View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9697_low_10 (Length: 243)
Name: NF9697_low_10
Description: NF9697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9697_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 26454802 - 26454590
Alignment:
| Q |
18 |
atgtgataatcccaagaatgagaaatgcaacatggtgaacgttgatgatgaaagtattgacataatgataattgatggtgaagaagaa---ataatccaa |
114 |
Q |
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| T |
26454802 |
atgtgataatcccaagaatgagaaatgcaacatggtgaacgttgatgatgaaagtattgacataatgataattgatggtgaagaagaagaaataatccaa |
26454703 |
T |
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| Q |
115 |
aatgatgaaaacatatgaagacaagagatgtggtcgtgatgataatcaatcatagtattttttagcataatttaggagacattttagagtgtttctagca |
214 |
Q |
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| T |
26454702 |
aatgatgacaacatatgaagacaagagatgtggtcgtgatgataatcaatcatagtattttttagcataatttaggagacattttagagtgtttctagca |
26454603 |
T |
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| Q |
215 |
agttataattcat |
227 |
Q |
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| T |
26454602 |
agttataattcat |
26454590 |
T |
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