View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9698_1 (Length: 1160)
Name: NF9698_1
Description: NF9698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9698_1 |
 | |
|
| [»] scaffold1738 (1 HSPs) |
| | |
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Alignment Details
Target: chr2 (Bit Score: 465; Significance: 0; HSPs: 37)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 465; E-Value: 0
Query Start/End: Original strand, 613 - 1137
Target Start/End: Original strand, 8412200 - 8412724
Alignment:
| Q |
613 |
aggccaccaattagcaggctcaaattttgcagggtatttttcaagcattgctcctaataatggaagtggatatgctttgtcaagggccaaaaccttttcc |
712 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||| || |||||||| |||| ||||||||||||||| |
|
|
| T |
8412200 |
aggccaccaattagcaggttcaaattttgaagggtatttttcaagcattgctcccaataaaggaagagggtatgctttatcaattgccaaaaccttttcc |
8412299 |
T |
|
| Q |
713 |
attgcatctttgacatcttcctcggtaggatttccaatagcaattgtagttttgatatgactttgaagttgcttgaacaaccttgttgcattcctttgtt |
812 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
8412300 |
attgcatctttgacatcttcctcggtaggatttccaatagcaattgtagttttgatatgactttgaagttgcttgaacaatcttgtagcatttctttgtt |
8412399 |
T |
|
| Q |
813 |
cctctgtgagttgagagggttggattttgttcatgataagcaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagtgg |
912 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8412400 |
cctctgtgagttgagagggttggattttgttcatgataaacaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagtgg |
8412499 |
T |
|
| Q |
913 |
tgcaccttccccgcttgtgacagctgcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgtta |
1012 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8412500 |
tgcaccttccccgtttgtgacagctgcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgtta |
8412599 |
T |
|
| Q |
1013 |
cgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaagactgcatagagttgaactgtagcattagaaattgtacaatgctttt |
1112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
8412600 |
cgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaagactgcatagagttgaactgtagcattagaaattgtagaatgctttt |
8412699 |
T |
|
| Q |
1113 |
gttgttgatcttgtaatatttgtgt |
1137 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
8412700 |
gttgttgatcttgtaatatttgtgt |
8412724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 465; E-Value: 0
Query Start/End: Original strand, 613 - 1137
Target Start/End: Original strand, 8434298 - 8434822
Alignment:
| Q |
613 |
aggccaccaattagcaggctcaaattttgcagggtatttttcaagcattgctcctaataatggaagtggatatgctttgtcaagggccaaaaccttttcc |
712 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||| || |||||||| |||| ||||||||||||||| |
|
|
| T |
8434298 |
aggccaccaattagcaggttcaaattttgaagggtatttttcaagcattgctcccaataaaggaagagggtatgctttatcaattgccaaaaccttttcc |
8434397 |
T |
|
| Q |
713 |
attgcatctttgacatcttcctcggtaggatttccaatagcaattgtagttttgatatgactttgaagttgcttgaacaaccttgttgcattcctttgtt |
812 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
8434398 |
attgcatctttgacatcttcctcggtaggatttccaatagcaattgtagttttgatatgactttgaagttgcttgaacaatcttgtagcatttctttgtt |
8434497 |
T |
|
| Q |
813 |
cctctgtgagttgagagggttggattttgttcatgataagcaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagtgg |
912 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8434498 |
cctctgtgagttgagagggttggattttgttcatgataaacaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagtgg |
8434597 |
T |
|
| Q |
913 |
tgcaccttccccgcttgtgacagctgcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgtta |
1012 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8434598 |
tgcaccttccccgtttgtgacagctgcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgtta |
8434697 |
T |
|
| Q |
1013 |
cgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaagactgcatagagttgaactgtagcattagaaattgtacaatgctttt |
1112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
8434698 |
cgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaagactgcatagagttgaactgtagcattagaaattgtagaatgctttt |
8434797 |
T |
|
| Q |
1113 |
gttgttgatcttgtaatatttgtgt |
1137 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
8434798 |
gttgttgatcttgtaatatttgtgt |
8434822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 1 - 560
Target Start/End: Original strand, 8405475 - 8406034
Alignment:
| Q |
1 |
cttacaaagaatgaaagaataacacattaaaaaatgaattgaatgatttatatgtcttagaatattttgctggcaaattcatctatgtcaacaccttcca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8405475 |
cttacaaagaatgaaagaataacacattaaaaaatgaattaaataatttatatgtcttagaatattttgcttgcaaattcatctatgtcaacaccttcca |
8405574 |
T |
|
| Q |
101 |
ttcgataagcagctgattttgatgcaagttctctcagctctgatacacttcttcccaactgcaaagccattttcatttcaaatagctctccattttctct |
200 |
Q |
| |
|
| ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8405575 |
tgcgataagaagctgattttgatgcaagttccctcagctcagatacacttcttcccaattgcaaagccattttcatttcaaatagctctccattttctct |
8405674 |
T |
|
| Q |
201 |
tttctctaaatctttctctcccaaagttgattcaatcgaagtttctaacaagttgaagaaaccagaagaagttttatacatttcaaaaaccatgccaact |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||| |
|
|
| T |
8405675 |
tttctctaaatctttctctcccaaagttgattcaattgaagtttctaacaagttgaaaaaaccagcagaagctctatacatttcaaaaaccatgccaact |
8405774 |
T |
|
| Q |
301 |
tgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagccaagagaggaacaaatgcagccaaagaactaccattaccaataaatgtagatc |
400 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
8405775 |
tgtccaccatgttcaaaagtattgattgcagaagccaatgaaccagccaagagaggaacaaatgcagccaaagaactaccattgccaataaatgtagatc |
8405874 |
T |
|
| Q |
401 |
caatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgctatgtttccaagtctgtcataatcttcaacatcttt |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
8405875 |
caatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttaccttcaaagctatgtttccaagtctgtcataatcttcagcgtcttt |
8405974 |
T |
|
| Q |
501 |
tctctttatcacttcaacaacttccctcatttccatttctaattcttcactccatccatt |
560 |
Q |
| |
|
|| |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8405975 |
tcgttttaccacgtcaacaacttccctcatttccatttccaattcttcactccatccatt |
8406034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 3 - 560
Target Start/End: Complemental strand, 8396095 - 8395538
Alignment:
| Q |
3 |
tacaaagaatgaaagaataacacattaaaaaatgaattgaatgatttatatgtcttagaatattttgctggcaaattcatctatgtcaacaccttccatt |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8396095 |
tacaaagaatgaaagaataacacattaaaaaatgaattaaataatttatatgtcttagaatattttgcttgcaaattcatctatgtcaacaccttccatg |
8395996 |
T |
|
| Q |
103 |
cgataagcagctgattttgatgcaagttctctcagctctgatacacttcttcccaactgcaaagccattttcatttcaaatagctctccattttctcttt |
202 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8395995 |
cgataagaagctgattttgatgcaagttccctcagctctgatacacttcttcccaattgcaaagccattttcatttcaaatagctctccattttctcttt |
8395896 |
T |
|
| Q |
203 |
tctctaaatctttctctcccaaagttgattcaatcgaagtttctaacaagttgaagaaaccagaagaagttttatacatttcaaaaaccatgccaacttg |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||| ||||| | |||||||||||||||||||||||| ||| |
|
|
| T |
8395895 |
tctctaaatctttctctcccaaagttgattcaattgaagtttctatcaagttgaataaaccatcagaagctctatacatttcaaaaaccatgccaatttg |
8395796 |
T |
|
| Q |
303 |
tccaccatgctcaaaagtattaacagcagaagccaatgaaccagccaagagaggaacaaatgcagccaaagaactaccattaccaataaatgtagatcca |
402 |
Q |
| |
|
||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
8395795 |
tccaccatgttcaaaagtatttattgcagaagccaatgaaccagccaagagaggaacaaatgcagccaaagaactaccattgccaataaatgtagatcca |
8395696 |
T |
|
| Q |
403 |
atagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgctatgtttccaagtctgtcataatcttcaacatcttttc |
502 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
8395695 |
atagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttaccttcaaagctatgtttccaagtctgtcataatcttcagcgtcttttc |
8395596 |
T |
|
| Q |
503 |
tctttatcacttcaacaacttccctcatttccatttctaattcttcactccatccatt |
560 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8395595 |
gttttaccacgtcaacaacttccctcatttccatttccaattcttcactccatccatt |
8395538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 611 - 1093
Target Start/End: Original strand, 8406078 - 8406560
Alignment:
| Q |
611 |
gaaggccaccaattagcaggctcaaattttgcagggtatttttcaagcattgctcctaataatggaagtggatatgctttgtcaagggccaaaacctttt |
710 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8406078 |
gaaggccaccaagtagcaggctcaaattttgcagggtatttttcaagcattgctcctaataatggaagtggatatgctttgtcaagggccaaaacttttt |
8406177 |
T |
|
| Q |
711 |
ccattgcatctttgacatcttcctcggtaggatttccaatagcaattgtagttttgatatgactttgaagttgcttgaacaaccttgttgcattcctttg |
810 |
Q |
| |
|
|||||||| | || ||||||||||| |||||||||||| ||| |||||||||| |||| ||||||||||| |||||||| ||||| ||||| ||||| |
|
|
| T |
8406178 |
ccattgcacccttaacatcttcctcactaggatttccaagagctattgtagtttgaatattgctttgaagttgtttgaacaatcttgtagcatttctttg |
8406277 |
T |
|
| Q |
811 |
ttcctctgtgagttgagagggttggattttgttcatgataagcaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagt |
910 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8406278 |
ttcctctgtgagttgagagggttggattttgttcatgataagcaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagt |
8406377 |
T |
|
| Q |
911 |
ggtgcaccttccccgcttgtgacagctgcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgt |
1010 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8406378 |
ggtgcaccttccccgtttgtgacagctgcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgt |
8406477 |
T |
|
| Q |
1011 |
tacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaagactgcatagagttgaactgtagcatta |
1093 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8406478 |
tacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaagactgcatagagttgaactgtagcatta |
8406560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 611 - 1093
Target Start/End: Complemental strand, 8395494 - 8395012
Alignment:
| Q |
611 |
gaaggccaccaattagcaggctcaaattttgcagggtatttttcaagcattgctcctaataatggaagtggatatgctttgtcaagggccaaaacctttt |
710 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8395494 |
gaaggccaccaagtagcaggctcaaattttgcagggtatttttcaagcattgctcctaataatggaagtggatatgctttgtcaagggccaaaacttttt |
8395395 |
T |
|
| Q |
711 |
ccattgcatctttgacatcttcctcggtaggatttccaatagcaattgtagttttgatatgactttgaagttgcttgaacaaccttgttgcattcctttg |
810 |
Q |
| |
|
|||||||| | || ||||||||||| |||||||||||| ||| |||||||||| |||| ||||||||||| |||||||| ||||| ||||| ||||| |
|
|
| T |
8395394 |
ccattgcacccttaacatcttcctcactaggatttccaagagctattgtagtttgaatattgctttgaagttgtttgaacaatcttgtagcatttctttg |
8395295 |
T |
|
| Q |
811 |
ttcctctgtgagttgagagggttggattttgttcatgataagcaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagt |
910 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8395294 |
ttcctctgtgagttgagagggttggattttgttcatgataatcaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagt |
8395195 |
T |
|
| Q |
911 |
ggtgcaccttccccgcttgtgacagctgcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgt |
1010 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8395194 |
ggtgcaccttccccgtttgtgacagctgcaactccagacatggttgtagcagtgagagtaatcatttttattgagtttaatagaagattattccagttgt |
8395095 |
T |
|
| Q |
1011 |
tacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaagactgcatagagttgaactgtagcatta |
1093 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8395094 |
tacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaagactgcatagagttgaactgtagcatta |
8395012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 67 - 560
Target Start/End: Complemental strand, 8376345 - 8375855
Alignment:
| Q |
67 |
ttgctggcaaattcatctatgtcaacaccttccattcgataagcagctgattttgatgcaagttctctcagctctgatacacttcttcccaactgcaaag |
166 |
Q |
| |
|
||||||||||||||||| || || | ||||||||| ||| ||| |||||||||||| |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
8376345 |
ttgctggcaaattcatcaatttcgataccttccatgcgacaagaagctgattttgaggcaagttccctcagctctgatacacttcttcccaattgcaaag |
8376246 |
T |
|
| Q |
167 |
ccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaatcgaagtttctaacaagttgaagaaaccaga |
266 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |
|
|
| T |
8376245 |
ccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgaatcaattgaagtttctatcaagttgaagaaaccacc |
8376146 |
T |
|
| Q |
267 |
agaagttttatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagccaagagaggaacaaatgca |
366 |
Q |
| |
|
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
8376145 |
agaagctctatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaattacagaagccaatgaaccagccaaaagaggaacaaaagca |
8376046 |
T |
|
| Q |
367 |
gccaaagaactaccattaccaataaatgtagatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgcta |
466 |
Q |
| |
|
|||||||| |||| |||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
8376045 |
gccaaaga---accactacctacaaatgtcgatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttaccttcaatgcta |
8375949 |
T |
|
| Q |
467 |
tgtttccaagtctgtcataatcttcaacatcttttctctttatcacttcaacaacttccctcatttccatttctaattcttcactccatccatt |
560 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |
|
|
| T |
8375948 |
tgtttccaagtctgtcataatcttcagcgtcttttctctttatcacttcaacaacttccctcatttccatttccaattctttactccacccatt |
8375855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 67 - 560
Target Start/End: Original strand, 8411661 - 8412151
Alignment:
| Q |
67 |
ttgctggcaaattcatctatgtcaacaccttccattcgataagcagctgattttgatgcaagttctctcagctctgatacacttcttcccaactgcaaag |
166 |
Q |
| |
|
|||||||||||||||||||| || | || |||||| ||| ||| |||||||||||| |||||||| |||||||||| |||||||||||||| |||||| |
|
|
| T |
8411661 |
ttgctggcaaattcatctatttcgatactttccatgcgacaagaagctgattttgaggcaagttccctcagctctgtgacacttcttcccaatcgcaaag |
8411760 |
T |
|
| Q |
167 |
ccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaatcgaagtttctaacaagttgaagaaaccaga |
266 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
8411761 |
ccattttcaattcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaattgaagtttctaacaagttgaaaaaaccagc |
8411860 |
T |
|
| Q |
267 |
agaagttttatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagccaagagaggaacaaatgca |
366 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
8411861 |
agaagctctatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagtcaatagaggaacaaatgca |
8411960 |
T |
|
| Q |
367 |
gccaaagaactaccattaccaataaatgtagatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgcta |
466 |
Q |
| |
|
||||||||||| ||| || | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
8411961 |
gccaaagaact---attgcctacaaatgtagatccaattgctgcaattcctgtgagtaatggccctgcaattgccaaactcttgtttaccttcaacgcta |
8412057 |
T |
|
| Q |
467 |
tgtttccaagtctgtcataatcttcaacatcttttctctttatcacttcaacaacttccctcatttccatttctaattcttcactccatccatt |
560 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| ||||||||| | |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
8412058 |
tgtttccaagtctgtcataatcttcagaatcttttctcttgatcacttcagcgacttcctgcatttccatttctaattcttcactccatccatt |
8412151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 67 - 560
Target Start/End: Original strand, 8433759 - 8434249
Alignment:
| Q |
67 |
ttgctggcaaattcatctatgtcaacaccttccattcgataagcagctgattttgatgcaagttctctcagctctgatacacttcttcccaactgcaaag |
166 |
Q |
| |
|
|||||||||||||||||||| || | || |||||| ||| ||| |||||||||||| |||||||| |||||||||| |||||||||||||| |||||| |
|
|
| T |
8433759 |
ttgctggcaaattcatctatttcgatactttccatgcgacaagaagctgattttgaggcaagttccctcagctctgtgacacttcttcccaatcgcaaag |
8433858 |
T |
|
| Q |
167 |
ccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaatcgaagtttctaacaagttgaagaaaccaga |
266 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
8433859 |
ccattttcaattcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaattgaagtttctaacaagttgaaaaaaccagc |
8433958 |
T |
|
| Q |
267 |
agaagttttatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagccaagagaggaacaaatgca |
366 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
8433959 |
agaagctctatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagtcaatagaggaacaaatgca |
8434058 |
T |
|
| Q |
367 |
gccaaagaactaccattaccaataaatgtagatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgcta |
466 |
Q |
| |
|
||||||||||| ||| || | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
8434059 |
gccaaagaact---attgcctacaaatgtagatccaattgctgcaattcctgtgagtaatggccctgcaattgccaaactcttgtttaccttcaacgcta |
8434155 |
T |
|
| Q |
467 |
tgtttccaagtctgtcataatcttcaacatcttttctctttatcacttcaacaacttccctcatttccatttctaattcttcactccatccatt |
560 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| ||||||||| | |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
8434156 |
tgtttccaagtctgtcataatcttcagaatcttttctcttgatcacttcagcgacttcctgcatttccatttctaattcttcactccatccatt |
8434249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 51 - 555
Target Start/End: Original strand, 8430796 - 8431285
Alignment:
| Q |
51 |
tatgtcttagaatattttgctggcaaattcatctatgtcaacaccttccattcgataagcagctgattttgatgcaagttctctcagctctgatacactt |
150 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
8430796 |
tatgtcttagaaaattttgctggaaaattcatctatgtcaacaccttccatgcgataagaagctgattttgatgcaagttcccttagctctgatacactt |
8430895 |
T |
|
| Q |
151 |
cttcccaactgcaaagccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaatcgaagtttctaaca |
250 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
8430896 |
tttcccaattgcaaagccatcttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaattgaagtttctatca |
8430995 |
T |
|
| Q |
251 |
agttgaagaaaccagaagaagttttatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagccaa |
350 |
Q |
| |
|
||||||| ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
8430996 |
agttgaaaaaaccagcagaagctctatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaattacagaagccaat----------- |
8431084 |
T |
|
| Q |
351 |
gagaggaacaaatgcagccaaagaactaccattaccaataaatgtagatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttg |
450 |
Q |
| |
|
||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
8431085 |
-agaggaacaaaagcagccaaagaact---attgccaataaatgtagatcctatagctgcaattcctgagagtaatggccctgcaattgccaaactcttg |
8431180 |
T |
|
| Q |
451 |
tttatcttcaacgctatgtttccaagtctgtcataatcttcaacatcttttctctttatcacttcaacaacttccctcatttccatttctaattcttcac |
550 |
Q |
| |
|
|||| |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8431181 |
tttaccttcaatgctatgtttccaagtctatcataatcttcaacgtcttttctctttatcacttcaacaacatccctcatttccatttctaattcttcac |
8431280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 67 - 525
Target Start/End: Original strand, 8416745 - 8417197
Alignment:
| Q |
67 |
ttgctggcaaattcatctatgtcaacaccttccattcgataagcagctgattttgatgcaagttctctcagctctgatacacttcttcccaactgcaaag |
166 |
Q |
| |
|
||||||| |||||||||||||||||||||||| || ||| ||| ||||||||||| ||| |||| ||||||||||||||| |||||||||| ||||||| |
|
|
| T |
8416745 |
ttgctggaaaattcatctatgtcaacaccttcgatgcgacaagaagctgattttgtggcacgttccctcagctctgatacatttcttcccaattgcaaag |
8416844 |
T |
|
| Q |
167 |
ccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaatcgaagtttctaacaagttgaagaaaccaga |
266 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
8416845 |
ccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaattgaagtttctaacaagttgaa-aaaccacc |
8416943 |
T |
|
| Q |
267 |
agaagttttatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagccaagagaggaacaaatgca |
366 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
8416944 |
agaag--ctctacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaactgcagaagccaatgaaccagccaatagaggaacaaaggca |
8417041 |
T |
|
| Q |
367 |
gccaaagaactaccattaccaataaatgtagatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgcta |
466 |
Q |
| |
|
|||||||| ||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| || |||||| |||| |
|
|
| T |
8417042 |
gccaaaga---gccattgcctataaatgtagatccaatagcggcaattcctgtgagtaatggccctgcaattgctaaactcttgtctaccttcaaagcta |
8417138 |
T |
|
| Q |
467 |
tgtttccaagtctgtcataatcttcaacatcttttctctttatcacttcaacaacttcc |
525 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8417139 |
tgtttccaagcctgttataatcttcagcatcttttctctttatcacttcaacaacttcc |
8417197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 274; E-Value: 1e-152
Query Start/End: Original strand, 852 - 1137
Target Start/End: Complemental strand, 8395010 - 8394725
Alignment:
| Q |
852 |
gcaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgcttgtgacagctgcaacaccagacat |
951 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8395010 |
gcaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgtttgtgacagctgcaacaccagacat |
8394911 |
T |
|
| Q |
952 |
ggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtct |
1051 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8394910 |
ggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtct |
8394811 |
T |
|
| Q |
1052 |
gatacagcttccaagactgcatagagttgaactgtagcattagaaattgtacaatgcttttgttgttgatcttgtaatatttgtgt |
1137 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8394810 |
gatacagcttccaagactgcatagagttgaactgtagcattagaatttgtagaatgcttttgttgttgatcttgtaatatttgtgt |
8394725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 738 - 1148
Target Start/End: Original strand, 8431353 - 8431758
Alignment:
| Q |
738 |
taggatttccaatagcaattgtagttttgatatgactttgaagttgcttgaacaaccttgttgcattcctttgttcctctgtgagttgagagggttggat |
837 |
Q |
| |
|
|||||||||||| |||||||||||||| || || |||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
8431353 |
taggatttccaagagcaattgtagtttgaatttgcctttgaagttacttgaacaatcttgtggcattcctttgttcttctgtgagttgagagggttggat |
8431452 |
T |
|
| Q |
838 |
tttgttcatgataagcaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgcttgtgacagct |
937 |
Q |
| |
|
|||||||||||||||||| ||||| |||| || || || | |||||||| || ||||||| ||||| |||||||||| ||||||| |||||||||||| |
|
|
| T |
8431453 |
tttgttcatgataagcaacaatccgttggctgccgaaaacaggagagcagaagatagtttcagagccaaaagtggtgcaacttccccacttgtgacagct |
8431552 |
T |
|
| Q |
938 |
gcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgca |
1037 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8431553 |
gcaacaccagacatagtcttagcagtgagagtaatcatgtttattgagttcaaaagaagattattccagttgttac---gttcgccaatgttgtgatgca |
8431649 |
T |
|
| Q |
1038 |
tttctattctgtctgatacagcttccaagactgcatagagttgaactgtagcattagaaattgtacaatgcttttgttgttgatcttgtaatatttgtgt |
1137 |
Q |
| |
|
||||||||||||||||||||||||| || |||| |||||||||| ||| || |||||| ||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
8431650 |
tttctattctgtctgatacagcttctaaaactg--tagagttgaattgtggctttagaatttgtagaatgcttttgttgttgatcttgtaatatttctgt |
8431747 |
T |
|
| Q |
1138 |
tttgatgatgt |
1148 |
Q |
| |
|
|||| |||||| |
|
|
| T |
8431748 |
tttgttgatgt |
8431758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 613 - 888
Target Start/End: Complemental strand, 8375806 - 8375531
Alignment:
| Q |
613 |
aggccaccaattagcaggctcaaattttgcagggtatttttcaagcattgctcctaataatggaagtggatatgctttgtcaagggccaaaaccttttcc |
712 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||| || |||||||| |||| ||||||||||||||| |
|
|
| T |
8375806 |
aggccaccaattagcaggttcaaattttgaagggtatttttcaagcattgctcccaataaaggaagagggtatgctttatcaattgccaaaaccttttcc |
8375707 |
T |
|
| Q |
713 |
attgcatctttgacatcttcctcggtaggatttccaatagcaattgtagttttgatatgactttgaagttgcttgaacaaccttgttgcattcctttgtt |
812 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
8375706 |
attgcatctttgacatcttcctcggtaggatttccaatagcaattgtagttttgatatgactttgaagttgcttgaacaatcttgtagcatttctttgtt |
8375607 |
T |
|
| Q |
813 |
cctctgtgagttgagagggttggattttgttcatgataagcaataatccagtggcagcagagaataaaagagcaga |
888 |
Q |
| |
|
|||| | | |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
8375606 |
cctcggccaattgagaaggttggattttgttcatgataagcaacaatccagtggctgcagagaataaaagagcaga |
8375531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 613 - 888
Target Start/End: Original strand, 8439297 - 8439572
Alignment:
| Q |
613 |
aggccaccaattagcaggctcaaattttgcagggtatttttcaagcattgctcctaataatggaagtggatatgctttgtcaagggccaaaaccttttcc |
712 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||| || |||||||| ||||| ||||||||||||||| |
|
|
| T |
8439297 |
aggccaccaattagcaggttcaaattttgaagggtatttttcaagcattgctcccaataaaggaagagggtatgctttatcaagtgccaaaaccttttcc |
8439396 |
T |
|
| Q |
713 |
attgcatctttgacatcttcctcggtaggatttccaatagcaattgtagttttgatatgactttgaagttgcttgaacaaccttgttgcattcctttgtt |
812 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||| ||||||||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
8439397 |
attgcatctttgacatcttcctcggtaggatttcctatagcaattttagtttggatttgactttgaagttgcttgaacaatcttgtagcatttctttgtt |
8439496 |
T |
|
| Q |
813 |
cctctgtgagttgagagggttggattttgttcatgataagcaataatccagtggcagcagagaataaaagagcaga |
888 |
Q |
| |
|
|||| | | |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
8439497 |
cctcggccaattgagaaggttggattttgttcatgataagcaacaatccagtggctgcagagaataaaagagcaga |
8439572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 142; E-Value: 6e-74
Query Start/End: Original strand, 611 - 1074
Target Start/End: Original strand, 8417413 - 8417882
Alignment:
| Q |
611 |
gaaggccaccaattagcaggctcaaattttgcagggtatttttcaagcattgctcctaataatggaagtggatatgctttgtcaagggccaaaacctttt |
710 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||| |||||||| | |||||| ||| | |||||||| |||| |
|
|
| T |
8417413 |
gaaggccaccaattagcaggaacaaatttagcagggtaattttcaagcattgctcccaataaaggaagtgggtgtgctttatcatgtgccaaaacttttt |
8417512 |
T |
|
| Q |
711 |
ccattgcatctttgacatcttcctcggtaggatttccaatagcaattgtagttttgatatgactttgaagttgcttgaacaaccttgttgcattcctttg |
810 |
Q |
| |
|
| || || |||||||||||||| | |||| |||||||| ||||||| | |||| ||| ||||||||||||||||||||||| ||||| | || | ||| |
|
|
| T |
8417513 |
caatagcttctttgacatcttctttagtagaatttccaagagcaatttttgtttggatttgactttgaagttgcttgaacaatcttgtagtgtttcattg |
8417612 |
T |
|
| Q |
811 |
ttcctctgtgagttgagagggttggattttgttcatgataagcaataatccagtggcagcagagaataaaagagcagaggacagtttcatagccataagt |
910 |
Q |
| |
|
||||| | | |||||| |||||||||||||||||||||||||| ||||| ||||| ||||| || ||||||||||| || | |||| ||||| |||| |
|
|
| T |
8417613 |
ctcctcggccaattgagaaggttggattttgttcatgataagcaacaatccggtggctgcagaaaacaaaagagcagaagataacttcaaagccaaaagt |
8417712 |
T |
|
| Q |
911 |
ggtgcaccttccccgcttgtg---ac---agctgcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattcc |
1004 |
Q |
| |
|
| || | || | | ||| || ||| |||| ||||||||||||||||||||||||||||||||| || || || || || |||||| | |||| |
|
|
| T |
8417713 |
gatgaatctgagcaagtagtgggaacagtagcagcaagaccagacatggttgtagcagtgagagtaatcatgttgatggaattcaagagaagagtgttcc |
8417812 |
T |
|
| Q |
1005 |
agttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaagactgcata |
1074 |
Q |
| |
|
| ||||||||| |||| | |||||||||||||||||| |||||||| || ||| |||||||||||||||| |
|
|
| T |
8417813 |
aattgttacgtagttcacaaatgttgtgatgcatttcaattctgtcagaaacaacttccaagactgcata |
8417882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 397 - 560
Target Start/End: Original strand, 8439085 - 8439248
Alignment:
| Q |
397 |
gatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgctatgtttccaagtctgtcataatcttcaacat |
496 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | | |
|
|
| T |
8439085 |
gatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttaccttcaatgctatgtttccaagtctgtcataatcttcagcgt |
8439184 |
T |
|
| Q |
497 |
cttttctctttatcacttcaacaacttccctcatttccatttctaattcttcactccatccatt |
560 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |
|
|
| T |
8439185 |
cttttctctttatcacttcaacaacttccctcatttccatttccaattctttactccacccatt |
8439248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 392 - 557
Target Start/End: Original strand, 8417201 - 8417366
Alignment:
| Q |
392 |
atgtagatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgctatgtttccaagtctgtcataatcttc |
491 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
8417201 |
atgtagatccaattgctgcaattcctgtgagtaatggccctgcaattgccaaactcttgtttaccttcaacgctatgtttccaagtctgtcataatcttc |
8417300 |
T |
|
| Q |
492 |
aacatcttttctctttatcacttcaacaacttccctcatttccatttctaattcttcactccatcc |
557 |
Q |
| |
|
| |||||||||||| ||||||||| | |||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
8417301 |
agaatcttttctcttgatcacttcagcgacttcctgcatttccatttctaattctttactccatcc |
8417366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 275 - 515
Target Start/End: Original strand, 8368120 - 8368357
Alignment:
| Q |
275 |
tatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagccaagagaggaacaaatgcagccaaaga |
374 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| | ||| || | | ||||| || |
|
|
| T |
8368120 |
tatacatttcagaaaccataccaacttgtccaccatgctcaaaagaattaacagcagtagccaatgctccagccataacaggtactatagatgccaatga |
8368219 |
T |
|
| Q |
375 |
actaccattaccaataaatgtagatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgctatgtttcca |
474 |
Q |
| |
|
||| | ||||| |||||| || || | |||||||||||| ||||| ||||| |||||||| ||||| |||| |||||||||||| | | |||||| |
|
|
| T |
8368220 |
---accttgaccaacaaatgtggaccccacagctgcaattccagtgagtaatggtcctgcaatagccaatgtcttatttatcttcaacaccaagtttcct |
8368316 |
T |
|
| Q |
475 |
agtctgtcataatcttcaacatcttttctctttatcacttc |
515 |
Q |
| |
|
| ||| ||||||||||| | |||||||||||| || ||||| |
|
|
| T |
8368317 |
aatctctcataatcttccatatcttttctcttcataacttc |
8368357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 275 - 515
Target Start/End: Complemental strand, 8401290 - 8401053
Alignment:
| Q |
275 |
tatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagccaagagaggaacaaatgcagccaaaga |
374 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| | ||| || | | ||||| || |
|
|
| T |
8401290 |
tatacatttcagaaaccataccaacttgtccaccatgctcaaaagaattaacagcagtagccaatgctccagccataacaggtactatagatgccaatga |
8401191 |
T |
|
| Q |
375 |
actaccattaccaataaatgtagatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgctatgtttcca |
474 |
Q |
| |
|
||| | ||||| |||||| || || | |||||||||||| ||||| ||||| |||||||| ||||| |||| |||||||||||| | | |||||| |
|
|
| T |
8401190 |
---accttgaccaacaaatgtggaccccacagctgcaattccagtgagtaatggtcctgcaatagccaatgtcttatttatcttcaacaccaagtttcct |
8401094 |
T |
|
| Q |
475 |
agtctgtcataatcttcaacatcttttctctttatcacttc |
515 |
Q |
| |
|
| ||| ||||||||||| | |||||||||||| || ||||| |
|
|
| T |
8401093 |
aatctctcataatcttccatatcttttctcttcataacttc |
8401053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 275 - 515
Target Start/End: Complemental strand, 8422867 - 8422630
Alignment:
| Q |
275 |
tatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagccaagagaggaacaaatgcagccaaaga |
374 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| | ||| || | | ||||| || |
|
|
| T |
8422867 |
tatacatttcagaaaccataccaacttgtccaccatgctcaaaagaattaacagcagtagccaatgctccagccataacaggtactatagatgccaatga |
8422768 |
T |
|
| Q |
375 |
actaccattaccaataaatgtagatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgctatgtttcca |
474 |
Q |
| |
|
||| | ||||| |||||| || || | |||||||||||| ||||| ||||| |||||||| ||||| |||| |||||||||||| | | |||||| |
|
|
| T |
8422767 |
---accttgaccaacaaatgtggaccccacagctgcaattccagtgagtaatggtcctgcaatagccaatgtcttatttatcttcaacaccaagtttcct |
8422671 |
T |
|
| Q |
475 |
agtctgtcataatcttcaacatcttttctctttatcacttc |
515 |
Q |
| |
|
| ||| ||||||||||| | |||||||||||| || ||||| |
|
|
| T |
8422670 |
aatctctcataatcttccatatcttttctcttcataacttc |
8422630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 938 - 1074
Target Start/End: Complemental strand, 8375475 - 8375339
Alignment:
| Q |
938 |
gcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgca |
1037 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| || || ||||| || |||||| | ||||| |||||||| |||||||||||||| ||||||| |
|
|
| T |
8375475 |
gcaacaccagacatggttgtagcagtaagagtaatcatgttgatggagttcaagagaagagtgttccaattgttacgctgttcgccaatgttttgatgca |
8375376 |
T |
|
| Q |
1038 |
tttctattctgtctgatacagcttccaagactgcata |
1074 |
Q |
| |
|
|||| | ||| || || || |||||||||| |||||| |
|
|
| T |
8375375 |
tttcaactctatcagaaactgcttccaagattgcata |
8375339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 938 - 1074
Target Start/End: Original strand, 8439628 - 8439764
Alignment:
| Q |
938 |
gcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgca |
1037 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| || || ||||| || |||||| | ||||| ||| |||| |||||||||||||| ||||||| |
|
|
| T |
8439628 |
gcaacaccagacatggttgtagcagtaagagtaatcatgttgatggagttcaagagaagagtgttccaattgctacgctgttcgccaatgttttgatgca |
8439727 |
T |
|
| Q |
1038 |
tttctattctgtctgatacagcttccaagactgcata |
1074 |
Q |
| |
|
|||| | ||| || || || |||||||||| |||||| |
|
|
| T |
8439728 |
tttcaactctatcagaaactgcttccaagattgcata |
8439764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 962 - 1081
Target Start/End: Original strand, 8368812 - 8368931
Alignment:
| Q |
962 |
gtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagctt |
1061 |
Q |
| |
|
|||||||| ||||| || || |||||||||||||| ||||||| || | ||||||||||||||||| |||||||||||||||||||| ||||||| || |
|
|
| T |
8368812 |
gtgagagtgatcatgttgatggagtttaatagaagggtattccaattatcgcgttgttcgccaatgttttgatgcatttctattctgtcggatacagatt |
8368911 |
T |
|
| Q |
1062 |
ccaagactgcatagagttga |
1081 |
Q |
| |
|
| | | ||||||||||||| |
|
|
| T |
8368912 |
caagaattgcatagagttga |
8368931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 962 - 1081
Target Start/End: Complemental strand, 8400598 - 8400479
Alignment:
| Q |
962 |
gtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagctt |
1061 |
Q |
| |
|
|||||||| ||||| || || |||||||||||||| ||||||| || | ||||||||||||||||| |||||||||||||||||||| ||||||| || |
|
|
| T |
8400598 |
gtgagagtgatcatgttgatggagtttaatagaagggtattccaattatcgcgttgttcgccaatgttttgatgcatttctattctgtcggatacagatt |
8400499 |
T |
|
| Q |
1062 |
ccaagactgcatagagttga |
1081 |
Q |
| |
|
| | | ||||||||||||| |
|
|
| T |
8400498 |
caagaattgcatagagttga |
8400479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 962 - 1081
Target Start/End: Complemental strand, 8422175 - 8422056
Alignment:
| Q |
962 |
gtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagctt |
1061 |
Q |
| |
|
|||||||| ||||| || || |||||||||||||| ||||||| || | ||||||||||||||||| |||||||||||||||||||| ||||||| || |
|
|
| T |
8422175 |
gtgagagtgatcatgttgatggagtttaatagaagggtattccaattatcgcgttgttcgccaatgttttgatgcatttctattctgtcggatacagatt |
8422076 |
T |
|
| Q |
1062 |
ccaagactgcatagagttga |
1081 |
Q |
| |
|
| | | ||||||||||||| |
|
|
| T |
8422075 |
caagaattgcatagagttga |
8422056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 785 - 852
Target Start/End: Original strand, 41119234 - 41119301
Alignment:
| Q |
785 |
ttgaacaaccttgttgcattcctttgttcctctgtgagttgagagggttggattttgttcatgataag |
852 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
41119234 |
ttgaacattcttgtagcattcctttgttcctctgtgagttgagagggttggggtttgttcatgataag |
41119301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 8403793 - 8403845
Alignment:
| Q |
275 |
tatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaaca |
327 |
Q |
| |
|
||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
8403793 |
tatacatctcaaacaccataccaacttgtcctccatgctcaaaagtattaaca |
8403845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 803 - 916
Target Start/End: Original strand, 8404329 - 8404444
Alignment:
| Q |
803 |
ttcctttgttcctctgtgagttgagagggttggattttgttcatgataagcaataatccagtggcagcagagaataaaagagcagag--gacagtttcat |
900 |
Q |
| |
|
||||||||||| |||| ||||| || ||||||||||||||||| | ||| |||| ||||||||| ||||| ||||| | ||||||| || ||||||| |
|
|
| T |
8404329 |
ttcctttgttcttctgcaagttgtgaaggttggattttgttcatcacaagtaatattccagtggcggcagaaaataacatagcagagaagatagtttcaa |
8404428 |
T |
|
| Q |
901 |
agccataagtggtgca |
916 |
Q |
| |
|
||||| ||| |||||| |
|
|
| T |
8404429 |
agccagaaggggtgca |
8404444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 785 - 888
Target Start/End: Original strand, 8368638 - 8368741
Alignment:
| Q |
785 |
ttgaacaaccttgttgcattcctttgttcctctgtgagttgagagggttggattttgttcatgataagcaataatccagtggcagcagagaataaaagag |
884 |
Q |
| |
|
|||||||| ||||||||||| ||||| ||||| | ||||| || |||||||||||||||||||||| || | ||||| | ||| ||||||||||| | |
|
|
| T |
8368638 |
ttgaacaatcttgttgcatttctttgctcctcagcaagttgtgaaggttggattttgttcatgataattaacataccagtagaagctgagaataaaagtg |
8368737 |
T |
|
| Q |
885 |
caga |
888 |
Q |
| |
|
|||| |
|
|
| T |
8368738 |
caga |
8368741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 785 - 851
Target Start/End: Complemental strand, 8400772 - 8400706
Alignment:
| Q |
785 |
ttgaacaaccttgttgcattcctttgttcctctgtgagttgagagggttggattttgttcatgataa |
851 |
Q |
| |
|
|||||||| ||||||||||| ||||| ||||| | ||||| || |||||||||||||||||||||| |
|
|
| T |
8400772 |
ttgaacaatcttgttgcatttctttgctcctcagcaagttgtgaaggttggattttgttcatgataa |
8400706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 403 - 517
Target Start/End: Original strand, 8403918 - 8404032
Alignment:
| Q |
403 |
atagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgctatgtttccaagtctgtcataatcttcaacatcttttc |
502 |
Q |
| |
|
||||||||||||||||| | ||| || ||| |||||| ||||||||||| ||||| || || || || || | ||| |||||||| |||| |||||||| |
|
|
| T |
8403918 |
atagctgcaattcctgttaacaaaggtcctaaaattgctaaactcttgttaatctttaatgcaatattccctaatctctcataatcctcaatatcttttc |
8404017 |
T |
|
| Q |
503 |
tctttatcacttcaa |
517 |
Q |
| |
|
|||| | |||||||| |
|
|
| T |
8404018 |
tcttcaccacttcaa |
8404032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 945 - 1079
Target Start/End: Original strand, 8404470 - 8404604
Alignment:
| Q |
945 |
cagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctat |
1044 |
Q |
| |
|
||||||| |||| ||| ||||| || ||||| || || |||||||||| ||| | ||||| |||| |||||||| || | ||| | ||||||||| || |
|
|
| T |
8404470 |
cagacattgttgaagctgtgagtgttatcatgttgatggagtttaataaaagcgtgttccaattgtcacgttgttgtcctaagtttttatgcatttcaat |
8404569 |
T |
|
| Q |
1045 |
tctgtctgatacagcttccaagactgcatagagtt |
1079 |
Q |
| |
|
||||||||||||||| ||| | | ||||||||||| |
|
|
| T |
8404570 |
tctgtctgatacagcctccgaaattgcatagagtt |
8404604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 785 - 851
Target Start/End: Complemental strand, 8422349 - 8422283
Alignment:
| Q |
785 |
ttgaacaaccttgttgcattcctttgttcctctgtgagttgagagggttggattttgttcatgataa |
851 |
Q |
| |
|
|||||||| ||||||||||| ||||| ||||| | ||||| || |||||||||||||||||||||| |
|
|
| T |
8422349 |
ttgaacaatcttgttgcatttctttgctcctcagcaagttgtgaaggttggattttgttcatgataa |
8422283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 663 - 720
Target Start/End: Original strand, 8404183 - 8404240
Alignment:
| Q |
663 |
ctcctaataatggaagtggatatgctttgtcaagggccaaaaccttttccattgcatc |
720 |
Q |
| |
|
|||||||||| ||||||||||| ||||| ||||| ||||||||||| || |||||||| |
|
|
| T |
8404183 |
ctcctaataaaggaagtggataggctttatcaagagccaaaaccttctcaattgcatc |
8404240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 8401418 - 8401363
Alignment:
| Q |
147 |
acttcttcccaactgcaaagccattttcatttcaaatagctctccattttctcttt |
202 |
Q |
| |
|
|||||||||||| | |||||||| ||| |||||||||| |||||||||||||||| |
|
|
| T |
8401418 |
acttcttcccaatttcaaagccaatttaatttcaaataaatctccattttctcttt |
8401363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 8403612 - 8403737
Alignment:
| Q |
94 |
ccttccattcgataagcagctgattttgatgcaagttctctcagctctgatacacttcttcccaactgcaaagccattttcatttcaaatagctctccat |
193 |
Q |
| |
|
|||||||| ||||| || | |||||||| ||||| ||||||| || ||||||||||||||| ||||| || || ||||| ||||| | ||| ||| |
|
|
| T |
8403612 |
ccttccatccgatagacatcagattttgaggcaagctctctcatctgcattacacttcttcccaattgcaatgcaatcttcatctcaaacacctcatcat |
8403711 |
T |
|
| Q |
194 |
tttctcttttctctaaatctttctct |
219 |
Q |
| |
|
|||||||||| | |||||||||||| |
|
|
| T |
8403712 |
tttctcttttattcaaatctttctct |
8403737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1738 (Bit Score: 149; Significance: 4e-78; HSPs: 1)
Name: scaffold1738
Description:
Target: scaffold1738; HSP #1
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 177 - 1
Alignment:
| Q |
67 |
ttgctggcaaattcatctatgtcaacaccttccattcgataagcagctgattttgatgcaagttctctcagctctgatacacttcttcccaactgcaaag |
166 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
177 |
ttgctggcaaattcatctatgtcaacaccttcgatgcgacaagaagctgattttgatgcaagttccctcagctctgatacacttcttcccaattgcaaag |
78 |
T |
|
| Q |
167 |
ccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaatcgaagtt |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
77 |
ccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaattgaagtt |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 91; Significance: 2e-43; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 406 - 560
Target Start/End: Original strand, 55336242 - 55336396
Alignment:
| Q |
406 |
gctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgctatgtttccaagtctgtcataatcttcaacatcttttctct |
505 |
Q |
| |
|
||||||||||| ||||| ||||| ||||| ||||||| ||||||||| |||||||| ||||| ||||||||||| ||||| ||||||| ||||| |||| |
|
|
| T |
55336242 |
gctgcaattccagtgagtaatggacctgctattgccatactcttgttaatcttcaatgctatatttccaagtctctcatagtcttcaatgtctttactct |
55336341 |
T |
|
| Q |
506 |
ttatcacttcaacaacttccctcatttccatttctaattcttcactccatccatt |
560 |
Q |
| |
|
||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55336342 |
ttacaacttcaataacttccctcatttccatttctaattcttcactccatccatt |
55336396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 73 - 560
Target Start/End: Original strand, 55330474 - 55330958
Alignment:
| Q |
73 |
gcaaattcatctatgtcaacaccttccattcgataagcagctgattttgatgcaagttctctcagctctgatacacttcttcccaactgcaaagccattt |
172 |
Q |
| |
|
||||||||||| | |||| |||| ||||||| ||| | |||||||||| ||||| ||||||| ||| || ||| ||||||||||| ||||||||||| |
|
|
| T |
55330474 |
gcaaattcatcaacatcaattcctttcattcgacaagaacctgattttgaagcaagctctctcatctcagaaacatttcttcccaacatcaaagccattt |
55330573 |
T |
|
| Q |
173 |
tcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaatcgaagtttctaacaagttgaagaaaccagaagaagt |
272 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||| |||||||||||| |||| ||| |||| | ||| |||| || | ||| ||| | || | |
|
|
| T |
55330574 |
tcatttcaaataactctccattttctctcatctcaaaatctttctcttccaatgtttcatcaacagtctcttccaacagcttaaggaatccaccacaatt |
55330673 |
T |
|
| Q |
273 |
tttatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagccaagagaggaacaaatgcagccaaa |
372 |
Q |
| |
|
| ||||||||||||| ||||| |||| |||||||||||| ||||||| ||| || ||| | | ||||||||||||| | || ||| | || || | | |
|
|
| T |
55330674 |
tctatacatttcaaataccataccaatttgtccaccatgttcaaaagcattcactacagcacctaatgaaccagccattaaagcaactatagctgcaaca |
55330773 |
T |
|
| Q |
373 |
gaactaccattaccaataaatgtagatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttatcttcaacgctatgtttc |
472 |
Q |
| |
|
||| | || || | ||||| ||| || |||||||||||||| ||||| ||||| || ||| |||| |||||||| || | ||| || ||||| |||| |
|
|
| T |
55330774 |
gaatt---gtttcctacaaatgcagaacctatagctgcaattccagtgagtaatggaccagcagttgctaaactcttattaacctttaatgctatatttc |
55330870 |
T |
|
| Q |
473 |
caagtctgtcataatcttcaacatcttttctctttatcacttcaacaacttccctcatttccatttctaattcttcactccatccatt |
560 |
Q |
| |
|
||||||| ||||||||||||| |||||| | || | ||||||| |||||| |||| |||| |||||||||| |||||||||||||| |
|
|
| T |
55330871 |
caagtctttcataatcttcaatatctttcattttcacaacttcaataacttctctcaattccttttctaattcctcactccatccatt |
55330958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 55335899 - 55336051
Alignment:
| Q |
66 |
tttgctggcaaattcatctatgtcaacaccttccattcgataagcagctgattttgatgcaagttctctcagctctgatacacttcttcccaactgcaaa |
165 |
Q |
| |
|
||||||||||||||||||||| || |||||||| | | | ||||| |||||||| ||||||| ||| ||||| || ||||||||||| ||| ||| |
|
|
| T |
55335899 |
tttgctggcaaattcatctatagaaattccttccatgcaacaggcagcagattttgaagcaagttgtcttagctcagaaacacttcttcctaacatcaat |
55335998 |
T |
|
| Q |
166 |
gccattttcatttcaaatagctctccattttctcttttctctaaatctttctc |
218 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||| || ||||||||||| |
|
|
| T |
55335999 |
gccattttcatttcaaatatctcaccattttctcttttttccaaatctttctc |
55336051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 614 - 714
Target Start/End: Original strand, 55331017 - 55331117
Alignment:
| Q |
614 |
ggccaccaattagcaggctcaaattttgcagggtatttttcaagcattgctcctaataatggaagtggatatgctttgtcaagggccaaaaccttttcca |
713 |
Q |
| |
|
||||||||| |||||| | | |||||||||| ||||||||||||| | |||||||| ||||||||||| ||||||||||| |||||||| || |||| |
|
|
| T |
55331017 |
ggccaccaaacagcaggtttatattttgcaggaaatttttcaagcataacacctaataaaggaagtggataagctttgtcaagtgccaaaactttctcca |
55331116 |
T |
|
| Q |
714 |
t |
714 |
Q |
| |
|
| |
|
|
| T |
55331117 |
t |
55331117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 318
Target Start/End: Original strand, 55336108 - 55336151
Alignment:
| Q |
275 |
tatacatttcaaaaaccatgccaacttgtccaccatgctcaaaa |
318 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
55336108 |
tatacatttcaaacaccataccaacttgtccaccatgctcaaaa |
55336151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 613 - 702
Target Start/End: Original strand, 55336451 - 55336540
Alignment:
| Q |
613 |
aggccaccaattagcaggctcaaattttgcagggtatttttcaagcattgctcctaataatggaagtggatatgctttgtcaagggccaa |
702 |
Q |
| |
|
|||||||||| || ||| ||| |||||||||| | ||||||||||| |||||||| | ||||||||||| ||||||||||| ||||| |
|
|
| T |
55336451 |
aggccaccaaacagaaggttcatattttgcaggaaacttttcaagcatagctcctaacagaggaagtggataagctttgtcaagtgccaa |
55336540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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