 (1 HSPs)
scaffold0016 (12-72)||(114714-114774)
[»] scaffold0006 (1 HSPs)
scaffold0006 (12-88)||(149079-149153)
[»] scaffold0236 (1 HSPs)
scaffold0236 (21-68)||(10610-10656)
[»] scaffold0466 (1 HSPs)
scaffold0466 (21-68)||(7448-7494)
[»] scaffold0066 (1 HSPs)
scaffold0066 (12-87)||(20398-20471)
[»] scaffold0140 (1 HSPs)
scaffold0140 (48-88)||(8491-8531)


Alignment Details
Target: chr5 (Bit Score: 182; Significance: 1e-98; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 10593370 - 10593559
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10593370 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttctacttccctctccttgtttat 10593469  T
Q  112 cttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10593470 cttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtt 10593559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 25078233 - 25078424
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||  |    
T  25078233 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--a 25078330  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25078331 tcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcg 25078424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 25136202 - 25136393
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||  |    
T  25136202 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--a 25136299  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25136300 tcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcg 25136393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 40380203 - 40380392
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||  ||||||||    
T  40380203 tggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgttta 40380300  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40380301 tcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtt 40380392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 40382414 - 40382603
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||  ||||||||    
T  40382414 tggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgttta 40382511  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40382512 tcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtt 40382603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 29720476 - 29720647
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||    
T  29720476 tggagagtacaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcct--tttat 29720573  T
Q  112 cttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttg 185  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||    
T  29720574 cttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttg 29720647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 29722636 - 29722807
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||    
T  29722636 tggagagtacaatctctcctccagagtaggtcaaatttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcct--tttat 29722733  T
Q  112 cttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttg 185  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||    
T  29722734 cttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttg 29722807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 29751216 - 29751040
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt-atttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  ||||    
T  29751216 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccctctcct--ttta 29751119  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    |||||||||||||   |||||||| ||||||||| |||||||| |||||||||||||||||||| || |||||||||||    
T  29751118 tcttgtgattgtgtactgtgtttctcacttgttttctagattatatctaggtggtgttttgttgattattgcttgcaca 29751040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 22536342 - 22536174
Alignment:
Q  16 gagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttatcttg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||  |||||||||    
T  22536342 gagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctcccct--tttatcttg 22536245  T
Q  116 tgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgca 187  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||||| || |||||||| || |||||||||    
T  22536244 tgattgtgttttgagtttctcacttgtttcctagattagatctaggt-gttttttgttgattgttgcttgca 22536174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 16544521 - 16544712
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctcc-ttgttt 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| ||||||    
T  16544521 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctcctttgttt 16544620  T
Q  110 atcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||  |||||||    
T  16544621 atcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaataagctttgtt 16544712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 9789280 - 9789104
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||  |||||    
T  9789280 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcc--gttta 9789183  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||| |||||  ||||||||  ||||| |||||||||||||||||||||| |||||||||| || |||||||||||    
T  9789182 tcttgtgcttgtgtattgtgtttttcacttctttcctagattagatctaggtgctgttttgttgatttttgcttgcaca 9789104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 16546743 - 16546934
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctcc-ttgttt 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| ||||||    
T  16546743 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctcctttgttt 16546842  T
Q  110 atcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||| ||   |||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||  |||||||    
T  16546843 atcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatttaggtggtgttttgttgtttcttgcttgctcaataagctttgtt 16546934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 16409587 - 16409764
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||  ||||    
T  16409587 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcct--ttta 16409684  T
Q  111 tcttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgcac 188  Q
    ||||||| ||||| ||| || ||  ||| ||||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  16409685 tcttgtgcttgtgttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 16409764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 18441704 - 18441524
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||  |||||    
T  18441704 tggagagttcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcc--gttta 18441607  T
Q  111 tcttgtgattgtgctttgtg----tttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||| |||||  |||||    |||  ||||| |||||||||||||||||||||| |||||||||| || |||||||||||    
T  18441606 tcttgtgcttgtgtattgtgtttttttttcacttctttcctagattagatctaggtgctgttttgttgattattgcttgcaca 18441524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 26177994 - 26178150
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||  ||||    
T  26177994 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcct--ttta 26178091  T
Q  111 tcttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt 168  Q
    ||||||| ||||| ||| || ||  ||| ||| ||||||||||||||||||||| ||||    
T  26178092 tcttgtgcttgtgttttatgcttttcactttgattcctagattagatctaggtgttgtt 26178150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 26170874 - 26171030
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||  ||||    
T  26170874 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcct--ttta 26170971  T
Q  111 tcttgtgattgtgctttgtgtttcaca-cttgtttcctagattagatctaggtggtgtt 168  Q
    ||||||| ||||| ||| || ||  ||  ||| ||||||||||||||||||||| ||||    
T  26170972 tcttgtgcttgtgttttatgcttttcattttgattcctagattagatctaggtgttgtt 26171030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 30182700 - 30182852
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  30182700 tggagagttcaatctctcctccagagtatgtcaagtttggaccgaactggatgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 30182794  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt 168  Q
    |||||| ||||| |||||| ||  ||| ||||||||||||||||||||||||| ||||    
T  30182795 cttgtgcttgtgttttgtgcttttcactttgtttcctagattagatctaggtgttgtt 30182852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 13343172 - 13343344
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||| |||||||   ||||  |||||||  |||||    
T  13343172 tggagagttcaatctctcctccagagtaggtcatgtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctctctt--ctctcct--tttat 13343266  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgca 187  Q
     || || ||||| |||||| ||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||||    
T  13343267 attttgcttgtggtttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgca 13343344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 36074099 - 36073927
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  36074099 tggagagttcaatctctcctccaaagtaggtcaagtttggaccgaactggatgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 36074005  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgca 187  Q
     || || ||||| |||||| ||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||||    
T  36074004 gttttgcttgtgatttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgca 36073927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 37439253 - 37439328
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  37439253 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgttt 37439328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 25412872 - 25413042
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  25412872 tggagagatcaatctctcctccagagtaggtcaagtttggactgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 25412966  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||| || ||||| |||||| ||  | | ||| |||||||||||||| |||||| |||| |||||| || |||||||    
T  25412967 cttttgcttgtggtttgtgcttttctctttgattcctagattagatataggtgctgttattgttgattattgcttg 25413042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 13239863 - 13240025
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| |||||||   ||||  |||||||  |||||    
T  13239863 tggagagatcaatctctcctccagagtaggtcaaatttggaccgaactgggtgaacaat-ttttggtgtgtttgtttctctctt--ctctcct--tttat 13239957  T
Q  112 cttgtgattgt-gctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtt 176  Q
    ||| || |||| | |||||||||  ||| ||| || |||||||||||||||||| |||| ||||||||    
T  13239958 cttttgcttgtggttttgtgtttttcactttgattactagattagatctaggtgttgttattgttgtt 13240025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 213577 - 213633
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||||||||||||    
T  213577 tggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 213633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 28278428 - 28278494
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  28278428 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacaat-tcttggtgt 28278494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 40147373 - 40147428
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  40147373 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 40147428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 32636936 - 32637088
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||||||| |||||||| ||||||| |||||||   ||||||||| |    |||||    
T  32636936 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatct-ttggtgtgtttgtttctctcttccctccc----tttat 32637029  T
Q  112 cttgtgattgtg-ctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt 168  Q
    |||||| |||||  |||| ||||  ||| ||| || |||||||||||||||||| ||||    
T  32637030 cttgtgcttgtgattttgagtttttcactttgattactagattagatctaggtgttgtt 32637088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 5058157 - 5058212
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  5058157 tggagagatcaatctctcctctagagtaggtcaag-ttggaccgaactgggtgaaca 5058212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 16452202 - 16452266
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    ||||||||| ||||||||||||||| |||||||||||||||| ||| || ||||||||| |||||||    
T  16452202 aatctctcccccagagtaggtcaag-ttggaccgaactgggtaaac-atttcttggtgtgtttgttt 16452266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 19806475 - 19806534
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  19806475 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatct 19806534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 27015644 - 27015690
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||||    
T  27015644 caatctctcctccaaaataggtcaagtt-ggaccgaactgggtgaaca 27015690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 27637669 - 27637615
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 66  Q
    |||||||  ||||||||||| ||||||||||||   |||||||||||||||||||    
T  27637669 tggagagatcaatctctcctgcagagtaggtcattgttggaccgaactgggtgaa 27637615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 38882340 - 38882384
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaacaa 69  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||    
T  38882340 tctctcctccagactaggtcaa-tttggaccgaactgggtcaacaa 38882384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 533890 - 533952
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttg 85  Q
    |||||||||| ||| | ||||||||||| |||||||||||||| |||||||| ||||||| ||||    
T  533890 caatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtctttg 533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 8566002 - 8565926
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttct 91  Q
    |||||||  |||||||||  ||||| ||||||||||| |||||||||| ||| |||||  ||||||||| ||||||||||    
T  8566002 tggagagatcaatctctcacccagattaggtcaagtt-ggaccgaactaggtcaacaa--tcttggtgtgtttgttttct 8565926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 15464557 - 15464517
Alignment:
Q  48 ttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||||||||| |||||||| ||||||| |||||||    
T  15464557 ttggaccgaactgggtcaacaatcttttggtgtgtttgttt 15464517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 16640996 - 16640941
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| | || ||||||||||| ||||    
T  16640996 tggagagatcaatctctcctccagagtaggtcaag-tagggccgaactgggtaaaca 16640941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 18596881 - 18596924
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||    
T  18596881 tctctcctccagactaggtcaa-tttggaccgaactgggtcaaca 18596924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 42428486 - 42428427
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||| | ||||||||||| |||||||||||||| ||||||||    
T  42428486 tggagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatct 42428427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 5e-92; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 9036531 - 9036716
Alignment:
Q  15 agagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttatctt 114  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9036531 agagtacaatctctcctcgagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttatctt 9036630  T
Q  115 gtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  9036631 gtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaa-acactttgtt 9036716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 44203744 - 44203933
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||  |    
T  44203744 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--a 44203841  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44203842 tcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtt 44203933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 20622293 - 20622118
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||    
T  20622293 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcct--tttat 20622196  T
Q  112 cttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  20622195 cttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcaca 20622118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 40282489 - 40282664
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||    
T  40282489 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcct--tttat 40282586  T
Q  112 cttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  40282587 cttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcaca 40282664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 21054070 - 21054245
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||    
T  21054070 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctcttggtgtatttgttttcttcttccctctcct--tttat 21054167  T
Q  112 cttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  21054168 cttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcaca 21054245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 9987313 - 9987489
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt-atttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  ||||    
T  9987313 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccctctcct--ttta 9987410  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    |||||||||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  9987411 tcttgtgattgtgtatagtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcaca 9987489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 51765509 - 51765684
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||  |||||    
T  51765509 tggagagttcaatctctcctccagagtaggacaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcctcttccctctcct--tttat 51765605  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgcac 188  Q
    |||||| ||||| |||||| ||  ||| ||||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  51765606 cttgtgcttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 51765684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 8550843 - 8550670
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttct-tcttccctctccttgttta 110  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||| | ||||  | ||||    
T  8550843 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgttttctctctt-cttctc--tcttta 8550748  T
Q  111 tcttgtgattgtg-ctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||||||| |||||  |||||||||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  8550747 tcttgtgcttgtgattttgtgtttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttg 8550670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 13316408 - 13316236
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  |||||||   ||||  |||||||  |||||    
T  13316408 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttagtgagtttgtttctctctt--ctctcct--tttat 13316314  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgca 187  Q
     || || ||||| |||||||||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||||    
T  13316313 attttgcttgtggtttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgca 13316236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 3189442 - 3189517
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  3189442 tggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgttt 3189517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 3198259 - 3198334
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  3198259 tggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgttt 3198334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 3207098 - 3207173
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  3207098 tggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgttt 3207173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 42298022 - 42297963
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  42298022 caatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtgt 42297963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 20762784 - 20762859
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||    
T  20762784 tggagagatcaatctctcctacagagtaggtcaagtttggaccgaactaggtgaccaatct-ttggtgtgtttgttt 20762859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 29136359 - 29136415
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29136359 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaaca 29136415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 13547145 - 13547090
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  13547145 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 13547090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 13549056 - 13549001
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  13549056 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 13549001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 13659392 - 13659318
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||    
T  13659392 tggagagatcaatctctcccccagagtaggttaagtt-ggaccgaactgggtcaacaatct-ttggtgtatttgttt 13659318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 37168410 - 37168465
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  37168410 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 37168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 834212 - 834149
Alignment:
Q  23 atctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||||| ||||||| |||||||    
T  834212 atctctcccccagagtaggtcaag-ttggaccgaactgggtcaacaatct-ttggtgtgtttgttt 834149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 4552693 - 4552619
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  ||||||||||  |||||||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  4552693 tggagagatcaatctctccctcagagtaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 4552619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 11348810 - 11348865
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||| |||||||    
T  11348810 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgagtgaaca 11348865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 28242416 - 28242472
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||||||||||||   |||||||||||||||||||||    
T  28242416 tggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaaca 28242472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 28265610 - 28265536
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  28265610 tggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 28265536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 46065030 - 46065104
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||||||||||||| ||||| |||||||||| |||||||| ||||||| |||||||    
T  46065030 tggagagatcaatctctcccccagagtaggtcaag-ttggatcgaactgggtaaacaatct-ttggtgtgtttgttt 46065104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 47255396 - 47255340
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||||||||||||   |||||||||||||||||||||    
T  47255396 tggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaaca 47255340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 28220282 - 28220210
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgt 86  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||    
T  28220282 tggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgt 28220210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 37033118 - 37033068
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    ||||||| ||||| ||||||||| | |||||||||||||||||||||||||    
T  37033118 aatctcttctccatagtaggtcatggttggaccgaactgggtgaacaatct 37033068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 193723 - 193778
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||| |||||||||| |||||||| |||||||||||||||||||    
T  193723 tggagagatcaatctcttctccagagtatgtcaagtt-ggaccgaactgggtgaaca 193778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 7482286 - 7482231
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  7482286 tggagagatcaatctctccttcagagtaggtcaag-ttggaccgaactaggtgaaca 7482231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 31925763 - 31925708
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  31925763 tggagagatcaatctctcctctagagtaggtcaag-ttggaccgaactaggtgaaca 31925708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 47115284 - 47115340
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||| |||||||||||||||   |||||||||||||||||||||    
T  47115284 tggagagatcaatctctgctccagagtaggtcattgttggaccgaactgggtgaaca 47115340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 3156977 - 3157050
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||| | ||||||||||| |||||||||||||| |||||||| ||||||| ||||||    
T  3156977 tggagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgtt 3157050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 34603698 - 34603740
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtg 64  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  34603698 caatctctcctccagagtaggtcaag-ttggaccgaactaggtg 34603740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 36683801 - 36683866
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||| ||||||||||||||| || |||||||||| || ||| |||||||||||| |||||||    
T  36683801 caatctctcccccagagtaggtcaag-ttagaccgaactgagtaaac-atctcttggtgtgtttgttt 36683866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 44455272 - 44455345
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||||| |||||||||||| ||||||||||||| ||| |||| ||||||| ||||||    
T  44455272 tggagagatcaatctctcccccagattaggtcaagttt-gaccgaactgggtcaacgatct-ttggtgtgtttgtt 44455345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 28223477 - 28223405
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgt 86  Q
    |||||||  |||||||||| ||| | ||||||||||| |||||||||||||| |||||||| ||||||| |||||    
T  28223477 tggagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgt 28223405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 15916626 - 15916671
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaacaa 69  Q
    ||||||| ||||| |||||||| ||||||||||||||||| |||||    
T  15916626 tctctcccccagactaggtcaattttggaccgaactgggtaaacaa 15916671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 31422906 - 31422862
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaacaa 69  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||||    
T  31422906 tctctcctccagactaggtcaa-tttggaccgagctgggtgaacaa 31422862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 31659350 - 31659409
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  ||||||||||  |||| ||||||||||| |||||||||||||| ||||||||    
T  31659350 tggagagatcaatctctccctcagattaggtcaagtt-ggaccgaactgggtcaacaatct 31659409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 45644410 - 45644351
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||| ||||| ||||| ||||||||||| |||||||||||||| ||||||||    
T  45644410 tggagagatcaatatctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct 45644351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 50167231 - 50167157
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||| ||| ||||||| |||||||||| ||| |||||||| ||||||| |||||||    
T  50167231 tggagagatcaatctctcccccagattagctcaagtt-ggaccgaactaggtcaacaatct-ttggtgtgtttgttt 50167157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 1560722 - 1560530
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  1560722 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtaaccaatctcttggtgtatttgttttcttcttccctctccttgtttat 1560623  T
Q  112 cttgtgattg-tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  1560622 cttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatatactctgttcg 1560530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 18392252 - 18392061
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||  |    
T  18392252 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--a 18392155  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18392154 tcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcg 18392061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 18388816 - 18388625
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||| ||||  |    
T  18388816 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctctttgt--a 18388719  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18388718 tcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcg 18388625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 32060378 - 32060187
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||||||||||||||  ||||||||    
T  32060378 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaacttggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgttta 32060281  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32060280 tcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcg 32060187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 6594614 - 6594425
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||  ||||||||    
T  6594614 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgttta 6594517  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6594516 tcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtt 6594425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 6592396 - 6592207
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||  |||||||     
T  6592396 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgtttt 6592299  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6592298 tcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtt 6592207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 20344009 - 20344158
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgtatttgttttcttcttccctctccttgttta 110  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||  |||    
T  20344009 tggagagtacaatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccctctcctt--tta 20344105  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtg 163  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  20344106 tcttgtgattgtgttttgtgtttctcacttgtttcctagattagatctaggtg 20344158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 39731481 - 39731656
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||  |||||    
T  39731481 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcctcttccctctcct--tttat 39731577  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgcac 188  Q
    |||||| ||||| |||||| ||  ||| ||||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  39731578 cttgtgcttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 39731656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 24789953 - 24790074
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttg-ttttcttcttccctctccttgttta 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  ||||    
T  24789953 tggagagtactatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgtttttcttcttccctctcct--ttta 24790050  T
Q  111 tcttgtgattgtgctttgtgtttc 134  Q
    |||||||||||||| |||||||||    
T  24790051 tcttgtgattgtgcattgtgtttc 24790074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 43504210 - 43504036
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||    
T  43504210 tggagagttcaatctctcctccatagtaggtcaagtttggatcgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctcct--tttat 43504113  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    |||||| ||||| ||| || ||  ||| ||| |||||||||||||||||| ||   |||||||| || |||||||||||    
T  43504112 cttgtgcttgtgttttatgcttttcactttgattcctagattagatctagctg--tttttgttgattattgcttgcaca 43504036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 35854026 - 35854180
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||| ||| |||  |||||    
T  35854026 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtgtttgtttctctcttctctc-cct--tttat 35854122  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt 168  Q
    |||||| ||||| ||| || ||  ||| ||| ||||||||||||||||||||| ||||    
T  35854123 cttgtgcttgtgttttatgcttttcactttgcttcctagattagatctaggtgctgtt 35854180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 25767016 - 25766940
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  25767016 tggagagttcaatctctcctccagagtaggtcaagtttagaccgaactgggtgaacaatctcttggtgtgtttgttt 25766940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 29991165 - 29991240
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  29991165 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgttt 29991240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 23555152 - 23555323
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||   ||||  |||||||  |||||    
T  23555152 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctctctt--ctctcct--tttat 23555246  T
Q  112 cttgtgattgtgct-ttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||| || ||||| | ||||||||   || ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  23555247 cttttgcttgtggtattgtgttttttactttgattcctagattagatctaggtgttgttattgttgattattgcttg 23555323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 185
Target Start/End: Original strand, 25615974 - 25616137
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt---tcttcttccctctccttgtttatcttgtg 117  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||   |||||||| |||      |||||||||||    
T  25615974 caatctctcctccagagtaggtcaagtttggaccgaactgggcgaacaatct-ttggtgtgtttgtttctctcttcttctctc------tttatcttgtg 25616066  T
Q  118 attgt-gctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
     |||| | |||||| ||  ||||| | ||||||||||||||||||||| |||| |||||| || |||||||    
T  25616067 cttgtggttttgtgcttttcacttcgattcctagattagatctaggtgttgttattgttgattattgcttg 25616137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 34310772 - 34310712
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34310772 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 34310712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 48408916 - 48408992
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    ||||||||  |||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||||    
T  48408916 tggagagtttaatctctcctccagagtatgtcaagtttagaccgaactgggtgaacaatttcttggtgtgtttgttt 48408992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 4178894 - 4179054
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttatcttgtgatt 120  Q
    ||||||||||||||||| |||||||||||| ||| |||| |||||||||||| ||||||| |||||||   ||||  |||||||  ||||| || || ||    
T  4178894 caatctctcctccagagcaggtcaagtttgaaccaaactaggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttatattttgctt 4178988  T
Q  121 gtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgctt 184  Q
    ||| |||||||||  ||| ||| ||||||||||||||||||||| |||| |||||| || ||||||    
T  4178989 gtggtttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgctt 4179054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 22270085 - 22270158
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  22270085 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaac-atctcttggtgtgtttgtt 22270158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 2390394 - 2390461
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  2390394 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactaggtgaataatctcttggtgt 2390461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 19502290 - 19502365
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  ||||||||||||||||||| |||||||||||| |||| |||||||||||||| ||||||| |||||||    
T  19502290 tggagagatcaatctctcctccagagtaagtcaagtttggaacgaagtgggtgaacaatct-ttggtgtgtttgttt 19502365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 32358110 - 32358055
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  32358110 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 32358055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 24790230 - 24790288
Alignment:
Q  130 gtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcac 188  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| || || |||||||    
T  24790230 gtttctcacctgtttcctagattagatctaggtggtgttttgttgattattacttgcac 24790288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 3259107 - 3259162
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  3259107 tggagagatcaatctctcctccagagtaggtcaag-ttgaaccgaactgggtgaaca 3259162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 8359372 - 8359316
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||||||||||||   |||||||||||||||||||||    
T  8359372 tggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaaca 8359316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 41317490 - 41317416
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  41317490 tggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 41317416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 48489543 - 48489616
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||||||| |||||||| ||||||| ||||||    
T  48489543 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtaaacaatct-ttggtgtgtttgtt 48489616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 27347938 - 27348002
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| ||||||    
T  27347938 caatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgtt 27348002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 6432083 - 6432134
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtg 64  Q
    |||||||  ||||||||||| |||||||||||||| |||||||||||||||||    
T  6432083 tggagagatcaatctctccttcagagtaggtcaag-ttggaccgaactgggtg 6432134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 41649067 - 41648993
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||| | ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  41649067 tggagagatcaatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 41648993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 48599390 - 48599335
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||||| || ||||||| |||||||||||||||||||    
T  48599390 tggagagatcaatctctcctccagagcagatcaagtt-ggaccgaactgggtgaaca 48599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 12097913 - 12097849
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    ||||||||| ||||| ||||||||| |||||||||||| ||| |||||||| ||||||| |||||||    
T  12097913 aatctctcccccagattaggtcaag-ttggaccgaactaggtcaacaatct-ttggtgtgtttgttt 12097849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 14069889 - 14069817
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgt 86  Q
    |||||||  |||||||||| | ||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||    
T  14069889 tggagagatcaatctctccccaagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgt 14069817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 14379917 - 14379845
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgt 86  Q
    |||||||  |||||||||| | ||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||    
T  14379917 tggagagatcaatctctcccctagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgt 14379845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 18126765 - 18126829
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||||| ||||| |||||||||||| |||||| |||||| |||||||| ||||||| ||||||    
T  18126765 caatctctcccccagactaggtcaagttt-gaccgacctgggtcaacaatct-ttggtgtgtttgtt 18126829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 29608858 - 29608902
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 66  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||    
T  29608858 caatcactcctccagagtaggtcaag-ttggaccgaactgagtgaa 29608902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 4508762 - 4508707
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||| || |||||||||| ||||| |||||||||||||||||||    
T  4508762 tggagagatcaatctcttcttcagagtaggttaagtt-ggaccgaactgggtgaaca 4508707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 8153454 - 8153513
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| ||||||||| |||||| ||||||||| ||||||||    
T  8153454 tggagagatcaatctctcccccagattaggtcaag-ttggactgaactgggtcaacaatct 8153513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 18396430 - 18396486
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||| ||||||||||||   ||||||||||||||| ||||    
T  18396430 tggagagatcaatctctcctcaagagtaggtcaatggtggaccgaactgggtaaaca 18396486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 30024788 - 30024729
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  ||||| |||| ||||||||||||||| |||||||||||||| | ||||||||    
T  30024788 tggagagatcaatcactcccccagagtaggtcaag-ttggaccgaactggatcaacaatct 30024729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 31733025 - 31732966
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||| | ||||||||||| |||||||||||||| ||||||||    
T  31733025 tggagagatcaatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatct 31732966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 47263703 - 47263663
Alignment:
Q  48 ttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||||||||| |||||||| ||||||| |||||||    
T  47263703 ttggaccgaactgggtcaacaatcttttggtgtgtttgttt 47263663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 7e-85; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 16578574 - 16578396
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16578574 tggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgttta 16578475  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16578474 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcaca 16578396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 16616806 - 16616984
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16616806 tggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgttta 16616905  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16616906 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcaca 16616984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 16653224 - 16653402
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16653224 tggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgttta 16653323  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16653324 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcaca 16653402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 16554981 - 16555159
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16554981 tggagagtgcaaactctcctccaaagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgttta 16555080  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16555081 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcaca 16555159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 16631537 - 16631715
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16631537 tggagagtgcaaactctcctccaaagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgttta 16631636  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16631637 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcaca 16631715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 25421418 - 25421609
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||  ||||||||    
T  25421418 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgttta 25421515  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25421516 tcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcg 25421609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 6027359 - 6027547
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||  | | ||||    
T  6027359 tggagagtacaatctctcctccagagtatgtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cat-ttta 6027455  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6027456 tcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacaccttgtt 6027547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 34167192 - 34167372
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||  ||    
T  34167192 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttg--ta 34167289  T
Q  111 tcttgtgattg-tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaata 192  Q
    ||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  34167290 tcttgtgattgttgctttgtgtttcacacttggttcctagatttgatctaggtggtgttttgttgttttttgcttgctcaata 34167372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 13154027 - 13154216
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||  ||    
T  13154027 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttg--ta 13154124  T
Q  111 tcttgtgattg-tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    ||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||  |||||||    
T  13154125 tcttgtgattgttgctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttgcttgctcaataagctttgtt 13154216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 33342161 - 33341970
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctcc-ttgttt 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| ||||||    
T  33342161 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctcctttgttt 33342062  T
Q  110 atcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||| ||   |||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  33342061 atcttgtgtttagttgctt--tgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataagctttgtt 33341970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 34164970 - 34165150
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  34164970 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgttta 34165069  T
Q  111 tcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaata 192  Q
    ||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  34165070 tcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaata 34165150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 27647972 - 27648154
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  |||||    
T  27647972 tggagagtacaaactctcctccagagtagatcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctctcct--tttat 27648069  T
Q  112 cttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |      |||||  ||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||||||||||    
T  27648070 c------ttgtgtattgagtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcac-acacactttgttcg 27648154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 412216 - 412369
Alignment:
Q  14 gagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgtatttgttttcttcttccctctccttgtttatc 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||    
T  412216 gagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctcct--tttatc 412313  T
Q  113 ttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgtt 168  Q
    ||||| |||||  ||||||||  |||||||| ||||||||||||||||||| ||||    
T  412314 ttgtgcttgtgtattgtgtttttcacttgttacctagattagatctaggtgctgtt 412369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 3072815 - 3072639
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||    
T  3072815 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctcct--tttat 3072718  T
Q  112 cttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggt-gttttgttgtttcttgcttgcaca 189  Q
    |||||| ||||| ||| || ||  |||||||||||||||||||||||| ||| |  |||||||| || |||||||||||    
T  3072717 cttgtgcttgtgttttatgcttttcacttgtttcctagattagatctatgtgctatttttgttgattattgcttgcaca 3072639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 6097507 - 6097349
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||  ||    
T  6097507 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctccttg--ta 6097410  T
Q  111 tcttgtgattgtgctttgtg-tttcacacttgtttcctagattagatctaggtggtgtttt 170  Q
    |||||||||||||  ||||| |||  |||||||| ||||||||||||| ||||| ||||||    
T  6097409 tcttgtgattgtgtattgtgtttttccacttgttacctagattagatcaaggtgctgtttt 6097349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 2171588 - 2171409
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| ||| |||  |||||    
T  2171588 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtttatctcttctctc-cct--tttat 2171492  T
Q  112 cttgtgattgtgctttgtg---tttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgcaca 189  Q
    |||||| ||||| ||| ||   |||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||||||    
T  2171491 cttgtgcttgtgttttatgttttttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcaca 2171409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 16452385 - 16452214
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||||| | |||    
T  16452385 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatat 16452289  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
     || || ||||| |||||| ||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  16452288 -ttttgcttgtggtttgtgcttttcactttgattcctagattagatctaggtgatgttattgttgattattgcttg 16452214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 31404731 - 31404561
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  31404731 tggagagatcaatctctcctccagagtaggccaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 31404637  T
Q  112 cttgtgattgtgctttgtg-tttcacacttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||| || ||||| |||||| ||||    ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  31404636 cttttgcttgtggtttgtgctttcctctttgattcctagattagatctaggtgctgttattgttgattattgcttg 31404561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 30834592 - 30834517
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  30834592 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaataatct-ttggtgtgtttgttt 30834517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 5406256 - 5406109
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  5406256 tggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 5406162  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtg 163  Q
    ||| || ||||| |||||| ||  | | ||| |||||||||||||||||||||    
T  5406161 cttttgtttgtggtttgtgcttttctctttgattcctagattagatctaggtg 5406109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 5410581 - 5410434
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  5410581 tggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 5410487  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtg 163  Q
    ||| || ||||| |||||| ||  | | ||| |||||||||||||||||||||    
T  5410486 cttttgtttgtggtttgtgcttttctctttgattcctagattagatctaggtg 5410434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 5409125 - 5408956
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  5409125 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaact-ggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 5409032  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||| || ||||| |||||| ||  | | ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  5409031 cttttgcttgtggtttgtgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttg 5408956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 5413450 - 5413281
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  5413450 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaact-ggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 5413357  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||| || ||||| |||||| ||  | | ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  5413356 cttttgcttgtggtttgtgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttg 5413281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 6136216 - 6136170
Alignment:
Q  155 atctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  6136216 atctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 6136170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 3808764 - 3808699
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttgg 77  Q
    |||||||  |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  3808764 tggagagatcaatctctcctccagagtaggtcatgattggaccgaactaggtgaacaatctcttgg 3808699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 33160408 - 33160333
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  33160408 tggagagatcaatctctcctccagagtatttcaagtttggaccaaactgggtgaacaatct-ttggtgtgtttgttt 33160333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 16569134 - 16569208
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||| |||||||    
T  16569134 tggagagatcaatctctcctccagattaggtcaag-ttggaccgaactgggtcaacaatct-ttggtgtgtttgttt 16569208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 21589043 - 21589098
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  21589043 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 21589098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 21593776 - 21593831
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  21593776 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 21593831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 17763111 - 17763158
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||    
T  17763111 caatctctcctccagagtagatcaagtttggaccgaactaggtgaaca 17763158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 33211241 - 33211182
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  33211241 tggagagatcaatctctcccccagagtaggtcaag-ttggaccgaactgggtcaacaatct 33211182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 9183087 - 9183015
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgt 86  Q
    |||||||  |||||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||| |||||    
T  9183087 tggagagatcaatctctcctccagattatgtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgt 9183015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 5043739 - 5043795
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||| |||||||||   |||||||||||||||||||||    
T  5043739 tggagagatcaatctctcctccatagtaggtcattgttggaccgaactgggtgaaca 5043795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 17758135 - 17758191
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||| |||| ||||||| |||||||||||||||||| ||||||||    
T  17758135 tggagagatcaatctcccctctagagtagttcaagtttggaccgaactaggtgaaca 17758191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 21356084 - 21356021
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    ||||||||||||| |||||||  || |||||||||||||| |||||||| ||||||| |||||||    
T  21356084 tctctcctccagattaggtcatatt-ggaccgaactgggtcaacaatcttttggtgtgtttgttt 21356021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 26800699 - 26800755
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||||||||||||   |||||||||||||| ||||||    
T  26800699 tggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaaca 26800755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 26830179 - 26830124
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  26830179 tggagagatcaatctctcctccaaagtaggtcaagttt-gactgaactgggtgaaca 26830124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 603135 - 603081
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttg 76  Q
    |||||||||| | ||| ||||||||||| |||||||||||||| ||||||||||||    
T  603135 caatctctccccaagattaggtcaagtt-ggaccgaactgggtcaacaatctcttg 603081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 2972995 - 2972940
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||| ||||||||||||| || ||||||||| ||||||||    
T  2972995 tggagagatcaatctctcctcaagagtaggtcaag-ttcgaccgaactaggtgaaca 2972940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 19643894 - 19643938
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||| ||||||||||||| ||||||||||||| ||| ||||    
T  19643894 tctctccttcagagtaggtcaaatttggaccgaacttggtaaaca 19643938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 22424882 - 22424826
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||| ||||||||||||   |||||||| ||||||||||||    
T  22424882 tggagagatcaatctctccttcagagtaggtcattgttggaccgtactgggtgaaca 22424826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 26954342 - 26954283
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||| ||||||||||| |||||||||||| ||| ||||||||    
T  26954342 tggagagatcaatctctcccccaaagtaggtcaag-ttggaccgaactaggtcaacaatct 26954283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 28137464 - 28137409
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||| ||||||||||||||| |||||||||| || |||||||    
T  28137464 tggagagatcaatctctcccccagagtaggtcaag-ttggaccgaattgtgtgaaca 28137409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 3e-84; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 25637539 - 25637731
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||||    
T  25637539 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttggtgcttttgttttcttcttccctctccttgttta 25637638  T
Q  111 tcttgtgattgt--gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25637639 tcttgtgattgtttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcctgcttgcacaatacactttgtt 25637731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 3617562 - 3617753
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||  |    
T  3617562 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--a 3617659  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3617660 tcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcg 3617753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 45283098 - 45283286
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  45283098 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatctcttggtgcttttgttttcttcttccctctccttgtttat 45283197  T
Q  112 cttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    ||||||||||||  ||||||||| |||| |||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  45283198 cttgtgattgtgtattgtgtttctcactagtttcctagattagatctaggtggtgttttgttgattattgcttgcacaa-acactttgtt 45283286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 4598579 - 4598390
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  4598579 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgttta 4598480  T
Q  111 tcttgtgattg-tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    ||||||||||| |||||  |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||  |||||||    
T  4598479 tcttgtgattgttgctt--tgtttcacacttgtttcctagattggatctaggtggtgttttattgtttcttgcttgctcaataagctttgtt 4598390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 10211507 - 10211687
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | |||||||| |||||||||||||||||||    
T  10211507 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcatcttccctctccttgttta 10211606  T
Q  111 tcttgtgattg-tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaata 192  Q
    ||||||||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  10211607 tcttgtgattgttgctt--tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaata 10211687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 54635236 - 54635412
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||  |||    
T  54635236 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccctctcctt--tta 54635333  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  54635334 tcttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcaca 54635412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 10209287 - 10209467
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||| |||| | |||||||| |||||||||||||||||||    
T  10209287 tggagagtacaaactctcctccagagtaggtcaagtttggaccaaactgggtgaccaatctctttgtgtttattgttttcatcttccctctccttgttta 10209386  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaata 192  Q
    |||||||||||| |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  10209387 tcttgtgattgttgctttgt--ttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaata 10209467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 4600800 - 4600611
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  4600800 tggagagtacaaactctcctctagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgttta 4600701  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    ||||||||||||   || |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||  |||||||    
T  4600700 tcttgtgattgttgatt-tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtttctggcttgctcaataagctttgtt 4600611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 10056331 - 10056511
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  10056331 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgttta 10056430  T
Q  111 tcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaata 192  Q
    ||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  10056431 tcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaata 10056511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 10058553 - 10058733
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  10058553 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgttta 10058652  T
Q  111 tcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaata 192  Q
    ||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  10058653 tcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaata 10058733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 10060775 - 10060955
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  10060775 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgttta 10060874  T
Q  111 tcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaata 192  Q
    ||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  10060875 tcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaata 10060955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 10062997 - 10063177
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  10062997 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgttta 10063096  T
Q  111 tcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaata 192  Q
    ||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  10063097 tcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaata 10063177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 10065219 - 10065399
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  10065219 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgttta 10065318  T
Q  111 tcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaata 192  Q
    ||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  10065319 tcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaata 10065399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 6716611 - 6716789
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||| |||  ||||    
T  6716611 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccctcccct--ttta 6716708  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgtttt-gttgtttcttgcttgcaca 189  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||    
T  6716709 tcttgtgattgtatttttgagtttcacacttgtttcctagattagatctaggtggtgttttggttgattattgcttgcaca 6716789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 801204 - 801376
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||    
T  801204 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcct--tttat 801301  T
Q  112 cttgtg-attgtgctttgtgtttcacacttgtttcctagattagatctaggtg--gtgttttgttgtttcttgcttgcaca 189  Q
    |||||| ||||     ||| |||| ||||||||||||||||||||||||||||  || |||||||| || |||||||||||    
T  801302 cttgtgtattg-----tgtttttc-cacttgtttcctagattagatctaggtgctgttttttgttgattattgcttgcaca 801376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 7780060 - 7779883
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| |||||||||||||  |||||    
T  7780060 tggagagttcaatctctcctccagagtaggtcaagtttggaccaaagtgggtgaacaatctcttggtgtctttgttttcctcttccctctcct--tttat 7779963  T
Q  112 cttgtgattgtgctttgtg-tttcacacttgtttcctagattagatctaggtggtg-ttttgttgtttcttgcttgcaca 189  Q
    |||||| |||||  ||||| |||  |||||||||||||||||||||||||||| || |||||||| || |||||||||||    
T  7779962 cttgtgcttgtgtattgtgttttttcacttgtttcctagattagatctaggtgctgtttttgttgattattgcttgcaca 7779883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 10067435 - 10067598
Alignment:
Q  29 cctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgtttatcttgtgatt--gtgct 125  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||   ||||    
T  10067435 cctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagttgct 10067534  T
Q  126 ttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaata 192  Q
    |  |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  10067535 t--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaata 10067598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 23200194 - 23200020
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||  |||||    
T  23200194 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcttcttccctctcct--tttat 23200098  T
Q  112 cttgtgattgtgctttgtgtttcaca-cttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcac 188  Q
    ||| || ||||| |||||||||  ||  ||||||||||||||||||||||||| | | |||||| || ||||||||||    
T  23200097 cttatgcttgtggtttgtgtttttcattttgtttcctagattagatctaggtgttttattgttgattattgcttgcac 23200020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 23197995 - 23197823
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||  |||||    
T  23197995 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcctcttctctctcct--tttat 23197899  T
Q  112 cttgtgattgtgctttgtgtttcaca-cttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgc 186  Q
    |||||| ||||| |||||||||  ||  ||||||||||||||||||||| ||| | | |||||| || ||||||||    
T  23197898 cttgtgcttgtggtttgtgtttttcattttgtttcctagattagatctatgtgttttattgttgattattgcttgc 23197823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 9636182 - 9636010
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||   ||| | ||| |||  |||||    
T  9636182 tggagagttcaatctctcctccaaagtaggtcaagtttgaaccgaactgggtgaacaatctcttggtgtgtttgtttctctctgctctc-cct--tttat 9636086  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    |||||| ||||| ||| || ||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  9636085 cttgtgcttgtgatttatgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 9636010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 5258200 - 5258028
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  5258200 tggagagttcaatctcttctccagagtaggtcaagtttggaccgaacttggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 5258106  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgca 187  Q
     || || ||||| |||||| ||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||||    
T  5258105 attttgcttgtggtttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgca 5258028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 19683945 - 19683774
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  19683945 tggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 19683851  T
Q  112 cttgtgattgt-gctttgtgtttcacacttgt-ttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||| || |||| | |||||||||  ||||| | ||||||||||||||||||||| |||| |||||| || |||||||    
T  19683850 cttttgcttgtggttttgtgtttttcacttttattcctagattagatctaggtgctgttattgttgattattgcttg 19683774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 45095275 - 45095445
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||   |||   |||||||  |||||    
T  45095275 tggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggcgtatttgttt--ctctattctctcct--tttat 45095369  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||| || ||||| ||||||||| || | ||| ||| ||||||||||||| ||| |||| |||||| || |||||||    
T  45095370 cttttgcttgtggtttgtgttttactctttgattcatagattagatctatgtgctgttattgttgattattgcttg 45095445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 5260379 - 5260206
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  5260379 tggagagttcaatctcttctccaaagtaggtcaagtttggaccgaacttggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 5260285  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgcac 188  Q
     || || ||||| |||||| ||  ||| ||| |||||| |||||||||||||| |||| |||||| || ||||||||||    
T  5260284 attttgcttgtggtttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattgcttgcac 5260206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 7762377 - 7762437
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7762377 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 7762437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 9581394 - 9581454
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9581394 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 9581454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 37408579 - 37408645
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  37408579 caatctctcctccagagtaggtcaagtttggatcgaactgggtgaacaatct-ttggtgtgtttgttt 37408645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 43401847 - 43401789
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  43401847 aatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtgt 43401789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 34491324 - 34491397
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  34491324 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacaatct-ttggtgtgtttgtt 34491397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 7764586 - 7764651
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||| |||||||    
T  7764586 aatctctcctccagagtaggtcaaatttagaccgaactgggtgaacaatct-ttggtgtgtttgttt 7764651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 43403790 - 43403736
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttg 76  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  43403790 aatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttg 43403736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 49199515 - 49199457
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  49199515 aatctctcctccagactaggtcatggttggaccgaactgggtgaacaatctcttggtgt 49199457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 16499141 - 16499215
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||||||||| ||| |||||||||||||||| |||||||| |||||||||||||||    
T  16499141 tggagagatcaatctctcccccagagtaggttaag-ttggaccgaactgggtcaacaatct-ttggtgtatttgttt 16499215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 40913405 - 40913472
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  40913405 tggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctcttggtgt 40913472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 4570064 - 4570120
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  4570064 tggagagatcaatctctactccagagtaggtgaagtttggaccgaactgggtcaaca 4570120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 6095655 - 6095600
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||| |||||||    
T  6095655 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgtgtgaaca 6095600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 40735495 - 40735568
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||||||| | |||||| ||||||||||||||    
T  40735495 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcagcaatct-ttggtgtatttgtt 40735568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 29196442 - 29196368
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||| | ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  29196442 tggagagatcaatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 29196368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 30236237 - 30236304
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||| ||| |||||| |||||||||    
T  30236237 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactaggtcaacaatttcttggtgt 30236304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 39153417 - 39153358
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    ||||||| ||||||||||| ||||| ||||||||| |||||| ||||||||| ||||||||    
T  39153417 tggagagaacaatctctcccccagattaggtcaag-ttggactgaactgggtcaacaatct 39153358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 44331657 - 44331716
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  44331657 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatct 44331716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 54593816 - 54593871
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||||||| |||||| ||||||| |||||||||||||    
T  54593816 tggagagatcaatctctcctccagagtatgtcaag-ttggaccaaactgggtgaaca 54593871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 41819570 - 41819523
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    ||||||||||||||||||||||||   ||||||| |||||||||||||    
T  41819570 caatctctcctccagagtaggtcattgttggaccaaactgggtgaaca 41819523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 23391955 - 23391891
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    ||||||||| ||| | ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  23391955 aatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 23391891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 32744482 - 32744418
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    ||||| ||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  32744482 aatctatcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 32744418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 9666511 - 9666448
Alignment:
Q  23 atctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||| ||||| ||||| ||||| |||||||||||||| |||||||| ||||||| |||||||    
T  9666511 atctctcccccagattaggtaaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 9666448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 760959 - 761033
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||| ||||||||| |||||| ||| ||||| |||||||| ||||||| |||||||    
T  760959 tggagagatcaatctctcccccagattaggtcaag-ttggactgaaatgggttaacaatct-ttggtgtgtttgttt 761033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 27305766 - 27305719
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactg 60  Q
    |||||||  |||||||||||||| |||||||||| ||||||||||||||    
T  27305766 tggagagatcaatctctcctccaaagtaggtcaa-tttggaccgaactg 27305719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 40734610 - 40734669
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||| | ||||||||||| |||||||||||||| ||||||||    
T  40734610 tggagagatcaatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatct 40734669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 46173469 - 46173536
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||| | | |||||| |||||||||    
T  46173469 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactagatcaacaatttcttggtgt 46173536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 47304363 - 47304430
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||  |||||||||| | ||| |||||||||||| ||||||||||||| |||||| | |||||||    
T  47304363 tggagagatcaatctctccccaagattaggtcaagttt-gaccgaactgggtcaacaatttattggtgt 47304430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 51398937 - 51398999
Alignment:
Q  23 atctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||| ||||| ||||||||| |||||||||||| ||| |||||||| ||||||| ||||||    
T  51398937 atctctcccccagattaggtcaag-ttggaccgaacttggtcaacaatct-ttggtgtgtttgtt 51398999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 55302028 - 55301972
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||| |||||||||   |||||||||||| ||||||||    
T  55302028 tggagagatcaatctctcctccatagtaggtcattgttggaccgaacttggtgaaca 55301972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 12647442 - 12647251
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||  |    
T  12647442 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--a 12647345  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12647344 tcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcg 12647251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 13656088 - 13655894
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgtat-ttgttttcttcttccctctccttgttt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||||||||||||||||||    
T  13656088 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttggtgtttgttgttttcttcttccctctccttgttt 13655989  T
Q  110 atcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  13655988 atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatatactctgttcg 13655894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 6266803 - 6266979
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt-atttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||  |||||    
T  6266803 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccctctcc--gttta 6266900  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||| |||||  ||||||||  ||||| |||||||||||||||||||||| |||||||||| || |||||| ||||    
T  6266901 tcttgtgcttgtgtattgtgtttttcacttctttcctagattagatctaggtgttgttttgttgatttttgcttacaca 6266979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 4484386 - 4484211
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||  |||||    
T  4484386 tggagagttcaatctctcctccagagtaggtcaagtttggacagaactgggtgaacaatct-ttggtgtctttgttttcttcttccctctcct--tttat 4484290  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgcac 188  Q
    |||||| ||||| ||| || ||  ||| ||||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  4484289 cttgtgcttgtggtttttgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 4484211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 30833458 - 30833633
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||||||||||  |||||    
T  30833458 tggagagttcaatctctcctccagagtaggtcaagtttggactgaactgggtgaacaatct-ttggtgtctttgttttcctcttccctctcct--tttat 30833554  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgcac 188  Q
    |||||| ||||| |||||| ||  ||| ||||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  30833555 cttgtgcttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 30833633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 32289685 - 32289853
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgtatttgttttcttcttccctctccttgtttatcttgtgat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||||  ||||||||||| |    
T  32289685 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtccttgttttcctcttccctctcct--tttatcttgtgct 32289782  T
Q  120 tgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgcac 188  Q
    |||| ||| || ||  ||| ||||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  32289783 tgtgttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 32289853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 4503189 - 4503017
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  4503189 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 4503095  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgca 187  Q
    |||||| ||||| |||||| ||  ||| ||||||||||||||||||||||||| |||| |||||| || |||||||||    
T  4503094 cttgtgcttgtgttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgca 4503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 45099866 - 45100036
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  45099866 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 45099960  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
     || || ||||| |||||| ||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  45099961 attttgcttgtgatttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 45100036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 36988132 - 36987961
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  36988132 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 36988038  T
Q  112 cttgtgattgt-gctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||| || |||| |||||||| ||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  36988037 cttttgcttgtggctttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttg 36987961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 36205721 - 36205551
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  36205721 tggagagttcaatctatcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 36205627  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
     || || ||||| ||| || ||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  36205626 attttgcttgtggtttctgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 36205551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 2334474 - 2334399
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  2334474 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggggaacaatct-ttggtgtgtttgttt 2334399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 6595062 - 6594987
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||    
T  6595062 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatct-ttggtgtgtttgttt 6594987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 5723312 - 5723237
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||    
T  5723312 tggagagatcaatctctcctctagagtaggttaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgttt 5723237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 45727041 - 45727096
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  45727041 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 45727096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 723800 - 723726
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  723800 tggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 723726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 34139826 - 34139752
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  34139826 tggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 34139752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 35446928 - 35446885
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  35446928 tctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 35446885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 17057425 - 17057352
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| ||||||    
T  17057425 tggagagatcaatctctcccccagactaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgtt 17057352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 17085408 - 17085335
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| ||||||    
T  17085408 tggagagatcaatctctcccccagactaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgtt 17085335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 1631779 - 1631735
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 66  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||    
T  1631779 caatctctcctccagagtaggtcaag-ttggaccgaactgagtgaa 1631735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 1345590 - 1345653
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    ||||||| |||||||||||||  || |||||||||||||| |||||| ||||||||| |||||||    
T  1345590 tctctcccccagagtaggtcatatt-ggaccgaactgggtcaacaatttcttggtgtgtttgttt 1345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 11151647 - 11151573
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  ||| |||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  11151647 tggagagatcaacctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 11151573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 14633881 - 14633807
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||| ||||||||| ||||||||||||| || |||||||| ||||||| |||||||    
T  14633881 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgagtcaacaatct-ttggtgtgtttgttt 14633807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 33648284 - 33648340
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||||||||||||   |||||||||||||||| ||||    
T  33648284 tggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtaaaca 33648340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 36318065 - 36317991
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  ||||||||||   ||||||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  36318065 tggagagatcaatctctcccttagagtaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 36317991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 36773674 - 36773748
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||| || |||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  36773674 tggagagatcaatctctcccccagattatgtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 36773748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 39284948 - 39285007
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  39284948 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatct 39285007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 11067426 - 11067491
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||| ||||| ||||||||| |||||||||||| ||| |||||||| ||||||| |||||||    
T  11067426 caatctctcccccagattaggtcaag-ttggaccgaactcggtcaacaatct-ttggtgtgtttgttt 11067491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 42064725 - 42064770
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaacaa 69  Q
    ||||||| ||||| |||||||| ||||||||||||||||| |||||    
T  42064725 tctctcccccagactaggtcaaatttggaccgaactgggtcaacaa 42064770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 2838079 - 2838134
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    ||||||| |||||||||||||  || |||||||||||||| |||||| |||||||||    
T  2838079 tctctcccccagagtaggtcatatt-ggaccgaactgggtcaacaatttcttggtgt 2838134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 17450690 - 17450748
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| | ||||||||||||||| |||||||||| ||||||||||||    
T  17450690 tggagagatcaatctctccac-agagtaggtcaagtt-ggaccgaactaggtgaacaatct 17450748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 24398170 - 24398238
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||  |||||||||| ||| |||||||||   |||||||||||||| ||||||||  ||||||||    
T  24398170 tggagagatcaatctctcccccatagtaggtcattgttggaccgaactggctgaacaattacttggtgt 24398238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 28259249 - 28259289
Alignment:
Q  48 ttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||||||||| |||||||| ||||||| |||||||    
T  28259249 ttggaccgaactgggtcaacaatcttttggtgtgtttgttt 28259289  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 38312352 - 38312411
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| || |||||||| |||||||||||||| ||||||||    
T  38312352 tggagagatcaatctctcccccagattatgtcaagtt-ggaccgaactgggtcaacaatct 38312411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 2660 - 2471
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| | |||||||||||||||||||||||||  |    
T  2660 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttttgtgtttattgttttcttcttccctctccttgt--a 2563  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2562 tcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtt 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 3782 - 3591
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||||||||||||  |    
T  3782 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgt--a 3685  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3684 tcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcg 3591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 6385 - 6576
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttg-ttta 110  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||||| ||||    
T  6385 tggagagtacaaactctcctccagagtaggttaagtttggaccgaactgggtgaccaatctctttgtgttattgttttcttcttccctctccttgtttta 6484  T
Q  111 tcttgtgattg-tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  6485 tcttgtgattgttgctttgtgtttcacacttgtttcctagattggatctaggtggtgtattgttgtttcttgcttgcacaataaactttgtt 6576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 8393506 - 8393692
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| | | ||    
T  8393506 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccat-tgta 8393604  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactt 197  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8393605 tcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactt 8393692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 8395715 - 8395905
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| | | ||    
T  8395715 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccat-tgta 8395813  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  8395814 tcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgttttttgcttgcacaataaactttgtt 8395905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 7125014 - 7125205
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||| |||| | ||||||||||||||||||  ||||||||    
T  7125014 tggagagtacaatctctcctccagagtaggtcaagcaaagaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgttta 7125111  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7125112 tcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcg 7125205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 7122795 - 7122986
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    ||||||||||||||||||||||| |||||||||||    |||||||||||||||||||| |||| |||| | ||||||||||||||||||  ||||||||    
T  7122795 tggagagtacaatctctcctccatagtaggtcaagcaaagaccgaactgggtgaacaatttctttgtgtttattgttttcttcttccctc--cttgttta 7122892  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgttcg 203  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7122893 tcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcg 7122986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 5136177 - 5136367
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  5136177 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgttta 5136276  T
Q  111 tcttgtgattgtgctt--tgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    ||||||| || || ||  | ||||||||||||| ||||||||||||||||| ||| ||||||||||| |||||||||| |||||  |||||||    
T  5136277 tcttgtg-ttttggttgctttgtttcacacttggttcctagattagatcta-gtgatgttttgttgtctcttgcttgctcaataagctttgtt 5136367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 5138402 - 5138592
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  5138402 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgttta 5138501  T
Q  111 tcttgtgattgtgctt--tgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    ||||||| || || ||  | ||||||||||||| ||||||||||||||||| ||| ||||||||||| |||||||||| |||||  |||||||    
T  5138502 tcttgtg-ttttggttgctttgtttcacacttggttcctagattagatcta-gtgatgttttgttgtctcttgcttgctcaataagctttgtt 5138592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 31495372 - 31495188
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctcctt------ 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||          
T  31495372 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctccttttatcc 31495273  T
Q  106 gtttatcttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
     ||||||||||| ||||| ||| || ||  ||| ||||||||||||||||||||||||| |||||||||| || |||||||||||    
T  31495272 ttttatcttgtgcttgtgttttatgcttttcactttgtttcctagattagatctaggtgctgttttgttgattattgcttgcaca 31495188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 13992349 - 13992274
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||    
T  13992349 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaacaatct-ttggtgtgtttgttt 13992274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 56178693 - 56178618
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  56178693 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgttt 56178618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 48143155 - 48143230
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  48143155 tggagagatcaatctctcctccagagtaggtcaagtttggaccaaactgggtgaacaatct-ttggtgtgtttgttt 48143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 2209836 - 2209894
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  2209836 aatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtgt 2209894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 185
Target Start/End: Complemental strand, 5370130 - 5369968
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttatcttgtgatt 120  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| |||||||   ||||  |||||||  |||||||| || ||    
T  5370130 caatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatct-ttgatgtgtttgtttatctctt--ctctcct--tttatcttttgctt 5370036  T
Q  121 gt-gctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    || | |||||| ||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  5370035 gtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 5369968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 29999862 - 29999806
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29999862 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 29999806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 52095418 - 52095344
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||    
T  52095418 tggagagatcaatctctcctccagagtagg-caagtttggaccgaactgggtgaacaat-ttttggtgtgtttgttt 52095344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 50262748 - 50262689
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  50262748 caatctttcctccagagtaggtcattgttggaccgaactgggtgaacaatctcttggtgt 50262689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 52082708 - 52082645
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||||| ||||||| |||||||    
T  52082708 tctctcctccagagtaggtcaagtttagaccgatttgggtgaacaatct-ttggtgtgtttgttt 52082645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 41964528 - 41964580
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtga 65  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  41964528 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtga 41964580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 8648251 - 8648306
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  8648251 tggagagatcaatctctcctccagagtaggtcaag-ttggaccaaactgggtgaaca 8648306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 41639538 - 41639593
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||| |||||||    
T  41639538 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgagtgaaca 41639593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 47038467 - 47038393
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| |||||||| |||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  47038467 tggagagatcaatctctcccccagagtaagtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 47038393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 48893694 - 48893620
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  48893694 tggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 48893620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 50673903 - 50673848
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||    
T  50673903 tggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactaggtgaaca 50673848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 12739606 - 12739533
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| ||||||    
T  12739606 tggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgtt 12739533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 26175692 - 26175619
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| ||||||    
T  26175692 tggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgtt 26175619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 54883141 - 54883199
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||||||||||| || |||||||| |||||||||||||| |||||| |||||||||    
T  54883141 caatctctcctccagattaagtcaagtt-ggaccgaactgggtcaacaatttcttggtgt 54883199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 379492 - 379548
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||||||||||||   |||||||||||||| ||||||    
T  379492 tggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaaca 379548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 5871941 - 5872003
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttg 85  Q
    |||||||||| ||||| |||||||||||| ||||||||||||| |||||||| ||||||| ||||    
T  5871941 caatctctcccccagattaggtcaagttt-gaccgaactgggtcaacaatct-ttggtgtgtttg 5872003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 6542235 - 6542161
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| |||| |||||||||| |||||||||||||||| ||| || ||||||||| |||||||    
T  6542235 tggagagatcaatctctcccccagggtaggtcaag-ttggaccgaactgggtaaac-atttcttggtgtgtttgttt 6542161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 6656068 - 6656123
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  6656068 tggagagatcaatctctcatccagagtaggtcaag-ttggaccgaattgggtgaaca 6656123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 26364348 - 26364415
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||  |||||||||| ||||| |||||||||||| ||| ||||||||| |||||| |||||||||    
T  26364348 tggagagatcaatctctcccccagattaggtcaagttt-gactgaactgggtcaacaatttcttggtgt 26364415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 36463445 - 36463386
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| ||||||||    
T  36463445 tggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct 36463386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 46703613 - 46703669
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||||||||||||   |||||||||| ||||||||||    
T  46703613 tggagagatcaatctctcctccagagtaggtcattgttggaccgaattgggtgaaca 46703669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 52467410 - 52467336
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| | ||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  52467410 tggagagatcaatctctccccgagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 52467336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 9927514 - 9927441
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||||| ||||||||| ||||||||||||| || |||||||| ||||||| ||||||    
T  9927514 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgagtcaacaatct-ttggtgtgtttgtt 9927441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 12743981 - 12743908
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||| | ||||||||||| |||||||||||||| |||||||| ||||||| ||||||    
T  12743981 tggagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgtt 12743908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 12745370 - 12745297
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||| | ||||||||||| |||||||||||||| |||||||| ||||||| ||||||    
T  12745370 tggagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgtt 12745297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 46147438 - 46147373
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||| ||| | ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  46147438 caatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 46147373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 24969787 - 24969851
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    ||||| ||| ||||||||||||||| |||||||||||||||| ||| || ||||||||| |||||||    
T  24969787 aatctatcccccagagtaggtcaag-ttggaccgaactgggtaaac-atttcttggtgtgtttgttt 24969851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 31474273 - 31474337
Alignment:
Q  22 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    ||||||||| ||||||||| ||||||| |||||||||||||| ||| || ||||||||| |||||||    
T  31474273 aatctctccaccagagtagatcaagtt-ggaccgaactgggtaaac-atatcttggtgtgtttgttt 31474337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 45687227 - 45687164
Alignment:
Q  23 atctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||||| | || |||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  45687227 atctctcctccatattatgtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 45687164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 5396720 - 5396775
Alignment:
Q  24 tctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    ||||||||||||| |||||||  || |||||||||||||| |||||||| |||||||    
T  5396720 tctctcctccagattaggtcatatt-ggaccgaactgggtcaacaatcttttggtgt 5396775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 5429791 - 5429850
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| ||||| ||||| |||||||||||||| ||||||||    
T  5429791 tggagagatcaatctctcccccagattaggttaagtt-ggaccgaactgggtcaacaatct 5429850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 8665520 - 8665556
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtt 48  Q
    |||||||  ||||||||||||||||||||||||||||    
T  8665520 tggagagatcaatctctcctccagagtaggtcaagtt 8665556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 12073504 - 12073560
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||| ||||||||||||||   |||||||||||| ||||||||    
T  12073504 tggagagatcaatctctcttccagagtaggtcattgttggaccgaactaggtgaaca 12073560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 12119652 - 12119719
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||  |||||||||| | |||||||||||   |||||||||||| |||||||||| |||||||||    
T  12119652 tggagagatcaatctctcc-caagagtaggtcattgttggaccgaactaggtgaacaatttcttggtgt 12119719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 27417021 - 27416962
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| ||||||||| ||||||||||||| || ||||||||    
T  27417021 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgagtcaacaatct 27416962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 2e-66; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 3439615 - 3439791
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgtatttgttttcttcttccctctccttgttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||||  |||    
T  3439615 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactggatgaacaatctctttggtgcttttgttttcttcttccctctcctt--tta 3439712  T
Q  111 tcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  3439713 tcttgtgattgtgttttgagtttctcacttgtttcctagattagatctaggtggtgttttgttgattgttgcttgcaca 3439791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 25690066 - 25690243
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgtat-ttgttttcttcttccctctccttgttt 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||  ||    
T  25690066 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtttgttgttttcttcttccctcccctt--tt 25690163  T
Q  110 atcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcaca 189  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25690164 atcttgtgagtgtgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattcttgcttgcaca 25690243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 15290636 - 15290825
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||| | |||||||||||||||||||||||||  |    
T  15290636 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgtccaatctctttgtgtttattgttttcttcttccctctccttgt--a 15290733  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||  |||||||    
T  15290734 tcttgtgattgttgctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttgcttgctcaataagctttgtt 15290825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 15471005 - 15471194
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||| | |||||||||||||||||||||||||  |    
T  15471005 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgtccaatctctttgtgtttattgttttcttcttccctctccttgt--a 15471102  T
Q  111 tcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||  |||||||    
T  15471103 tcttgtgattgttgctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttgcttgctcaataagctttgtt 15471194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 42575380 - 42575192
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgttta 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||||||||||||  |    
T  42575380 tggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgt--a 42575283  T
Q  111 tcttgtgattg--tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    ||||||| |||  ||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||  |||||||    
T  42575282 tcttgtgtttggttgctttgt--ttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaataagctttgtt 42575192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 2627848 - 2628024
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||  |||||    
T  2627848 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaataatctcttggtgtctttgttttcctcttccctctcct--tttat 2627945  T
Q  112 cttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgtt-ttgttg-tttcttgcttgcac 188  Q
    |||||| ||||| ||| || ||  |||||||||||||||||||||||||||| |||| |||||| ||| ||||||||||    
T  2627946 cttgtgcttgtgttttatgcttttcacttgtttcctagattagatctaggtgttgttattgttgattttttgcttgcac 2628024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 31218371 - 31218541
Alignment:
Q  14 gagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttatct 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||||    
T  31218371 gagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttatct 31218465  T
Q  114 tgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgca 187  Q
    |||| || || |||||| ||  ||| ||||||||||||||||||||||||| |||| |||||| || |||||||||    
T  31218466 tgtgcttatgttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgca 31218541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 17982765 - 17982935
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  17982765 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 17982859  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
     || || ||||| |||||| ||  ||| ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  17982860 attttgcttgtggtttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 17982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 42498306 - 42498459
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | ||||  |||||||  |||||    
T  42498306 tggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttccctctt--ctctcct--tttat 42498400  T
Q  112 cttgtgattgt-gctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt 168  Q
    ||| || |||| | |||||||||  ||| ||| ||||||||||||||||||||| ||||    
T  42498401 cttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgttgtt 42498459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 19945415 - 19945243
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  19945415 tggagagttcaatctctcctcgagagtaggtcaagtttgaaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 19945321  T
Q  112 cttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgca 187  Q
     || || ||||| |||||| ||  ||||| | ||||||||||||||||||||| |||| |||||| || |||||||||    
T  19945320 attttgcttgtggtttgtgcttttcacttcgattcctagattagatctaggtgctgttattgttgattattgcttgca 19945243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 34254387 - 34254217
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  34254387 tggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 34254293  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||| || ||||| |||||| ||  | | ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  34254292 cttttgcttgtggtttgtgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttg 34254217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 34256563 - 34256393
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  34256563 tggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 34256469  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||| || ||||| |||||| ||  | | ||| ||||||||||||||||||||| |||| |||||| || |||||||    
T  34256468 cttttgcttgtggtttgtgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttg 34256393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 44303967 - 44304137
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| |||||||   ||||  |||||||  |||||    
T  44303967 tggagagttcaatctctcctccagagtaggtcaagtttggatcgaactaggtgaacaatct-ttggtgtgtttgtttctctctt--ctctcct--tttat 44304061  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttg 185  Q
    ||| || ||||| |||||| ||  ||| ||| || |||||||||||||||||| |||| |||||| || |||||||    
T  44304062 cttttgcttgtggtttgtgcttttcactttgatttctagattagatctaggtgttgttattgttgattattgcttg 44304137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 1746275 - 1746200
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  1746275 tggagagttcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatc-gttggtgtgtttgttt 1746200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 42435038 - 42434992
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  42435038 caatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 42434992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 43036544 - 43036608
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||| ||||||    
T  43036544 caatctctcctccagattaggtcaag-ttggaccgaactgggtcaacaatct-ttggtgtgtttgtt 43036608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 4743270 - 4743196
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||| ||||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  4743270 tggagagatcaatctctcccccaaagtaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttt 4743196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 10930255 - 10930188
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 80  Q
    |||||||  |||||||||| ||||| ||||||||||| |||||||||||||| |||||| |||||||||    
T  10930255 tggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatttcttggtgt 10930188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 3303717 - 3303652
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||| ||| ||||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  3303717 caatctctcccccacagtaggtcaagtt-ggaccgaactgggtaaacaatct-ttggtgtgtttgttt 3303652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 15212898 - 15212971
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||||||| |||||||| ||||||| ||||||    
T  15212898 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatct-ttggtgtgtttgtt 15212971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 18655521 - 18655567
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  18655521 caatctctcctccaaagtaggtcaag-ttggaccgaactgggtgaaca 18655567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 1345424 - 1345353
Alignment:
Q  15 agagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    ||||| |||||||||| ||||||||||||||| || ||||||||| ||| |||||||| ||||||| |||||||    
T  1345424 agagttcaatctctcccccagagtaggtcaag-ttagaccgaactaggtcaacaatct-ttggtgtgtttgttt 1345353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 11384108 - 11384152
Alignment:
Q  23 atctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  11384108 atctctcctccagagtaggttaag-ttggaccgaactgggtgaaca 11384152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 4283636 - 4283691
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  4283636 tggagagatcaatctcccctctagagtaggtcaag-ttggaccgaactgggtgaaca 4283691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 33352262 - 33352321
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  33352262 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatct 33352321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 40321192 - 40321251
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  40321192 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatct 40321251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 27811399 - 27811449
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||||| ||||| ||||||||||| |||||||||||||| ||||||||    
T  27811399 caatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct 27811449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 4733829 - 4733891
Alignment:
Q  23 atctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||| ||||| ||||||||| |||||||||||||||| |||| ||| ||||||| ||||||    
T  4733829 atctctcccccagattaggtcaag-ttggaccgaactgggtcaacagtct-ttggtgtgtttgtt 4733891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 5689383 - 5689442
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| | ||||||||| |||||||||||||| ||||||||    
T  5689383 tggagagatcaatctctcccccagatttggtcaagtt-ggaccgaactgggtcaacaatct 5689442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 12702690 - 12702631
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| | ||| ||||||||||| |||||||||||||| ||||||||    
T  12702690 tggagagatcaatctctcccctagattaggtcaagtt-ggaccgaactgggtcaacaatct 12702631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 40221857 - 40221916
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||||||| || |||||    
T  40221857 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaataatct 40221916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 36 - 201
Target Start/End: Original strand, 1 - 166
Alignment:
Q  36 agtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtat-ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgttt 133  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  1 agtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgttt 98  T
Q  134 cacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacactttgtt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  99 cacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtt 166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 11217 - 11042
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||  |||||    
T  11217 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcctcttccctctcct--tttat 11121  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgcac 188  Q
    |||||| ||||| |||||||||  ||| ||||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  11120 cttgtgcttgtggtttgtgtttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 8791 - 8616
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| ||  |||||    
T  8791 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcctcttccctcttct--tttat 8695  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgcac 188  Q
    |||||| ||||| |||||| ||  ||| ||||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  8694 cttgtgcttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 8616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 11669 - 11745
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11669 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 11745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 434645 - 434798
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttat 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||   ||||| ||| |||  |||||    
T  434645 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatat-ttggtgtgtttgtttctctcttctctc-cct--tttat 434740  T
Q  112 cttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt 168  Q
    |||||| ||||| |||||| ||  ||| ||| ||||||||||||||||||||| ||||    
T  434741 cttgtgcttgtgttttgtgcttttcactttgattcctagattagatctaggtgctgtt 434798  T

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Target: scaffold1519 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 1027 - 1200
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttct-tcttccctctccttgttta 110  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| ||||  |||||||  ||||    
T  1027 tggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgttttgtttctctctt--ctctcct--ttta 1121  T
Q  111 tcttgtgattgtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttcttgcttgca 187  Q
    |  | || ||||| |||||| ||  ||| ||| | |||||||||||||||||||||||| |||||| || |||||||||    
T  1122 tactttgcttgtggtttgtgcttttcactttgatacctagattagatctaggtggtgttattgttgattattgcttgca 1200  T

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Target: scaffold0176 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 18060 - 18004
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||  ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  18060 tggagagatcaatctctcctccagggtaggtcaagtttggatcgaactgggtgaaca 18004  T

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Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 114714 - 114774
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 72  Q
    |||||||  |||||||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  114714 tggagagatcaatctctcctccagagtaggttaagtttagaccgaactggatgaacaatct 114774  T

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Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 149153 - 149079
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||  |||||||||| ||||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||    
T  149153 tggagagatcaatctctcccccagagtaggttaagtt-ggaccgaactgggtcaacaatct-ttggtgtatttgttt 149079  T

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Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 10610 - 10656
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  10610 caatctctcctccagagtaggtcaag-ttggaccgaactgggtaaaca 10656  T

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Target: scaffold0466 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 7448 - 7494
Alignment:
Q  21 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 68  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  7448 caatctctcctctagagtaggttaagtt-ggaccgaactgggtgaaca 7494  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 20471 - 20398
Alignment:
Q  12 tggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtt 87  Q
    |||||||  |||||||||| ||||| ||||||||| |||||||||||||||| |||||| | ||||||| ||||||    
T  20471 tggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaat-ttttggtgtgtttgtt 20398  T

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Target: scaffold0140 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 8491 - 8531
Alignment:
Q  48 ttggaccgaactgggtgaacaatctcttggtgtatttgttt 88  Q
    |||||||||||||||| |||||||| ||||||| |||||||    
T  8491 ttggaccgaactgggtcaacaatcttttggtgtgtttgttt 8531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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