View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9696_low_8 (Length: 327)
Name: NF9696_low_8
Description: NF9696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9696_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 18 - 317
Target Start/End: Complemental strand, 14957023 - 14956724
Alignment:
| Q |
18 |
gatcaatcattgtacctccatcactatgaatatttccacggcgatgttcctcaatgagtccctccaaaaatgcatcagatctttttgcaatcctcttgca |
117 |
Q |
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| T |
14957023 |
gatcaatcattgtacctccatcactatgaatatttccacggcgatgttcctcaatgagtccctccaaaaatgcattagatctttttgcaatcctcttgca |
14956924 |
T |
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| Q |
118 |
ccttttctccaaattatcaagatcaaacaaccttaacaaaggcaaaaaatcacccttattattagcacctaacaaagacatcatctcacttattatctcc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14956923 |
ccttttctccaaattatcaagatcaaacaaccttaacaaaggcaaaaaatcacccttattattagcacctaacaaagacatcatctcacttattatctcc |
14956824 |
T |
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| Q |
218 |
ctaaattgtttagcttcttcaacatctgacacatctccgtcatctccataataccgttttcccgatatcattctcatcatagcattaaacgtcatctctg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14956823 |
ctaaattgtttagcttcttcaacatctgacacatctccgtcatctccataataccgttttcccgatatcattctcatcatagcattaaacgtcatctctg |
14956724 |
T |
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