View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9699_high_5 (Length: 247)
Name: NF9699_high_5
Description: NF9699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9699_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 6467769 - 6467543
Alignment:
| Q |
3 |
tatttactcttctcaattttatattttccctttttgaccaaaaccaactttcatatttctatccacacccgtccccaccacactatctatcacaaaccgt |
102 |
Q |
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| T |
6467769 |
tatttactcttttcaattttatattttccctttttgaccaaaaccaactttcatatttctatccacacccgtccccaccacactctctatcacaaaccgt |
6467670 |
T |
|
| Q |
103 |
gtgttgatctatttccctttccttagctcttaattccttaactgcaaagagttccaagtatatttttatcccttcatgttctcacttacttgacaagtca |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6467669 |
gtgttgatctatttccctttccttagctcttaattccttaactgcaaagagttccaagtatatttttatcccttcatgttctcacttacttgacaagtca |
6467570 |
T |
|
| Q |
203 |
catctcaaaaaattctaactactcatc |
229 |
Q |
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||||||||||||||||||||||||||| |
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| T |
6467569 |
catctcaaaaaattctaactactcatc |
6467543 |
T |
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