View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9697_high_5 (Length: 311)
Name: NF9697_high_5
Description: NF9697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9697_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 7 - 274
Target Start/End: Original strand, 16912786 - 16913053
Alignment:
| Q |
7 |
taaaattagaacaatagtagcactaataacacttattctaatactctattttcaacactcaatctcttaataatatcaaatttacgtgaatctaatcgca |
106 |
Q |
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| T |
16912786 |
taaaattagaataatagtagcactaataacacttattctaatactctattttcaacactcaatctcttaataatatcaaatttacgtgaatctaatcgca |
16912885 |
T |
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| Q |
107 |
ttatgtgggacacatttttaaaatggcgagacttatgtgtattatattcaatataaaaaataagtgttgaaaatagggtgttagatcgagaattatatta |
206 |
Q |
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| T |
16912886 |
ttatgtgcgacatatttttaaaatggcgagacttatgtgtattatattcagtaaaaaaaataagtgttgaaaatagggtgttagatcgagaattatatta |
16912985 |
T |
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| Q |
207 |
ttatttcttcaaaattaatctctcagatttgtttttaacttaattgttttagtgctcacaacatagta |
274 |
Q |
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| T |
16912986 |
ttatttcttcaaaattaatctctcagatttgtttttaacttaattgttttagtgctcacaacatagta |
16913053 |
T |
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