View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9703_high_39 (Length: 240)

Name: NF9703_high_39
Description: NF9703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9703_high_39
NF9703_high_39
[»] chr7 (4 HSPs)
chr7 (17-187)||(32548522-32548692)
chr7 (17-108)||(32547732-32547823)
chr7 (17-57)||(30915763-30915803)
chr7 (18-54)||(46251420-46251456)
[»] chr4 (6 HSPs)
chr4 (17-187)||(33370726-33370894)
chr4 (17-108)||(33369938-33370029)
chr4 (17-66)||(6246813-6246862)
chr4 (17-57)||(23383339-23383379)
chr4 (22-66)||(43079194-43079238)
chr4 (18-66)||(50710387-50710435)
[»] chr5 (7 HSPs)
chr5 (17-187)||(32944335-32944503)
chr5 (17-108)||(32943546-32943637)
chr5 (17-66)||(26712358-26712407)
chr5 (17-66)||(26982096-26982145)
chr5 (18-54)||(4555442-4555478)
chr5 (18-54)||(25075017-25075053)
chr5 (18-54)||(25132986-25133022)
[»] chr8 (3 HSPs)
chr8 (68-154)||(37562375-37562461)
chr8 (17-66)||(43972056-43972105)
chr8 (17-57)||(40450965-40451005)
[»] chr3 (4 HSPs)
chr3 (68-154)||(51421557-51421643)
chr3 (68-134)||(49287777-49287845)
chr3 (22-66)||(15450259-15450303)
chr3 (17-57)||(44406938-44406978)
[»] chr1 (3 HSPs)
chr1 (68-154)||(38931394-38931480)
chr1 (17-66)||(31788246-31788295)
chr1 (17-57)||(29334243-29334283)
[»] scaffold0189 (1 HSPs)
scaffold0189 (17-66)||(12829-12878)
[»] chr2 (6 HSPs)
chr2 (68-134)||(4386098-4386166)
chr2 (17-66)||(4976475-4976524)
chr2 (17-66)||(4994382-4994431)
chr2 (25-66)||(42369680-42369721)
chr2 (17-57)||(36390986-36391026)
chr2 (17-65)||(42370921-42370969)
[»] scaffold0071 (1 HSPs)
scaffold0071 (22-66)||(11888-11932)
[»] chr6 (1 HSPs)
chr6 (17-49)||(29290152-29290184)


Alignment Details
Target: chr7 (Bit Score: 151; Significance: 5e-80; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 32548692 - 32548522
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaactatacaccctcaacactatattattttgtcactatcttccacaagcatct 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||    
T  32548692 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaactatacaccctcaacattatattattttgtcactatcttccactaccatct 32548593  T
Q  117 ctccttcataccaaccaaactaccaccagcaacaccatcaaaatggttgtcccaactctccttcccttcac 187  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32548592 ctccttcataccaaccaacccaccaccagcaacaccatcaaaatggttgtcccaactctccttcccttcac 32548522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 32547732 - 32547823
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaactatacaccctcaacactatattattttgtcactatcttccac 108  Q
    |||| ||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||  |||||||||    
T  32547732 gttttccaccataggaaagttaatgttagccattagatcaaatagagaactatagaccctcaacactagattattttgtcatcatcttccac 32547823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 30915763 - 30915803
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaa 57  Q
    |||||||||||||||||||| ||| ||| ||||||||||||    
T  30915763 gtttcccaccatgggaaagtaaattttacccattagatcaa 30915803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 46251420 - 46251456
Alignment:
Q  18 tttcccaccatgggaaagttaatgttagccattagat 54  Q
    |||||||||||||||||||| || |||||||||||||    
T  46251420 tttcccaccatgggaaagttgattttagccattagat 46251456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 33370894 - 33370726
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaactatacaccctcaacactatattattttgtcactatcttccacaagcatct 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| | |||||    
T  33370894 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaattatacaccctcaacactagattatt--gtcactatcttccactaccatct 33370797  T
Q  117 ctccttcataccaaccaaactaccaccagcaacaccatcaaaatggttgtcccaactctccttcccttcac 187  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33370796 ctcctccataccaaccaacccaccaccagcaacaccatcaaaatggttgtcccaactctccttcccttcac 33370726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 33369938 - 33370029
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaactatacaccctcaacactatattattttgtcactatcttccac 108  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  33369938 gtttcccaccatgggaaagttaatgttagccattagatcaggtagagaactatacaccctcaacactagattattttgtaaccatcttccac 33370029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 6246813 - 6246862
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    |||||||||||||||||||||||| ||  ||||||||| | |||||||||    
T  6246813 gtttcccaccatgggaaagttaattttgaccattagataaggtagagaac 6246862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 23383339 - 23383379
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaa 57  Q
    |||||||||||||||||||||||| ||| ||||| ||||||    
T  23383339 gtttcccaccatgggaaagttaattttatccattcgatcaa 23383379  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 43079194 - 43079238
Alignment:
Q  22 ccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    |||| |||||||||||||| ||| ||||||||||||||| |||||    
T  43079194 ccacaatgggaaagttaattttatccattagatcaagtaaagaac 43079238  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 50710435 - 50710387
Alignment:
Q  18 tttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    ||||||||||||||||||| ||| ||  ||||||||| |||||||||||    
T  50710435 tttcccaccatgggaaagtaaatattgaccattagataaagtagagaac 50710387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 32944503 - 32944335
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaactatacaccctcaacactatattattttgtcactatcttccacaagcatct 116  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||||||| | |||||    
T  32944503 gtttcccaccatggaaaagttaatgttagccattagattaagtagagaactatacaccctcaacactagattatt--gtcactatcttccactaccatct 32944406  T
Q  117 ctccttcataccaaccaaactaccaccagcaacaccatcaaaatggttgtcccaactctccttcccttcac 187  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32944405 ctcctccataccaaccaacccaccaccagcaacaccatcaaaatggttgtcccaactctccttcccttcac 32944335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 32943546 - 32943637
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaactatacaccctcaacactatattattttgtcactatcttccac 108  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  32943546 gtttcccaccatgggaaagttaatgttagccattagatcaggtagagaactatacaccctcaacactagattattttgtaaccatcttccac 32943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 26712407 - 26712358
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    ||||||||||||||||||| |||| ||| |||| |||||||||| |||||    
T  26712407 gtttcccaccatgggaaagctaattttaaccatcagatcaagtaaagaac 26712358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 26982145 - 26982096
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    ||||||||||||||||||| |||| ||| |||| |||||||||| |||||    
T  26982145 gtttcccaccatgggaaagctaattttaaccatcagatcaagtaaagaac 26982096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 4555478 - 4555442
Alignment:
Q  18 tttcccaccatgggaaagttaatgttagccattagat 54  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  4555478 tttcccatcatgtgaaagttaatgttagccattagat 4555442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 25075053 - 25075017
Alignment:
Q  18 tttcccaccatgggaaagttaatgttagccattagat 54  Q
    ||||||||||||||||||||||  |||||||||||||    
T  25075053 tttcccaccatgggaaagttaactttagccattagat 25075017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 25133022 - 25132986
Alignment:
Q  18 tttcccaccatgggaaagttaatgttagccattagat 54  Q
    ||||||||||||||||||||||  |||||||||||||    
T  25133022 tttcccaccatgggaaagttaactttagccattagat 25132986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 37562375 - 37562461
Alignment:
Q  68 atacaccctcaacactatattattttgtcactatcttccacaagcatctc--tccttcataccaaccaaactaccaccagcaacaccat 154  Q
    |||||| ||||||||||||||  |||||||||||||||||| | ||||||  |||||||| || ||||| | |||||||||||||||||    
T  37562375 atacactctcaacactatatt--tttgtcactatcttccactaccatctctctccttcatccccaccaacccaccaccagcaacaccat 37562461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 43972105 - 43972056
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    ||||||||| |||||||||||||| ||| ||||||||| || ||||||||    
T  43972105 gtttcccactatgggaaagttaattttaaccattagataaaatagagaac 43972056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 40451005 - 40450965
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaa 57  Q
    |||||||||||||||||||| ||| ||| ||||||||||||    
T  40451005 gtttcccaccatgggaaagtaaattttaaccattagatcaa 40450965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 154
Target Start/End: Complemental strand, 51421643 - 51421557
Alignment:
Q  68 atacaccctcaacactatattattttgtcactatcttccacaagcatctctc--cttcataccaaccaaactaccaccagcaacaccat 154  Q
    |||||| ||||||||||||||  |||||||||||||||||| | ||||||||  |||||| || ||||| | |||||||||||||||||    
T  51421643 atacactctcaacactatatt--tttgtcactatcttccactaccatctctctccttcatccccaccaacccaccaccagcaacaccat 51421557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 49287777 - 49287845
Alignment:
Q  68 atacaccctcaacactatattattttgtcactatcttccacaagcat--ctctccttcataccaaccaa 134  Q
    |||||| |||||||| | ||| ||||||||||||||||||||| |||  ||||||||||| || |||||    
T  49287777 atacactctcaacaccaaatttttttgtcactatcttccacaaccatcactctccttcatccctaccaa 49287845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 15450259 - 15450303
Alignment:
Q  22 ccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    ||||||||||||||||||| ||  ||||||||| |||||||||||    
T  15450259 ccaccatgggaaagttaatcttgaccattagattaagtagagaac 15450303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 44406978 - 44406938
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaa 57  Q
    |||||||||||||||||||| ||| ||| ||||||||||||    
T  44406978 gtttcccaccatgggaaagtaaattttacccattagatcaa 44406938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 38931394 - 38931480
Alignment:
Q  68 atacaccctcaacactatattattttgtcactatcttccacaagcatctc--tccttcataccaaccaaactaccaccagcaacaccat 154  Q
    |||||| ||||||||||||||  |||||||||||||||||| | ||||||  |||||||| || ||||| | |||||||||||||||||    
T  38931394 atacactctcaacactatatt--tttgtcactatcttccactaccatctctctccttcatccccaccaacccaccaccagcaacaccat 38931480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 31788295 - 31788246
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    |||||||||||||||||||||||| ||| ||||||||| || ||||||||    
T  31788295 gtttcccaccatgggaaagttaattttaaccattagataaaatagagaac 31788246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 29334243 - 29334283
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaa 57  Q
    |||||||||||||||||||| ||| ||| ||||||||||||    
T  29334243 gtttcccaccatgggaaagtaaattttacccattagatcaa 29334283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 12878 - 12829
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    |||||||||||||||||||||||| ||  ||||||||| || ||||||||    
T  12878 gtttcccaccatgggaaagttaattttgaccattagataaactagagaac 12829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 30; Significance: 0.00000008; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 4386166 - 4386098
Alignment:
Q  68 atacaccctcaacactatattattttgtcactatcttccacaagcat--ctctccttcataccaaccaa 134  Q
    |||||| |||||||||| | | ||||||||||||||||||||| |||  ||||||||||| || |||||    
T  4386166 atacactctcaacactagaattttttgtcactatcttccacaaccatcactctccttcatccccaccaa 4386098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 4976524 - 4976475
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    ||||||||| |||||||||||||| ||| ||||||||| || ||||||||    
T  4976524 gtttcccactatgggaaagttaattttaaccattagataaaatagagaac 4976475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 4994431 - 4994382
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    ||||||||| |||||||||||||| ||| ||||||||| || ||||||||    
T  4994431 gtttcccactatgggaaagttaattttaaccattagataaaatagagaac 4994382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 42369680 - 42369721
Alignment:
Q  25 ccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    |||||||||||| ||| ||||||||||||| |||||||||||    
T  42369680 ccatgggaaagtaaatattagccattagataaagtagagaac 42369721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 36390986 - 36391026
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaa 57  Q
    |||||||||||||||||||| ||| ||| ||||||||||||    
T  36390986 gtttcccaccatgggaaagtaaattttaaccattagatcaa 36391026  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 42370969 - 42370921
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccattagatcaagtagagaa 65  Q
    |||||||||||||||||||| ||| || |||||||||| |||| |||||    
T  42370969 gtttcccaccatgggaaagtaaatattggccattagataaagtggagaa 42370921  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 11932 - 11888
Alignment:
Q  22 ccaccatgggaaagttaatgttagccattagatcaagtagagaac 66  Q
    ||||||||||||||||||| ||  ||||||||| |||||||||||    
T  11932 ccaccatgggaaagttaatcttgaccattagattaagtagagaac 11888  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 29290152 - 29290184
Alignment:
Q  17 gtttcccaccatgggaaagttaatgttagccat 49  Q
    |||||||||||||||||||||||||||| ||||    
T  29290152 gtttcccaccatgggaaagttaatgttaaccat 29290184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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